View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19529_low_12 (Length: 554)

Name: NF19529_low_12
Description: NF19529
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19529_low_12
NF19529_low_12
[»] chr1 (70 HSPs)
chr1 (17-544)||(47455218-47455745)
chr1 (207-407)||(47451194-47451394)
chr1 (207-409)||(19798980-19799182)
chr1 (207-409)||(23192785-23192986)
chr1 (207-409)||(51041430-51041630)
chr1 (207-409)||(39588334-39588536)
chr1 (207-409)||(33301147-33301349)
chr1 (207-409)||(40165906-40166108)
chr1 (207-409)||(16649580-16649781)
chr1 (207-409)||(26927689-26927891)
chr1 (207-409)||(10135382-10135584)
chr1 (407-544)||(10136999-10137136)
chr1 (207-409)||(16035528-16035736)
chr1 (212-354)||(3094045-3094187)
chr1 (207-339)||(25855097-25855229)
chr1 (212-411)||(38620624-38620822)
chr1 (207-409)||(10140015-10140217)
chr1 (407-544)||(25845430-25845567)
chr1 (209-378)||(18784547-18784716)
chr1 (18-186)||(47460677-47460845)
chr1 (264-410)||(12259979-12260125)
chr1 (207-318)||(16832027-16832138)
chr1 (18-187)||(47467342-47467511)
chr1 (207-290)||(25843738-25843821)
chr1 (256-378)||(8900229-8900351)
chr1 (263-409)||(11806341-11806487)
chr1 (271-377)||(2493817-2493923)
chr1 (277-377)||(10106100-10106199)
chr1 (292-376)||(12906166-12906248)
chr1 (277-376)||(38734272-38734370)
chr1 (311-409)||(8137969-8138067)
chr1 (407-523)||(11810583-11810696)
chr1 (271-376)||(27761839-27761944)
chr1 (270-391)||(5346652-5346773)
chr1 (292-393)||(33380905-33381004)
chr1 (323-411)||(16833526-16833614)
chr1 (277-376)||(13890810-13890908)
chr1 (277-376)||(39747165-39747263)
chr1 (347-409)||(25843822-25843884)
chr1 (280-376)||(5724979-5725074)
chr1 (280-376)||(36684715-36684810)
chr1 (271-393)||(24159783-24159904)
chr1 (277-376)||(26651166-26651264)
chr1 (271-376)||(36724698-36724803)
chr1 (280-376)||(3584601-3584696)
chr1 (280-376)||(11251113-11251208)
chr1 (280-376)||(34318224-34318319)
chr1 (280-376)||(37404416-37404511)
chr1 (277-376)||(5602425-5602523)
chr1 (271-373)||(4632929-4633031)
chr1 (292-377)||(23193222-23193306)
chr1 (280-376)||(5730105-5730200)
chr1 (316-404)||(25779288-25779376)
chr1 (280-376)||(37409537-37409632)
chr1 (277-376)||(14582096-14582194)
chr1 (277-315)||(8267891-8267929)
chr1 (271-316)||(19422937-19422982)
chr1 (280-321)||(27716443-27716484)
chr1 (269-406)||(28434544-28434680)
chr1 (207-256)||(46696596-46696645)
chr1 (292-376)||(31063968-31064050)
chr1 (312-374)||(28858065-28858126)
chr1 (280-321)||(11387884-11387925)
chr1 (207-256)||(12259911-12259959)
chr1 (299-340)||(25661858-25661899)
chr1 (292-389)||(32987252-32987347)
chr1 (407-472)||(37408526-37408591)
chr1 (277-310)||(41098017-41098050)
chr1 (207-251)||(8900162-8900206)
chr1 (208-256)||(28434705-28434753)
[»] scaffold0182 (1 HSPs)
scaffold0182 (207-409)||(9854-10056)
[»] chr5 (64 HSPs)
chr5 (207-409)||(29167940-29168142)
chr5 (207-409)||(556621-556823)
chr5 (207-409)||(561393-561595)
chr5 (207-407)||(41996591-41996791)
chr5 (207-407)||(42001360-42001560)
chr5 (207-409)||(12102950-12103153)
chr5 (207-409)||(26667198-26667400)
chr5 (207-409)||(26938795-26938997)
chr5 (212-409)||(36428640-36428837)
chr5 (207-409)||(12501866-12502069)
chr5 (230-409)||(36942232-36942411)
chr5 (207-409)||(39522974-39523177)
chr5 (207-409)||(6155386-6155588)
chr5 (207-409)||(39518336-39518538)
chr5 (207-409)||(12045106-12045309)
chr5 (230-409)||(36937478-36937657)
chr5 (204-393)||(37248778-37248967)
chr5 (209-409)||(36423565-36423765)
chr5 (207-406)||(7451684-7451883)
chr5 (207-409)||(41587127-41587329)
chr5 (206-409)||(3665856-3666060)
chr5 (207-404)||(10759792-10759992)
chr5 (207-411)||(6514566-6514769)
chr5 (207-379)||(37652827-37652999)
chr5 (214-406)||(40147828-40148020)
chr5 (212-409)||(11981247-11981443)
chr5 (407-544)||(26668951-26669088)
chr5 (407-544)||(26940548-26940685)
chr5 (207-409)||(20181030-20181233)
chr5 (207-409)||(12041899-12042101)
chr5 (207-393)||(35679858-35680047)
chr5 (407-544)||(558443-558580)
chr5 (407-544)||(41998389-41998526)
chr5 (211-409)||(32461516-32461702)
chr5 (419-544)||(36425326-36425451)
chr5 (407-544)||(36940474-36940611)
chr5 (407-544)||(39520059-39520196)
chr5 (261-406)||(12102801-12102946)
chr5 (263-409)||(16116216-16116362)
chr5 (264-372)||(15414885-15414993)
chr5 (207-289)||(37550089-37550170)
chr5 (346-407)||(4871987-4872048)
chr5 (280-376)||(13582690-13582785)
chr5 (280-376)||(24435869-24435964)
chr5 (277-376)||(7805068-7805166)
chr5 (277-376)||(14374132-14374230)
chr5 (280-376)||(36253826-36253921)
chr5 (256-409)||(9911128-9911280)
chr5 (326-379)||(37550029-37550082)
chr5 (280-376)||(17510058-17510153)
chr5 (276-409)||(13301454-13301585)
chr5 (292-393)||(18265489-18265588)
chr5 (280-377)||(24771356-24771452)
chr5 (209-253)||(12104205-12104249)
chr5 (280-376)||(42019573-42019668)
chr5 (271-377)||(1414050-1414155)
chr5 (280-321)||(26709102-26709143)
chr5 (280-321)||(26978836-26978877)
chr5 (280-376)||(17504953-17505048)
chr5 (280-316)||(41853548-41853584)
chr5 (271-321)||(24776869-24776919)
chr5 (296-377)||(1286265-1286344)
chr5 (211-256)||(9496714-9496759)
chr5 (277-310)||(31731540-31731573)
[»] scaffold0002 (2 HSPs)
scaffold0002 (205-409)||(3998-4202)
scaffold0002 (207-404)||(443917-444101)
[»] chr3 (78 HSPs)
chr3 (202-409)||(3672505-3672712)
chr3 (207-409)||(3692542-3692744)
chr3 (205-409)||(39775695-39775899)
chr3 (207-409)||(7571185-7571387)
chr3 (207-409)||(18467149-18467351)
chr3 (207-409)||(23666090-23666292)
chr3 (207-409)||(24038338-24038540)
chr3 (207-409)||(8069603-8069805)
chr3 (207-409)||(8883094-8883296)
chr3 (212-409)||(758335-758532)
chr3 (212-409)||(3033573-3033770)
chr3 (207-411)||(18471932-18472135)
chr3 (207-409)||(14438662-14438864)
chr3 (207-410)||(3418918-3419122)
chr3 (207-406)||(8887854-8888053)
chr3 (206-393)||(29350163-29350350)
chr3 (209-409)||(12965840-12966040)
chr3 (230-409)||(32474647-32474824)
chr3 (210-409)||(55431242-55431441)
chr3 (207-407)||(20519978-20520178)
chr3 (203-406)||(49971394-49971597)
chr3 (263-411)||(12971598-12971746)
chr3 (207-409)||(3657207-3657409)
chr3 (407-544)||(8884917-8885054)
chr3 (209-409)||(29715570-29715770)
chr3 (207-409)||(23661431-23661619)
chr3 (407-544)||(18468886-18469023)
chr3 (407-544)||(23664406-23664543)
chr3 (407-544)||(3674313-3674451)
chr3 (207-389)||(12112628-12112822)
chr3 (206-333)||(27708802-27708928)
chr3 (407-522)||(12970116-12970231)
chr3 (306-409)||(27708959-27709062)
chr3 (263-407)||(28125097-28125242)
chr3 (207-321)||(2207762-2207876)
chr3 (271-376)||(26962050-26962154)
chr3 (277-376)||(13022024-13022122)
chr3 (264-409)||(20507637-20507779)
chr3 (272-339)||(25726830-25726897)
chr3 (277-376)||(33089343-33089441)
chr3 (271-393)||(48432398-48432519)
chr3 (280-376)||(20090662-20090757)
chr3 (280-376)||(20095787-20095882)
chr3 (280-376)||(34129169-34129264)
chr3 (277-376)||(20810369-20810467)
chr3 (277-376)||(53119524-53119622)
chr3 (271-376)||(48435828-48435933)
chr3 (271-376)||(15768191-15768295)
chr3 (280-376)||(17364063-17364160)
chr3 (280-376)||(3476946-3477041)
chr3 (292-376)||(4662196-4662279)
chr3 (280-376)||(15763030-15763125)
chr3 (298-389)||(16013724-16013816)
chr3 (280-376)||(17368719-17368814)
chr3 (277-376)||(2617256-2617355)
chr3 (277-376)||(38436991-38437089)
chr3 (207-256)||(16013644-16013693)
chr3 (292-393)||(16983006-16983105)
chr3 (280-376)||(17357836-17357933)
chr3 (271-376)||(27605135-27605240)
chr3 (280-376)||(3482423-3482518)
chr3 (347-411)||(6596322-6596386)
chr3 (265-409)||(19276887-19277031)
chr3 (280-376)||(54270644-54270739)
chr3 (354-404)||(55325847-55325897)
chr3 (279-376)||(21494302-21494399)
chr3 (271-377)||(7806553-7806656)
chr3 (280-376)||(55128790-55128885)
chr3 (282-321)||(10321444-10321483)
chr3 (268-378)||(17026103-17026213)
chr3 (299-377)||(46964031-46964109)
chr3 (277-315)||(53358239-53358277)
chr3 (332-377)||(1741108-1741153)
chr3 (271-376)||(4117600-4117704)
chr3 (277-310)||(10586248-10586281)
chr3 (280-321)||(30341898-30341939)
chr3 (299-378)||(1641069-1641149)
chr3 (282-314)||(1688948-1688980)
[»] chr2 (56 HSPs)
chr2 (207-409)||(30650855-30651057)
chr2 (207-409)||(9189770-9189972)
chr2 (207-409)||(19892433-19892635)
chr2 (207-409)||(9180691-9180893)
chr2 (207-409)||(18344357-18344559)
chr2 (206-409)||(1934960-1935163)
chr2 (207-409)||(7737818-7738020)
chr2 (207-409)||(31326665-31326867)
chr2 (207-409)||(35601848-35602050)
chr2 (207-409)||(35638964-35639166)
chr2 (207-404)||(10160696-10160893)
chr2 (207-409)||(30658189-30658391)
chr2 (207-409)||(42926726-42926929)
chr2 (207-404)||(25478269-25478470)
chr2 (207-394)||(30631505-30631692)
chr2 (207-409)||(12796851-12797053)
chr2 (207-404)||(25497297-25497498)
chr2 (213-409)||(28603230-28603431)
chr2 (207-409)||(29677308-29677509)
chr2 (207-409)||(29677694-29677895)
chr2 (407-544)||(25483054-25483191)
chr2 (407-544)||(25490660-25490797)
chr2 (407-544)||(17973635-17973772)
chr2 (407-544)||(30652588-30652725)
chr2 (407-544)||(9183702-9183839)
chr2 (261-409)||(19094461-19094610)
chr2 (207-389)||(19578401-19578595)
chr2 (261-406)||(40847565-40847710)
chr2 (266-407)||(21523689-21523829)
chr2 (407-522)||(30647872-30647988)
chr2 (207-294)||(15489796-15489883)
chr2 (256-404)||(17545270-17545419)
chr2 (207-352)||(20711358-20711516)
chr2 (277-376)||(42914639-42914737)
chr2 (422-522)||(24536327-24536424)
chr2 (271-376)||(160031-160136)
chr2 (279-376)||(5089277-5089373)
chr2 (280-376)||(42723451-42723546)
chr2 (280-376)||(42728620-42728715)
chr2 (280-376)||(44096302-44096397)
chr2 (280-376)||(44754596-44754691)
chr2 (280-376)||(44759762-44759857)
chr2 (271-393)||(14104580-14104701)
chr2 (271-376)||(44957437-44957542)
chr2 (280-376)||(40518472-40518567)
chr2 (407-472)||(32080735-32080800)
chr2 (407-451)||(3175224-3175268)
chr2 (257-412)||(32079354-32079510)
chr2 (279-315)||(39542900-39542936)
chr2 (207-251)||(40847735-40847779)
chr2 (262-389)||(7734581-7734707)
chr2 (277-315)||(19538382-19538420)
chr2 (277-310)||(6297951-6297984)
chr2 (280-321)||(28751783-28751824)
chr2 (271-315)||(39542566-39542610)
chr2 (280-376)||(40392319-40392414)
[»] scaffold0352 (1 HSPs)
scaffold0352 (206-409)||(7029-7232)
[»] chr4 (91 HSPs)
chr4 (207-409)||(31273447-31273649)
chr4 (207-409)||(5271386-5271586)
chr4 (207-409)||(37259844-37260046)
chr4 (207-409)||(37264531-37264733)
chr4 (205-409)||(8693635-8693839)
chr4 (209-409)||(31268962-31269162)
chr4 (207-409)||(16420956-16421157)
chr4 (207-409)||(5928186-5928388)
chr4 (207-409)||(55251647-55251847)
chr4 (207-409)||(8030443-8030645)
chr4 (241-411)||(33463321-33463491)
chr4 (207-378)||(13521990-13522162)
chr4 (212-409)||(33468940-33469137)
chr4 (205-409)||(19101901-19102105)
chr4 (207-378)||(12823893-12824064)
chr4 (207-409)||(32082058-32082259)
chr4 (230-397)||(31765831-31766002)
chr4 (209-404)||(51697841-51698040)
chr4 (225-411)||(13059354-13059540)
chr4 (219-409)||(47244186-47244376)
chr4 (263-409)||(42758722-42758868)
chr4 (407-544)||(37262848-37262985)
chr4 (207-377)||(19106545-19106715)
chr4 (224-408)||(47574567-47574752)
chr4 (409-544)||(13061140-13061274)
chr4 (407-544)||(33467346-33467483)
chr4 (240-408)||(19906210-19906377)
chr4 (407-544)||(12876011-12876147)
chr4 (207-409)||(48276616-48276807)
chr4 (207-310)||(32221163-32221266)
chr4 (207-409)||(31729354-31729540)
chr4 (268-411)||(19541126-19541269)
chr4 (213-351)||(51696931-51697072)
chr4 (407-522)||(7899184-7899300)
chr4 (411-522)||(19103653-19103764)
chr4 (264-393)||(12878222-12878351)
chr4 (256-366)||(13065778-13065888)
chr4 (263-378)||(2819826-2819941)
chr4 (263-409)||(4550980-4551125)
chr4 (264-406)||(12874522-12874664)
chr4 (263-387)||(1151286-1151411)
chr4 (407-522)||(8028637-8028753)
chr4 (255-409)||(32545068-32545223)
chr4 (407-520)||(12316282-12316395)
chr4 (280-376)||(653043-653138)
chr4 (271-374)||(10120811-10120913)
chr4 (303-379)||(16953107-16953183)
chr4 (270-406)||(16947994-16948126)
chr4 (208-266)||(55810257-55810315)
chr4 (292-377)||(16595933-16596017)
chr4 (292-377)||(20513118-20513202)
chr4 (280-376)||(36354176-36354271)
chr4 (280-376)||(36359294-36359389)
chr4 (280-376)||(39999069-39999164)
chr4 (280-376)||(40004027-40004122)
chr4 (280-376)||(53797629-53797724)
chr4 (280-376)||(54343203-54343298)
chr4 (280-376)||(54348357-54348452)
chr4 (271-393)||(33722904-33723025)
chr4 (292-389)||(15020454-15020549)
chr4 (273-342)||(52691089-52691158)
chr4 (265-341)||(6070571-6070647)
chr4 (280-376)||(8980285-8980380)
chr4 (280-376)||(8985405-8985500)
chr4 (280-376)||(13700510-13700605)
chr4 (280-376)||(21299833-21299928)
chr4 (280-376)||(41393245-41393340)
chr4 (280-376)||(51019373-51019468)
chr4 (280-376)||(54991486-54991581)
chr4 (277-376)||(24490028-24490127)
chr4 (279-389)||(40408196-40408307)
chr4 (280-376)||(13695159-13695254)
chr4 (280-376)||(21304953-21305048)
chr4 (280-376)||(47046307-47046402)
chr4 (213-256)||(23093112-23093155)
chr4 (282-376)||(8083027-8083121)
chr4 (207-255)||(8652129-8652178)
chr4 (207-255)||(8663936-8663985)
chr4 (407-472)||(17681452-17681517)
chr4 (280-376)||(13710669-13710763)
chr4 (363-406)||(8649600-8649643)
chr4 (363-406)||(8661407-8661450)
chr4 (277-316)||(10318839-10318878)
chr4 (286-340)||(30564450-30564504)
chr4 (263-390)||(39217367-39217490)
chr4 (277-315)||(39319628-39319666)
chr4 (207-256)||(12878153-12878202)
chr4 (407-472)||(13687776-13687841)
chr4 (277-310)||(34560494-34560527)
chr4 (259-316)||(34644536-34644593)
chr4 (277-309)||(3998123-3998155)
[»] chr8 (71 HSPs)
chr8 (204-404)||(33416470-33416670)
chr8 (207-409)||(31449833-31450035)
chr8 (207-409)||(17025861-17026063)
chr8 (207-409)||(17556353-17556555)
chr8 (207-409)||(18876334-18876535)
chr8 (204-404)||(44925895-44926095)
chr8 (207-409)||(34118392-34118594)
chr8 (207-409)||(38182204-38182405)
chr8 (207-409)||(1910936-1911138)
chr8 (207-409)||(1807398-1807601)
chr8 (262-409)||(40125852-40125999)
chr8 (207-340)||(40130722-40130855)
chr8 (209-409)||(28559621-28559821)
chr8 (212-354)||(4238337-4238479)
chr8 (255-409)||(19166608-19166762)
chr8 (407-544)||(4241290-4241427)
chr8 (212-354)||(4243076-4243218)
chr8 (407-544)||(17021934-17022071)
chr8 (263-409)||(15875635-15875781)
chr8 (407-544)||(17552371-17552508)
chr8 (261-409)||(17953839-17953988)
chr8 (253-409)||(36683551-36683707)
chr8 (256-404)||(24090602-24090750)
chr8 (207-409)||(2965545-2965758)
chr8 (407-522)||(21960132-21960248)
chr8 (256-411)||(23548597-23548752)
chr8 (207-382)||(43302712-43302880)
chr8 (407-522)||(8329608-8329724)
chr8 (249-386)||(2355449-2355586)
chr8 (207-289)||(19915073-19915155)
chr8 (279-406)||(7902561-7902688)
chr8 (270-409)||(28564786-28564927)
chr8 (270-409)||(28572409-28572550)
chr8 (407-544)||(28861286-28861421)
chr8 (279-376)||(33616727-33616823)
chr8 (277-376)||(19430011-19430109)
chr8 (277-376)||(19435513-19435611)
chr8 (277-376)||(19566160-19566258)
chr8 (277-376)||(19571662-19571760)
chr8 (277-376)||(31030525-31030623)
chr8 (261-376)||(29220246-29220359)
chr8 (280-376)||(32015700-32015795)
chr8 (278-412)||(17793450-17793584)
chr8 (292-377)||(2469986-2470070)
chr8 (271-393)||(4544235-4544356)
chr8 (271-357)||(19954262-19954348)
chr8 (323-409)||(10933474-10933559)
chr8 (271-376)||(13584341-13584453)
chr8 (271-376)||(19949808-19949913)
chr8 (263-385)||(24673316-24673438)
chr8 (312-409)||(12820370-12820467)
chr8 (280-376)||(17955789-17955884)
chr8 (346-409)||(15951523-15951585)
chr8 (292-386)||(20072109-20072200)
chr8 (260-341)||(5883978-5884058)
chr8 (284-376)||(21644081-21644172)
chr8 (277-377)||(42157871-42157970)
chr8 (280-376)||(42514374-42514469)
chr8 (353-409)||(43302658-43302714)
chr8 (302-393)||(34517263-34517351)
chr8 (279-313)||(15951584-15951618)
chr8 (280-374)||(24884712-24884805)
chr8 (309-410)||(27415539-27415640)
chr8 (271-376)||(43999230-43999334)
chr8 (215-277)||(28565268-28565330)
chr8 (215-277)||(28572891-28572953)
chr8 (272-310)||(34818764-34818802)
chr8 (272-310)||(37771703-37771741)
chr8 (280-321)||(32010538-32010579)
chr8 (207-243)||(15951623-15951659)
chr8 (207-239)||(40126000-40126032)
[»] chr7 (59 HSPs)
chr7 (212-409)||(4930164-4930361)
chr7 (207-409)||(8268219-8268421)
chr7 (218-406)||(26341136-26341324)
chr7 (207-407)||(8075975-8076176)
chr7 (209-409)||(13314203-13314403)
chr7 (207-378)||(9650965-9651137)
chr7 (207-409)||(44423104-44423307)
chr7 (263-409)||(4579490-4579636)
chr7 (230-409)||(44510644-44510823)
chr7 (407-539)||(12802955-12803087)
chr7 (261-407)||(23246902-23247048)
chr7 (278-409)||(23866065-23866196)
chr7 (204-409)||(27238164-27238370)
chr7 (210-359)||(42627214-42627364)
chr7 (207-409)||(10388334-10388546)
chr7 (263-409)||(25543329-25543475)
chr7 (207-339)||(30256780-30256912)
chr7 (256-374)||(3357634-3357752)
chr7 (263-404)||(12254061-12254202)
chr7 (207-409)||(21671109-21671323)
chr7 (265-409)||(9008147-9008291)
chr7 (207-409)||(3879922-3880123)
chr7 (261-391)||(29150914-29151044)
chr7 (207-409)||(26287112-26287339)
chr7 (264-378)||(16372381-16372491)
chr7 (277-376)||(24528351-24528449)
chr7 (411-520)||(2596444-2596553)
chr7 (326-411)||(12799455-12799540)
chr7 (256-409)||(15642209-15642362)
chr7 (305-411)||(6590948-6591054)
chr7 (277-377)||(9973459-9973558)
chr7 (280-376)||(33238002-33238097)
chr7 (280-376)||(47998975-47999070)
chr7 (294-355)||(29478176-29478236)
chr7 (280-376)||(2234630-2234725)
chr7 (280-376)||(16539412-16539507)
chr7 (280-376)||(16626155-16626250)
chr7 (280-376)||(32212654-32212749)
chr7 (280-376)||(33243179-33243274)
chr7 (280-376)||(42571945-42572040)
chr7 (280-376)||(47993800-47993895)
chr7 (347-409)||(30258166-30258228)
chr7 (282-376)||(33226416-33226509)
chr7 (407-522)||(10391404-10391516)
chr7 (304-393)||(13142884-13142973)
chr7 (280-376)||(21081039-21081136)
chr7 (277-373)||(28292506-28292600)
chr7 (280-376)||(47177119-47177214)
chr7 (271-373)||(6898359-6898461)
chr7 (294-374)||(3284740-3284820)
chr7 (280-376)||(12934397-12934492)
chr7 (280-376)||(17495403-17495498)
chr7 (280-376)||(17557716-17557811)
chr7 (280-376)||(43892858-43892953)
chr7 (292-375)||(1289334-1289416)
chr7 (407-449)||(15976804-15976846)
chr7 (280-321)||(22857741-22857782)
chr7 (277-310)||(27256239-27256272)
chr7 (259-315)||(7875158-7875214)
[»] chr6 (66 HSPs)
chr6 (202-409)||(2700073-2700281)
chr6 (207-406)||(6407830-6408029)
chr6 (209-406)||(12688899-12689096)
chr6 (219-406)||(11570719-11570906)
chr6 (207-409)||(8747708-8747910)
chr6 (206-411)||(33687568-33687773)
chr6 (207-409)||(21308960-21309159)
chr6 (407-544)||(16834446-16834583)
chr6 (206-353)||(19674238-19674385)
chr6 (230-411)||(14508933-14509114)
chr6 (263-411)||(24589129-24589277)
chr6 (206-318)||(11534736-11534848)
chr6 (206-318)||(11560246-11560358)
chr6 (263-411)||(29892226-29892374)
chr6 (213-345)||(11427975-11428108)
chr6 (261-409)||(12406320-12406468)
chr6 (265-409)||(20748251-20748395)
chr6 (207-404)||(25316535-25316739)
chr6 (207-404)||(26204029-26204233)
chr6 (261-409)||(13736645-13736793)
chr6 (263-409)||(11614059-11614205)
chr6 (301-393)||(16836139-16836231)
chr6 (301-409)||(17964526-17964634)
chr6 (408-540)||(12797060-12797191)
chr6 (267-411)||(22695236-22695380)
chr6 (210-272)||(17964634-17964696)
chr6 (277-376)||(19478145-19478243)
chr6 (277-374)||(3901909-3902006)
chr6 (263-409)||(22609556-22609696)
chr6 (276-376)||(12183000-12183100)
chr6 (277-376)||(13605092-13605190)
chr6 (292-357)||(35129640-35129704)
chr6 (280-376)||(22698243-22698338)
chr6 (280-376)||(31981560-31981655)
chr6 (280-376)||(34142080-34142175)
chr6 (280-376)||(34154696-34154791)
chr6 (352-411)||(11534676-11534735)
chr6 (352-411)||(11560186-11560245)
chr6 (204-391)||(2760240-2760427)
chr6 (300-389)||(32815051-32815138)
chr6 (276-376)||(5600972-5601072)
chr6 (265-409)||(9751775-9751920)
chr6 (277-376)||(10642706-10642805)
chr6 (409-522)||(19992718-19992828)
chr6 (264-310)||(2882821-2882867)
chr6 (280-376)||(21396699-21396794)
chr6 (280-376)||(24192480-24192575)
chr6 (280-376)||(29491237-29491332)
chr6 (280-376)||(34375919-34376014)
chr6 (264-310)||(2863518-2863564)
chr6 (277-315)||(11956762-11956800)
chr6 (278-404)||(12851809-12851937)
chr6 (280-321)||(21401755-21401796)
chr6 (207-256)||(22609481-22609530)
chr6 (280-321)||(24191437-24191478)
chr6 (292-338)||(14041703-14041749)
chr6 (332-409)||(4157336-4157413)
chr6 (280-313)||(6728397-6728430)
chr6 (212-253)||(13736814-13736855)
chr6 (207-256)||(15991829-15991878)
chr6 (207-256)||(15999491-15999540)
chr6 (408-449)||(22693832-22693873)
chr6 (320-377)||(31990898-31990955)
chr6 (208-248)||(12406491-12406531)
chr6 (277-321)||(17281618-17281662)
chr6 (342-406)||(19995373-19995437)
[»] scaffold0012 (1 HSPs)
scaffold0012 (206-409)||(166053-166257)
[»] scaffold0054 (2 HSPs)
scaffold0054 (207-406)||(25325-25524)
scaffold0054 (334-411)||(29209-29285)
[»] scaffold0057 (1 HSPs)
scaffold0057 (207-409)||(35560-35762)
[»] scaffold0045 (1 HSPs)
scaffold0045 (207-409)||(82991-83194)
[»] scaffold0061 (1 HSPs)
scaffold0061 (407-522)||(48187-48303)
[»] scaffold0017 (1 HSPs)
scaffold0017 (407-522)||(150330-150446)
[»] scaffold0015 (1 HSPs)
scaffold0015 (407-522)||(212600-212716)
[»] scaffold0240 (1 HSPs)
scaffold0240 (256-387)||(3966-4097)
[»] scaffold2020 (1 HSPs)
scaffold2020 (206-393)||(282-483)
[»] scaffold0009 (1 HSPs)
scaffold0009 (206-393)||(165012-165213)
[»] scaffold0008 (1 HSPs)
scaffold0008 (268-409)||(255804-255945)
[»] scaffold0060 (2 HSPs)
scaffold0060 (410-522)||(51146-51255)
scaffold0060 (271-376)||(37001-37105)
[»] scaffold0070 (2 HSPs)
scaffold0070 (407-508)||(60155-60256)
scaffold0070 (407-508)||(64357-64458)
[»] scaffold0108 (1 HSPs)
scaffold0108 (407-522)||(21482-21597)
[»] scaffold0184 (1 HSPs)
scaffold0184 (263-409)||(2291-2436)
[»] scaffold0018 (1 HSPs)
scaffold0018 (271-393)||(171700-171820)
[»] scaffold0097 (1 HSPs)
scaffold0097 (207-352)||(15197-15355)
[»] scaffold0132 (2 HSPs)
scaffold0132 (277-376)||(2772-2870)
scaffold0132 (277-376)||(10732-10830)
[»] scaffold0011 (4 HSPs)
scaffold0011 (277-376)||(1562-1660)
scaffold0011 (277-376)||(7043-7141)
scaffold0011 (350-408)||(155486-155544)
scaffold0011 (284-319)||(155552-155587)
[»] scaffold0128 (1 HSPs)
scaffold0128 (274-406)||(13265-13397)
[»] scaffold0055 (1 HSPs)
scaffold0055 (280-376)||(3058-3153)
[»] scaffold0052 (1 HSPs)
scaffold0052 (280-376)||(81382-81477)
[»] scaffold0690 (1 HSPs)
scaffold0690 (407-522)||(6854-6966)
[»] scaffold0594 (1 HSPs)
scaffold0594 (280-376)||(9208-9303)
[»] scaffold0166 (2 HSPs)
scaffold0166 (280-376)||(13740-13835)
scaffold0166 (271-321)||(19252-19302)
[»] scaffold0067 (1 HSPs)
scaffold0067 (277-321)||(34023-34067)
[»] scaffold0014 (2 HSPs)
scaffold0014 (280-376)||(31545-31640)
scaffold0014 (280-376)||(26373-26468)
[»] scaffold0517 (1 HSPs)
scaffold0517 (280-376)||(3563-3658)
[»] scaffold1050 (1 HSPs)
scaffold1050 (292-409)||(1151-1268)
[»] scaffold0020 (1 HSPs)
scaffold0020 (272-310)||(1291-1329)


Alignment Details
Target: chr1 (Bit Score: 504; Significance: 0; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 504; E-Value: 0
Query Start/End: Original strand, 17 - 544
Target Start/End: Complemental strand, 47455745 - 47455218
Alignment:
Q  17 atctatgacaaaaaaggcattcagattccctaatatcttccaccccttcattctcatccaacaacatagcagaacaatccttaaatggacagtagaattt 116  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47455745 atctatgacaaaaagggcattcagattccctaatatcttccaccccttcattctcatccaacaacatagcagaacaatccttaaatggacagtagaattt 47455646  T
Q  117 aggaacagtaacaaaaagagcttcacacaatgcatcattccacttatcaaacaattctttaggaagcaatggcatacatgattcaagttctgttgttttt 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47455645 aggaacagtaacaaaaagagcttcacacaatgcatcattccacttatcaaacaattctttaggaagcaatggcatacatgattcaagttctgttgttttt 47455546  T
Q  217 ggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcg 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  47455545 ggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttcg 47455446  T
Q  317 tggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgcattagtca 416  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  47455445 tggcaatgtccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcctagctacaactgttcgattaactactgcattagtca 47455346  T
Q  417 catcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatactttaaccgtt 516  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47455345 catcctattggatgtgtttatgactttttttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatactttaaccgtt 47455246  T
Q  517 ccttttagagctctctaattattctgtg 544  Q
    ||||||||||||||||||||||||||||    
T  47455245 ccttttagagctctctaattattctgtg 47455218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 207 - 407
Target Start/End: Complemental strand, 47451394 - 47451194
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  47451394 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaaattattactaggttgagtcacgaccaggtcgctctcttta 47451295  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||| ||||| |||| |||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  47451294 agacgtttcatggcactgccaaaaattgtgcaagacagactatcaaccacgccgcctccaagataaaacaagctcaactacaactgttcgattaactact 47451195  T
Q  407 g 407  Q
    |    
T  47451194 g 47451194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 19799182 - 19798980
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||||||||| ||||| ||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||| ||| ||||||||||||    
T  19799182 tgttgtttttggattttcaaactgttgtatttggattttcaaattctattatctatcgaagttgttactaggttgagtcacgatcagatcgctctcttta 19799083  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| |  |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||    
T  19799082 agacgtttcgtggcactatccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgtgcggttaactact 19798983  T
Q  407 gca 409  Q
    |||    
T  19798982 gca 19798980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 23192986 - 23192785
