View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19528_low_13 (Length: 264)

Name: NF19528_low_13
Description: NF19528
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19528_low_13
NF19528_low_13
[»] chr7 (13 HSPs)
chr7 (1-245)||(19130180-19130424)
chr7 (48-96)||(26850742-26850790)
chr7 (47-88)||(5257580-5257621)
chr7 (48-79)||(7245951-7245982)
chr7 (46-93)||(28613244-28613291)
chr7 (54-96)||(28845553-28845595)
chr7 (47-96)||(6894312-6894361)
chr7 (48-81)||(19206815-19206848)
chr7 (48-93)||(24942509-24942554)
chr7 (48-93)||(37898484-37898529)
chr7 (48-92)||(3151569-3151613)
chr7 (48-92)||(15268551-15268595)
chr7 (48-92)||(31773535-31773579)
[»] chr5 (9 HSPs)
chr5 (48-93)||(7430132-7430177)
chr5 (48-80)||(17755235-17755267)
chr5 (61-93)||(34114381-34114413)
chr5 (48-96)||(41894428-41894476)
chr5 (48-91)||(40433610-40433653)
chr5 (51-96)||(33216238-33216283)
chr5 (46-74)||(7477554-7477582)
chr5 (48-92)||(17501073-17501117)
chr5 (48-92)||(39994683-39994727)
[»] chr1 (6 HSPs)
chr1 (48-109)||(1118907-1118967)
chr1 (50-96)||(15956889-15956935)
chr1 (58-91)||(375987-376020)
chr1 (48-93)||(9694424-9694469)
chr1 (51-96)||(44853547-44853592)
chr1 (48-96)||(15190879-15190927)
[»] chr6 (12 HSPs)
chr6 (9-89)||(19390962-19391041)
chr6 (49-111)||(26494405-26494466)
chr6 (48-92)||(34881728-34881772)
chr6 (48-79)||(26373111-26373142)
chr6 (54-93)||(26693131-26693170)
chr6 (48-91)||(33529355-33529398)
chr6 (48-82)||(5565470-5565504)
chr6 (48-78)||(9053923-9053953)
chr6 (22-96)||(9194409-9194482)
chr6 (50-127)||(33532495-33532571)
chr6 (48-92)||(9163771-9163815)
chr6 (45-89)||(10334656-10334700)
[»] chr3 (13 HSPs)
chr3 (52-96)||(11314409-11314453)
chr3 (48-89)||(2990984-2991025)
chr3 (52-96)||(32954271-32954315)
chr3 (48-92)||(50402655-50402699)
chr3 (48-95)||(14794296-14794343)
chr3 (48-91)||(51616394-51616437)
chr3 (46-92)||(8936754-8936800)
chr3 (47-93)||(24830151-24830197)
chr3 (48-94)||(53855746-53855792)
chr3 (48-94)||(54375417-54375463)
chr3 (47-88)||(2101659-2101700)
chr3 (63-92)||(7877789-7877818)
chr3 (48-93)||(21754252-21754297)
[»] chr8 (8 HSPs)
chr8 (48-85)||(41971615-41971652)
chr8 (48-96)||(3644535-3644583)
chr8 (48-92)||(45371100-45371144)
chr8 (52-94)||(8464025-8464067)
chr8 (48-93)||(13560491-13560536)
chr8 (48-93)||(21226939-21226984)
chr8 (48-96)||(5510098-5510146)
chr8 (47-79)||(31809797-31809829)
[»] chr4 (11 HSPs)
chr4 (48-93)||(34417347-34417392)
chr4 (48-92)||(33792182-33792226)
chr4 (52-123)||(4145259-4145329)
chr4 (48-91)||(4762553-4762596)
chr4 (13-96)||(13485319-13485401)
chr4 (48-110)||(27722414-27722475)
chr4 (49-90)||(13458792-13458833)
chr4 (48-93)||(26275542-26275587)
chr4 (48-93)||(34416921-34416966)
chr4 (48-93)||(34581593-34581638)
chr4 (48-81)||(56049791-56049824)
[»] chr2 (7 HSPs)
chr2 (48-96)||(18103736-18103784)
chr2 (52-92)||(33623680-33623720)
chr2 (48-96)||(35199591-35199639)
chr2 (48-91)||(45071627-45071670)
chr2 (47-93)||(28804350-28804396)
chr2 (17-74)||(42616713-42616769)
chr2 (17-81)||(6642464-6642528)
[»] scaffold0194 (1 HSPs)
scaffold0194 (47-92)||(13801-13846)


Alignment Details
Target: chr7 (Bit Score: 233; Significance: 1e-129; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 19130180 - 19130424
Alignment:
Q  1 gttcaaaatctgctatgctatagtgctataatgtcgctataacctattatttgacaacactttgtactaaatagcgtattgtggaacaatagcaataacg 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19130180 gttcaaaatctgctatgctatagtgctataatgtcgctgtaacctattatttgacaacactttgtactaaatagcgtattgtggaacaatagcaataacg 19130279  T
Q  101 ttcaaattctgatacgctatagcgctacaacattgattgatcatacttcattgatattcagtatttcaagagaacagtagtttttgcaaacaaaacataa 200  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19130280 ttcaaattctgatacgctatagtgctacaacattgattgatcatacttcattgatattcagtatttcaagagaacaatagtttttgcaaacaaaacataa 19130379  T
