View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19527_low_8 (Length: 202)
Name: NF19527_low_8
Description: NF19527
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19527_low_8 |
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Alignment Details
Target: chr3 (Bit Score: 77; Significance: 6e-36; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 18 - 111
Target Start/End: Complemental strand, 33881742 - 33881645
Alignment:
| Q |
18 |
gaggcatacctaagttgaatgaactgctcgaagaaa----cacgatggcaacagaagcctcctgctgttgaagagaaaatacatgagtatcgtcgagg |
111 |
Q |
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| T |
33881742 |
gaggcatacctaagttgaatgaactgctcgaagaaagaaacacgatggcaacagaagcctcctgctgttgaagagaaaatacatgagtaacgtcgagg |
33881645 |
T |
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