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||||||||| ||||| ||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  23192986 tgttgtttttggattttcaaactgttgtgtttggttttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 23192887  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| ||||||||||||| |||| |||| ||||||||||||| |||||||||||||||||| ||| |||||| ||||||||||||||||    
T  23192886 agacgtttcgtggcactgcccaaaattgtacaaggcagactatcaaccacgcctcctccaggataaaacaag-ccagctacaattgttcgattaactact 23192788  T
Q  407 gca 409  Q
    |||    
T  23192787 gca 23192785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 51041630 - 51041430
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||    
T  51041630 tgttgtttttggatttccaaactgatgtatttggatttccaaattctattatctaccgaagttgttactaagttgagtcacgaccaggtcgctct-ttta 51041532  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| ||||| |||||||||||| |||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||    
T  51041531 agacgtttcgtggcactgccc-aaattgtgcaaggcagactatcaaccacgccgcctccaagataaaacaagcccagctacaactgttcgattaattact 51041433  T
Q  407 gca 409  Q
    |||    
T  51041432 gca 51041430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 39588536 - 39588334
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||| ||||||||||||||||    
T  39588536 tgttgtttttggatttccaaatagttgtatttggatttccaaattatattatccaccgaaattgttactaggttaagtcacgatcaggtcgctctcttta 39588437  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| || |||||||||||||||||||| |||| ||||||||  |||||||||||| ||||| || |||||| ||||||||||||||||    
T  39588436 agacgtttcgtggcactgtccaaaattgtgcaagacagactatctaccacgcctactccaggataaagcaagctcatctacaattgttcgattaactact 39588337  T
Q  407 gca 409  Q
    |||    
T  39588336 gca 39588334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 33301349 - 33301147
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||||| | | ||||||||||||| |||| |||||||||||||| ||||||||    
T  33301349 tgttgtttttggatttccaatctgttgtatttggatttccaaattctattatctatcaaagttgttactagcttgaatcacgaccaggtcgttctcttta 33301250  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||   || |||||||||| || |||||||||    
T  33301249 agacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaatttcatctacaactgtgcggttaactact 33301150  T
Q  407 gca 409  Q
    |||    
T  33301149 gca 33301147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 207 - 409
Target Start/End: Original strand, 40165906 - 40166108
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||| ||||| ||||| |||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  40165906 tgttgtttttagattttcaaactgttgtatttggattaccatattctattatctaccgaagttgttactaggttgagtcacgaccatgtcgctctcttta 40166005  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| |||||||||||||||||| |||| || |||| |||||||||| |||||||||||||| ||||||||||| | ||||||||||||    
T  40166006 agacgtttcgtggcactgcccaaaattgtgcaaggcagactaacaacaacgccgcctctaggataaaacaagcacaactacaactatacgattaactact 40166105  T
Q  407 gca 409  Q
    |||    
T  40166106 gca 40166108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 16649781 - 16649580
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||||||||| ||||| |||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  16649781 tgttgtttttggattttcaaactgttgtatttgaatttccaaattctattatctaccgaagttgttactaagttgagtcacgaccaggtcgctctcttta 16649682  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    |||||||| |||||| || |||||||||||||||| ||| ||||||||||||||||||| |||||||||||| ||| ||||||||||  | |||||||||    
T  16649681 agacgttt-gtggcactgtccaaaattgtgcaagatagactatcaaccacgccgcctccgggataaaacaagtccagctacaactgtgtggttaactact 16649583  T
Q  407 gca 409  Q
    |||    
T  16649582 gca 16649580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 26927891 - 26927689
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||||||||| ||||| |||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||    
T  26927891 tgttgtttttggattttcaaactgttgtatttggatttttaaattctattatctaccgaagttgttactaggttgagtcacgactaagtcgctctcttta 26927792  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||| |  |||||||||||||| |||||||||| |  |||||||||    
T  26927791 agacgtttcgtggcattgcccaaaattgtgcaaggcagactatcaaccacgccgcctctaaaataaaacaagcccagctacaactgtacacttaactact 26927692  T
Q  407 gca 409  Q
    |||    
T  26927691 gca 26927689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 207 - 409
Target Start/End: Original strand, 10135382 - 10135584
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    ||||||||||| ||||||||||   ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  10135382 tgttgtttttgtatttccaaactcctgtatttggatttccaagttctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 10135481  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| | || ||||||||||||| ||||  ||||||||||||||||| |||||||||||||||||  | ||||||| || |||||||||    
T  10135482 agacgtttcgtggcactacctaaaattgtgcaaggcagacaatcaaccacgccgcctctaggataaaacaagcccagttgcaactgtgcggttaactact 10135581  T
Q  407 gca 409  Q
    |||    
T  10135582 gca 10135584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 407 - 544
Target Start/End: Original strand, 10136999 - 10137136
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatac 506  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  10136999 gcattagtcccatcctattggatgtgtttaggactttctttctagtaattcctttcgtcaaaggattgactaattctttatcagtacgtgcacgatatac 10137098  T
Q  507 tttaaccgttccttttagagctctctaattattctgtg 544  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  10137099 tttaaccgttccttttagagctctctaatcattctgtg 10137136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 207 - 409
Target Start/End: Original strand, 16035528 - 16035736
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctat------tatccaccgaagttgttactaggttgagtcacgaccaggtcgctc 300  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||       |||| ||| |||||||||||||||||||||||||||||||||| |    
T  16035528 tgttgtttttggatttccaaactgttgtatttggattttcaaattctaaaatgaatatctaccaaagttgttactaggttgagtcacgaccaggtcgccc 16035627  T
Q  301 tctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgatta 400  Q
    ||||||| ||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||  | |||    
T  16035628 tctttaacacgtttcgtggcactgtccaaagttgtgcaagacagattatcaaccacgccgcctccaggataaaacaagctcatctacaaatgtgtggtta 16035727  T
Q  401 actactgca 409  Q
    |||||||||    
T  16035728 actactgca 16035736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 212 - 354
Target Start/End: Original strand, 3094045 - 3094187
Alignment:
Q  212 tttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 311  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3094045 tttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 3094144  T
Q  312 tttcgtggcaatgcccaaaattgtgcaagacagattatcaacc 354  Q
    |||| ||||| |||||||||||||||||| |||| ||||||||    
T  3094145 tttcatggcactgcccaaaattgtgcaaggcagactatcaacc 3094187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 207 - 339
Target Start/End: Original strand, 25855097 - 25855229
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  25855097 tgttgtttttgaatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 25855196  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaa 339  Q
    ||||||||||||||| |||||||||||||||||    
T  25855197 agacgtttcgtggcactgcccaaaattgtgcaa 25855229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 212 - 411
Target Start/End: Original strand, 38620624 - 38620822
Alignment:
Q  212 tttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 311  Q
    |||||| |||| ||||| |||||||||||||||||||||| ||||||| ||||||||| ||| ||||||||||| ||||||| || ||||||||||||||    
T  38620624 tttttgaattttcaaactgttgtatttggatttccaaattttattatctaccgaagttattattaggttgagtcgcgaccagatcactctctttaagacg 38620723  T
Q  312 tttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgcatt 411  Q
    |||||| ||| || ||||||||||||||| |||| ||||||| |||||||||||| ||||||||||| |||||||||||||| || ||||||||||||||    
T  38620724 tttcgt-gcattgtccaaaattgtgcaaggcagactatcaactacgccgcctccaagataaaacaagtccaactacaactgtgcggttaactactgcatt 38620822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 207 - 409
Target Start/End: Original strand, 10140015 - 10140217
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    ||||||||||| ||| ||||||   ||||||||||||| |||  ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  10140015 tgttgtttttgtattcccaaactactgtatttggattttcaagatctattatctaccgaagttgttactaggttgagtcacgatcaggtcgctctcttta 10140114  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    | ||||||||||||| | | |||||||||||||| ||||  |||||||||||| |||| ||||||||||||||||| || ||||||| || |||||||||    
T  10140115 acacgtttcgtggcactactcaaaattgtgcaaggcagacaatcaaccacgccacctctaggataaaacaagcccagctgcaactgtgcggttaactact 10140214  T
Q  407 gca 409  Q
    |||    
T  10140215 gca 10140217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 407 - 544
Target Start/End: Original strand, 25845430 - 25845567
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatac 506  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||    
T  25845430 gcattagtctcatcctattggatgtgtttaagactttctttctagtaattcctttcgtcaaaggattgactaattctttattaatacgtgcacgatatac 25845529  T
Q  507 tttaaccgttccttttagagctctctaattattctgtg 544  Q
    ||||| ||||||||||||||||||||||| ||| ||||    
T  25845530 tttaatcgttccttttagagctctctaatcattatgtg 25845567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 209 - 378
Target Start/End: Complemental strand, 18784716 - 18784547
Alignment:
Q  209 ttgtttttggatttccaaacagttgtat-ttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaa 307  Q
    |||||||||||||||||||| ||||||| |||| |||| |||||||||| || | ||||||||||||||||||||||||||| ||||||||||| |||||    
T  18784716 ttgtttttggatttccaaactgttgtatgttggttttctaaattctattttctagcgaagttgttactaggttgagtcacgatcaggtcgctct-tttaa 18784618  T
Q  308 gacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaag 378  Q
    ||| |||||||||| |||| ||||||||||||| |||| ||||||||||||||||||||| ||||||||||    
T  18784617 gacatttcgtggcactgcctaaaattgtgcaaggcagactatcaaccacgccgcctccagaataaaacaag 18784547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 18 - 186
Target Start/End: Complemental strand, 47460845 - 47460677
Alignment:
Q  18 tctatgacaaaaaaggcattcagattccctaatatcttccaccccttcattctcatccaacaacatagcagaacaatccttaaatggacagtagaattta 117  Q
    |||||||||| ||  ||| ||||||||||||| ||||||    ||||||| |||||| | |||||||||||||||||||||||| || || ||||| |||    
T  47460845 tctatgacaagaagcgcactcagattccctaacatcttctcttccttcatcctcatcaagcaacatagcagaacaatccttaaaggggcaatagaactta 47460746  T
Q  118 ggaacagtaacaaaaagagcttcacacaatgcatcattccacttatcaaacaattctttaggaagcaat 186  Q
    |||||||||| ||||| ||| ||||| |||||||||||||||||||||| |||||||||||||||||||    
T  47460745 ggaacagtaagaaaaaaagcctcacataatgcatcattccacttatcaatcaattctttaggaagcaat 47460677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 264 - 410
Target Start/End: Original strand, 12259979 - 12260125
Alignment:
Q  264 gaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcct 363  Q
    |||||||||||| ||||||| |||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||| ||    
T  12259979 gaagttgttacttggttgagacacgaccatgtcgctctctttaagacgtttcgtgacactgcccaaaattgtgcaagacagactatcaaccacgccgtct 12260078  T
Q  364 ccaggataaaacaagcccaactacaactgttcgattaactactgcat 410  Q
      |||||||||||| | ||  ||||||| | || |||||||||||||    
T  12260079 ttaggataaaacaaacacatgtacaactatgcggttaactactgcat 12260125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 207 - 318
Target Start/End: Original strand, 16832027 - 16832138
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||  ||||||||||||  ||||||||||||||||||||||||||||    
T  16832027 tgttgtatttggatttccaaaccgttgtatttggatttccaaattctattatctacttaagttgttactatattgagtcacgaccaggtcgctctcttta 16832126  T
Q  307 agacgtttcgtg 318  Q
    ||||||| ||||    
T  16832127 agacgttccgtg 16832138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 18 - 187
Target Start/End: Complemental strand, 47467511 - 47467342
Alignment:
Q  18 tctatgacaaaaaaggcattcagattccctaatatcttccaccccttcattctcatccaacaacatagcagaacaatccttaaatggacagtagaattta 117  Q
    ||||||||||||  | || |||||||||||||||||||   |  ||||||| ||||||| || ||||||||| ||||||||||| ||||| ||||| |||    
T  47467511 tctatgacaaaagggtcactcagattccctaatatcttgtccatcttcattttcatccagcatcatagcagagcaatccttaaagggacaatagaactta 47467412  T
Q  118 ggaacagtaacaaaaagagcttcacacaatgcatcattccacttatcaaacaattctttaggaagcaatg 187  Q
    ||||||| || ||||| ||| ||||||||||||||||||||| |||||| ||| ||||| ||||||||||    
T  47467411 ggaacagcaagaaaaaaagcctcacacaatgcatcattccacctatcaatcaactcttttggaagcaatg 47467342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 207 - 290
Target Start/End: Original strand, 25843738 - 25843821
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgac 290  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  25843738 tgttgtttttgaatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgac 25843821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 256 - 378
Target Start/End: Original strand, 8900229 - 8900351
Alignment:
Q  256 tatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaacca 355  Q
    |||| ||||||||||||||||||||||||||||||||  ||||||||||||| |||||| ||| || || | ||| |||||||| ||| | |||||| ||    
T  8900229 tatctaccgaagttgttactaggttgagtcacgaccatatcgctctctttaaaacgttttgtgacactgtctaaagttgtgcaaaacatactatcaatca 8900328  T
Q  356 cgccgcctccaggataaaacaag 378  Q
    | |||||||||||||||||||||    
T  8900329 caccgcctccaggataaaacaag 8900351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 263 - 409
Target Start/End: Original strand, 11806341 - 11806487
Alignment:
Q  263 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcc 362  Q
    ||||||||||| ||||||||||||| ||||| ||||||||||||||| |||||||| || ||| |||| | || |||| |||| ||||||||||||||||    
T  11806341 cgaagttgttattaggttgagtcacaaccagatcgctctctttaagatgtttcgtgacactgcgcaaagtggtacaaggcagactatcaaccacgccgcc 11806440  T
Q  363 tccaggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    | ||| |||||| |||  ||||||||| ||| || |||| |||||||    
T  11806441 ttcagaataaaagaagttcaactacaattgtgcggttaaatactgca 11806487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 271 - 377
Target Start/End: Complemental strand, 2493923 - 2493817
Alignment:
Q  271 ttactaggttgagtcacgacc-aggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccagga 369  Q
    ||||||||||||||| | | | |||||||||||||||||||||||||||||| |||||||||||||||||| || | ||||||||||| |||| ||||||    
T  2493923 ttactaggttgagtcgcaaactaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaag-caaactatcaaccacggcgcccccagga 2493825  T
Q  370 taaaacaa 377  Q
    ||||||||    
T  2493824 taaaacaa 2493817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 277 - 377
Target Start/End: Original strand, 10106100 - 10106199
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||||||||||||||||||||||| |||| | ||| || |||||||||  ||| || ||||||||||| |||||||||||||||    
T  10106100 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 10106198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 292 - 376
Target Start/End: Original strand, 12906166 - 12906248
Alignment:
Q  292 aggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  12906166 aggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaag-cagactatcaaccacgacgcc-ccaggataaaaca 12906248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 277 - 376
Target Start/End: Original strand, 38734272 - 38734370
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||||||||||||||||||||||| |||| | |||  | |||||||||  ||| || ||||||||||| |||||||||||||||    
T  38734272 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccc-tagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 38734370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 311 - 409
Target Start/End: Original strand, 8137969 - 8138067
Alignment:
Q  311 gtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    ||||||||||| |||| ||| ||||||||| |||| |||||||||   ||||||||||||||||||||| || |||||||||| || ||||||||||||    
T  8137969 gtttcgtggcattgcctaaagttgtgcaaggcagactatcaaccatatcgcctccaggataaaacaagctcagctacaactgtgcggttaactactgca 8138067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 407 - 523
Target Start/End: Original strand, 11810583 - 11810696
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatac 506  Q
    ||||||| | |||||||||||||||||||| |||||||||   ||| |||| ||||||||||||||  | |||||||| |||||||||| || ||| ||     
T  11810583 gcattagccccatcctattggatgtgtttaggactttctt---agttattcatttcgtcaaaggatcaactaattcttcatcagtacgtacatgatctat 11810679  T
Q  507 tttaaccgttcctttta 523  Q
    |||||||||||||||||    
T  11810680 tttaaccgttcctttta 11810696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 271 - 376
Target Start/End: Complemental strand, 27761944 - 27761839
Alignment:
Q  271 ttactaggttgagtcac-gaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccagga 369  Q
    ||||||||||||||| | ||| ||||| |||||||||| ||||||||||||| || ||||||||||||||| |||| ||||||||||| || | ||||||    
T  27761944 ttactaggttgagtcgcagactaggtcactctctttaaaacgtttcgtggcactgtccaaaattgtgcaag-cagactatcaaccacgacgtccccagga 27761846  T
Q  370 taaaaca 376  Q
    |||||||    
T  27761845 taaaaca 27761839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 270 - 391
Target Start/End: Original strand, 5346652 - 5346773
Alignment:
Q  270 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccagga 369  Q
    ||||||||||||||| || | ||||||| ||||||||| |||||| |||||| || ||||| |||| ||| ||||| |||||| ||||||||||||| ||    
T  5346652 gttactaggttgagttacaatcaggtcgttctctttaaaacgttttgtggcactgtccaaatttgtacaatacagactatcaatcacgccgcctccaaga 5346751  T
Q  370 taaaacaagcccaactacaact 391  Q
    | |||||||  || ||||||||    
T  5346752 tgaaacaagttcagctacaact 5346773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 292 - 393
Target Start/End: Complemental strand, 33381004 - 33380905
Alignment:
Q  292 aggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaact 391  Q
    ||||||||||||||||||||||||||| || ||| |||||||||||||| |||| ||||||||||| || | ||| |||||||| |||||| ||||||||    
T  33381004 aggtcgctctctttaagacgtttcgtgacactgctcaaaattgtgcaag-cagactatcaaccacgacgtccccaagataaaac-agcccagctacaact 33380907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 323 - 411
Target Start/End: Original strand, 16833526 - 16833614
Alignment:
Q  323 tgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgcatt 411  Q
    ||||||||||| ||||||||| | |||||||| |||| | ||||||||||||||  | || ||||||||||||||||||||||||||||    
T  16833526 tgcccaaaattatgcaagacaaactatcaacctcgccacatccaggataaaacagcctcagctacaactgttcgattaactactgcatt 16833614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 277 - 376
Target Start/End: Original strand, 13890810 - 13890908
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||||||||||||||||||||| | |||| | ||| || |||||||||  ||| || ||||||| ||| |||||||||||||||    
T  13890810 ggttgagtcacgaccaggtcgctctctttaagacgttttgcggcactaccc-aagttgtgcaaggtagactaacaaccacaccgtctccaggataaaaca 13890908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 277 - 376
Target Start/End: Complemental strand, 39747263 - 39747165
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    ||||||||||||||||||| |||||||||||||||||||| |||| | ||| || |||||||||  ||| || |||||||| || |||||||||||||||    
T  39747263 ggttgagtcacgaccaggttgctctctttaagacgtttcgcggcactaccc-aagttgtgcaaggtagactagcaaccacgtcgtctccaggataaaaca 39747165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 347 - 409
Target Start/End: Original strand, 25843822 - 25843884
Alignment:
Q  347 tatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||| || ||||||||||||    
T  25843822 tatcaaccacgccgcctccagtataaaacaagcccagctacaactgtgcggttaactactgca 25843884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 5724979 - 5725074
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || ||||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  5724979 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 5725074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 36684810 - 36684715
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  36684810 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 36684715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 271 - 393
Target Start/End: Complemental strand, 24159904 - 24159783
Alignment:
Q  271 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccagga 369  Q
    |||||||| |||||| || || ||||||||||||||||||||||||||   | |||||||||||||||||| |||| ||||||| ||| || | ||||||    
T  24159904 ttactaggctgagtcgcggactaggtcgctctctttaagacgtttcgtaatactgcccaaaattgtgcaag-cagactatcaacgacgacgtccccagga 24159806  T
Q  370 taaaacaagcccaactacaactgt 393  Q
    |||||| ||| || ||||||||||    
T  24159805 taaaac-agctcagctacaactgt 24159783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 277 - 376
Target Start/End: Complemental strand, 26651264 - 26651166
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| |||||||||||| |||| | |||| | ||| || |||||||||  ||| || ||||||||||| |||||||||||||||    
T  26651264 ggttgagtcacgaccaggtcactctctttaagatgttttgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 26651166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 271 - 376
Target Start/End: Original strand, 36724698 - 36724803
Alignment:
Q  271 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccagga 369  Q
    |||||||| ||||||| | || |||||||||||||||||||||||  ||||| | |||||||||||||||| ||||  |||||||||| |||| ||| ||    
T  36724698 ttactaggctgagtcatggactaggtcgctctctttaagacgttttatggcactacccaaaattgtgcaag-cagacaatcaaccacgacgcccccaaga 36724796  T
Q  370 taaaaca 376  Q
    |||||||    
T  36724797 taaaaca 36724803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 3584601 - 3584696
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| |||||||||||||||| || ||   || ||||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  3584601 tgagtcacgaccaggtcgctttctttaagacgtttcgcgg-aactacctaaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 3584696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 11251208 - 11251113
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  11251208 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 11251113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 34318319 - 34318224
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    ||||||||||||| ||||||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  34318319 tgagtcacgaccaagtcgctctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 34318224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 37404511 - 37404416
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  37404511 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 37404416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 277 - 376
Target Start/End: Complemental strand, 5602523 - 5602425
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    ||||||||||||||||| ||||||||||||||||||||||  ||| | |||  | |||||||||  ||| || ||||||||||| ||||| |||||||||    
T  5602523 ggttgagtcacgaccagatcgctctctttaagacgtttcgctgcactaccc-tagttgtgcaaggtagactaacaaccacgccgtctccaagataaaaca 5602425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 271 - 373
Target Start/End: Complemental strand, 4633031 - 4632929
Alignment:
Q  271 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggat 370  Q
    |||||||||||||||||||| | ||||||||||||||||||||| | |||| |  || || |||||||||  || ||||||| |||| | |||||| |||    
T  4633031 ttactaggttgagtcacgactatgtcgctctctttaagacgttttgcggcactatccgaatttgtgcaaggtaggttatcaatcacgactcctccatgat 4632932  T
Q  371 aaa 373  Q
    |||    
T  4632931 aaa 4632929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 292 - 377
Target Start/End: Complemental strand, 23193306 - 23193222
Alignment:
Q  292 aggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaa 377  Q
    |||||||||||| ||||||||||| |||||   ||||||||| |||||| |||| ||||||||||| |||| ||| ||||||||||    
T  23193306 aggtcgctctctataagacgtttcatggcacaacccaaaattatgcaag-cagactatcaaccacgacgcccccatgataaaacaa 23193222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 5730105 - 5730200
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| |||||||||||||||| || ||   || ||||||||||||  ||| || ||||| | ||| |||||||||||||||    
T  5730105 tgagtcacgaccaggtcgctttctttaagacgtttcgcgg-aactacctaaattgtgcaaggtagactagcaaccgcaccgtctccaggataaaaca 5730200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 404
Target Start/End: Complemental strand, 25779376 - 25779288
Alignment:
Q  316 gtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaacta 404  Q
    |||||| || |||||||||||||||| | ||||||| ||||||| | | |||||||||||||  ||||| |||| ||| ||||||||||    
T  25779376 gtggcactgtccaaaattgtgcaagaaatattatcagccacgccacattcaggataaaacaattccaacgacaattgtacgattaacta 25779288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 37409632 - 37409537
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| |||||  ||||||||||||||    
T  37409632 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtttccaggataaaaca 37409537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 277 - 376
Target Start/End: Original strand, 14582096 - 14582194
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||| |||| ||||||||||||||||||| |||||| |||| | |||  | |||||||||  ||| || ||||||| ||| |||||||||||||||    
T  14582096 ggttgagttacgatcaggtcgctctctttaagaagtttcgcggcactaccc-tagttgtgcaaggtagactaacaaccacaccgtctccaggataaaaca 14582194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 315
Target Start/End: Complemental strand, 8267929 - 8267891
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagacgtttc 315  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  8267929 ggttgagtcacgaccaggtcgctttctttaagacgtttc 8267891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 271 - 316
Target Start/End: Complemental strand, 19422982 - 19422937
Alignment:
Q  271 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcg 316  Q
    ||||| ||||||||||||| ||| ||||||||||||||||||||||    
T  19422982 ttactgggttgagtcacgatcagatcgctctctttaagacgtttcg 19422937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 280 - 321
