View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19529_high_52 (Length: 214)

Name: NF19529_high_52
Description: NF19529
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19529_high_52
NF19529_high_52
[»] chr6 (19 HSPs)
chr6 (20-200)||(27604359-27604539)
chr6 (30-194)||(26802801-26802962)
chr6 (34-194)||(27592688-27592848)
chr6 (34-194)||(27679305-27679465)
chr6 (40-194)||(27677290-27677442)
chr6 (34-194)||(27706071-27706230)
chr6 (30-109)||(27427277-27427356)
chr6 (30-109)||(28786677-28786757)
chr6 (30-109)||(28792798-28792878)
chr6 (30-100)||(28781549-28781620)
chr6 (34-94)||(26646932-26646992)
chr6 (34-94)||(26752900-26752960)
chr6 (30-82)||(27698249-27698301)
chr6 (34-93)||(26143322-26143381)
chr6 (149-194)||(27530983-27531028)
chr6 (34-94)||(25483512-25483572)
chr6 (34-93)||(25538997-25539056)
chr6 (36-94)||(26056375-26056433)
chr6 (36-94)||(26076345-26076403)
[»] scaffold0003 (1 HSPs)
scaffold0003 (30-109)||(60007-60086)
[»] chr4 (6 HSPs)
chr4 (30-109)||(18074199-18074278)
chr4 (30-105)||(18655136-18655211)
chr4 (30-105)||(18723744-18723819)
chr4 (38-98)||(18699067-18699127)
chr4 (31-99)||(18731164-18731232)
chr4 (54-105)||(18679250-18679301)
[»] scaffold0419 (1 HSPs)
scaffold0419 (30-100)||(7935-8006)
[»] scaffold0277 (2 HSPs)
scaffold0277 (30-100)||(13338-13409)
scaffold0277 (43-109)||(4390-4457)
[»] chr1 (3 HSPs)
chr1 (30-109)||(268015-268094)
chr1 (51-100)||(28164048-28164097)
chr1 (36-100)||(28127333-28127397)


Alignment Details
Target: chr6 (Bit Score: 173; Significance: 3e-93; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 20 - 200
Target Start/End: Original strand, 27604359 - 27604539
Alignment:
Q  20 atccatgtacactcagaatatattatacatttctaactattttgacatataaataactaatacttgtttaaaaacgtaaatgaaaaaggtatttgatctc 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27604359 atccatgtacactcagaatatattatacatttctaactattttgacatataaataactaatacttgtttaaaaacgtaaataaaaaaggtatttgatctc 27604458  T
Q  120 atttaaccttgaatatgagattatagggtaattgaaattgaataaagaaaatacaaaagggaaaaataggatttatgtagt 200  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27604459 atttaaccttgaatatgagattattgggtaattgaaattgaataaagaaaatacaaaagggaaaaataggatttatgtagt 27604539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 30 - 194
Target Start/End: Complemental strand, 26802962 - 26802801
Alignment:
Q  30 actcagaatatattatacatttctaactattttgacatataaataactaatacttgtttaaaaacgtaaatgaaaaaggtatttgatctcatttaacctt 129  Q
    ||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| || | |||||||||   || |||||||||||    
T  26802962 actcataatatattatacatttctaactatttcaacatataaataactaatacttgtttaaaaacgtatataagaaaggtatt---tcccatttaacctt 26802866  T
Q  130 gaatatgagattatagggtaattgaaattgaataaagaaaatacaaaagggaaaaataggattta 194  Q
     || |||||||||| ||| ||||||| ||||| ||| |||||| |||||||||||||||||||||    
T  26802865 taagatgagattattgggaaattgaagttgaagaaataaaatataaaagggaaaaataggattta 26802801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 34 - 194
Target Start/End: Original strand, 27592688 - 27592848
Alignment:
Q  34 agaatatattatacatttctaactattttgacatataaataactaa---tacttgtttaaaaacgtaaatgaaaaaggtatttgatctcatttaaccttg 130  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||   |||||||||||||  ||| || |||||||||||   || | |||||||||     
T  27592688 agaatgtattatacatttctaactatttcgacatataaataactaatagtacttgtttaaaactgtatataaaaaaggtatt---tcccttttaaccttt 27592784  T
Q  131 aatatgagattatagggtaattgaaattgaataaagaaaatacaaaagggaaaaataggattta 194  Q
    || |||||||||| |   ||||||| ||||| ||| |||||| |||||||||||||||||||||    
T  27592785 aagatgagattattgtaaaattgaagttgaagaaataaaatagaaaagggaaaaataggattta 27592848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 34 - 194