Q  201 atatatttcgaaagaaacagatatttaacagattcttgtcaaatg 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  19130380 atatatttcgaaagaaacagatatttaacagattcttgtcaaatg 19130424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 26850742 - 26850790
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattgtggaacaatagcaat 96  Q
    |||||||| |||||||||||||||||||||||||| |||| ||||||||    
T  26850742 tatttgactacactttgtactaaatagcgtattgttgaactatagcaat 26850790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 88
Target Start/End: Complemental strand, 5257621 - 5257580
Alignment:
Q  47 ttatttgacaacactttgtactaaatagcgtattgtggaaca 88  Q
    ||||||||||||| ||||||||| ||||||||||||||||||    
T  5257621 ttatttgacaacattttgtactatatagcgtattgtggaaca 5257580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 79
Target Start/End: Original strand, 7245951 - 7245982
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtat 79  Q
    ||||||||||||||||||||||||||||||||    
T  7245951 tatttgacaacactttgtactaaatagcgtat 7245982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 93
Target Start/End: Original strand, 28613244 - 28613291
Alignment:
Q  46 attatttgacaacactttgtactaaatagcgtattgtggaacaatagc 93  Q
    |||||||||||||| ||||||||| |||| |||| |||||||||||||    
T  28613244 attatttgacaacattttgtactatatagtgtatcgtggaacaatagc 28613291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 96
Target Start/End: Complemental strand, 28845595 - 28845553
Alignment:
Q  54 acaacactttgtactaaatagcgtattgtggaacaatagcaat 96  Q
    ||||||||||||| |||||| ||||| ||||||||||||||||    
T  28845595 acaacactttgtagtaaataacgtatcgtggaacaatagcaat 28845553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 6894312 - 6894361
Alignment:
Q  47 ttatttgacaacactttgtactaaatagcgtattgtggaacaatagcaat 96  Q
    ||||||||||||| |||||||| ||||| |||||||  ||||||||||||    
T  6894312 ttatttgacaacattttgtacttaatagtgtattgttaaacaatagcaat 6894361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 81
Target Start/End: Complemental strand, 19206848 - 19206815
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattg 81  Q
    |||||||||| |||||||||||||||||||||||    
T  19206848 tatttgacaaaactttgtactaaatagcgtattg 19206815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 24942554 - 24942509
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattgtggaacaatagc 93  Q
    |||||||||||| |||||||||| ||||||||  ||||||||||||    
T  24942554 tatttgacaacattttgtactaattagcgtatcatggaacaatagc 24942509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 37898529 - 37898484
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattgtggaacaatagc 93  Q
    |||||||||| ||| ||| |||||| ||||||||||||||||||||    
T  37898529 tatttgacaatactctgtgctaaatggcgtattgtggaacaatagc 37898484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 3151613 - 3151569
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattgtggaacaatag 92  Q
    |||||||||||| ||||||||| |||| ||||||| |||||||||    
T  3151613 tatttgacaacattttgtactatatagagtattgttgaacaatag 3151569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 15268595 - 15268551
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattgtggaacaatag 92  Q
    ||||||||| |||||||||||||| |||||||||  |||||||||    
T  15268595 tatttgacagcactttgtactaaacagcgtattgcagaacaatag 15268551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 31773579 - 31773535
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattgtggaacaatag 92  Q
    ||||| |||||| |||| |||||||||||||| ||||||||||||    
T  31773579 tatttaacaacattttgaactaaatagcgtatcgtggaacaatag 31773535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000002; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 7430177 - 7430132
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattgtggaacaatagc 93  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||    
T  7430177 tatttgacaacatcttgtactaaatagcgtattgtggaacaatagc 7430132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 80
Target Start/End: Original strand, 17755235 - 17755267