Target Start/End: Original strand, 27716443 - 27716484
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggca 321  Q
    |||||||||||||||||||| |||||||||||||||| ||||    
T  27716443 tgagtcacgaccaggtcgctttctttaagacgtttcgcggca 27716484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 269 - 406
Target Start/End: Complemental strand, 28434680 - 28434544
Alignment:
Q  269 tgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccagg 368  Q
    |||||||||||||||| || | || | | |||| ||||||||||||| || || || | ||| |||||||  ||||| ||||||||  |||| |||||||    
T  28434680 tgttactaggttgagttacaagcatgccactctttttaagacgtttcatgacactgtc-aaacttgtgcaccacagactatcaaccttgccgtctccagg 28434582  T
Q  369 ataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||  ||||||||| ||| |  |||||||||    
T  28434581 ataaaacaagttcaactacaattgtgcagttaactact 28434544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 207 - 256
Target Start/End: Original strand, 46696596 - 46696645
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctatt 256  Q
    |||||||||||||||| ||||| ||| ||||| |||||||||||||||||    
T  46696596 tgttgtttttggattttcaaactgttttatttagatttccaaattctatt 46696645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 292 - 376
Target Start/End: Original strand, 31063968 - 31064050
Alignment:
Q  292 aggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||| ||||||||||| |  |||||||||| |||| || | ||||||||||| || | |||||||||||||    
T  31063968 aggtcgctctctttaagaggtttcgtggcactttccaaaattgttcaag-caaactatcaaccacgacgtc-ccaggataaaaca 31064050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 312 - 374
Target Start/End: Complemental strand, 28858126 - 28858065
Alignment:
Q  312 tttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaa 374  Q
    |||||||||| ||| |||||||||||||| |||| ||||||||||| || | |||||||||||    
T  28858126 tttcgtggcattgctcaaaattgtgcaag-cagactatcaaccacgacgtccccaggataaaa 28858065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 321
Target Start/End: Complemental strand, 11387925 - 11387884
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggca 321  Q
    |||||||||||||||||||| | |||||||||||||| ||||    
T  11387925 tgagtcacgaccaggtcgctttttttaagacgtttcgcggca 11387884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 207 - 256
Target Start/End: Original strand, 12259911 - 12259959
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctatt 256  Q
    ||||||||||||||||||| || ||| ||||||||||||| |||||||||    
T  12259911 tgttgtttttggatttccacactgttatatttggatttcc-aattctatt 12259959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 340
Target Start/End: Complemental strand, 25661899 - 25661858
Alignment:
Q  299 tctctttaagacgtttcgtggcaatgcccaaaattgtgcaag 340  Q
    |||||||||||||||| |||||| | ||||||||||||||||    
T  25661899 tctctttaagacgttttgtggcactacccaaaattgtgcaag 25661858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 32987252 - 32987347
Alignment:
Q  292 aggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaa 389  Q
    ||||| |||||||||||| |||| |||||| |||| ||||||||||||| |||| |||||| || | |||| | |||| ||||| || ||||||||||    
T  32987252 aggtcactctctttaagatgttttgtggcactgcctaaaattgtgcaag-cagactatcaatcatgacgcccctaggagaaaac-agtccaactacaa 32987347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 472
Target Start/End: Complemental strand, 37408591 - 37408526
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggat 472  Q
    ||||||||| ||||||| ||||||| ||| ||||||||| |||  | | |||||||||||||||||    
T  37408591 gcattagtctcatcctactggatgtatttgtgactttctctctgtttagtcctttcgtcaaaggat 37408526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 310
Target Start/End: Complemental strand, 41098050 - 41098017
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagac 310  Q
    ||||||||||||||||||||||| ||||||||||    
T  41098050 ggttgagtcacgaccaggtcgctttctttaagac 41098017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 8900162 - 8900206
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaatt 251  Q
    |||||||||||||||| ||||| |||| ||||| |||||||||||    
T  8900162 tgttgtttttggattttcaaactgttgcatttgaatttccaaatt 8900206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 28434753 - 28434705
Alignment:
Q  208 gttgtttttggatttccaaacagttgtatttggatttccaaattctatt 256  Q
    ||||||||||||||| |||||  ||||||||| |||| |||||||||||    
T  28434753 gttgtttttggattttcaaactattgtatttgaattttcaaattctatt 28434705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 183; Significance: 1e-98; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 10056 - 9854
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  10056 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 9957  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  9956 agacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgttcgattaactact 9857  T
Q  407 gca 409  Q
    |||    
T  9856 gca 9854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 179; Significance: 2e-96; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 29168142 - 29167940
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  29168142 tgttgtttttggatttccaaactgttgtatttgaatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 29168043  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29168042 agacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 29167943  T
Q  407 gca 409  Q
    |||    
T  29167942 gca 29167940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 175; E-Value: 6e-94
Query Start/End: Original strand, 207 - 409
Target Start/End: Original strand, 556621 - 556823
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  556621 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 556720  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    |||||||| |||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  556721 agacgttttgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagctcagctacaactgttcgattaactact 556820  T
Q  407 gca 409  Q
    |||    
T  556821 gca 556823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 175; E-Value: 6e-94
Query Start/End: Original strand, 207 - 409
Target Start/End: Original strand, 561393 - 561595
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  561393 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 561492  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    |||||||| |||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  561493 agacgttttgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagctcagctacaactgttcgattaactact 561592  T
Q  407 gca 409  Q
    |||    
T  561593 gca 561595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 173; E-Value: 9e-93
Query Start/End: Original strand, 207 - 407
Target Start/End: Original strand, 41996591 - 41996791
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  41996591 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggttgctctcttta 41996690  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  41996691 agacgtttcgtggcactgcccaaaattgtgtaagacagactatcaaccacgccgcctccaggataaaacaagcccaactacaactgtgcggttaactact 41996790  T
Q  407 g 407  Q
    |    
T  41996791 g 41996791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 173; E-Value: 9e-93
Query Start/End: Original strand, 207 - 407
Target Start/End: Original strand, 42001360 - 42001560
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  42001360 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 42001459  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||    
T  42001460 agacgtttcgtggcactgcccaaaattgtgtaagacagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgtgcggttaactact 42001559  T
Q  407 g 407  Q
    |    
T  42001560 g 42001560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 207 - 409
Target Start/End: Original strand, 12102950 - 12103153
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttcc-aaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 305  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  12102950 tgttgtttttggatttccaaactgttgtatttggatttcccaaattctattatctaccgaagttgttactaggttgagttacgaccaggtcgctctcttt 12103049  T
Q  306 aagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactac 405  Q
    |||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  12103050 aagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccaactacaaatgtgcgattaactac 12103149  T
Q  406 tgca 409  Q
    ||||    
T  12103150 tgca 12103153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 207 - 409
Target Start/End: Original strand, 26667198 - 26667400
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||| |||||||||||  ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  26667198 tgttgtttttagatttccaaactattgtatttggagttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 26667297  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||    
T  26667298 agacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagtccagctgcaactgttcgattaactact 26667397  T
Q  407 gca 409  Q
    |||    
T  26667398 gca 26667400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 207 - 409
Target Start/End: Original strand, 26938795 - 26938997
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||| |||||||||||  ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  26938795 tgttgtttttagatttccaaactattgtatttggagttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 26938894  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||    
T  26938895 agacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagtccagctgcaactgttcgattaactact 26938994  T
Q  407 gca 409  Q
    |||    
T  26938995 gca 26938997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 212 - 409
Target Start/End: Original strand, 36428640 - 36428837
Alignment:
Q  212 tttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 311  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  36428640 tttttggatttccaaactgttgtatttggatttccaaattctattatctaacgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 36428739  T
Q  312 tttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    ||| | || | |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  36428740 ttttgcggaactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgttcgattaactactgca 36428837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 12502069 - 12501866
Alignment:
Q  207 tgttgtttttggatttccaaacagtt-gtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 305  Q
    |||||||||||||||| ||||| ||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||    
T  12502069 tgttgtttttggattttcaaactgttcgtatttggatttccaaattctattatctactgaagttgttactaggttgagtcatgaccaggtcgctctcttt 12501970  T
Q  306 aagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactac 405  Q
    |||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  12501969 aagacgtttcgtggcactgcccaaaattgtgcaaaacagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgttcggttaactac 12501870  T
Q  406 tgca 409  Q
    ||||    
T  12501869 tgca 12501866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 230 - 409
Target Start/End: Complemental strand, 36942411 - 36942232
Alignment:
Q  230 gttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaa 329  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  36942411 gttgtttttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaa 36942312  T
Q  330 aattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  36942311 aattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgttcgattaactactgca 36942232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 207 - 409
Target Start/End: Original strand, 39522974 - 39523177
Alignment:
Q  207 tgttgtttttggatttccaaacagtt-gtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 305  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  39522974 tgttgtttttggatttccaaactgttagtatttggatttccaaattctattatctatcgaagttgttactaggttgagtcacgaccaggtcgctctcttt 39523073  T
Q  306 aagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactac 405  Q
    ||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| || ||||||| || ||||||||    
T  39523074 aagacgtttcgtggcaccgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaagtccagctgcaactgtgcggttaactac 39523173  T
Q  406 tgca 409  Q
    ||||    
T  39523174 tgca 39523177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 6155588 - 6155386
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    ||||| |||||| ||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||||    
T  6155588 tgttgattttggttttccaaactgttgtatttggatttccaaattctattatctaccgaaattgttactaggttgagtcacgatcaggtcgctctcttta 6155489  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| || |||||||| | ||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  6155488 agacgtttcgtggcactgtccaaaattttacaagacagactatcaaccacaccgcctccaggataaaacaagcccagctacaactgttcgattaactact 6155389  T
Q  407 gca 409  Q
    |||    
T  6155388 gca 6155386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 207 - 409
Target Start/End: Original strand, 39518336 - 39518538
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  39518336 tgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctatcgaagttgttactaggttgagtcacgaccaggtcgctctcttta 39518435  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    |||||||||||||||  ||||||||||||||| | |||| |||||||||||||||||||||||||||||||| ||| || ||||||| || |||||||||    
T  39518436 agacgtttcgtggcaccgcccaaaattgtgcatggcagactatcaaccacgccgcctccaggataaaacaagtccagctgcaactgtgcggttaactact 39518535  T
Q  407 gca 409  Q
    |||    
T  39518536 gca 39518538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 12045309 - 12045106
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtattt-ggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 305  Q
    |||||||||||||||||||||| ||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  12045309 tgttgtttttggatttccaaactgttgtattttggttttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgccctcttt 12045210  T
Q  306 aagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactac 405  Q
    |||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||  | |||||||||| || ||||||||    
T  12045209 aagacgtttcgtggcactgcccaaaattgtgcaagacagactatcgaccacgccgcctccaggataaaacaagcatagctacaactgtgcggttaactac 12045110  T
Q  406 tgca 409  Q
    ||||    
T  12045109 tgca 12045106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 230 - 409
Target Start/End: Complemental strand, 36937657 - 36937478
Alignment:
Q  230 gttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaa 329  Q
    ||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  36937657 gttgtttttggatttccaaattctattatctaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaa 36937558  T
Q  330 aattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  36937557 aattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgttcgattaactactgca 36937478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 204 - 393
Target Start/End: Complemental strand, 37248967 - 37248778
Alignment:
Q  204 ttctgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctct 303  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  37248967 ttctgttgtttttggatttccaaactgttatatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctct 37248868  T
Q  304 ttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgt 393  Q
    ||||||| |||||||||| | || ||||||||||||| |||| |||||||||||||||||||||||||||||||||||| || |||||||    
T  37248867 ttaagacatttcgtggcactacctaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgt 37248778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 209 - 409
Target Start/End: Original strand, 36423565 - 36423765
Alignment:
Q  209 ttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaag 308  Q
    |||||||||||||| ||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  36423565 ttgtttttggattttcaaactgttgtatttggatttccaaaatctattatctaccgaagttgttactaggttgagtcgcgaccaggtcgctctctttaag 36423664  T
Q  309 acgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgc 408  Q
    |||||||| |||| |||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||| |||| |||||| ||||||||| |||    
T  36423665 acgtttcgcggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccagaataaaacaagcccagctactactgtttgattaactaatgc 36423764  T
Q  409 a 409  Q
    |    
T  36423765 a 36423765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 207 - 406
Target Start/End: Original strand, 7451684 - 7451883
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||||||||| ||||| |||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  7451684 tgttgtttttggattttcaaactgttgtatttgaattttcaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 7451783  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| || ||||||||||||||| |||| |||||||||||| |||||||||||||||||||| || || ||||||| || |||||||||    
T  7451784 agacgtttcgtggcactgtccaaaattgtgcaaggcagactatcaaccacgctgcctccaggataaaacaagctcagctgcaactgtgcggttaactact 7451883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 41587329 - 41587127
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    ||||||||||||||||| |||| |||||||||| |||| |||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||    
T  41587329 tgttgtttttggatttctaaactgttgtatttgaattttcaaattctattatctaccgaagttgttactagtttgagtcacgaccaggttgctctcttta 41587230  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    |||||||||||| || ||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||| || |||||||||    
T  41587229 agacgtttcgtgacactgttcaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaagctcagctacaactgtgcggttaactact 41587130  T
Q  407 gca 409  Q
    |||    
T  41587129 gca 41587127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 206 - 409
Target Start/End: Original strand, 3665856 - 3666060
Alignment:
Q  206 ctgttgtttttggatttccaaacagttgtattt-ggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 304  Q
    ||||||||||||||||||||||| ||||||||| || ||| ||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||    
T  3665856 ctgttgtttttggatttccaaactgttgtattttggtttttcaaattctattttctaccgaagttgttactaggttgagtcacgactaggtcgctctctt 3665955  T
Q  305 taagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaacta 404  Q
     |||||||||||||||| |||||||||||||||||| |||| ||||||||||||| |||| ||||||||||||| |||||||||||||| || |||||||    
T  3665956 caagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccacctctaggataaaacaagtccaactacaactgtgcggttaacta 3666055  T
Q  405 ctgca 409  Q
    |||||    
T  3666056 ctgca 3666060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 207 - 404
Target Start/End: Complemental strand, 10759992 - 10759792
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattc----tattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctc 302  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    ||||||| |||||||||||||||||||||||||||||||||||||||||     
T  10759992 tgttgtttttggatttccaaactgttgtatttggatttccaaattcattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctct- 10759894  T
Q  303 tttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaac 402  Q
    |||||||||||| |||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||  ||||||||| || |||||    
T  10759893 tttaagacgttttgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccatttacaactgtgcggttaac 10759794  T
Q  403 ta 404  Q
    ||    
T  10759793 ta 10759792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 207 - 411
Target Start/End: Complemental strand, 6514769 - 6514566
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    ||||||||||| ||||  |||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||||    
T  6514769 tgttgtttttg-attttaaaactgttgtatttggatttccaaattctattatctaccaaagttgttactaggttgagtcacgaccaagtcactctcttta 6514671  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| ||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||  | ||||||||||  | |||||||||    
T  6514670 agacgtttcgtggcactgcccaaaattttgcaaggcagactatcaaccacgccgcctccaggataaaacaagcttagctacaactgtgtggttaactact 6514571  T
Q  407 gcatt 411  Q
    |||||    
T  6514570 gcatt 6514566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 207 - 379
Target Start/End: Complemental strand, 37652999 - 37652827
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||    
T  37652999 tgttgtttttggatttccaaattgttgtatttggatttccaaattctattatctaccgaagttgttattaggttgagtcacgatcaggtcgctctcttta 37652900  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagc 379  Q
    |||||||||||| || || ||||||||||||||| |||| ||||||||||||| |||||||||||||||||||    
T  37652899 agacgtttcgtgacattgtccaaaattgtgcaaggcagactatcaaccacgccacctccaggataaaacaagc 37652827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 214 - 406
Target Start/End: Original strand, 40147828 - 40148020
Alignment:
Q  214 tttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtt 313  Q
    |||| ||||||||||  ||||||||||||||||||||||||||||| | ||||||||||| |||||||||||| || ||||||||||||||||||| |||    
T  40147828 tttgaatttccaaactattgtatttggatttccaaattctattatctatcgaagttgttattaggttgagtcatgatcaggtcgctctctttaagatgtt 40147927  T
Q  314 tcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| || || ||| ||||| ||||||||||    
T  40147928 tcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaataagctcagcttcaattgttcaattaactact 40148020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 212 - 409
Target Start/End: Complemental strand, 11981443 - 11981247
Alignment:
Q  212 tttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttga-gtcacgaccaggtcgctctctttaagac 310  Q
    ||||||||||| ||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||  | | |||||||||||| ||||||||||    
T  11981443 tttttggattttcaaactgttgtagttggatttccaaattctattatctaccgaagttgttactaggttgattttatgaccaggtcgctttctttaagac 11981344  T
Q  311 gtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    |||| |||||| |||||||||||||||||||||||  |||||||||||||||||||| ||||||||||| || ||||||||||||||||||||| ||||    
T  11981343 gttttgtggcactgcccaaaattgtgcaagacaga--atcaaccacgccgcctccagaataaaacaagcacatctacaactgttcgattaactattgca 11981247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 407 - 544
Target Start/End: Original strand, 26668951 - 26669088
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatac 506  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26668951 gcattagtctcatcctattggatgtgtttaagactttctttctagtaattcctttcgtcaaaggattgactaattctttatcagtacgtgcacgatatac 26669050  T
Q  507 tttaaccgttccttttagagctctctaattattctgtg 544  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  26669051 tttaaccgttccttttagagctctctaatcattctgtg 26669088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 407 - 544
Target Start/End: Original strand, 26940548 - 26940685
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatac 506  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26940548 gcattagtctcatcctattggatgtgtttaagactttctttctagtaattcctttcgtcaaaggattgactaattctttatcagtacgtgcacgatatac 26940647  T
Q  507 tttaaccgttccttttagagctctctaattattctgtg 544  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  26940648 tttaaccgttccttttagagctctctaatcattctgtg 26940685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 20181233 - 20181030
Alignment:
Q  207 tgttgtttttggatttcc-aaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 305  Q
    ||||||||||||||||   |||| |||||||||||||||||||||||||||||| || ||| |||||| |||||||||||||||||||||| ||||||||    
T  20181233 tgttgtttttggattttttaaaccgttgtatttggatttccaaattctattatctactgaaattgttattaggttgagtcacgaccaggtcactctcttt 20181134  T
Q  306 aagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactac 405  Q
    |||||||||||||||| || |||||||| ||||||||||| ||| ||||||||| |||||| |||||||||||| ||||||||| ||| || ||||||||    
T  20181133 aagacgtttcgtggcattgtccaaaattatgcaagacagactattaaccacgccacctccatgataaaacaagctcaactacaattgtgcggttaactac 20181034  T
Q  406 tgca 409  Q
    ||||    
T  20181033 tgca 20181030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 12042101 - 12041899
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggt--tgagtcacgaccaggtcgctctctt 304  Q
    |||||||||||||||| ||||| |||  |||||||||| |||||| | ||||| || ||||||||||||||||  |||||||||||||||||| ||||||    
T  12042101 tgttgtttttggattttcaaactgtt--atttggattttcaaattatgttatctactgaagttgttactaggtcatgagtcacgaccaggtcgttctctt 12042004  T
Q  305 taagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaacta 404  Q
    ||||||||||||||||| ||||||||| | |||||| || | |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  12042003 taagacgtttcgtggcactgcccaaaaatatgcaaggcaaactatcaaccacgccgcctccaggataaaacaagtccagctacaactgttcgattaacta 12041904  T
Q  405 ctgca 409  Q
    |||||    
T  12041903 ctgca 12041899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 207 - 393
Target Start/End: Complemental strand, 35680047 - 35679858
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattc----tattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctc 302  Q
    |||||||||||||||| ||||  |||||||||||||||||||||||    ||||||| ||||||| |||||||||||||||||| | | |||||||||||    
T  35680047 tgttgtttttggattttcaaattgttgtatttggatttccaaattcattatattatctaccgaagctgttactaggttgagtcatggc-aggtcgctctc 35679949  T
Q  303 tttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgt 393  Q
    ||||||||||||||||||| || | ||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  35679948 tttaagacgtttcgtggcactgtcaaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagctcaactacaactgt 35679858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 407 - 544
Target Start/End: Original strand, 558443 - 558580
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatac 506  Q
    ||||||||| |||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  558443 gcattagtcccatcctgttggatgtgtttaggactttctttctagcaattcctttcgtcaaaggattggctaattctttatcagtacgtgcacgatatac 558542  T
Q  507 tttaaccgttccttttagagctctctaattattctgtg 544  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  558543 tttaaccgttccttttagagctctctaatcattctgtg 558580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 407 - 544
Target Start/End: Original strand, 41998389 - 41998526
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatac 506  Q