Target Start/End: Complemental strand, 27679465 - 27679305
Alignment:
Q  34 agaatatattatacatttctaactattttgacatataaataactaa---tacttgtttaaaaacgtaaatgaaaaaggtatttgatctcatttaaccttg 130  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||   |||||||||||||  ||| || |||||||||||   || | |||||||||     
T  27679465 agaatgtattatacatttctaactatttcgacatataaataactaatagtacttgtttaaaactgtatataaaaaaggtatt---tcccttttaaccttt 27679369  T
Q  131 aatatgagattatagggtaattgaaattgaataaagaaaatacaaaagggaaaaataggattta 194  Q
    || |||||||||| |   ||||||| ||||| ||| |||||| |||||||||||||||||||||    
T  27679368 aagatgagattattgtaaaattgaagttgaagaaataaaatagaaaagggaaaaataggattta 27679305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 40 - 194
Target Start/End: Original strand, 27677290 - 27677442
Alignment:
Q  40 tattatacatttctaactattttgacatataaataactaatacttgtttaaaaac-gtaaatgaaaaaggtatttgatctcatttaaccttgaatatgag 138  Q
    |||||||||||||||||||||| ||||||||||||||||||| |  ||| ||||| ||| || |||||||||||   || | ||||||||| || |||||    
T  27677290 tattatacatttctaactatttcgacatataaataactaatagtacttttaaaactgtatataaaaaaggtatt---tcccttttaacctttaagatgag 27677386  T
Q  139 attatagggtaattgaaattgaataaagaaaatacaaaagggaaaaataggattta 194  Q
    ||||| | | ||||||| ||||| ||| |||||| |||||||||||||||||||||    
T  27677387 attattgtgaaattgaagttgaagaaataaaatagaaaagggaaaaataggattta 27677442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 34 - 194
Target Start/End: Original strand, 27706071 - 27706230
Alignment:
Q  34 agaatatattatacatttctaactattttgacatataaataactaa---tacttgtttaaaaacgtaaatgaaaaaggtatttgatctcatttaaccttg 130  Q
    ||||| |||||| ||||||||||||||| |||||||||||||||||   |||||||||||||  ||| || ||||||||||||     | ||||| |||     
T  27706071 agaatgtattattcatttctaactatttcgacatataaataactaatagtacttgtttaaaactgtatataaaaaaggtattt----ccctttaaacttt 27706166  T
Q  131 aatatgagattatagggtaattgaaattgaataaagaaaatacaaaagggaaaaataggattta 194  Q
    || |||||||||| | | ||||||| ||||| ||| |||||| |||||||||||||||||||||    
T  27706167 aagatgagattattgtgaaattgaagttgaagaaataaaatagaaaagggaaaaataggattta 27706230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 27427277 - 27427356
Alignment:
Q  30 actcagaatatattatacatttctaactattttgacatataaataactaatacttgtttaaaaacgtaaatgaaaaaggt 109  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||| ||||| ||||||||    
T  27427277 actcataatatattatacatttttaactattttgacatataaataactaacaattgtttaaaaacataaataaaaaaggt 27427356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 30 - 109
Target Start/End: Complemental strand, 28786757 - 28786677
Alignment:
Q  30 actcagaatatattatacatttctaactattttgacatataaataact-aatacttgtttaaaaacgtaaatgaaaaaggt 109  Q
    |||||||||||| |||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||  |||||||    
T  28786757 actcagaatatagtatacatttctaactattttgacataaaaataattaaatacttgtttaaaaacgtaaatagaaaaggt 28786677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 30 - 109
Target Start/End: Complemental strand, 28792878 - 28792798
Alignment:
Q  30 actcagaatatattatacatttctaactattttgacatataaataact-aatacttgtttaaaaacgtaaatgaaaaaggt 109  Q
    |||||||||||| |||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||  |||||||    
T  28792878 actcagaatatagtatacatttctaactattttgacataaaaataattaaatacttgtttaaaaacgtaaatagaaaaggt 28792798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 28781620 - 28781549
Alignment:
Q  30 actcagaatatattatacatttctaactattttgacatataaataact-aatacttgtttaaaaacgtaaat 100  Q
    |||||||||||| |||||||||||||||||||||||||| |||||| | |||| ||||||||||||||||||    
T  28781620 actcagaatatagtatacatttctaactattttgacataaaaataattaaataattgtttaaaaacgtaaat 28781549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 26646992 - 26646932
Alignment:
Q  34 agaatatattatacatttctaactattttgacatataaataactaatacttgtttaaaaac 94  Q
    ||||||||||||||| |||||||| ||||||||||||||||| | ||||||||||||||||    
T  26646992 agaatatattatacagttctaactcttttgacatataaataatttatacttgtttaaaaac 26646932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 26752960 - 26752900
Alignment:
Q  34 agaatatattatacatttctaactattttgacatataaataactaatacttgtttaaaaac 94  Q
    ||||||||||||||| |||||||| ||||||||||||||||| | ||||||||||||||||    
T  26752960 agaatatattatacagttctaactcttttgacatataaataatttatacttgtttaaaaac 26752900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 27698249 - 27698301
Alignment:
Q  30 actcagaatatattatacatttctaactattttgacatataaataactaatac 82  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  27698249 actcagaatatattataaatttctaactatttcgacatataaataactaatac 27698301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 26143381 - 26143322
Alignment:
Q  34 agaatatattatacatttctaactattttgacatataaataactaatacttgtttaaaaa 93  Q
    |||||||||||| || |||||||| ||||||||||||||||||| | |||||||| ||||    
T  26143381 agaatatattatgcaattctaacttttttgacatataaataacttacacttgttttaaaa 26143322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 194
Target Start/End: Original strand, 27530983 - 27531028
Alignment:
Q  149 aattgaaattgaataaagaaaatacaaaagggaaaaataggattta 194  Q
    |||||||||| || |||||||||| |||||||||||||||||||||    
T  27530983 aattgaaattaaagaaagaaaatataaaagggaaaaataggattta 27531028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 25483572 - 25483512
Alignment:
Q  34 agaatatattatacatttctaactattttgacatataaataactaatacttgtttaaaaac 94  Q
    ||||||||| || || |||||||| ||||||||||||||||||| | |||||||| |||||    
T  25483572 agaatatatcatgcaattctaacttttttgacatataaataacttacacttgttttaaaac 25483512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 25539056 - 25538997
Alignment:
Q  34 agaatatattatacatttctaactattttgacatataaataactaatacttgtttaaaaa 93  Q
    |||||||||||| || |||||| | ||||||||||||||||||| | |||||||| ||||    
T  25539056 agaatatattatgcaattctaatttttttgacatataaataacttacacttgttttaaaa 25538997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 26056433 - 26056375
Alignment:
Q  36 aatatattatacatttctaactattttgacatataaataactaatacttgtttaaaaac 94  Q
    |||||||||| || |||||||| ||||||||||||||||||| | ||| |||| |||||    
T  26056433 aatatattatgcaattctaacttttttgacatataaataacttacactagttttaaaac 26056375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 26076403 - 26076345
Alignment:
Q  36 aatatattatacatttctaactattttgacatataaataactaatacttgtttaaaaac 94  Q
    |||||||||| || |||||||| ||||||||||||||||||| | ||| |||| |||||    
T  26076403 aatatattatgcaattctaacttttttgacatataaataacttacactagttttaaaac 26076345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 30 - 109
Target Start/End: Complemental strand, 60086 - 60007
Alignment:
Q  30 actcagaatatattatacatttctaactattttgacatataaataactaatacttgtttaaaaacgtaaatgaaaaaggt 109  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||| ||||| ||||||||    
T  60086 actcataatatattatacatttttaactattttgacatataaataactaacaattgtttaaaaacataaataaaaaaggt 60007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 2e-23; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 30 - 109
Target Start/End: Complemental strand, 18074278 - 18074199
Alignment:
Q  30 actcagaatatattatacatttctaactattttgacatataaataactaatacttgtttaaaaacgtaaatgaaaaaggt 109  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||| ||||| ||||||||    
T  18074278 actcataatatattatacatttttaactattttgacatataaataactaacaattgtttaaaaacataaataaaaaaggt 18074199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 18655136 - 18655211
Alignment:
Q  30 actcagaatatattatacatttctaactattttgacatataaataactaatacttgtttaaaaacgtaaatgaaaa 105  Q