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtatt 80  Q
    |||||||||||||||||||||||||||||||||    
T  17755235 tatttgacaacactttgtactaaatagcgtatt 17755267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 34114413 - 34114381
Alignment:
Q  61 tttgtactaaatagcgtattgtggaacaatagc 93  Q
    |||||||||||||||||||||||||||||||||    
T  34114413 tttgtactaaatagcgtattgtggaacaatagc 34114381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 41894476 - 41894428
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattgtggaacaatagcaat 96  Q
    ||||||||||||||||||| ||||||||||||||  |||||||| ||||    
T  41894476 tatttgacaacactttgtagtaaatagcgtattgcagaacaataacaat 41894428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 91
Target Start/End: Complemental strand, 40433653 - 40433610
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattgtggaacaata 91  Q
    ||||||||||||||||||||||||||  |||| |||||||||||    
T  40433653 tatttgacaacactttgtactaaataatgtatcgtggaacaata 40433610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 96
Target Start/End: Complemental strand, 33216283 - 33216238
Alignment:
Q  51 ttgacaacactttgtactaaatagcgtattgtggaacaatagcaat 96  Q
    |||||||||||||||| |||||||||||| | ||||||||| ||||    
T  33216283 ttgacaacactttgtattaaatagcgtatagcggaacaataacaat 33216238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 74
Target Start/End: Original strand, 7477554 - 7477582
Alignment:
Q  46 attatttgacaacactttgtactaaatag 74  Q
    |||||||||||||||||||||||||||||    
T  7477554 attatttgacaacactttgtactaaatag 7477582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 17501073 - 17501117
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattgtggaacaatag 92  Q
    ||||||||| |||||||||||||| |||||||||  |||||||||    
T  17501073 tatttgacagcactttgtactaaacagcgtattgcagaacaatag 17501117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 39994727 - 39994683
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattgtggaacaatag 92  Q
    |||||||||||||||||||||| || || |||||| |||||||||    
T  39994727 tatttgacaacactttgtactatattgcatattgttgaacaatag 39994683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 1118967 - 1118907
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattgtggaacaatagcaataacgttcaaattc 109  Q
    ||||||||||||||||||||||||||| ||||||| ||| ||||||||| | ||||||||||    
T  1118967 tatttgacaacactttgtactaaatagagtattgtagaaaaatagcaatta-gttcaaattc 1118907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 15956935 - 15956889
Alignment:
Q  50 tttgacaacactttgtactaaatagcgtattgtggaacaatagcaat 96  Q
    |||||||||||||||||||||||||||||| | ||||||||| ||||    
T  15956935 tttgacaacactttgtactaaatagcgtatggcggaacaataacaat 15956889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 91
Target Start/End: Complemental strand, 376020 - 375987
Alignment:
Q  58 cactttgtactaaatagcgtattgtggaacaata 91  Q
    |||||||||||||||||||||||| |||||||||    
T  376020 cactttgtactaaatagcgtattgcggaacaata 375987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 9694469 - 9694424
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattgtggaacaatagc 93  Q
    |||||||| ||| ||||| |||||||| ||||||||||||||||||    
T  9694469 tatttgaccacattttgttctaaatagtgtattgtggaacaatagc 9694424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 96
Target Start/End: Complemental strand, 44853592 - 44853547
Alignment:
Q  51 ttgacaacactttgtactaaatagcgtattgtggaacaatagcaat 96  Q
    |||| |||||| |||||||||||| |||||||||||||||| ||||    
T  44853592 ttgataacactctgtactaaatagggtattgtggaacaatatcaat 44853547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 15190927 - 15190879
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattgtggaacaatagcaat 96  Q
    |||||||||||| |||||||| ||||| |||| || |||||||||||||    
T  15190927 tatttgacaacattttgtactgaatagtgtatcgtagaacaatagcaat 15190879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000006; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 19391041 - 19390962