    ||||||||| |||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  41998389 gcattagtcccatcttgttggatgtgtttaggactttctttctagtaattcctttcgtcaaaggattgactaattctttatcagtacgtgtacgatatac 41998488  T
Q  507 tttaaccgttccttttagagctctctaattattctgtg 544  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  41998489 tttaaccgttccttttagagctctctaatcattctgtg 41998526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 211 - 409
Target Start/End: Complemental strand, 32461702 - 32461516
Alignment:
Q  211 gtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagac 310  Q
    |||||||||||||||||   ||||||||||||||| ||||||||||||| ||||||||         |||||||||||||||||||||||||||||||||    
T  32461702 gtttttggatttccaaa---ttgtatttggatttctaaattctattatctaccgaagt---------gttgagtcacgaccaggtcgctctctttaagac 32461615  T
Q  311 gtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    |||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  || || ||||||| || ||||||||||||    
T  32461614 gttttgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaagttcagctgcaactgtgcggttaactactgca 32461516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 419 - 544
Target Start/End: Original strand, 36425326 - 36425451
Alignment:
Q  419 tcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatactttaaccgttcc 518  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||    
T  36425326 tcctattggatgtgtttaggactttttttctagtaattcctttcgtcaaaggattgactaattctttatttgtacgtgcacgatatactttaaccgttcc 36425425  T
Q  519 ttttagagctctctaattattctgtg 544  Q
    ||||||||||||||||||||||||||    
T  36425426 ttttagagctctctaattattctgtg 36425451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 407 - 544
Target Start/End: Complemental strand, 36940611 - 36940474
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatac 506  Q
    ||||||||| |||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  36940611 gcattagtcccatcctgttggatgggtttaggactttctttctagtaattcctttcgtcaaaggattgactaattctttatcaatacgtgcacgatatac 36940512  T
Q  507 tttaaccgttccttttagagctctctaattattctgtg 544  Q
    |||||||||| |||||||||||||||||| ||||||||    
T  36940511 tttaaccgtttcttttagagctctctaatcattctgtg 36940474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 407 - 544
Target Start/End: Original strand, 39520059 - 39520196
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatac 506  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||| |  |||||||||||||||||    
T  39520059 gcattagtctcatcctattggatgtgtttaggactttctttctagtaattcctttcgtcaaaggattgactgattctttcttcgtacgtgcacgatatac 39520158  T
Q  507 tttaaccgttccttttagagctctctaattattctgtg 544  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  39520159 tttaaccgttccttttagagctctctaatcattctgtg 39520196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 261 - 406
Target Start/End: Complemental strand, 12102946 - 12102801
Alignment:
Q  261 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccg 360  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||| || |||||||||||||||  ||| |||||||||| |||    
T  12102946 accgaagttgttactaggttgagtcacgactaggtcgctctctttaagactttttgtggcactggccaaaattgtgcaaggaagactatcaaccacaccg 12102847  T
Q  361 cctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
     | ||||||||||||||| |||||||||||||| || |||||||||    
T  12102846 tcaccaggataaaacaagaccaactacaactgtgcggttaactact 12102801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 263 - 409
Target Start/End: Complemental strand, 16116362 - 16116216
Alignment:
Q  263 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcc 362  Q
    |||||||||| ||||||| ||||||||| |||| |||||| |||| |||||||||| || ||||||||||||||||||||| | ||||||||||||| ||    
T  16116362 cgaagttgttgctaggttaagtcacgactaggttgctctccttaaaacgtttcgtgacactgcccaaaattgtgcaagacaaactatcaaccacgccacc 16116263  T
Q  363 tccaggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    |||  |||||||||||  |||||||||| || |  ||||||||||||    
T  16116262 tcctagataaaacaagttcaactacaacagtactgttaactactgca 16116216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 264 - 372
Target Start/End: Complemental strand, 15414993 - 15414885
Alignment:
Q  264 gaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcct 363  Q
    |||||||||||| |||||||||||||| ||  ||||||||||||| ||||| |||||| ||||||||||||||  || |||| |||||||||||||||||    
T  15414993 gaagttgttacttggttgagtcacgactagaacgctctctttaagtcgttttgtggcactgcccaaaattgtgtgaggcagaatatcaaccacgccgcct 15414894  T
Q  364 ccaggataa 372  Q
    |||||||||    
T  15414893 ccaggataa 15414885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 207 - 289
Target Start/End: Complemental strand, 37550170 - 37550089
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacga 289  Q
    |||||||||||||||| ||||  |||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||    
T  37550170 tgttgtttttggattttcaaattgttgtatttggatttccaaattctattatctaccgaagttg-tattaggttgagtcacga 37550089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 346 - 407
Target Start/End: Original strand, 4871987 - 4872048
Alignment:
Q  346 ttatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactg 407  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  4871987 ttatcaaccacgccgcctccatgataaaacaagctcaactacaactgttcgattaactactg 4872048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 13582785 - 13582690
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    ||||||||||||||||||||||||||||||||||||| |||| | ||| || |||||||||  ||| || ||||||||||| |||||||||||||||    
T  13582785 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccc-aatttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 13582690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 24435964 - 24435869
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  || || |||||||||  ||| |||||||||||||| |||||||||||||||    
T  24435964 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactatcc-aagttgtgcaaggtagactatcaaccacgccgtctccaggataaaaca 24435869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 277 - 376
Target Start/End: Original strand, 7805068 - 7805166
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| ||||||||||||||||||| |||| | ||| || |||||||||  ||| || ||||||||||| |||||||||||||||    
T  7805068 ggttgagtcacgaccaggtccctctctttaagacgtttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 7805166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 277 - 376
Target Start/End: Original strand, 14374132 - 14374230
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||||||||||||||||||||||| |||| | ||| || ||||||| |  ||| || ||||||||||| |||||||||||||||    
T  14374132 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccc-aagttgtgcagggtagactaacaaccacgccgtctccaggataaaaca 14374230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 36253826 - 36253921
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| |||||||||||||||||||||    
T  36253826 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgcctccaggataaaaca 36253921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 256 - 409
Target Start/End: Original strand, 9911128 - 9911280
Alignment:
Q  256 tatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaacca 355  Q
    |||| |||||||||||||||||||||||| | ||| | |||| ||| |||||||| ||| |||||| ||  |||||||||||  | |||| || ||| ||    
T  9911128 tatctaccgaagttgttactaggttgagttaggacaatgtcgttctttttaagacattttgtggcactgttcaaaattgtgcggggcagactaccaatca 9911227  T
Q  356 cgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    ||||| ||| | |||||||||||  ||||||||| ||| || |||| |||||||    
T  9911228 cgccg-ctctaagataaaacaagttcaactacaattgtgcggttaattactgca 9911280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 326 - 379
Target Start/End: Complemental strand, 37550082 - 37550029
Alignment:
Q  326 ccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagc 379  Q
    ||||||||||||||| |||| ||||||||||||| |||||||||||||||||||    
T  37550082 ccaaaattgtgcaaggcagactatcaaccacgccacctccaggataaaacaagc 37550029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 17510058 - 17510153
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  17510058 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 17510153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 276 - 409
Target Start/End: Complemental strand, 13301585 - 13301454
Alignment:
Q  276 aggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaac 375  Q
    |||||||||||||||||||||||| ||||||||||   ||  |||| | ||||||||||||||||  ||| || |||||  |  ||||||||||||||||    
T  13301585 aggttgagtcacgaccaggtcgctttctttaagacaaatcacggcactacccaaaattgtgcaaggtagactaacaaccgtg-tgcctccaggataaaac 13301487  T
Q  376 aagcccaactacaactgttcgattaactactgca 409  Q
     ||||| | | || |||||||||||| |||||||    
T  13301486 -agccccagttcacctgttcgattaaatactgca 13301454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 292 - 393
Target Start/End: Complemental strand, 18265588 - 18265489
Alignment:
Q  292 aggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaact 391  Q
    ||||||||||||||||||||||| ||| || |||| ||||||||||||  |||| ||||||||||| || | ||| |||||||| ||| || ||||||||    
T  18265588 aggtcgctctctttaagacgttttgtgacactgcctaaaattgtgcaa-tcagactatcaaccacgacgtccccatgataaaac-agctcagctacaact 18265491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 280 - 377
Target Start/End: Complemental strand, 24771452 - 24771356
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaa 377  Q
    |||||||||||||||||||| ||||||||| |||||| |||| |  || || |||||||||  ||| || ||||| ||||| ||||||||||||||||    
T  24771452 tgagtcacgaccaggtcgctttctttaagatgtttcgcggcact-acctaagttgtgcaaggtagactaacaaccgcgccgtctccaggataaaacaa 24771356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 12104249 - 12104205
Alignment:
Q  209 ttgtttttggatttccaaacagttgtatttggatttccaaattct 253  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||    
T  12104249 ttgtttttgtatttccaaacagttgtatttggattttcaaattct 12104205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 42019573 - 42019668
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || |||||  |||| |||||||||||||||    
T  42019573 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgtgccgtctccaggataaaaca 42019668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 271 - 377
Target Start/End: Complemental strand, 1414155 - 1414050
Alignment:
Q  271 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggat 370  Q
    ||||| || |||||||||| ||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| ||||| |||    
T  1414155 ttactggggtgagtcacgatcaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaagat 1414057  T
Q  371 aaaacaa 377  Q
    |||||||    
T  1414056 aaaacaa 1414050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 280 - 321
Target Start/End: Original strand, 26709102 - 26709143
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggca 321  Q
    |||||||||||||||||||| |||||||||||||||| ||||    
T  26709102 tgagtcacgaccaggtcgctttctttaagacgtttcgcggca 26709143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 280 - 321
Target Start/End: Original strand, 26978836 - 26978877
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggca 321  Q
    |||||||||||||||||||| |||||||||||||||| ||||    
T  26978836 tgagtcacgaccaggtcgctttctttaagacgtttcgcggca 26978877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 17504953 - 17505048
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||| | |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| || || |||||||||||||||    
T  17504953 tgagtcacgaccaggtcgttttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgtcgtctccaggataaaaca 17505048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 316
Target Start/End: Original strand, 41853548 - 41853584
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcg 316  Q
    |||||||||||||||||||| ||||||||||||||||    
T  41853548 tgagtcacgaccaggtcgctttctttaagacgtttcg 41853584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 271 - 321
Target Start/End: Complemental strand, 24776919 - 24776869
Alignment:
Q  271 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggca 321  Q
    ||||| || ||||||||||||| |||||| |||||||||||||||| ||||    
T  24776919 ttactggggtgagtcacgaccatgtcgctttctttaagacgtttcgcggca 24776869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 377
Target Start/End: Complemental strand, 1286344 - 1286265
Alignment:
Q  296 cgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaa 377  Q
    ||||||||||||||| ||| |||||| |||| ||||||||||||   ||||||| ||||||| || ||||| ||||||||||    
T  1286344 cgctctctttaagacattt-gtggcattgccgaaaattgtgcaa-ctagattattaaccacgacgtctccatgataaaacaa 1286265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 256
Target Start/End: Original strand, 9496714 - 9496759
Alignment:
Q  211 gtttttggatttccaaacagttgtatttggatttccaaattctatt 256  Q
    |||||||||||||||||| ||| |||||| |||| |||||||||||    
T  9496714 gtttttggatttccaaaccgttatatttgaattttcaaattctatt 9496759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 310
Target Start/End: Original strand, 31731540 - 31731573
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagac 310  Q
    ||||||||||||||||||||||| ||||||||||    
T  31731540 ggttgagtcacgaccaggtcgctttctttaagac 31731573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 177; Significance: 4e-95; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 205 - 409
Target Start/End: Original strand, 3998 - 4202
Alignment:
Q  205 tctgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 304  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3998 tctgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 4097  T
Q  305 taagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaacta 404  Q
    |||||| |||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  4098 taagacatttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgttcgattaacta 4197  T
Q  405 ctgca 409  Q
    |||||    
T  4198 ctgca 4202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 207 - 404
Target Start/End: Complemental strand, 444101 - 443917
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    ||||||||||||||||  ||||  ||||||||| |||| |||||||||||||  |||||||||||||||||||||| ||||||| | ||||             
T  444101 tgttgtttttggatttttaaactcttgtatttgtattttcaaattctattatttaccgaagttgttactaggttgaatcacgacgaagtcg--------- 444011  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaacta 404  Q
      ||||||||||||| |||| ||||||||||||| |||| |||||||||||||| ||| ||||||||||||||||| |||||||||| || |||||||    
T  444010 --acgtttcgtggcactgcc-aaaattgtgcaaggcagactatcaaccacgccgtctc-aggataaaacaagcccagctacaactgtgcggttaacta 443917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 176; Significance: 1e-94; HSPs: 78)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 202 - 409
Target Start/End: Original strand, 3672505 - 3672712
Alignment:
Q  202 agttctgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctct 301  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3672505 agttttgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctct 3672604  T
Q  302 ctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaa 401  Q
    |||||||||||||| ||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3672605 ctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgttcgattaa 3672704  T
Q  402 ctactgca 409  Q
    ||||||||    
T  3672705 ctactgca 3672712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 175; E-Value: 6e-94
Query Start/End: Original strand, 207 - 409
Target Start/End: Original strand, 3692542 - 3692744
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  3692542 tgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 3692641  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||| ||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  3692642 agacgtttcatggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgttcgattaactact 3692741  T
Q  407 gca 409  Q
    |||    
T  3692742 gca 3692744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 173; E-Value: 9e-93
Query Start/End: Original strand, 205 - 409
Target Start/End: Complemental strand, 39775899 - 39775695
Alignment:
Q  205 tctgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 304  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  39775899 tctgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgctactaggttgagtcacgaccaggtcgctctctt 39775800  T
Q  305 taagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaacta 404  Q
    ||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  39775799 taagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagctcagctacaactgttcgattaacta 39775700  T
Q  405 ctgca 409  Q
    |||||    
T  39775699 ctgca 39775695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 7571387 - 7571185
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  7571387 tgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 7571288  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| || |||||||||| || |||||||||    
T  7571287 agacgtttcgtggcactgcccaaaattgtgcaagacagactatcaatcacgccgcctccaggataaaacaagctcagctacaactgtgcggttaactact 7571188  T
Q  407 gca 409  Q
    |||    
T  7571187 gca 7571185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 207 - 409
Target Start/End: Original strand, 18467149 - 18467351
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    ||||||||||| |||||||||| | ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18467149 tgttgtttttgaatttccaaactgatgtatttggattttcaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 18467248  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| |||||||||||||||||| |||| ||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  18467249 agacgtttcgtggcactgcccaaaattgtgcaaggcagactattaaccacgccgcctccaggataaaacaagtccaactacaattgttcgattaactact 18467348  T
Q  407 gca 409  Q
    |||    
T  18467349 gca 18467351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 23666292 - 23666090
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  23666292 tgttgtttttgaatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 23666193  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| || ||||||| || ||||||| |    
T  23666192 agacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaactaat 23666093  T
Q  407 gca 409  Q
    |||    
T  23666092 gca 23666090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 24038540 - 24038338
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  24038540 tgttgtttttgaatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 24038441  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| || ||||||| || ||||||| |    
T  24038440 agacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaactaat 24038341  T
Q  407 gca 409  Q
    |||    
T  24038340 gca 24038338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 207 - 409
Target Start/End: Original strand, 8069603 - 8069805
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctatt-atccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 305  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  8069603 tgttgtttttggatttccaaacagttgtatttggatttccaaattctatttatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 8069702  T
Q  306 aagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactac 405  Q
    |||||||||||||||| || || ||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||| || ||||||||    
T  8069703 aagacgtttcgtggcactgtcc-aaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaactac 8069801  T
Q  406 tgca 409  Q
    ||||    
T  8069802 tgca 8069805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 207 - 409
Target Start/End: Original strand, 8883094 - 8883296
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    ||||| |||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  8883094 tgttgattttggatttccaaactgttgtatttggattttcaaattctattatctaccgaagttgttactaggtcgagtcacgaccaggtcgctctcttta 8883193  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| || ||||||| || |||||||||    
T  8883194 agacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgctgcctccaggataaaacaagcccagctgcaactgtgcggttaactact 8883293  T
Q  407 gca 409  Q
    |||    
T  8883294 gca 8883296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 212 - 409
Target Start/End: Complemental strand, 758532 - 758335
Alignment:
Q  212 tttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 311  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  758532 tttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccagatcgctctctttaagacg 758433  T
Q  312 tttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    |||||||||| | |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| || ||||||| || ||||||||||||    
T  758432 tttcgtggcactacccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaactactgca 758335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 212 - 409
Target Start/End: Original strand, 3033573 - 3033770
Alignment:
Q  212 tttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 311  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3033573 tttttggatttccaaactgtagtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 3033672  T
Q  312 tttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    |||| ||||| |||||||||||||||||| |||| |||||||||| ||||||| |||||||||||||| || ||||||||||||||||||||||||||    
T  3033673 tttcatggcactgcccaaaattgtgcaaggcagactatcaaccacaccgcctcaaggataaaacaagctcagctacaactgttcgattaactactgca 3033770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 207 - 411
Target Start/End: Original strand, 18471932 - 18472135
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    ||||||||||| ||||| |||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18471932 tgttgtttttgaatttctaaactgatgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 18472031  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
     || | ||||||||| |||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18472032 cgatg-ttcgtggcactgcctaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgttcgattaactact 18472130  T
Q  407 gcatt 411  Q
    |||||    
T  18472131 gcatt 18472135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 14438864 - 14438662
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    ||||||||||||||| |||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  14438864 tgttgtttttggattcccaaactgttgtatttggatttccaagttctattatctaccgaagttgttactaggttgagtcacgaccaggtcgccctcttta 14438765  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| | |||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||| || ||||||| || |||||||||    
T  14438764 agacgtttcgtggcactacccaaaattgtgcaaggcagacaatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaactact 14438665  T
Q  407 gca 409  Q
    |||    
T  14438664 gca 14438662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 207 - 410
Target Start/End: Original strand, 3418918 - 3419122
Alignment:
Q  207 tgttgtttttgg-atttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 305  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  3418918 tgttgtttttggtatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaagtcgctctcttt 3419017  T
Q  306 aagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactac 405  Q
    |||||||||||||||| |||||||||||||||||| |||| ||||||||||||| ||| ||||||||||||||| ||||| ||||||| || |||||||     
T  3419018 aagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccaccttcaggataaaacaagctcaactgcaactgtgcggttaactat 3419117  T
Q  406 tgcat 410  Q
    |||||    
T  3419118 tgcat 3419122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 207 - 406
Target Start/End: Original strand, 8887854 - 8888053
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8887854 tgttgattttggatttccaaactgttgtatttgaatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 8887953  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    |||||||| || ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| || ||||||| || |||||||||    
T  8887954 agacgttttgttgcactgtccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaaatccagctgcaactgtgcggttaactact 8888053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 206 - 393
Target Start/End: Original strand, 29350163 - 29350350
Alignment:
Q  206 ctgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 305  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||    
T  29350163 ctgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccatgtcgctttcttt 29350262  T
Q  306 aagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgt 393  Q
    |||||||||||||||| |||||||||||||||||| ||||  ||| |||| ||||||||||||||||||||||| |||||||||||||    
T  29350263 aagacgtttcgtggcactgcccaaaattgtgcaaggcagaccatctaccatgccgcctccaggataaaacaagctcaactacaactgt 29350350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 209 - 409
Target Start/End: Complemental strand, 12966040 - 12965840
Alignment:
Q  209 ttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaag 308  Q
    ||||||||| |||| ||||| ||||||||||| |||||||||||||| ||| ||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  12966040 ttgtttttgaattttcaaaccgttgtatttgggtttccaaattctatgatctaccgaagttgttactagattgagtcacaaccaggtcgctctctttaag 12965941  T
Q  309 acgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgc 408  Q
    ||||||  ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||    
T  12965940 acgttttatggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaagtccaactacaattgttcgattaactaatgc 12965841  T
Q  409 a 409  Q
    |    
T  12965840 a 12965840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 230 - 409
Target Start/End: Complemental strand, 32474824 - 32474647
Alignment:
Q  230 gttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaa 329  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||  |||||||||||||||| |||||||    
T  32474824 gttgtttttggatttccaaattctattatctaccgaagttgttactagattgagccacgaccaggtcgctctct--aagacgtttcgtggcactgcccaa 32474727  T
Q  330 aattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  32474726 aattgtgcaagacagactatcaaccacgccgtctccaggataaaacaagcccagctacaactgttcgattaactactgca 32474647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 210 - 409
Target Start/End: Original strand, 55431242 - 55431441
