View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19529_high_29 (Length: 360)
Name: NF19529_high_29
Description: NF19529
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19529_high_29 |
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Alignment Details
Target: chr8 (Bit Score: 320; Significance: 1e-180; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 20 - 355
Target Start/End: Complemental strand, 42701992 - 42701657
Alignment:
| Q |
20 |
ctacttgggaacctaagaaaagaatggaggaaagcaaatattattctcatcgttgctgtagttgttcttatatgggtttatgtcattgcttgcagtgctt |
119 |
Q |
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| T |
42701992 |
ctacttgggaacctaagaaaagaatggaggaaagcaaatattattctcatcgttgctgtagttgttcttatatgggtttatgtcattgcttgcagtgctt |
42701893 |
T |
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| Q |
120 |
ttaagaatgctcaaacagaagacctcttcacccgttacaaacagggttgggtatgaattttatcatctttcctcacaatctacgtagcactgagaattta |
219 |
Q |
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| T |
42701892 |
ttaagaatgctcaaacagaagacctcttcacccgttacaaacagggttgggtatgaattttatcatctttcctcacaatctacgtagcactgagaattta |
42701793 |
T |
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| Q |
220 |
ggtaaaagacatgttcgacactctacgctgcctgatatacatacaacacaaacacttgctggttataacctatcacttttttccttttaaaatcactact |
319 |
Q |
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| T |
42701792 |
ggtaaaagacatgttcgacactctacgctgcctgatatacacacgacacaaacacttgctggttataacctatcacttttttccttttaaaatcactact |
42701693 |
T |
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| Q |
320 |
aatgtttatgtgacaatatcagtgttctgtgctgct |
355 |
Q |
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|||||||||||| ||||||||||||| ||||||||| |
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| T |
42701692 |
aatgtttatgtgccaatatcagtgttgtgtgctgct |
42701657 |
T |
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