Alignment:
Q  9 tctgctatgctatagtgctataatgtcgctataacctattatttgacaacactttgtactaaatagcgtattgtggaacaa 89  Q
    |||||||||||| |||||||||  | | ||||||| |  |||||||||| ||||||||||||||||| |||||||||||||    
T  19391041 tctgctatgctacagtgctatagcgccactataac-tgctatttgacaatactttgtactaaatagcttattgtggaacaa 19390962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 111
Target Start/End: Complemental strand, 26494466 - 26494405
Alignment:
Q  49 atttgacaacactttgtactaaatagcgtattgtggaacaatagcaataacgttcaaattctg 111  Q
    ||||||||||| |||||||||||||||| ||||  ||||||||||||| | ||||||||||||    
T  26494466 atttgacaacagtttgtactaaatagcgaattgcagaacaatagcaatta-gttcaaattctg 26494405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 34881772 - 34881728
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattgtggaacaatag 92  Q
    |||||||||| ||||||||||||||||||||| ||||||| ||||    
T  34881772 tatttgacaagactttgtactaaatagcgtatcgtggaacgatag 34881728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 79
Target Start/End: Complemental strand, 26373142 - 26373111
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtat 79  Q
    ||||||||||||||||||||||||||||||||    
T  26373142 tatttgacaacactttgtactaaatagcgtat 26373111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 93
Target Start/End: Original strand, 26693131 - 26693170
Alignment:
Q  54 acaacactttgtactaaatagcgtattgtggaacaatagc 93  Q
    |||||||||||||||||||||| |||| ||||||||||||    
T  26693131 acaacactttgtactaaatagcatattatggaacaatagc 26693170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 91
Target Start/End: Original strand, 33529355 - 33529398
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattgtggaacaata 91  Q
    ||||| ||||||||||||||||||||| ||||||| ||||||||    
T  33529355 tatttaacaacactttgtactaaatagggtattgtagaacaata 33529398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 82
Target Start/End: Original strand, 5565470 - 5565504
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattgt 82  Q
    ||||||||||||||| |||||||||||||||||||    
T  5565470 tatttgacaacacttcgtactaaatagcgtattgt 5565504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 78
Target Start/End: Original strand, 9053923 - 9053953
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgta 78  Q
    |||||||||||||||||||||||||||||||    
T  9053923 tatttgacaacactttgtactaaatagcgta 9053953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 96
Target Start/End: Original strand, 9194409 - 9194482
Alignment:
Q  22 agtgctataatgtcgctataacctattatttgacaacactttgtactaaatagcgtattgtggaacaatagcaat 96  Q
    ||||| |||| | |||||||||| | |||||||||||| ||||||||||||| ||||| |  |||||||||||||    
T  9194409 agtgccataaagccgctataacc-actatttgacaacattttgtactaaataccgtatagcagaacaatagcaat 9194482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 33532495 - 33532571
Alignment:
Q  50 tttgacaacactttgtactaaatagcgtattgtggaacaatagcaataacgttcaaattctgatacgctatagcgcta 127  Q
    |||||||||| | ||||||||||||||||| ||| |||||| || ||   |||||||||||| |||||||||| ||||    
T  33532495 tttgacaacattctgtactaaatagcgtatagtgtaacaatggcgat-ttgttcaaattctgttacgctatagtgcta 33532571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 9163815 - 9163771
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattgtggaacaatag 92  Q
    |||||||||||| |||||||||||||||||||   ||||||||||    
T  9163815 tatttgacaacattttgtactaaatagcgtataacggaacaatag 9163771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 10334656 - 10334700
Alignment:
Q  45 tattatttgacaacactttgtactaaatagcgtattgtggaacaa 89  Q
    |||||||| ||| ||||||||||||||||| |||| |||||||||    
T  10334656 tattatttaacatcactttgtactaaatagtgtatcgtggaacaa 10334700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000006; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 96
Target Start/End: Complemental strand, 11314453 - 11314409
Alignment:
Q  52 tgacaacactttgtactaaatagcgtattgtggaacaatagcaat 96  Q