Alignment:
Q  210 tgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaaga 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||| ||||||||||||||| |||||||||||||||||||    
T  55431242 tgtttttggatttccaaacagttgtatttggatttccaaattctattatctgctgaagttgttattaggttgagtcacgatcaggtcgctctctttaaga 55431341  T
Q  310 cgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    ||||||||| || || | |||||| |||||| |||| |||||||||||||||||||||||||||||||| ||| |||||||||| || ||||||||||||    
T  55431342 cgtttcgtgacactgtcaaaaattatgcaaggcagactatcaaccacgccgcctccaggataaaacaagtccagctacaactgtgcggttaactactgca 55431441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 207 - 407
Target Start/End: Original strand, 20519978 - 20520178
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    ||||||||| | |||| ||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||    
T  20519978 tgttgttttcgaattttcaaactgttgtatttggatttccaaattctattatctagcgaagttgttactaggttgagtcacgaccaggtcactctcttta 20520077  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| ||||||| ||||||||||  ||| |||||||||||||||||||| ||||||||||| ||| |||||||||| || |||||||||    
T  20520078 agacgtttcgtggcactgcccaagattgtgcaagggagactatcaaccacgccgcctccaagataaaacaagtccagctacaactgtgcggttaactact 20520177  T
Q  407 g 407  Q
    |    
T  20520178 g 20520178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 203 - 406
Target Start/End: Complemental strand, 49971597 - 49971394
Alignment:
Q  203 gttctgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctc 302  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  49971597 gttctcttgtttttggatttccaaactgttgtatttggatttccaagttttattatctaccgaagttgttactaggttgagtcacgaccaggtcgatctc 49971498  T
Q  303 tttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaac 402  Q
    ||||||||||||||||||| |  ||||||||||||||| |||| |||||| ||||||||||||||||||||||||| ||| || ||||||| |  |||||    
T  49971497 tttaagacgtttcgtggcactatccaaaattgtgcaaggcagactatcaatcacgccgcctccaggataaaacaagtccagctgcaactgtgcagttaac 49971398  T
Q  403 tact 406  Q
    ||||    
T  49971397 tact 49971394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 263 - 411
Target Start/End: Complemental strand, 12971746 - 12971598
Alignment:
Q  263 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcc 362  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  12971746 cgaagttgttactaggttgactcacgaccaggtctctctctttaagacgtttcgtggcattgcccaaaattgtgcaagacagattatcaatcacgccgcc 12971647  T
Q  363 tccaggataaaacaagcccaactacaactgttcgattaactactgcatt 411  Q
    || |||||||||||||||||||||||||||||| |||||||||||||||    
T  12971646 tctaggataaaacaagcccaactacaactgttcaattaactactgcatt 12971598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 3657409 - 3657207
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||| ||||||||| ||||| |||||||||| ||||| ||||||||||||| |||||||||||||||| ||||||||||||  || ||||||||||||    
T  3657409 tgttgtgtttggattttcaaactgttgtatttgaatttctaaattctattatctaccgaagttgttactatgttgagtcacgattagatcgctctcttta 3657310  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| ||  ||||||||||||||||||| ||||||||| ||| |||||| ||||||||||| ||| ||||||||||| |||||||||||    
T  3657309 agacgtttcgtggcactgttcaaaattgtgcaagacagactatcaaccatgccacctccaagataaaacaagtccagctacaactgttagattaactact 3657210  T
Q  407 gca 409  Q
    |||    
T  3657209 gca 3657207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 407 - 544
Target Start/End: Original strand, 8884917 - 8885054
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatac 506  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  8884917 gcattagtcccatcctattggatgtgtttaggactttctttctagtaattcctttcgtcaaaggattgactaattctttatcagtacgtgcacgatatac 8885016  T
Q  507 tttaaccgttccttttagagctctctaattattctgtg 544  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  8885017 tttaaccgttccttttagagctctctaatcattctgtg 8885054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 209 - 409
Target Start/End: Original strand, 29715570 - 29715770
Alignment:
Q  209 ttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaag 308  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||| ||||||    
T  29715570 ttgtttttggatttccaaactgttgtatttagatttccaaattctattatctaccgaagttgttattaggttgagtcacgaccagatcgctctttttaag 29715669  T
Q  309 acgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgc 408  Q
    |||||||||| || || |||||||||||| ||  ||| |||||||||||||||||| ||||||||||||| ||| ||||| |||| || ||||||| |||    
T  29715670 acgtttcgtgacactgtccaaaattgtgctaggaagactatcaaccacgccgcctctaggataaaacaagtccagctacagctgtgcggttaactattgc 29715769  T
Q  409 a 409  Q
    |    
T  29715770 a 29715770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 23661619 - 23661431
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||            
T  23661619 tgttgtttttgaatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgc-------- 23661528  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
          ||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| || ||||||| || ||||||| |    
T  23661527 ------ttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaactaat 23661434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 407 - 544
Target Start/End: Original strand, 18468886 - 18469023
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatac 506  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||    
T  18468886 gcattagtcccatcctattggatgtgtttaggactttctttctagtaattcctttcatcaaaggattgattaattctttatcagtacgtgcacaatatac 18468985  T
Q  507 tttaaccgttccttttagagctctctaattattctgtg 544  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  18468986 tttaaccgttccttttagagctctttaatcattctgtg 18469023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 407 - 544
Target Start/End: Complemental strand, 23664543 - 23664406
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatac 506  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||    
T  23664543 gcattagtcccatcctattggatgtgtttaggactttctttctagtaattcctttcgtcaaaggattgactaatgctttattagtacgtgcacgatatac 23664444  T
Q  507 tttaaccgttccttttagagctctctaattattctgtg 544  Q
    ||||||| ||||||||||||||||||||| ||||||||    
T  23664443 tttaaccattccttttagagctctctaatcattctgtg 23664406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 407 - 544
Target Start/End: Original strand, 3674313 - 3674451
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattc-tttatcagtacgtgcacgatata 505  Q
    ||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||    
T  3674313 gcattagtcccatcctgttggatgtgtttaggactttctttctagtaattcctttcgtcaaaggattgactaattcttttatcaatacgtgcacgatata 3674412  T
Q  506 ctttaaccgttccttttagagctctctaattattctgtg 544  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  3674413 ctttaaccgttccttttagagctctctaatcattctgtg 3674451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 207 - 389
Target Start/End: Complemental strand, 12112822 - 12112628
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctatt------------atccaccgaagttgttactaggttgagtcacgaccagg 294  Q
    |||||||||| ||||| ||||| ||||||||||||||| |||||||||||            ||| |||||||||||||||||||||| ||||||| |||    
T  12112822 tgttgttttttgatttacaaaccgttgtatttggattttcaaattctattttaaaaaggaatatctaccgaagttgttactaggttgaatcacgactagg 12112723  T
Q  295 tcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaa 389  Q
    ||||||||||||||||||||||||||| || ||||| |||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||    
T  12112722 tcgctctctttaagacgtttcgtggcactgtccaaagttgtgcaagacagactatcaaccacaccgcctccaggataaaacaagctcaactacaa 12112628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 206 - 333
Target Start/End: Original strand, 27708802 - 27708928
Alignment:
Q  206 ctgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 305  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||    
T  27708802 ctgttgtttttg-atttccaaactgttgtatttggatttccaaattctattatataccgaagttgttactaggttgagtcacgaccaggtcgttctcttt 27708900  T
Q  306 aagacgtttcgtggcaatgcccaaaatt 333  Q
    |||||||||||||||| |||||||||||    
T  27708901 aagacgtttcgtggcactgcccaaaatt 27708928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 407 - 522
Target Start/End: Complemental strand, 12970231 - 12970116
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatac 506  Q
    ||||||||| ||||||||||||| ||||||  |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| || | | | |    
T  12970231 gcattagtcccatcctattggatatgtttagtactttctttccagtaattcctttcgtcaaaggattgactaattctttatcagtacgtacatgctctgc 12970132  T
Q  507 tttaaccgttcctttt 522  Q
    ||||||| ||||||||    
T  12970131 tttaaccattcctttt 12970116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 306 - 409
Target Start/End: Original strand, 27708959 - 27709062
Alignment:
Q  306 aagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactac 405  Q
    |||||||||| ||||| ||||||||||| ||||||  ||| |||||||||||||||||||||||||||||||||||| || ||||||| || ||||||||    
T  27708959 aagacgtttcatggcactgcccaaaattatgcaaggtagactatcaaccacgccgcctccaggataaaacaagcccagcttcaactgtgcggttaactac 27709058  T
Q  406 tgca 409  Q
    ||||    
T  27709059 tgca 27709062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 263 - 407
Target Start/End: Original strand, 28125097 - 28125242
Alignment:
Q  263 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcc 362  Q
    |||| |||||||||||||||||||||||||||| ||||| |||||||| |||||||||| |||  |||||||||||||||||| ||| |||||| | |||    
T  28125097 cgaaattgttactaggttgagtcacgaccaggttgctct-tttaagacatttcgtggcactgcttaaaattgtgcaagacagactattaaccacactgcc 28125195  T
Q  363 tccaggat--aaaacaagcccaactacaactgttcgattaactactg 407  Q
    ||||||||  ||||||||  ||||||||| ||| || | ||||||||    
T  28125196 tccaggattaaaaacaagttcaactacaattgtgcggtcaactactg 28125242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 2207876 - 2207762
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    ||||||||||||||||  |||| |||||||||| ||||  ||||||||||||  | ||||||||| ||||| ||||||||||||||||||||||| ||||    
T  2207876 tgttgtttttggatttttaaactgttgtatttgaatttttaaattctattatttatcgaagttgtcactagattgagtcacgaccaggtcgctcttttta 2207777  T
Q  307 agacgtttcgtggca 321  Q
    |||||||| ||||||    
T  2207776 agacgtttagtggca 2207762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 271 - 376
Target Start/End: Original strand, 26962050 - 26962154
Alignment:
Q  271 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggat 370  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||| | | | || |||||||||  ||| || ||| ||||||| |||||||||    
T  26962050 ttactgggttgagtcacgaccagatcgctctctttaagacgtttcgtggcactacac-aagttgtgcaaggtagactaacaaacacgccgtctccaggat 26962148  T
Q  371 aaaaca 376  Q
    ||||||    
T  26962149 aaaaca 26962154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 277 - 376
Target Start/End: Original strand, 13022024 - 13022122
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    ||||||||||||||||||||||||| ||||| |||||||| |||| | ||| || |||||||||  ||| || ||||||||||| |||||||||||||||    
T  13022024 ggttgagtcacgaccaggtcgctctttttaaaacgtttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 13022122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 264 - 409
Target Start/End: Original strand, 20507637 - 20507779
Alignment:
Q  264 gaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcct 363  Q
    |||||| ||||| |||| || || | ||||||| |||||||||   ||||| |||||| ||| |||||||||||||| |||| |||||||||| || |||    
T  20507637 gaagttattacttggtttaggcatggccaggtcactctcttta---cgtttggtggcactgctcaaaattgtgcaaggcagactatcaaccacaccacct 20507733  T
Q  364 ccaggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    | ||||||||||||| ||||| | |  ||| |||||||||||||||    
T  20507734 ctaggataaaacaagaccaacaatagttgtgcgattaactactgca 20507779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 272 - 339
Target Start/End: Complemental strand, 25726897 - 25726830
Alignment:
Q  272 tactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaa 339  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||| | |||| ||||||||||    
T  25726897 tactagattgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccagaattgtgcaa 25726830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 277 - 376
Target Start/End: Complemental strand, 33089441 - 33089343
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||||||||||||||||||||||| |||| | |||  | |||||||||  ||| || ||||||||||| ||| |||||||||||    
T  33089441 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccc-tagttgtgcaaggtagactaacaaccacgccgtctctaggataaaaca 33089343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 271 - 393
Target Start/End: Original strand, 48432398 - 48432519
Alignment:
Q  271 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccagga 369  Q
    |||||||| |||||| || || ||||||||||||||||||||||| |||||| |||||||||||||| || ||||| ||||||||||| || | ||| ||    
T  48432398 ttactaggctgagtcgcggactaggtcgctctctttaagacgttttgtggcactgcccaaaattgtg-aaaacagactatcaaccacgacgtccccaaga 48432496  T
Q  370 taaaacaagcccaactacaactgt 393  Q
    |||||| |||| | ||||||||||    
T  48432497 taaaac-agcctagctacaactgt 48432519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 20090757 - 20090662
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  20090757 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 20090662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 20095882 - 20095787
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  20095882 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 20095787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 34129264 - 34129169
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || ||||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  34129264 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 34129169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 277 - 376
Target Start/End: Original strand, 20810369 - 20810467
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    ||||||||||||||||||||| ||||||||||||||||||  ||| | |||  | |||||||||  ||| || ||||||||||| |||||||||||||||    
T  20810369 ggttgagtcacgaccaggtcgttctctttaagacgtttcgcagcactaccc-tagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 20810467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 277 - 376
Target Start/End: Original strand, 53119524 - 53119622
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    ||||||||||||| |||||||||||||||||||||||||| |||| | | | || |||||||||  ||| || ||||||||||| ||| |||||||||||    
T  53119524 ggttgagtcacgatcaggtcgctctctttaagacgtttcgcggcactactc-aagttgtgcaaggtagactaacaaccacgccgtctctaggataaaaca 53119622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 271 - 376
Target Start/End: Complemental strand, 48435933 - 48435828
Alignment:
Q  271 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccagga 369  Q
    |||||||| |||||| || || ||||||||||||||||||||||||||| || ||  |||||| ||||||| |||| ||||||||||| || | ||||||    
T  48435933 ttactaggctgagtcgcggactaggtcgctctctttaagacgtttcgtgacactgttcaaaatagtgcaag-cagactatcaaccacgacgtccccagga 48435835  T
Q  370 taaaaca 376  Q
    |||||||    
T  48435834 taaaaca 48435828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 271 - 376
Target Start/End: Complemental strand, 15768295 - 15768191
Alignment:
Q  271 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggat 370  Q
    ||||| || ||||||||||||||||||||||||||||||||||||| |||| |  ||  || ||||||||  ||| || ||||| ||||| |||||||||    
T  15768295 ttactgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcact-acctgaactgtgcaaggtagactagcaaccgcgccgtctccaggat 15768197  T
Q  371 aaaaca 376  Q
    ||||||    
T  15768196 aaaaca 15768191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 17364063 - 17364160
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaat-tgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| |||||||||||||||| |||| | || ||| | ||||||||  ||| || ||||| ||||| |||||||||||||||    
T  17364063 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaaattgtgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 17364160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 3477041 - 3476946
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  3477041 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 3476946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 292 - 376
Target Start/End: Original strand, 4662196 - 4662279
Alignment:
Q  292 aggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||| |||||||||| |||| ||||||||||||| |||||| |||| ||||||||| | || | |||||||||||||    
T  4662196 aggtcgctctctctaagacgtttagtggaaatgcccaaaattatgcaag-cagactatcaaccatgacgtccccaggataaaaca 4662279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 15763125 - 15763030
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  ||  || ||||||||  ||| || ||||| ||||| |||||||||||||||    
T  15763125 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact-acctgaactgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 15763030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 298 - 389
Target Start/End: Original strand, 16013724 - 16013816
Alignment:
Q  298 ctctctttaagacgtttcgtggcaat-gcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaa 389  Q
    ||||||||||||||||||||| || |  |  |||||||||||||| ||| |||| ||||||||||||||||||||||| |||| || ||||||    
T  16013724 ctctctttaagacgtttcgtgacactatctaaaaattgtgcaagatagactatccaccacgccgcctccaggataaaataagctcatctacaa 16013816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 17368719 - 17368814
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  17368719 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 17368814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 277 - 376
Target Start/End: Complemental strand, 2617355 - 2617256
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    ||||||||||| |||| |||||| |||||||||||||||| |||| | | | |  |||||||||  ||| || ||||| |||||||||||||||||||||    
T  2617355 ggttgagtcacaaccatgtcgctttctttaagacgtttcgcggcactactcgagtttgtgcaaggtagactaacaaccgcgccgcctccaggataaaaca 2617256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 277 - 376
Target Start/End: Complemental strand, 38437089 - 38436991
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    ||||||||||||| |||||| || ||||||||||||||||||||| |  || || ||||| |||  ||| || ||||||||||| |||||||||||||||    
T  38437089 ggttgagtcacgatcaggtcactttctttaagacgtttcgtggcactatcc-aagttgtgaaaggtagactaacaaccacgccgtctccaggataaaaca 38436991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 207 - 256
Target Start/End: Original strand, 16013644 - 16013693
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctatt 256  Q
    ||||| |||||||||||||||| |||||||||||||||||||| ||||||    
T  16013644 tgttggttttggatttccaaactgttgtatttggatttccaaagtctatt 16013693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 292 - 393
Target Start/End: Original strand, 16983006 - 16983105
Alignment:
Q  292 aggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaact 391  Q
    |||||||||| ||||||||||||| || || || ||||||||||| |||| ||| |||||||||||  | | |||||||||||||| |||| ||||||||    
T  16983006 aggtcgctctttttaagacgtttcatgacactgtccaaaattgtgaaaga-agaatatcaaccacgatgtccccaggataaaacaa-cccagctacaact 16983103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 17357836 - 17357933
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaat-tgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||| | |||||||||||||||| |||| | || ||| | ||||||||  ||| || ||||| ||||| |||||||||||||||    
T  17357836 tgagtcacgaccaggtcgatttctttaagacgtttcgcggcactacctaaattgtgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 17357933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 271 - 376
Target Start/End: Complemental strand, 27605240 - 27605135
Alignment:
Q  271 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggat 370  Q
    |||| ||||||||||||||||| ||||||||||||||||| |||||  ||| | ||| |  |||||||||  ||| || |||| || ||||||| |||||    
T  27605240 ttaccaggttgagtcacgaccaagtcgctctctttaagacatttcgcagcactacccgagtttgtgcaaggtagactaacaactacaccgcctctaggat 27605141  T
Q  371 aaaaca 376  Q
    ||||||    
T  27605140 aaaaca 27605135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 3482518 - 3482423
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| |||||||||| ||||| ||| ||  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  3482518 tgagtcacgaccaggtcgctttctttaagacttttcgcggc-attacctaatttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 3482423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 347 - 411
Target Start/End: Complemental strand, 6596386 - 6596322
Alignment:
Q  347 tatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgcatt 411  Q
    ||||||||||||||||||||||||||||||||| || |||||| | |  | ||||||||||||||    
T  6596386 tatcaaccacgccgcctccaggataaaacaagctcagctacaattatgtggttaactactgcatt 6596322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 409
Target Start/End: Complemental strand, 19277031 - 19276887
Alignment:
Q  265 aagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctc 364  Q
    ||||||||| || ||||||| || |  ||||  |||| |||||||| ||| |||||| || | ||||||||| |||||||| |||||||||||  |||||    
T  19277031 aagttgttattaagttgagttacaataaggtttctctttttaagactttttgtggcactgtcgaaaattgtgtaagacagactatcaaccacgttgcctc 19276932  T
Q  365 caggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
     || ||||||||||| ||| || |||| | || ||| ||||||||    
T  19276931 tagaataaaacaagctcaattaaaactatgcggttagctactgca 19276887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 54270644 - 54270739
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| |||||||||| ||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  54270644 tgagtcacgaccaggtcgctttctttaagacatttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 54270739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 404
Target Start/End: Original strand, 55325847 - 55325897
Alignment:
Q  354 cacgccgcctccaggataaaacaagcccaactacaactgttcgattaacta 404  Q
    |||||||||||||||||||||||||||||  ||||||||| || |||||||    
T  55325847 cacgccgcctccaggataaaacaagcccagttacaactgtgcggttaacta 55325897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 279 - 376
Target Start/End: Complemental strand, 21494399 - 21494302
Alignment:
Q  279 ttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    ||||||||||||||||||||||||||||||| || ||  | || | |||||  |||||||||  ||| || ||||| ||||| |||| ||||||||||    
T  21494399 ttgagtcacgaccaggtcgctctctttaagatgtatcacgacagtacccaagtttgtgcaaggtagactaacaaccgcgccgtctccgggataaaaca 21494302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 377
Target Start/End: Complemental strand, 7806656 - 7806553
Alignment:
Q  271 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggat 370  Q
    |||| |||||||||  ||||||||||||||||||||||||| |||  | || | || ||||||||   ||  ||| |||||||||||| ||||| |||||    
T  7806656 ttaccaggttgagttgcgaccaggtcgctctctttaagacgattcacgacactacctaaaattgt---aggtagactatcaaccacgctgcctcgaggat 7806560  T
Q  371 aaaacaa 377  Q
    |||||||    
T  7806559 aaaacaa 7806553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 55128790 - 55128885
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||| | |||||||||||||||| |||| |  || || ||||| |||  ||| || ||||| ||||| |||||||||||||||    
T  55128790 tgagtcacgaccaggtcgttttctttaagacgtttcgcggcact-acctaagttgtgtaaggtagactagcaaccgcgccgtctccaggataaaaca 55128885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 282 - 321
Target Start/End: Original strand, 10321444 - 10321483
Alignment:
Q  282 agtcacgaccaggtcgctctctttaagacgtttcgtggca 321  Q
    |||||||||||||||||| |||||||||||||||| ||||    
T  10321444 agtcacgaccaggtcgctttctttaagacgtttcgcggca 10321483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 378
Target Start/End: Complemental strand, 17026213 - 17026103
Alignment:
Q  268 ttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccag 367  Q
    |||||| |||||| |||||||| ||  ||||||||||||||||||||  || ||  | | ||| |||||||||||||| ||||||| |||  | ||  ||    
T  17026213 ttgttaataggttaagtcacgatcaattcgctctctttaagacgttttctgacaccgtctaaatttgtgcaagacagactatcaacaacgttgtctttag 17026114  T
Q  368 gataaaacaag 378  Q
    |||||||||||    
T  17026113 gataaaacaag 17026103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 299 - 377
Target Start/End: Original strand, 46964031 - 46964109
Alignment:
Q  299 tctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaa 377  Q
    ||||||||||||||||| ||||| ||   ||||||||||||  |||| ||||| ||| ||| |||| ||||||||||||    
T  46964031 tctctttaagacgtttcatggcactgtttaaaattgtgcaatgcagactatcacccatgccacctctaggataaaacaa 46964109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 277 - 315
Target Start/End: Original strand, 53358239 - 53358277
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagacgtttc 315  Q
    |||||||||||| |||||||||| |||||||||||||||    
T  53358239 ggttgagtcacggccaggtcgctttctttaagacgtttc 53358277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 377
Target Start/End: Complemental strand, 1741153 - 1741108
Alignment:
Q  332 ttgtgcaagacagattatcaaccacgccgcctccaggataaaacaa 377  Q
    ||||||||| || |||| ||||| ||||||||||||||||||||||    
T  1741153 ttgtgcaaggcaaattaacaaccgcgccgcctccaggataaaacaa 1741108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 376
Target Start/End: Complemental strand, 4117704 - 4117600
Alignment:
Q  271 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggat 370  Q
    ||||| || |||||||||||||||||||| || ||||||| ||||| |||| |  || || |||||||||  ||| || ||||| ||| | |||||||||    
T  4117704 ttactggggtgagtcacgaccaggtcgctttcgttaagacatttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgctgtctccaggat 4117606  T
Q  371 aaaaca 376  Q
    ||||||    
T  4117605 aaaaca 4117600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 310
Target Start/End: Complemental strand, 10586281 - 10586248
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagac 310  Q
    ||||||||||||||||||||||| ||||||||||    
T  10586281 ggttgagtcacgaccaggtcgctttctttaagac 10586248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 321
Target Start/End: Complemental strand, 30341939 - 30341898
