View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19526_high_6 (Length: 243)
Name: NF19526_high_6
Description: NF19526
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19526_high_6 |
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Alignment Details
Target: chr5 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 18 - 226
Target Start/End: Original strand, 38157052 - 38157259
Alignment:
| Q |
18 |
ctaacaacctattattttctacaatttgtgattgacaatactattgtttttatgacaggacgtaaaaataggcatgcgtggataaaagacttaatattca |
117 |
Q |
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| T |
38157052 |
ctaacaacctattattttctacaatttgtgattgacaatactattgtttttatgacaggacgtaaaaataggcatgcgtggataaaagacttaatattca |
38157151 |
T |
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| Q |
118 |
atggcttgaataataatagtacgtactaatatgaattgtggaaataacagttttcgtaaagtttcttctttttcttccctgaccccttcaaagaggatcg |
217 |
Q |
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|||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38157152 |
atggcttgaataataataata-gtcctaatatgaattgtggaaataacagttttcgtaaagtttcttctttttcttccctgaccccttcaaagaggatcg |
38157250 |
T |
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| Q |
218 |
tgtttcatc |
226 |
Q |
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||||||||| |
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| T |
38157251 |
tgtttcatc |
38157259 |
T |
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