    |||||| |||||||||||||||||||||||| |||||||||||||    
T  11314453 tgacaatactttgtactaaatagcgtattgtagaacaatagcaat 11314409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 2990984 - 2991025
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattgtggaacaa 89  Q
    |||||||||||| ||||||||||||||||||| |||||||||    
T  2990984 tatttgacaacattttgtactaaatagcgtatcgtggaacaa 2991025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 96
Target Start/End: Complemental strand, 32954315 - 32954271
Alignment:
Q  52 tgacaacactttgtactaaatagcgtattgtggaacaatagcaat 96  Q
    |||||||| |||||||||||||||||||||||||| || ||||||    
T  32954315 tgacaacattttgtactaaatagcgtattgtggaataaaagcaat 32954271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 50402655 - 50402699
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattgtggaacaatag 92  Q
    |||||||||||||||| ||||||||||| ||||| ||||||||||    
T  50402655 tatttgacaacactttatactaaatagcatattgcggaacaatag 50402699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 14794296 - 14794343
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattgtggaacaatagcaa 95  Q
    |||||||||| | ||||||||||||||||||| |||||||| ||||||    
T  14794296 tatttgacaatattttgtactaaatagcgtatcgtggaacactagcaa 14794343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 91
Target Start/End: Original strand, 51616394 - 51616437
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattgtggaacaata 91  Q
    |||||||||||||| |||| |||||||||||| |||||||||||    
T  51616394 tatttgacaacactctgtattaaatagcgtatcgtggaacaata 51616437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 8936754 - 8936800
Alignment:
Q  46 attatttgacaacactttgtactaaatagcgtattgtggaacaatag 92  Q
    |||||||||||||||||||| ||||||| ||| |||||||| |||||    
T  8936754 attatttgacaacactttgttctaaataacgttttgtggaataatag 8936800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 24830197 - 24830151
Alignment:
Q  47 ttatttgacaacactttgtactaaatagcgtattgtggaacaatagc 93  Q
    ||||||||||||| ||| |||||||||| ||||||| ||||||||||    
T  24830197 ttatttgacaacattttatactaaatagtgtattgtagaacaatagc 24830151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 53855746 - 53855792
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattgtggaacaatagca 94  Q
    |||||||||||| ||||||||||||||| |||||  |||||||||||    
T  53855746 tatttgacaacattttgtactaaatagcatattgcagaacaatagca 53855792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 54375463 - 54375417
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattgtggaacaatagca 94  Q
    ||||||| |||| ||||||||||||||| ||||| ||||||||||||    
T  54375463 tatttgataacattttgtactaaatagcttattggggaacaatagca 54375417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 88
Target Start/End: Original strand, 2101659 - 2101700
Alignment:
Q  47 ttatttgacaacactttgtactaaatagcgtattgtggaaca 88  Q
    |||||||||||||||||||||||||||| |||| | ||||||    
T  2101659 ttatttgacaacactttgtactaaatagtgtatcgcggaaca 2101700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 92
Target Start/End: Complemental strand, 7877818 - 7877789
Alignment:
Q  63 tgtactaaatagcgtattgtggaacaatag 92  Q
    ||||||||||||||||||||||||||||||    
T  7877818 tgtactaaatagcgtattgtggaacaatag 7877789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 21754297 - 21754252
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattgtggaacaatagc 93  Q
    |||||||||||| |||||||||||||| |||| | |||||||||||    
T  21754297 tatttgacaacaatttgtactaaatagtgtatcgcggaacaatagc 21754252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000004; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 85
Target Start/End: Complemental strand, 41971652 - 41971615
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattgtgga 85  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  41971652 tatttaacaacactttgtactaaatagcgtattgtgga 41971615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 3644535 - 3644583