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggca 321  Q
    ||||||||||||||||| || |||||||||||||||| ||||    
T  30341939 tgagtcacgaccaggtcactttctttaagacgtttcgcggca 30341898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 299 - 378
Target Start/End: Complemental strand, 1641149 - 1641069
Alignment:
Q  299 tctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctcca-ggataaaacaag 378  Q
    |||||||||||||||| | | || |||| ||||||||  |||||||| |||||||||| ||| || || ||||||||||||    
T  1641149 tctctttaagacgttttgcgacactgccaaaaattgtaaaagacagactatcaaccaccccgtcttcagggataaaacaag 1641069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 282 - 314
Target Start/End: Complemental strand, 1688980 - 1688948
Alignment:
Q  282 agtcacgaccaggtcgctctctttaagacgttt 314  Q
    |||||||||||||||||| ||||||||||||||    
T  1688980 agtcacgaccaggtcgctttctttaagacgttt 1688948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 171; Significance: 1e-91; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 207 - 409
Target Start/End: Original strand, 30650855 - 30651057
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  30650855 tgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccagatcgctctcttta 30650954  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  30650955 agacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaagataaaacaagcccagctacaactgttcgattaactact 30651054  T
Q  407 gca 409  Q
    |||    
T  30651055 gca 30651057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 9189972 - 9189770
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  9189972 tgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggttgctctcttta 9189873  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| || ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  9189872 agacgtttcgtggcactgtccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgtttgattaactact 9189773  T
Q  407 gca 409  Q
    |||    
T  9189772 gca 9189770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 19892635 - 19892433
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  19892635 tgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 19892536  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||| ||||| || |||||||||||||| ||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  19892535 agacgtttcctggcactgtccaaaattgtgcaacacagactatcaaccacgccgcctccaggataaaacaagctcagctacaactgttcgattaactact 19892436  T
Q  407 gca 409  Q
    |||    
T  19892435 gca 19892433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 9180893 - 9180691
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    ||||||||||| |||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  9180893 tgttgtttttgaatttccaaactgttgtatttggattttcaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 9180794  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| || ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  9180793 agacgtttcgtggcactgtccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgtttgattaactact 9180694  T
Q  407 gca 409  Q
    |||    
T  9180693 gca 9180691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 207 - 409
Target Start/End: Original strand, 18344357 - 18344559
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  18344357 tgttgtttttggatttccaaactgttgtatttggattttcaaattctattatcaaccgaagttgttactagattgagtcacgaccaggtcgctctcttta 18344456  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| |||||||||||||||||| |||| ||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  18344457 agacgtttcgtggcactgcccaaaattgtgcaaggcagactattaaccacgccggctccaggataaaacaagcccagctacaactgttcgattaactact 18344556  T
Q  407 gca 409  Q
    |||    
T  18344557 gca 18344559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 206 - 409
Target Start/End: Complemental strand, 1935163 - 1934960
Alignment:
Q  206 ctgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 305  Q
    |||||||||||| |||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1935163 ctgttgtttttgaattttcaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 1935064  T
Q  306 aagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactac 405  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||| || |||||||     
T  1935063 aagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaactaa 1934964  T
Q  406 tgca 409  Q
    ||||    
T  1934963 tgca 1934960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 7738020 - 7737818
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    ||||| ||||||||||| | || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  7738020 tgttgattttggatttctatactgttgtatttggattttcaaattctattatccaccgaagttgttactaggttgagtcacgaccatgtcgctctcttta 7737921  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||| |||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  7737920 agaagttttgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaagcccaactacaattgttcgattaactatt 7737821  T
Q  407 gca 409  Q
    |||    
T  7737820 gca 7737818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 207 - 409
Target Start/End: Original strand, 31326665 - 31326867
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||||||||||||||  |||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  31326665 tgttgtttttggatttccaaaatgttgtaattgaatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 31326764  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||| || || |||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  31326765 agacgtttcatgccactgcccaaaattgtgcaaggcagactatcaaccacgccacctccaggataaaacaagcccaactacaactgtgcgattaactact 31326864  T
Q  407 gca 409  Q
    |||    
T  31326865 gca 31326867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 207 - 409
Target Start/End: Original strand, 35601848 - 35602050
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    ||||||||||||||||||||||  |||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||    
T  35601848 tgttgtttttggatttccaaactattgtatttggattttcaaattctattatctaccgaagttgttactaggttgaatcacgaccaggtcgctcttttta 35601947  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  35601948 agacgtttcgtggcactgtccaaaattgtgcaagacagagtatcaaccacgccgcctccaggataaaacaaacccagctacaattgttcgattaactact 35602047  T
Q  407 gca 409  Q
    |||    
T  35602048 gca 35602050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 35639166 - 35638964
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    ||||||||||||||||||||||  |||||||||||||| |||||||||||||| |||||||||||||||| ||||| |||||| ||||||||||| ||||    
T  35639166 tgttgtttttggatttccaaactattgtatttggattttcaaattctattatctaccgaagttgttactaagttgaatcacgatcaggtcgctcttttta 35639067  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  35639066 agacgtttcgtggcactgcccaaaattgtgcaagacagcgtatcaaccacgccgcctccaggataaaacaagctcagctacaactgttcgattaactact 35638967  T
Q  407 gca 409  Q
    |||    
T  35638966 gca 35638964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 207 - 404
Target Start/End: Complemental strand, 10160893 - 10160696
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    ||||||||||||||||||||||  ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  10160893 tgttgtttttggatttccaaactcttgtatttggatttctaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 10160794  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaacta 404  Q
    ||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| || || ||||||| || |||||||    
T  10160793 agacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagctcagctgcaactgtgcggttaacta 10160696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 207 - 409
Target Start/End: Original strand, 30658189 - 30658391
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||||||||||||||| |||||||||| |||||||| |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  30658189 tgttgtttttggatttccaaactgttgtatttgcatttccaagttctattatctaccgaagttgttactatgttgagtcacgaccaggtcgctctcttta 30658288  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| | | |||||||||||||| |||| |||||||||||||||||||||||||||||||||||| || ||||||| || |||||||||    
T  30658289 agacgtttcgtggcactactcaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaactact 30658388  T
Q  407 gca 409  Q
    |||    
T  30658389 gca 30658391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 42926929 - 42926726
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||||||||| ||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||    
T  42926929 tgttgtttttggattttcaaactgtt-tatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgatcaggccgctctcttta 42926831  T
Q  307 agac--gtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaacta 404  Q
    ||||  ||||||||||| ||||||||||||||||||  ||| |||||||||||||||||||||||||| |||||| ||||||||||||| || |||||||    
T  42926830 agacacgtttcgtggcactgcccaaaattgtgcaaggtagactatcaaccacgccgcctccaggataatacaagctcaactacaactgtgcggttaacta 42926731  T
Q  405 ctgca 409  Q
    |||||    
T  42926730 ctgca 42926726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 207 - 404
Target Start/End: Complemental strand, 25478470 - 25478269
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattc----tattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctc 302  Q
    |||||||||||||||| |||||  ||||||||||||||||||||||    ||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  25478470 tgttgtttttggattttcaaactattgtatttggatttccaaattcattctattatctaccgaagttgttactaggttgagtcacaaccaggtcgctctc 25478371  T
Q  303 tttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaac 402  Q
    |||||||||||||||| || |||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||| |||||||||| ||| ||||    
T  25478370 tttaagacgtttcgtgacactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccagaataaaacaagcccagctacaactgtgcgaataac 25478271  T
Q  403 ta 404  Q
    ||    
T  25478270 ta 25478269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 207 - 394
Target Start/End: Original strand, 30631505 - 30631692
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||  ||||| |||||||||    
T  30631505 tgttgtttttggatttccaaactgttgtatttggatttccaagttctattatctaccgaagttgttactaggttgagtcacgattaggtcactctcttta 30631604  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgtt 394  Q
    | || |||||||||| |||| |||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  30631605 aaacttttcgtggcattgccaaaaattgtgcaagaaagactatcaaccacgccacctccaggataaaacaagcccaactgcaactgtt 30631692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 207 - 409
Target Start/End: Original strand, 12796851 - 12797053
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    ||||||||||||||||||| || |||||||||| |||| ||||||||||||||  |||||||||||| ||||||||||||||||||| ||||||||||||    
T  12796851 tgttgtttttggatttccacactgttgtatttgaattttcaaattctattatctgccgaagttgttattaggttgagtcacgaccagatcgctctcttta 12796950  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    |||||||| |||||| ||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||| ||  |||||||||| || |||||||||    
T  12796951 agacgttttgtggcactgcccaaaattgttcaagacagactatcaaccacgccgtctccaggataaaacaagtccggctacaactgtgcggttaactact 12797050  T
Q  407 gca 409  Q
    |||    
T  12797051 gca 12797053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 207 - 404
Target Start/End: Complemental strand, 25497498 - 25497297
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaa----ttctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctc 302  Q
    ||||||||||||||||||||||  |||||||| ||||||||||    |||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  25497498 tgttgtttttggatttccaaactattgtatttagatttccaaactcattctattatctaccgaaattgttactaggttgagtcacgaccaggtcgctctc 25497399  T
Q  303 tttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaac 402  Q
    |||||||||||||||  || |||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||| || |||||    
T  25497398 tttaagacgtttcgtaacactgcccaaatttgtgcaagtcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgtgcggttaac 25497299  T
Q  403 ta 404  Q
    ||    
T  25497298 ta 25497297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 213 - 409
Target Start/End: Original strand, 28603230 - 28603431
Alignment:
Q  213 ttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgt 312  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  28603230 ttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaaaacgt 28603329  T
Q  313 ttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacg----ccgcctccaggat-aaaacaagcccaactacaactgttcgattaactactg 407  Q
    |||||| || || |||||||||||||||||||| |||||||||||    |  |||||||||| ||||||||  || ||||||||||||||||||||||||    
T  28603330 ttcgtgacactgtccaaaattgtgcaagacagactatcaaccacgctacctacctccaggataaaaacaagttcagctacaactgttcgattaactactg 28603429  T
Q  408 ca 409  Q
    ||    
T  28603430 ca 28603431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 207 - 409
Target Start/End: Original strand, 29677308 - 29677509
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||| |||||||||||| |||| |||||||||| |||| |||||||||||||| | ||||||||||||||||||||||||||| || |||||||||||||    
T  29677308 tgttatttttggatttc-aaactgttgtatttgaattttcaaattctattatctagcgaagttgttactaggttgagtcacgatcatgtcgctctcttta 29677406  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| |||||||||||||||||  |||| |||||||||||||||||||||||||||| ||| ||| |||||||||| || |||||||||    
T  29677407 agacgtttcgtggcactgcccaaaattgtgcaaagcagactatcaaccacgccgcctccaggataaaataagtccagctacaactgtgcggttaactact 29677506  T
Q  407 gca 409  Q
    |||    
T  29677507 gca 29677509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 207 - 409
Target Start/End: Original strand, 29677694 - 29677895
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||    
T  29677694 tgttgtttttggatttc-aaactgttgtatttggatttccaaattctattatctagcgaagttgttactaggttgagtcacgaccaggtcgctctcatta 29677792  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    |||| ||| |||||| |||| ||||||||||||| || | ||||||||| ||||||| |||||||||| ||||||| |||||||||| || |||||||||    
T  29677793 agacatttagtggcactgccaaaaattgtgcaaggcaaactatcaaccaagccgcctacaggataaaaaaagcccagctacaactgtgcggttaactact 29677892  T
Q  407 gca 409  Q
    |||    
T  29677893 gca 29677895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 407 - 544
Target Start/End: Complemental strand, 25483191 - 25483054
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatac 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  25483191 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgactaattctttatcagtacgtgcacgatatac 25483092  T
Q  507 tttaaccgttccttttagagctctctaattattctgtg 544  Q
    ||||||||||||||||||||||||||||| ||| ||||    
T  25483091 tttaaccgttccttttagagctctctaatcattttgtg 25483054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 407 - 544
Target Start/End: Complemental strand, 25490797 - 25490660
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatac 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  25490797 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgactaattctttatcagtacgtgcacgatatac 25490698  T
Q  507 tttaaccgttccttttagagctctctaattattctgtg 544  Q
    ||||||||||||||||||||||||||||| ||| ||||    
T  25490697 tttaaccgttccttttagagctctctaatcattttgtg 25490660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 407 - 544
Target Start/End: Complemental strand, 17973772 - 17973635
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatac 506  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17973772 gcattagtcccatcctattggatgtgtttaggactttctttctagtaattcctttcgtcaaaggattgactaattctttatcagtacgtgcacgatatac 17973673  T
Q  507 tttaaccgttccttttagagctctctaattattctgtg 544  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  17973672 tttaaccgttccttttagagctctctaatcattctgtg 17973635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 407 - 544
Target Start/End: Original strand, 30652588 - 30652725
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatac 506  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  30652588 gcattagtcccatcctattggatgtgtttaggactttctttctagtaattcctttcgtcaaaggattgactaattctttatcagtacgtgcacgatatac 30652687  T
Q  507 tttaaccgttccttttagagctctctaattattctgtg 544  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  30652688 tttaaccgttccttttagagctctctaatcattctgtg 30652725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 407 - 544
Target Start/End: Complemental strand, 9183839 - 9183702
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatac 506  Q
    ||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9183839 gcattagtcccatcctcttggatgtgtttaggactttctttctagtaattcctttcgtcaaaggattgactaattctttatcagtacgtgcacgatatac 9183740  T
Q  507 tttaaccgttccttttagagctctctaattattctgtg 544  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  9183739 tttaaccgttccttttagagctctctaatcattctgtg 9183702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 261 - 409
Target Start/End: Complemental strand, 19094610 - 19094461
Alignment:
Q  261 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccg 360  Q
    ||||||||||||| ||||||||||||||| |||||||||||| |||| ||||||  ||| | |||||||||||||||||| || | |||||||||| |||    
T  19094610 accgaagttgttattaggttgagtcacgatcaggtcgctctccttaaaacgttttttggtactgcccaaaattgtgcaaggcaaaatatcaaccacaccg 19094511  T
Q  361 cctccaggat-aaaacaagcccaactacaactgttcgattaactactgca 409  Q
    |||||||||| ||||||||| || |||||||||| ||||||| |||||||    
T  19094510 cctccaggataaaaacaagctcagctacaactgtgcgattaattactgca 19094461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 207 - 389
Target Start/End: Complemental strand, 19578595 - 19578401
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattct------------attatccaccgaagttgttactaggttgagtcacgaccagg 294  Q
    ||||| ||||||||||||||||  |||||||||||||| ||||||||            | |||| ||||||||||||| |||||||||||||||||||     
T  19578595 tgttggttttggatttccaaactattgtatttggattttcaaattctactttgaaagagaatatctaccgaagttgttattaggttgagtcacgaccaga 19578496  T
Q  295 tcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaa 389  Q
    |||||||||||||||||||| |||||| | || |||||||||||||  ||| ||||||||| || ||||||||| ||||||||| ||||||||||    
T  19578495 tcgctctctttaagacgttttgtggcactacctaaaattgtgcaaggaagactatcaaccatgctgcctccagggtaaaacaagtccaactacaa 19578401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 261 - 406
Target Start/End: Complemental strand, 40847710 - 40847565
Alignment:
Q  261 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccg 360  Q
    ||||||||||||||||| |||||||||||||| |||| |||||||||||||||| |||||| ||  |||| ||||||||| || | |||||||||||||     
T  40847710 accgaagttgttactagattgagtcacgaccatgtcgttctctttaagacgttttgtggcactgttcaaagttgtgcaaggcaaactatcaaccacgcca 40847611  T
Q  361 cctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||| |||||||||||| ||||||||||||||  | |||||||||    
T  40847610 cctcctggataaaacaagtccaactacaactgtgtggttaactact 40847565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 266 - 407
Target Start/End: Complemental strand, 21523829 - 21523689
Alignment:
Q  266 agttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctcc 365  Q
    |||||||| ||||||||||||||||||||| ||| ||||||| ||||||||||||| ||||||||||||||||||  ||| ||||||||||||||| ||     
T  21523829 agttgttaataggttgagtcacgaccaggttgctatctttaa-acgtttcgtggcactgcccaaaattgtgcaagggagactatcaaccacgccgcttct 21523731  T
Q  366 aggataaaacaagcccaactacaactgttcgattaactactg 407  Q
    ||| |||||||||  || |||||||||| || ||||||||||    
T  21523730 aggttaaaacaagttcagctacaactgtgcggttaactactg 21523689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 407 - 522
Target Start/End: Original strand, 30647872 - 30647988
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattcttt-atcagtacgtgcacgatata 505  Q
    ||||||||  ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||  |||||||| |||||||| | || ||||||    
T  30647872 gcattagtgccatcctattggatgtgtatatgacttcctttctagtaattcctttcgtcaaaggattgacgaattctttcatcagtacatacatgatata 30647971  T
Q  506 ctttaaccgttcctttt 522  Q
    |||||||||||| ||||    
T  30647972 ctttaaccgttcatttt 30647988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 15489883 - 15489796
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccagg 294  Q
    ||||||||||||||||||||   |||||||| | |||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15489883 tgttgtttttggatttccaatatgttgtattagaattttcaaattctattatctaccgaagttgttactaggttgagtcacgaccagg 15489796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 256 - 404
Target Start/End: Complemental strand, 17545419 - 17545270
Alignment:
Q  256 tatccaccgaagttgttactaggttgagtcacgaccaggtcgctctct-ttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaacc 354  Q
    |||| |||||||||||||||||||||||| |||| ||||||| | | | ||||||||||||||| || |   |||| |||||||| | ||| ||||||||    
T  17545419 tatctaccgaagttgttactaggttgagttacgatcaggtcgttttttcttaagacgtttcgtgacacttttcaaagttgtgcaaaaaagactatcaacc 17545320  T
Q  355 acgccgcctccaggataaaacaagcccaactacaactgttcgattaacta 404  Q
    ||||| |||| |||||||||||||| || ||||||| || || |||||||    
T  17545319 acgccacctcgaggataaaacaagcacatctacaacagtgcggttaacta 17545270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 207 - 352
Target Start/End: Original strand, 20711358 - 20711516
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtattt-ggatttccaaattctatt------------atccaccgaagttgttactaggttgagtcacgaccag 293  Q
    |||||||||||||||| ||||| ||||||||| || |||||||||||||||            ||| ||||||||||||||||||||||||||||||||     
T  20711358 tgttgtttttggatttacaaactgttgtattttggttttccaaattctattttttaagaaaatatctaccgaagttgttactaggttgagtcacgaccat 20711457  T
Q  294 gtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaa 352  Q
     || |||  ||||||| ||||||| ||| ||| ||||||||||||||||||| ||||||    
T  20711458 atcactccttttaagatgtttcgtagcactgctcaaaattgtgcaagacagactatcaa 20711516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 277 - 376
Target Start/End: Original strand, 42914639 - 42914737
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    ||||||||||||||||||||| |||||||||||||||||| |||| |  || || |||||||||  ||| || ||||||||||| |||||||||||||||    
T  42914639 ggttgagtcacgaccaggtcgttctctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 42914737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 422 - 522
Target Start/End: Complemental strand, 24536424 - 24536327
Alignment:
Q  422 tattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatactttaaccgttccttt 521  Q
    ||||||||||||||| |||||||||   ||| |||||||| ||||||||||  | |||||||| |||||||||| || ||| ||||||||||||||||||    
T  24536424 tattggatgtgtttaggactttctt---agttattccttttgtcaaaggatcaactaattcttcatcagtacgtacatgatctactttaaccgttccttt 24536328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 271 - 376
Target Start/End: Original strand, 160031 - 160136
Alignment:
Q  271 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggat 370  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||  | || | ||||||||||||||||  ||  |||||||| || |||||||  |||    
T  160031 ttactaggttgagacacgaccaggtcgctctctttaatacgtttcacgacactacccaaaattgtgcaaggtaggctatcaaccgcgtcgcctccgagat 160130  T
Q  371 aaaaca 376  Q
    ||||||    
T  160131 aaaaca 160136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 279 - 376
Target Start/End: Original strand, 5089277 - 5089373
Alignment:
Q  279 ttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||| ||||||||||||||||||||||||||||| |||| |  || || |||||||||  ||| || ||||||||||| |||||||||||||||    
T  5089277 ttgagtcatgaccaggtcgctctctttaagacgtttcgcggcactatcc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 5089373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 42723546 - 42723451
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  42723546 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 42723451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 42728715 - 42728620
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  42728715 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 42728620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 44096302 - 44096397
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  44096302 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 44096397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 44754691 - 44754596
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  44754691 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 44754596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 44759857 - 44759762
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  44759857 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 44759762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 271 - 393
Target Start/End: Original strand, 14104580 - 14104701
Alignment:
Q  271 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccagga 369  Q
    |||||||| |||||| || || ||||||||||||||||||||||||||| || ||| ||||||||||||| ||| | ||||||||||| || | ||| ||    
T  14104580 ttactaggctgagtcgcggactaggtcgctctctttaagacgtttcgtgtcactgctcaaaattgtgcaa-acaaactatcaaccacgacgtccccatga 14104678  T
Q  370 taaaacaagcccaactacaactgt 393  Q
    |||||| |||| | ||||||||||    
T  14104679 taaaac-agcctagctacaactgt 14104701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 271 - 376
Target Start/End: Complemental strand, 44957542 - 44957437
Alignment:
Q  271 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccagga 369  Q
    |||||||| ||||||| | || |||||| |||||||||||||||| |||||| |||  ||||||||||||| |||| ||||||||||| |  ||||||||    
T  44957542 ttactaggctgagtcatggactaggtcgttctctttaagacgttttgtggcactgcaaaaaattgtgcaag-cagactatcaaccacgacatctccagga 44957444  T
Q  370 taaaaca 376  Q
    |||||||    
T  44957443 taaaaca 44957437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 40518567 - 40518472
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || |||| |||||||  ||| || ||||| ||||| |||||||||||||||    
T  40518567 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaaatagtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 40518472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 407 - 472
Target Start/End: Original strand, 32080735 - 32080800