    ||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  18655136 actcataatatatcatacatttctaactattttgacttataaataactaatacttgtttaaaaatgtaaataaaaa 18655211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 18723744 - 18723819
Alignment:
Q  30 actcagaatatattatacatttctaactattttgacatataaataactaatacttgtttaaaaacgtaaatgaaaa 105  Q
    ||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  18723744 actcataatatatcatacatttctaactattttgacttataaataactaatacttgtttaaaaatgtaaataaaaa 18723819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 18699067 - 18699127
Alignment:
Q  38 tatattatacatttctaactattttgacatataaataactaatacttgtttaaaaacgtaa 98  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18699067 tatatcatacatttctaactattttgacttataaataactaatacttgtttaaaaacgtaa 18699127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 18731164 - 18731232
Alignment:
Q  31 ctcagaatatattatacatttctaactattttgacatataaataactaatacttgtttaaaaacgtaaa 99  Q
    |||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  18731164 ctcataatatatcatacatttctaactattttgacttataaataactaatacttgtttaaaaatgtaaa 18731232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 54 - 105
Target Start/End: Original strand, 18679250 - 18679301
Alignment:
Q  54 aactattttgacatataaataactaatacttgtttaaaaacgtaaatgaaaa 105  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  18679250 aactattttgacttataaataactaatacttgtttaaaaacgtaaataaaaa 18679301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 8006 - 7935
Alignment:
Q  30 actcagaatatattatacatttctaactattttgacatataaataact-aatacttgtttaaaaacgtaaat 100  Q
    |||||||||||| |||||||||||||||||||||||||| || ||| | |||||||||||||||||||||||    
T  8006 actcagaatatagtatacatttctaactattttgacataaaagtaattaaatacttgtttaaaaacgtaaat 7935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 30 - 100
Target Start/End: Original strand, 13338 - 13409
Alignment:
Q  30 actcagaatatattatacatttctaactattttgacatataaataact-aatacttgtttaaaaacgtaaat 100  Q
    |||||||||||| |||||||||||||||||||||||||| || ||| | |||||||||||||||||||||||    
T  13338 actcagaatatagtatacatttctaactattttgacataaaagtaattaaatacttgtttaaaaacgtaaat 13409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 4390 - 4457
Alignment:
Q  43 tatacatttctaactattttgacatataaataactaa-tacttgtttaaaaacgtaaatgaaaaaggt 109  Q
    |||||||||||||||||| ||||||| || ||| ||| |||||||||||||||||||||  |||||||    
T  4390 tatacatttctaactattgtgacataaaagtaattaaatacttgtttaaaaacgtaaatataaaaggt 4457  T

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Target: chr1 (Bit Score: 48; Significance: 1e-18; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 268015 - 268094
Alignment:
Q  30 actcagaatatattatacatttctaactattttgacatataaataactaatacttgtttaaaaacgtaaatgaaaaaggt 109  Q
    ||||| |||||||||||| ||||||||||||| | |||||||| ||||||||||| |||| |||||||||| ||||||||    
T  268015 actcaaaatatattatacgtttctaactatttcgtcatataaacaactaatacttatttagaaacgtaaataaaaaaggt 268094  T

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Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 28164048 - 28164097
Alignment:
Q  51 tctaactattttgacatataaataactaatacttgtttaaaaacgtaaat 100  Q
    |||||||||||||||||||||||| || |||||||||||||||| |||||    
T  28164048 tctaactattttgacatataaatatcttatacttgtttaaaaacataaat 28164097  T

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Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 28127333 - 28127397
Alignment:
Q  36 aatatattatacatttctaactattttgacatataaataactaatacttgtttaaaaacgtaaat 100  Q
    |||| ||||||||  ||| |||||||||||||||||||| || |||||||||||||||| |||||    
T  28127333 aatacattatacaactctgactattttgacatataaataccttatacttgtttaaaaacataaat 28127397  T

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