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattgtggaacaatagcaat 96  Q
    |||||||||||| |||||  |||||||||||||||||||||||| ||||    
T  3644535 tatttgacaacaatttgtggtaaatagcgtattgtggaacaatatcaat 3644583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 45371100 - 45371144
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattgtggaacaatag 92  Q
    |||||||||||| ||||||||||||||| ||||| ||||||||||    
T  45371100 tatttgacaacattttgtactaaatagcatattgcggaacaatag 45371144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 94
Target Start/End: Complemental strand, 8464067 - 8464025
Alignment:
Q  52 tgacaacactttgtactaaatagcgtattgtggaacaatagca 94  Q
    |||||||| ||||||||||| |||| |||||||||||||||||    
T  8464067 tgacaacattttgtactaaacagcggattgtggaacaatagca 8464025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 13560536 - 13560491
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattgtggaacaatagc 93  Q
    |||||||||||||||  |||||||||| |||||| |||||||||||    
T  13560536 tatttgacaacacttcatactaaatagagtattgcggaacaatagc 13560491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 21226984 - 21226939
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattgtggaacaatagc 93  Q
    |||||||||||| |||||||| |||||||||| | |||||||||||    
T  21226984 tatttgacaacattttgtactgaatagcgtatggaggaacaatagc 21226939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 5510146 - 5510098
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattgtggaacaatagcaat 96  Q
    ||||||||||||||||||||||||| ||||||  | |||||| ||||||    
T  5510146 tatttgacaacactttgtactaaatcgcgtatgatagaacaaaagcaat 5510098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 79
Target Start/End: Complemental strand, 31809829 - 31809797
Alignment:
Q  47 ttatttgacaacactttgtactaaatagcgtat 79  Q
    ||||||||||||| |||||||||||||||||||    
T  31809829 ttatttgacaacattttgtactaaatagcgtat 31809797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000004; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 34417392 - 34417347
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattgtggaacaatagc 93  Q
    ||||||||||||||||||||||||||||| || | |||||||||||    
T  34417392 tatttgacaacactttgtactaaatagcggatcgcggaacaatagc 34417347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 33792226 - 33792182
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattgtggaacaatag 92  Q
    ||||| |||||||||||||||||||||| |||| |||||||||||    
T  33792226 tatttaacaacactttgtactaaatagcctattatggaacaatag 33792182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 123
Target Start/End: Original strand, 4145259 - 4145329
Alignment:
Q  52 tgacaacactttgtactaaatagcgtattgtggaacaatagcaataacgttcaaattctgatacgctatagc 123  Q
    |||||||| |||||||| |||||||||| ||||||||||| ||||   |||||||||||| || ||||||||    
T  4145259 tgacaacattttgtactgaatagcgtatggtggaacaataacaat-ttgttcaaattctgctatgctatagc 4145329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 91
Target Start/End: Original strand, 4762553 - 4762596
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattgtggaacaata 91  Q
    |||||||||||| ||||||||||||||||||||| ||| |||||    
T  4762553 tatttgacaacattttgtactaaatagcgtattgcggagcaata 4762596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 13485401 - 13485319
Alignment:
Q  13 ctatgctatagtgctataatgtcgctataacctattatttgacaacactttgtactaaatagcgtattgtggaacaatagcaat 96  Q
    ||||||||||||||| ||  |  ||||||||| |||||||||||||||||  ||||||||| ||||| | |||| |||||||||    
T  13485401 ctatgctatagtgctttagcgctgctataacc-attatttgacaacacttcctactaaataccgtatcgcggaataatagcaat 13485319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 110
Target Start/End: Original strand, 27722414 - 27722475
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattgtggaacaatagcaataacgttcaaattct 110  Q
    |||||||||| | |||||||| |||||| ||| |||||||||||||||| | |||||||||||    
T  27722414 tatttgacaatattttgtacttaatagcatatcgtggaacaatagcaatta-gttcaaattct 27722475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 90