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggat 472  Q
    ||||||||| ||||||||||||||||| || |||||||| | |||| |||||||| ||||||||||    
T  32080735 gcattagtctcatcctattggatgtgtgtaggactttctgtttagttattccttttgtcaaaggat 32080800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 407 - 451
Target Start/End: Complemental strand, 3175268 - 3175224
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctag 451  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||    
T  3175268 gcattagtcccatcctattgaatgtgtttatgactttctttctag 3175224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 257 - 412
Target Start/End: Original strand, 32079354 - 32079510
Alignment:
Q  257 atccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaa-ttgtgcaagacagattatcaacca 355  Q
    ||||||||||||| ||| | || |||||||||| ||||| |||||||||||||  ||| ||| |  || |||||| || || |||  ||| |||||| ||    
T  32079354 atccaccgaagttattattgggctgagtcacgatcaggttgctctctttaagaaattttgtgacgctgtccaaaatttatgtaaggtagactatcaatca 32079453  T
Q  356 cgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgcatta 412  Q
    ||  | ||||||||||||| | |  || |||||||||| |||||||||| |||||||    
T  32079454 cgttgtctccaggataaaaaaggttcagctacaactgtgcgattaactattgcatta 32079510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 315
Target Start/End: Original strand, 39542900 - 39542936
Alignment:
Q  279 ttgagtcacgaccaggtcgctctctttaagacgtttc 315  Q
    ||||||||||| |||||||||||||||||||||||||    
T  39542900 ttgagtcacgatcaggtcgctctctttaagacgtttc 39542936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 40847779 - 40847735
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaatt 251  Q
    |||||||||| ||||| ||||| ||||||||||||||||||||||    
T  40847779 tgttgtttttagattttcaaactgttgtatttggatttccaaatt 40847735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 389
Target Start/End: Original strand, 7734581 - 7734707
Alignment:
Q  262 ccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgc 361  Q
    |||||||| ||| | |||||||||||||| ||||||||  |||| ||| |||||| | || ||  | ||||||| |||||||   ||||||||||| |||    
T  7734581 ccgaagttattattgggttgagtcacgactaggtcgcttccttttagatgtttcgcgacactg-tctaaattgtacaagacatgctatcaaccacgtcgc 7734679  T
Q  362 ctccaggataaaacaagcccaactacaa 389  Q
    ||| |||| ||||||||  |||||||||    
T  7734680 ctctaggaaaaaacaagttcaactacaa 7734707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 277 - 315
Target Start/End: Original strand, 19538382 - 19538420
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagacgtttc 315  Q
    ||||||||||||||||||||||| |||||||||| ||||    
T  19538382 ggttgagtcacgaccaggtcgctttctttaagacatttc 19538420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 310
Target Start/End: Complemental strand, 6297984 - 6297951
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagac 310  Q
    ||||||||||||||||||||||| ||||||||||    
T  6297984 ggttgagtcacgaccaggtcgctttctttaagac 6297951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 321
Target Start/End: Complemental strand, 28751824 - 28751783
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggca 321  Q
    |||||||||||||||||||| ||||| |||||||||| ||||    
T  28751824 tgagtcacgaccaggtcgctttcttttagacgtttcgcggca 28751783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 271 - 315
Target Start/End: Complemental strand, 39542610 - 39542566
Alignment:
Q  271 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttc 315  Q
    |||| ||||||||||||||| | ||| ||||||||||||||||||    
T  39542610 ttaccaggttgagtcacgactaagtcactctctttaagacgtttc 39542566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 40392319 - 40392414
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    ||||||||||||||   | | |||||||||||||||| |||| | || ||  |||||||||  ||| || ||||||||||| |||||||||||||||    
T  40392319 tgagtcacgaccagactgttttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccacgccgtctccaggataaaaca 40392414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 168; Significance: 9e-90; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 168; E-Value: 9e-90
Query Start/End: Original strand, 206 - 409
Target Start/End: Original strand, 7029 - 7232
Alignment:
Q  206 ctgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 305  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7029 ctgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 7128  T
Q  306 aagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactac 405  Q
    |||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| || |||||||||| || ||||||||    
T  7129 aagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagctcagctacaactgtgcggttaactac 7228  T
Q  406 tgca 409  Q
    ||||    
T  7229 tgca 7232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 167; Significance: 3e-89; HSPs: 91)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 207 - 409
Target Start/End: Original strand, 31273447 - 31273649
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  31273447 tgttgtttttgaatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 31273546  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||  | |||||||||    
T  31273547 agacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgtgtggttaactact 31273646  T
Q  407 gca 409  Q
    |||    
T  31273647 gca 31273649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 5271586 - 5271386
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||||||||||||||| |||  ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  5271586 tgttgtttttggatttccaaactgtt--atttgaatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 5271489  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||| |    
T  5271488 agacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaagtccaactacaactgtttgattcactatt 5271389  T
Q  407 gca 409  Q
    |||    
T  5271388 gca 5271386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 37260046 - 37259844
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  37260046 tgttgtttttgaatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctttcttta 37259947  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| | | |||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||    
T  37259946 agacgtttcgtggcactactcaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgtgcggttaactact 37259847  T
Q  407 gca 409  Q
    |||    
T  37259846 gca 37259844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 37264733 - 37264531
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  37264733 tgttgtttttgaatttccaaactgttgtatttggatttccaaattctattatctatcgaagttgttactaggttgagtcacgaccaggtcgctctcttta 37264634  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| ||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||| |||||| ||| || |||||||||    
T  37264633 agacgtttcgtggcactgcccaaaattatgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaattgtgcggttaactact 37264534  T
Q  407 gca 409  Q
    |||    
T  37264533 gca 37264531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 205 - 409
Target Start/End: Original strand, 8693635 - 8693839
Alignment:
Q  205 tctgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 304  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||    
T  8693635 tctgttgtttttggattttcaaactgttgtatttggatttccaaattctattgtctatcgaagttgttactaggttgagtcacgaccaggtcgctctctt 8693734  T
Q  305 taagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaacta 404  Q
    ||||||||||||||||  | ||||||||||||||||||| | |||||||||||||||||| |||||||||||||| || |||||||||||||||||||||    
T  8693735 taagacgtttcgtggcgctacccaaaattgtgcaagacatactatcaaccacgccgcctcaaggataaaacaagctcagctacaactgttcgattaacta 8693834  T
Q  405 ctgca 409  Q
    |||||    
T  8693835 ctgca 8693839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 209 - 409
Target Start/End: Original strand, 31268962 - 31269162
Alignment:
Q  209 ttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaag 308  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31268962 ttgtttttgaatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaag 31269061  T
Q  309 acgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgc 408  Q
    ||||||||||||| |||| ||||||||||||| |||| |||||||||||||||||||||||||||||||| ||| ||||||| ||  | |||||||||||    
T  31269062 acgtttcgtggcactgcctaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagtccagctacaaccgtgtggttaactactgc 31269161  T
Q  409 a 409  Q
    |    
T  31269162 a 31269162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 207 - 409
Target Start/End: Original strand, 16420956 - 16421157
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||    
T  16420956 tgttgtttttggatttccaaactgttgtatttagatttccaa-ttctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcatta 16421054  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    |||| |||||||||| |||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||| |||||||||| || |||||||||    
T  16421055 agacatttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctacaggataaaacaagcccagctacaactgtgcggttaactact 16421154  T
Q  407 gca 409  Q
    |||    
T  16421155 gca 16421157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 5928388 - 5928186
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||| ||||||||||| |||||||||||| || |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  5928388 tgttgtttttagatttccaaactgttgtatttggagtttcaaattctattatctaccgaagttgttaccaggttgagtcacgaccaggtcgctctcttta 5928289  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||| |||| |||||| ||| |||||||||||||| |||| |||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||    
T  5928288 agatgtttagtggcactgctcaaaattgtgcaaggcagactatcaaccacaccgcctccaggataaaacaagcccagctgcaactgttcgattaactact 5928189  T
Q  407 gca 409  Q
    |||    
T  5928188 gca 5928186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 207 - 409
Target Start/End: Original strand, 55251647 - 55251847
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||| ||||||||||| ||||||||||||||||||| |||||||||| |  |||||||||||||||||||||||||||||||||||||| ||||    
T  55251647 tgttgtttttcgatttccaaactgttgtatttggatttccaa-ttctattatctattgaagttgttactaggttgagtcacgaccaggtcgctct-ttta 55251744  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| || |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||    
T  55251745 agacgtttcgtggcactgtccaaaattgtgcaagacagactatcaaccacgccacctccaggataaaacaagcccaactacaactgtacggttaactact 55251844  T
Q  407 gca 409  Q
    |||    
T  55251845 gca 55251847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 8030645 - 8030443
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    ||||||||||| |||| ||||| |||||||||| |||| |||||||||||||| |||||||||||||||||||||| |||| | ||||||||||||||||    
T  8030645 tgttgtttttgaattttcaaactgttgtatttgaattttcaaattctattatctaccgaagttgttactaggttgaatcacaatcaggtcgctctcttta 8030546  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    |||||||| |||||| ||||||||||||||||||| ||| ||||||| |||| ||||||||||||||||||||||| |||||| ||||||||||||||||    
T  8030545 agacgttttgtggcactgcccaaaattgtgcaagatagactatcaacaacgctgcctccaggataaaacaagcccagctacaaatgttcgattaactact 8030446  T
Q  407 gca 409  Q
    |||    
T  8030445 gca 8030443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 241 - 411
Target Start/End: Complemental strand, 33463491 - 33463321
Alignment:
Q  241 atttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaag 340  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||    
T  33463491 atttccaaattctattatctatcgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgtccaaagttgtgcaag 33463392  T
Q  341 acagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgcatt 411  Q
     |||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  33463391 gcagattgtcaaccccgccgcctccaggataaaacaagcacaactacaactgttcgattaactactgcatt 33463321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 207 - 378
Target Start/End: Complemental strand, 13522162 - 13521990
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtattt-ggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 305  Q
    |||||||||||||||| ||||| ||||||||| || |||||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||    
T  13522162 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 13522063  T
Q  306 aagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaag 378  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13522062 aagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaag 13521990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 212 - 409
Target Start/End: Complemental strand, 33469137 - 33468940
Alignment:
Q  212 tttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 311  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||| |||||| |||||||||||||    
T  33469137 tttttggatttccaaactgttgtatttggattttcaaattctattatctactgaagttgttactaggttgagtcacgactaggtcgttctctttaagacg 33469038  T
Q  312 tttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    ||| |||||| |||||||| ||||||||| |||| | ||||||||||| |||||| |||||||||||| || |||||| |||||||||||||||||||    
T  33469037 ttttgtggcactgcccaaagttgtgcaaggcagactgtcaaccacgccacctccatgataaaacaagctcagctacaattgttcgattaactactgca 33468940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 205 - 409
Target Start/End: Original strand, 19101901 - 19102105
Alignment:
Q  205 tctgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 304  Q
    ||||||||||||||||||  |||| |||||||||||||||||||||||||||||| | | |||||||||||||||| ||||||||| ||||| |||| ||    
T  19101901 tctgttgtttttggatttataaactgttgtatttggatttccaaattctattatctatcaaagttgttactaggttaagtcacgacgaggtcactctgtt 19102000  T
Q  305 taagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaacta 404  Q
    ||||||||||||||||| | | ||||||||||||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||||| || |||||||    
T  19102001 taagacgtttcgtggcactactcaaaattgtgcaaaacagactatcaaccacgtcgcctccaggataaaacaagtccaactacaactgtgcggttaacta 19102100  T
Q  405 ctgca 409  Q
    |||||    
T  19102101 ctgca 19102105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 207 - 378
Target Start/End: Complemental strand, 12824064 - 12823893
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||| |||||| |||| ||||||||||||||||||||||||||| || ||||||||||||| |||||||||||| |||||||||||||||||||    
T  12824064 tgttgttttttgatttctaaactgttgtatttggatttccaaattctattttctaccgaagttgttattaggttgagtcatgaccaggtcgctctcttta 12823965  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaag 378  Q
    |||| |||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  12823964 agacatttcgtggcactgcccaaaattgtgcaagacaaactatcaaccacgccgcctccaggataaaacaag 12823893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 32082259 - 32082058
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || |||| ||||    
T  32082259 tgttgtttttggatttccaaactgttgtatttggatttccaaattctattatcaaccgaagttgttactaggttgagtcacgaccagatcactcttttta 32082160  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    |||| |||| ||||| || ||||||||||||||| || | ||||||||||||||||||||||||||||||||| ||  ||||| ||| || |||||||||    
T  32082159 agacatttcatggcactgtccaaaattgtgcaaggca-actatcaaccacgccgcctccaggataaaacaagctcagttacaattgtgcggttaactact 32082061  T
Q  407 gca 409  Q
    |||    
T  32082060 gca 32082058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 230 - 397
Target Start/End: Original strand, 31765831 - 31766002
Alignment:
Q  230 gttgtatttggatttccaaattctatta----tccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgc 325  Q
    ||||| ||||||||||||||||||||||    || ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||    
T  31765831 gttgtttttggatttccaaattctattaattatctaccgaagttgttactaggttgagtcacaaccaggtcactctctttaagacgtttcgtggcactgc 31765930  T
Q  326 ccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcga 397  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  31765931 ccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagtccagctacaactgttcga 31766002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 209 - 404
Target Start/End: Original strand, 51697841 - 51698040
Alignment:
Q  209 ttgtttttggatttccaaacagttgtatttggatttccaaattc----tattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 304  Q
    |||||||||||||| |||||  ||||||||||||||||||||||    ||||||| ||||||||||||||||||||||||||||||||| ||||||| ||    
T  51697841 ttgtttttggattttcaaactattgtatttggatttccaaattcattctattatctaccgaagttgttactaggttgagtcacgaccagatcgctctttt 51697940  T
Q  305 taagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaacta 404  Q
    ||||||||||| || || ||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| ||| || |||||||    
T  51697941 taagacgtttcatgacactgctcaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagctcaactacaattgtgcggttaacta 51698040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 225 - 411
Target Start/End: Original strand, 13059354 - 13059540
Alignment:
Q  225 aaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatg 324  Q
    |||| ||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||| ||    
T  13059354 aaactgttgtatttggattttcaaattctattatctaccgaagttattactaggttgagtcatgaccagatcgctctctttaagacgtttcgtggcactg 13059453  T
Q  325 cccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgcatt 411  Q
    |  |||||||||||||||||| |||||||||| ||||||| || ||||||||||| || ||||||||||  | ||||||||||||||    
T  13059454 cataaaattgtgcaagacagactatcaaccactccgcctctagaataaaacaagctcagctacaactgtgtggttaactactgcatt 13059540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 219 - 409
Target Start/End: Original strand, 47244186 - 47244376
Alignment:
Q  219 atttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtg 318  Q
    ||||| |||| |||||||||||||||||||||| ||||||| | ||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  47244186 atttctaaactgttgtatttggatttccaaattatattatctatcgaagttgttagtaggttgagtcacgatcaggtcgccctctttaagacgtttcgtg 47244285  T
Q  319 gcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    ||| ||  ||||||| |  |||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||    
T  47244286 gcactgttcaaaattattgaagaaagactatcaaccacgccgcctccaggataaaacaagcacaactacaactgtgcggttaactactgca 47244376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 263 - 409
Target Start/End: Complemental strand, 42758868 - 42758722
Alignment:
Q  263 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcc 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||| ||||    
T  42758868 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagatgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgtcgcc 42758769  T
Q  363 tccaggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    ||||| ||||||| || ||||  |||||||| |||||||||||||||    
T  42758768 tccagaataaaactagtccaaaaacaactgtgcgattaactactgca 42758722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 407 - 544
Target Start/End: Complemental strand, 37262985 - 37262848
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatac 506  Q
    |||||||||  |||||||| |||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  37262985 gcattagtcttatcctattagatgtgtttaggactttctttctagtaattcctttcgtcaaaggatttactaattctttatcagtacgtgcacgatatac 37262886  T
Q  507 tttaaccgttccttttagagctctctaattattctgtg 544  Q
    ||||| ||||||||||||||||||||||| ||||||||    
T  37262885 tttaatcgttccttttagagctctctaatcattctgtg 37262848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 207 - 377
Target Start/End: Original strand, 19106545 - 19106715
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||||||||| ||||  | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||| ||||| ||||||    
T  19106545 tgttgtttttggattttcaaattgctgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacaagcagatcgctttcttta 19106644  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaa 377  Q
    ||||||||| | ||| |||||||||||||||||| | || ||||||||||| ||||||||| |||||||||    
T  19106645 agacgtttcatagcactgcccaaaattgtgcaaggctgactatcaaccacgtcgcctccagaataaaacaa 19106715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 224 - 408
Target Start/End: Original strand, 47574567 - 47574752
Alignment:
Q  224 caaacagttgtatttggattt-ccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaa 322  Q
    ||||| ||||||||| ||||| ||||||||||||||| |||||| |||||| ||||||||||||| | ||||||||||||||||||||||||| || ||     
T  47574567 caaactgttgtattttgattttccaaattctattatctaccgaatttgttattaggttgagtcacaatcaggtcgctctctttaagacgtttcttgacac 47574666  T
Q  323 tgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgc 408  Q
    | ||||||||||||||||||| | |||||| |||||||| |||||||||||||||| ||| |||||||||| || |||||||||||    
T  47574667 tacccaaaattgtgcaagacaaaatatcaatcacgccgcatccaggataaaacaagtccagctacaactgtgcggttaactactgc 47574752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 409 - 544
Target Start/End: Original strand, 13061140 - 13061274
Alignment:
Q  409 attagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatactt 508  Q
    ||||||| |||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||| ||||||||||||||||| |||| |||||||||    
T  13061140 attagtcccatcctattggatgtgttta-gactttctttctattatttcctttcgtcaaaggattgactaattctttatcagtacatgcatgatatactt 13061238  T
Q  509 taaccgttccttttagagctctctaattattctgtg 544  Q
    |||| |||||||||||||||||||||||||| ||||    
T  13061239 taactgttccttttagagctctctaattattttgtg 13061274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 407 - 544
Target Start/End: Complemental strand, 33467483 - 33467346
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatac 506  Q
    |||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||  | |||||||| ||||||||||||| | |||||    
T  33467483 gcattaatctcatcctattggatgtgtttaggactttctttctagtaattcctttcgtcaaaggatcaactaattcttcatcagtacgtgcatgttatac 33467384  T
Q  507 tttaaccgttccttttagagctctctaattattctgtg 544  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  33467383 tttaaccgttccttttagagctctctggttattctgtg 33467346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 240 - 408
Target Start/End: Original strand, 19906210 - 19906377
Alignment:
Q  240 gatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaa 339  Q
    ||||| |||||| ||||||| ||||||||| ||| ||||||||||||||| ||||||||||| |||||||||||  ||| || || | ||||||||||||    
T  19906210 gattttcaaattttattatctaccgaagttattattaggttgagtcacgatcaggtcgctctttttaagacgttcagtgacactgtctaaaattgtgcaa 19906309  T
Q  340 gacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgc 408  Q
    |||||| |||||||  |||||||||||||||||||||||| |||||||||||||| || ||||||||||    
T  19906310 gacagactatcaactccgccgcctccaggataaaacaagctcaactacaactgtttga-taactactgc 19906377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 407 - 544
Target Start/End: Original strand, 12876011 - 12876147
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatac 506  Q
    ||||||||| |||||  ||||||||||||  ||||||||||||||| |||||||||||||||||||  | |||||||||||||||||||||||||| |||    
T  12876011 gcattagtcccatcccgttggatgtgttttggactttctttctagttattcctttcgtcaaaggatcaactaattctttatcagtacgtgcacgatttac 12876110  T
Q  507 tttaaccgttccttttagagctctctaattattctgtg 544  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  12876111 tttaaccgttcc-tttagagctctctaattattatgtg 12876147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 48276807 - 48276616
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||| |||||||||||  |||  |||||||||||||||||||||||    ||| ||| |||||  ||||||||||| |||||| ||||||||||||||||    
T  48276807 tgttctttttggatttttaaattgttgtatttggatttccaaattc----atctacccaagtt--tactaggttgaatcacgatcaggtcgctctcttta 48276714  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    |||||||| || ||| ||  |||||||||||||     | ||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  48276713 agacgttttgttgcactgttcaaaattgtgcaa-----actatcaaccacgccgcctccaggataaaacaagttcagctacaactgttcgattaactact 48276619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 207 - 310
Target Start/End: Complemental strand, 32221266 - 32221163
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||||||||| ||||  ||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  32221266 tgttgtttttggattttcaaattgttgtatttggattttcaaattctattatctaccgaaattgttactaggttgagtcacgaccaggtcgctctcttta 32221167  T
Q  307 agac 310  Q
    ||||    
T  32221166 agac 32221163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 31729540 - 31729354
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||||||||||||||| | ||||||||||||||||| |||||||||| || |||||                || || ||||||||||||||||    
T  31729540 tgttgtttttggatttccaaactgctgtatttggatttccaagttctattatctactgaagt----------------catgatcaggtcgctctcttta 31729457  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| | |||||||||||||||| ||||  ||||| ||||||||||||||||||||||||| ||| || ||||||| || |||||||||    
T  31729456 agacgtttcgtggcactacccaaaattgtgcaaggcagacaatcaatcacgccgcctccaggataaaacaagtccagctgcaactgtgcggttaactact 31729357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 268 - 411
Target Start/End: Complemental strand, 19541269 - 19541126
Alignment:
Q  268 ttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccag 367  Q
    |||||||||||||||||||||| ||| ||| ||| |||||||  |||||||||| ||   |||||||| ||||||||| |||||||||||||||||  ||    
T  19541269 ttgttactaggttgagtcacgatcagatcgttctttttaagatatttcgtggcattgtttaaaattgtacaagacagactatcaaccacgccgcctatag 19541170  T
Q  368 gataaaacaagcccaactacaactgttcgattaactactgcatt 411  Q
    ||||||||||| ||| ||||||| ||||||||||||||||||||    
T  19541169 gataaaacaagtccagctacaacagttcgattaactactgcatt 19541126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 213 - 351
Target Start/End: Original strand, 51696931 - 51697072
Alignment:
Q  213 ttttggatttccaaacagttgtatttggatttccaaattc----tattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaag 308  Q
    ||||||||||||||||  |||||||||||||| |||||||    ||||||| | | || ||||||||||||||||||||||||||||||||||| |||||    
T  51696931 ttttggatttccaaacttttgtatttggattttcaaattcattctattatctatcaaa-ttgttactaggttgagtcacgaccaggtcgctctccttaag 51697029  T
Q  309 acgtttcgtggcaatgcccaaaattgtgcaagacagattatca 351  Q
    ||||||| ||||| |||||||||||||||||| |||| |||||    
T  51697030 acgtttcatggcactgcccaaaattgtgcaaggcagactatca 51697072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 407 - 522