Target Start/End: Original strand, 13458792 - 13458833
Alignment:
Q  49 atttgacaacactttgtactaaatagcgtattgtggaacaat 90  Q
    ||||||||||||||| ||||||||||||||||  ||||||||    
T  13458792 atttgacaacactttatactaaatagcgtattacggaacaat 13458833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 26275542 - 26275587
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattgtggaacaatagc 93  Q
    ||||| |||| | |||||||||||||||||||| ||||||||||||    
T  26275542 tatttcacaatattttgtactaaatagcgtattttggaacaatagc 26275587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 34416966 - 34416921
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattgtggaacaatagc 93  Q
    ||||||||||||||||||||||||||| | || | |||||||||||    
T  34416966 tatttgacaacactttgtactaaatagaggatcgcggaacaatagc 34416921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 34581638 - 34581593
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattgtggaacaatagc 93  Q
    |||||||||||| |||||||||||||||||||   |||||||||||    
T  34581638 tatttgacaacattttgtactaaatagcgtatcacggaacaatagc 34581593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 81
Target Start/End: Original strand, 56049791 - 56049824
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattg 81  Q
    ||||||||||||||||||||||||| ||||||||    
T  56049791 tatttgacaacactttgtactaaattgcgtattg 56049824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000001; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 18103784 - 18103736
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattgtggaacaatagcaat 96  Q
    |||||||||||||||||||| |||||| |||||||| |||| |||||||    
T  18103784 tatttgacaacactttgtaccaaatagtgtattgtgaaacagtagcaat 18103736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 33623680 - 33623720
Alignment:
Q  52 tgacaacactttgtactaaatagcgtattgtggaacaatag 92  Q
    |||||||||||||||||||||||| ||| ||||||||||||    
T  33623680 tgacaacactttgtactaaatagcatatagtggaacaatag 33623720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 35199639 - 35199591
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattgtggaacaatagcaat 96  Q
    ||||||||||||||||| ||||||| |||||| ||| ||||||||||||    
T  35199639 tatttgacaacactttgaactaaatcgcgtatcgtgaaacaatagcaat 35199591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 91
Target Start/End: Original strand, 45071627 - 45071670
Alignment:
Q  48 tatttgacaacactttgtactaaatagcgtattgtggaacaata 91  Q
    ||||||||||||||||||||| ||| ||||||| ||||||||||    
T  45071627 tatttgacaacactttgtacttaatcgcgtattttggaacaata 45071670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 28804396 - 28804350
Alignment:
Q  47 ttatttgacaacactttgtactaaatagcgtattgtggaacaatagc 93  Q
    ||||||||||| ||||||||||||||||| |||| || |||||||||    
T  28804396 ttatttgacaatactttgtactaaatagcttattctgaaacaatagc 28804350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 42616713 - 42616769
Alignment:
Q  17 gctatagtgctataatgtcgctataacctattatttgacaacactttgtactaaatag 74  Q
    |||||||||||||| || | ||||||| |  |||||||||||||||||||||||||||    
T  42616713 gctatagtgctatagtgccactataac-tgctatttgacaacactttgtactaaatag 42616769  T

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Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 6642464 - 6642528
Alignment:
Q  17 gctatagtgctataatgtcgctataacctattatttgacaacactttgtactaaatagcgtattg 81  Q
    |||| |||||||||  ||||||||| || | ||||||||  |||||||||||||||||| |||||    
T  6642464 gctacagtgctatagcgtcgctatagcccactatttgacttcactttgtactaaatagcatattg 6642528  T

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Target: scaffold0194 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 13846 - 13801
Alignment:
Q  47 ttatttgacaacactttgtactaaatagcgtattgtggaacaatag 92  Q
    ||||||||||||||| |||||||||  || ||||||||||||||||    
T  13846 ttatttgacaacactatgtactaaacggcatattgtggaacaatag 13801  T

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