Target Start/End: Complemental strand, 7899300 - 7899184
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattcttt-atcagtacgtgcacgatata 505  Q
    ||||| ||| |||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||| ||||||||| |||||||||| || ||||||    
T  7899300 gcatttgtcccatcctattggatgtgtttaggactttctttctagcaattcgtttcgtcaaaggattgactaattctttcatcagtacgtacaagatata 7899201  T
Q  506 ctttaaccgttcctttt 522  Q
    ||||||| |||||||||    
T  7899200 ctttaactgttcctttt 7899184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 411 - 522
Target Start/End: Original strand, 19103653 - 19103764
Alignment:
Q  411 tagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatacttta 510  Q
    ||||| ||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||| || ||| || ||||    
T  19103653 tagtcccatcctatttgatgtgtttaggactttctttctagtaatttctttcgtcaaaggattgactaattctgtatcagtacgtacatgatctatttta 19103752  T
Q  511 accgttcctttt 522  Q
    ||||||||||||    
T  19103753 accgttcctttt 19103764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 264 - 393
Target Start/End: Original strand, 12878222 - 12878351
Alignment:
Q  264 gaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcct 363  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |   |||||||||||||  |||| |||||| |||||| |||    
T  12878222 gaagttgttactaggttgagtcacgatcaggtcgctctctttaagacgtttcgtgacacttttcaaaattgtgcaaagcagactatcaatcacgccacct 12878321  T
Q  364 ccaggataaaacaagcccaactacaactgt 393  Q
    |||| ||||||||||  || ||||||||||    
T  12878322 ccagaataaaacaagttcagctacaactgt 12878351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 256 - 366
Target Start/End: Complemental strand, 13065888 - 13065778
Alignment:
Q  256 tatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaacca 355  Q
    |||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||| |||||||| ||||| |||  ||| |||||||||    
T  13065888 tatctaccgaagttgttactaggttgagtcacgactatgtcgctctctttaagacgtttcatggcactgcccaaagttgtgaaagggagactatcaacca 13065789  T
Q  356 cgccgcctcca 366  Q
    ||| |||||||    
T  13065788 cgcagcctcca 13065778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 263 - 378
Target Start/End: Original strand, 2819826 - 2819941
Alignment:
Q  263 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcc 362  Q
    ||||||||||||||| ||||||||||||||||||| | ||||||||| ||||||||| | || |||||||||||||||  ||| |||| |||| |||||     
T  2819826 cgaagttgttactagattgagtcacgaccaggtcgttttctttaagatgtttcgtggtactgtccaaaattgtgcaaggtagactatctaccatgccgcg 2819925  T
Q  363 tccaggataaaacaag 378  Q
    ||||||||||||||||    
T  2819926 tccaggataaaacaag 2819941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 263 - 409
Target Start/End: Original strand, 4550980 - 4551125
Alignment:
Q  263 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcc 362  Q
    |||||||||||||||||||||||| ||  |||||| ||  |||||||| |||  || || ||| |||| |||||||||||||| ||||||| ||||||||    
T  4550980 cgaagttgttactaggttgagtcatgattaggtcgttca-tttaagacattttatgccactgctcaaagttgtgcaagacagactatcaactacgccgcc 4551078  T
Q  363 tccaggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    ||||||||||||||| | ||| ||||||| | |||||||||||||||    
T  4551079 tccaggataaaacaaactcaattacaactctgcgattaactactgca 4551125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 264 - 406
Target Start/End: Original strand, 12874522 - 12874664
Alignment:
Q  264 gaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcct 363  Q
    |||||||||| ||||||||||||| | ||| ||||||||||||||||  ||||||||| || | ||||||||||||  ||||  ||||| ||||||||||    
T  12874522 gaagttgttattaggttgagtcacaatcagatcgctctctttaagacaattcgtggcactgtctaaaattgtgcaaagcagaccatcaatcacgccgcct 12874621  T
Q  364 ccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    |||||||||||||||| || ||| || ||| || |||||||||    
T  12874622 ccaggataaaacaagctcagctaaaattgtgcggttaactact 12874664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 263 - 387
Target Start/End: Complemental strand, 1151411 - 1151286
Alignment:
Q  263 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccg-c 361  Q
    ||||||||||||||||||||||| ||| ||| || |||||||||||||||||| || || |  |||||||||||||||||  | |||||| ||||||| |    
T  1151411 cgaagttgttactaggttgagtcgcgatcagatcactctctttaagacgtttcatgacactatccaaaattgtgcaagactaactatcaatcacgccgcc 1151312  T
Q  362 ctccaggataaaacaagcccaactac 387  Q
    |||||| ||||||||||| |||||||    
T  1151311 ctccagtataaaacaagcacaactac 1151286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 407 - 522
Target Start/End: Complemental strand, 8028753 - 8028637
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaatt-cctttcgtcaaaggattgaataattctttatcagtacgtgcacgatata 505  Q
    |||||| || ||||||||||||| |||||| | ||||||||||||||||| ||||||||||||||||||| || ||||||||||||| || || |||||     
T  8028753 gcattattcccatcctattggatatgtttaggtctttctttctagtaatttcctttcgtcaaaggattgactagttctttatcagtatgtacatgatatg 8028654  T
Q  506 ctttaaccgttcctttt 522  Q
     |||||| |||||||||    
T  8028653 ttttaactgttcctttt 8028637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 255 - 409
Target Start/End: Original strand, 32545068 - 32545223
Alignment:
Q  255 ttatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaa-ttgtg-caagacagattatcaa 352  Q
    ||||| || |||||||||||||||||||||||||| ||||||  ||| ||||||| |||||||||||  ||| |||| ||||| ||||||||| ||||||    
T  32545068 ttatctactgaagttgttactaggttgagtcacgatcaggtcaatct-tttaagatgtttcgtggcaccgcctaaaaattgtgtcaagacagactatcaa 32545166  T
Q  353 ccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    |||||  |  |||| |||||||||||| ||||||||| ||| ||| |||||||||||    
T  32545167 ccacgttgtatccatgataaaacaagctcaactacaattgtgcgactaactactgca 32545223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 407 - 520
Target Start/End: Original strand, 12316282 - 12316395
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatac 506  Q
    ||||||||| ||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||  | ||| || | || ||||||| ||  || |||    
T  12316282 gcattagtcccatcctactggatgtgtttaggactttctttctagttattcctttcgtcaaaggataaactaagtcatcattagtacgtacataatctac 12316381  T
Q  507 tttaaccgttcctt 520  Q
    ||||||||||||||    
T  12316382 tttaaccgttcctt 12316395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 653043 - 653138
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    ||||||||||||||||||||||||||||||||||||| |||| | ||| || |||||||||  ||| || ||||||||||| |||||||||||||||    
T  653043 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccc-aatttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 653138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 271 - 374
Target Start/End: Complemental strand, 10120913 - 10120811
Alignment:
Q  271 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggat 370  Q
    |||| |||||||||||||| |||||||||||||||||||||||||| |||| | ||| || |||||||||  ||| || ||||||||||| |||||||||    
T  10120913 ttaccaggttgagtcacgatcaggtcgctctctttaagacgtttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggat 10120815  T
Q  371 aaaa 374  Q
    ||||    
T  10120814 aaaa 10120811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 303 - 379
Target Start/End: Original strand, 16953107 - 16953183
Alignment:
Q  303 tttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagc 379  Q
    ||||||||||||||||| | | |||||||||||||||| |||| ||||||||||  |||||||||||||||||||||    
T  16953107 tttaagacgtttcgtggtactacccaaaattgtgcaaggcagactatcaaccacaacgcctccaggataaaacaagc 16953183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 270 - 406
Target Start/End: Original strand, 16947994 - 16948126
Alignment:
Q  270 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccagga 369  Q
    |||||| |||||||||| ||||| ||| |||| || |||||| ||| ||| | |||| |||||||||||||||    ||||||| |||||||||||||||    
T  16947994 gttactgggttgagtcatgaccatgtcactcttttcaagacgattcatggtactgcctaaaattgtgcaagac----tatcaactacgccgcctccagga 16948089  T
Q  370 taaaacaagcccaactacaactgttcgattaactact 406  Q
    |||||||||  ||   |||||||| ||||||||||||    
T  16948090 taaaacaagttcattgacaactgtgcgattaactact 16948126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 208 - 266
Target Start/End: Complemental strand, 55810315 - 55810257
Alignment:
Q  208 gttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaa 266  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||    
T  55810315 gttgtttttggattttcaaactgttgtatttggatttccaaattctattatctaccgaa 55810257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 292 - 377
Target Start/End: Complemental strand, 16596017 - 16595933
Alignment:
Q  292 aggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaa 377  Q
    ||||||||||||||||||||||| |||||| || ||||||||||||||| |||| | ||||||||| || | ||||||||||||||    
T  16596017 aggtcgctctctttaagacgttttgtggcactgtccaaaattgtgcaag-cagactgtcaaccacgacgtccccaggataaaacaa 16595933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 292 - 377
Target Start/End: Original strand, 20513118 - 20513202
Alignment:
Q  292 aggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaa 377  Q
    |||||||||||||||||| ||||||||||| ||| |||||||||||||| |||| ||||||||||| ||   ||||||||||||||    
T  20513118 aggtcgctctctttaagatgtttcgtggcactgctcaaaattgtgcaag-cagactatcaaccacgacgttcccaggataaaacaa 20513202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 36354176 - 36354271
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  36354176 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 36354271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 36359294 - 36359389
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  36359294 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 36359389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 39999069 - 39999164
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  39999069 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 39999164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 40004027 - 40004122
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  40004027 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 40004122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 53797629 - 53797724
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || ||||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  53797629 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 53797724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 54343203 - 54343298
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    ||||||||||||||||||||||||||||||||||||| |||| | |||  |||||||||||  ||| || ||||| ||||| || ||||||||||||    
T  54343203 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccc-gaattgtgcaaggtagactagcaaccgcgccgtctacaggataaaaca 54343298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 54348357 - 54348452
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  54348357 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 54348452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 271 - 393
Target Start/End: Complemental strand, 33723025 - 33722904
Alignment:
Q  271 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccagga 369  Q
    |||||||| |||||| || || ||||| ||||||||||||||||||||| || || ||||||||||||||| ||||  ||| |||||| || | ||||||    
T  33723025 ttactaggctgagtcgcggactaggtcactctctttaagacgtttcgtgacactgtccaaaattgtgcaag-cagaccatcgaccacgacgtccccagga 33722927  T
Q  370 taaaacaagcccaactacaactgt 393  Q
    |||||| |||||| ||||||||||    
T  33722926 taaaac-agcccagctacaactgt 33722904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 15020549 - 15020454
Alignment:
Q  292 aggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaa 389  Q
    |||| ||||||||||| |||||||||| || | ||||||||||||||| ||||| ||||||||||| |||  |||||||||||| ||| |||||||||    
T  15020549 aggttgctctctttaaaacgtttcgtgacacttcccaaaattgtgcaa-acagactatcaaccacgacgctcccaggataaaac-agcacaactacaa 15020454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 273 - 342
Target Start/End: Complemental strand, 52691158 - 52691089
Alignment:
Q  273 actaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagac 342  Q
    ||||||||||||||||| ||  |||||||||||||||||||| ||| |  ||||||||||||||||||||    
T  52691158 actaggttgagtcacgatcatatcgctctctttaagacgttttgtgactctgcccaaaattgtgcaagac 52691089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 265 - 341
Target Start/End: Original strand, 6070571 - 6070647
Alignment:
Q  265 aagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaaga 341  Q
    ||||||||||||| |||||||| |||||| ||||||||||||||| ||||| ||||| ||   ||||||||||||||    
T  6070571 aagttgttactagattgagtcatgaccagatcgctctctttaagatgtttcctggcattgtttaaaattgtgcaaga 6070647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 8980380 - 8980285
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  8980380 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 8980285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 8985500 - 8985405
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  8985500 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 8985405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 13700510 - 13700605
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  13700510 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 13700605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 21299928 - 21299833
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  21299928 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 21299833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 41393245 - 41393340
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  41393245 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 41393340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 51019468 - 51019373
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  51019468 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 51019373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 54991486 - 54991581
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  54991486 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 54991581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 277 - 376
Target Start/End: Original strand, 24490028 - 24490127
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    ||||||||||||||||| |||||||||||||||||||||| | || |   |||  |||||||||  ||| || ||||| |||| ||||||||||||||||    
T  24490028 ggttgagtcacgaccagatcgctctctttaagacgtttcgcgacactaatcaagtttgtgcaaggtagactaacaaccgcgccacctccaggataaaaca 24490127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 279 - 389
Target Start/End: Original strand, 40408196 - 40408307
Alignment:
Q  279 ttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattat-caaccacgccgcctccaggataaaacaa 377  Q
    |||||| ||||||||||| ||||||||||||||||| || ||| |||  ||| |||||||||| ||||||| ||| ||| |||| |  ||||||||||||    
T  40408196 ttgagttacgaccaggtcactctctttaagacgttttgtagcactgcttaaagttgtgcaagatagattatccaatcacaccgcttttaggataaaacaa 40408295  T
Q  378 gcccaactacaa 389  Q
    |  |||||||||    
T  40408296 gttcaactacaa 40408307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 13695159 - 13695254
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| ||||||||| |||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  13695159 tgagtcacgaccaggtcgctttctttaagatgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 13695254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 21305048 - 21304953
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| |||||||||| ||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  21305048 tgagtcacgaccaggtcgctttctttaagacttttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 21304953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 47046402 - 47046307
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||| | |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  47046402 tgagtcacgaccaggtcgttttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 47046307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 213 - 256
Target Start/End: Original strand, 23093112 - 23093155
Alignment:
Q  213 ttttggatttccaaacagttgtatttggatttccaaattctatt 256  Q
    ||||||||||| |||| |||||||||||||||||||||||||||    
T  23093112 ttttggatttcaaaactgttgtatttggatttccaaattctatt 23093155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 282 - 376
Target Start/End: Complemental strand, 8083121 - 8083027
Alignment:
Q  282 agtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||| |||||||||||||||||||||||||  |||| |  ||||  | |||||||  ||| || ||||| ||||||||||| |||||||||    
T  8083121 agtcacgatcaggtcgctctctttaagacgtttcacggcactatccaagttagtgcaaggtagactaacaaccgcgccgcctccaagataaaaca 8083027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 8652178 - 8652129
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttgga-tttccaaattctat 255  Q
    |||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  8652178 tgttgtttttggatttccaaactgttgtattttgattttccaaattctat 8652129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 8663985 - 8663936
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttgga-tttccaaattctat 255  Q
    |||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  8663985 tgttgtttttggatttccaaactgttgtattttgattttccaaattctat 8663936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 407 - 472
Target Start/End: Complemental strand, 17681517 - 17681452
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggat 472  Q
    ||||||||| ||||||||||||||| |||  |||||||| ||| || | |||||||||||||||||    
T  17681517 gcattagtctcatcctattggatgtattttggactttctctcttgttagtcctttcgtcaaaggat 17681452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 13710669 - 13710763
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||| ||||| |||||||||||||||| |||| | || ||  |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  13710669 tgagtcacgaccag-tcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 13710763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 406
Target Start/End: Complemental strand, 8649643 - 8649600
Alignment:
Q  363 tccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    |||||||||||||||||| |||||||||||| || |||||||||    
T  8649643 tccaggataaaacaagcctaactacaactgtgcggttaactact 8649600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 406
Target Start/End: Complemental strand, 8661450 - 8661407
Alignment:
Q  363 tccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    |||||||||||||||||| |||||||||||| || |||||||||    
T  8661450 tccaggataaaacaagcctaactacaactgtgcggttaactact 8661407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 316
Target Start/End: Complemental strand, 10318878 - 10318839
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagacgtttcg 316  Q
    |||||||||||||||| ||||||||||||||||| |||||    
T  10318878 ggttgagtcacgaccatgtcgctctctttaagacatttcg 10318839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 286 - 340
Target Start/End: Complemental strand, 30564504 - 30564450
Alignment:
Q  286 acgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaag 340  Q
    ||||| |||||||||||| |||||||||||| |||| | |||||| |||||||||    
T  30564504 acgactaggtcgctctctgtaagacgtttcgcggcactacccaaatttgtgcaag 30564450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 263 - 390
Target Start/End: Complemental strand, 39217490 - 39217367
Alignment:
Q  263 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcc 362  Q
    ||||||||||||| | ||||||||| || |||||| ||||||    |||||||||| || || | |||||||| ||||| | | ||| |||||| |  ||    
T  39217490 cgaagttgttactggattgagtcacaacgaggtcgttctctt----acgtttcgtgacactgtctaaaattgtacaagataaactattaaccacactacc 39217395  T
Q  363 tccaggataaaacaagcccaactacaac 390  Q
    || || |||||| |||||||||||||||    
T  39217394 tctagtataaaaaaagcccaactacaac 39217367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 277 - 315
Target Start/End: Original strand, 39319628 - 39319666
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagacgtttc 315  Q
    ||||||||||||| ||||||||| |||||||||||||||    
T  39319628 ggttgagtcacgatcaggtcgctttctttaagacgtttc 39319666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 207 - 256
Target Start/End: Original strand, 12878153 - 12878202
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctatt 256  Q
    |||||||||||||||||||||  ||| ||||||| || ||||||||||||    
T  12878153 tgttgtttttggatttccaaattgttatatttgggttcccaaattctatt 12878202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 472
Target Start/End: Original strand, 13687776 - 13687841
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggat 472  Q
    ||||||||| ||||||| ||||||| ||| ||||||||| |||  | | |||||||||||||||||    
T  13687776 gcattagtcccatcctactggatgtatttgtgactttctctctgtttagtcctttcgtcaaaggat 13687841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 310
Target Start/End: Original strand, 34560494 - 34560527
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagac 310  Q
    ||||||||||||||||||||||| ||||||||||    
T  34560494 ggttgagtcacgaccaggtcgctttctttaagac 34560527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 316
Target Start/End: Original strand, 34644536 - 34644593
Alignment:
Q  259 ccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcg 316  Q
    ||||||||| | ||||  ||||||||||||| || |||||| ||||||||||||||||    
T  34644536 ccaccgaagatattaccgggttgagtcacgatcatgtcgctttctttaagacgtttcg 34644593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 277 - 309
Target Start/End: Complemental strand, 3998155 - 3998123
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaaga 309  Q
    ||||||||||||||||||||||| |||||||||    
T  3998155 ggttgagtcacgaccaggtcgctttctttaaga 3998123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 161; Significance: 1e-85; HSPs: 71)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 204 - 404
Target Start/End: Original strand, 33416470 - 33416670
Alignment:
Q  204 ttctgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctct 303  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  33416470 ttctgttgtttttggatttccaaactgttgtatttgaatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcggtctct 33416569  T
Q  304 ttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaact 403  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||| || ||||||    
T  33416570 ttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaagataaaacaagcccagctacaactgtgcggttaact 33416669  T
Q  404 a 404  Q
    |    
T  33416670 a 33416670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 31450035 - 31449833
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  31450035 tgttgtttttggatttccaaagtgttgtatttggatttccaaattctattatctatcgaagttgttactaggttgagtcacgaccaggtcgctctcttta 31449936  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| || ||||||| || |||||||||    
T  31449935 agacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaagtccagctgcaactgtgcggttaactact 31449836  T
Q  407 gca 409  Q
    |||    
T  31449835 gca 31449833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 207 - 409
Target Start/End: Original strand, 17025861 - 17026063
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||| ||||| ||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17025861 tgttgtttttagattttcaaattgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 17025960  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||| |||| |||||||||||||||||||| | | |||||||||||||||||||||||    
T  17025961 agacgtttcgtggcactgcccaacattgtgcaagacagactatcaatcacgtcgcctccaggataaaacaagtctagctacaactgttcgattaactact 17026060  T
Q  407 gca 409  Q
    |||    
T  17026061 gca 17026063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 207 - 409
Target Start/End: Original strand, 17556353 - 17556555
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||| ||||| ||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17556353 tgttgtttttagattttcaaattgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 17556452  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||| |||| |||||||||||||||||||| | | |||||||||||||||||||||||    
T  17556453 agacgtttcgtggcactgcccaacattgtgcaagacagactatcaatcacgtcgcctccaggataaaacaagtctagctacaactgttcgattaactact 17556552  T
Q  407 gca 409  Q
    |||    
T  17556553 gca 17556555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 18876535 - 18876334
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||    
T  18876535 tgttgtttttggatttccaaactgctgtatttggatttccaaattctattatataccgaagttgttactaggttgagtcacgaccaggtcgctct-ttta 18876437  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | || |||||||||| || |||||||||    
T  18876436 agacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaaactcatctacaactgtgcggttaactact 18876337  T
Q  407 gca 409  Q
    |||    
T  18876336 gca 18876334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 204 - 404
Target Start/End: Complemental strand, 44926095 - 44925895
Alignment:
Q  204 ttctgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctct 303  Q
    ||||||||||||| ||||||||||| | ||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  44926095 ttctgttgttttttgatttccaaactgctgtatttggattttcaaattcttttatctaccgaagttgttactaggttgagtcacgaccaggtcgctctct 44925996  T
Q  304 ttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaact 403  Q
    |||| ||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||  || |||||||| | || ||||||    
T  44925995 ttaaaacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaaggtcatctacaactatgcggttaact 44925896  T
Q  404 a 404  Q
    |    
T  44925895 a 44925895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 207 - 409
Target Start/End: Original strand, 34118392 - 34118594
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    ||||||||||||||||||||||   ||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  34118392 tgttgtttttggatttccaaactaatgtatttagatttccaaattctattatctactgaagttgttactaggttgagtcacgaccaggtcgctctcttta 34118491  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||| ||||| |||||||||||||||||| |||| ||||||||||| |||||  ||||||||||||||||| |||||||||| |  |||||||||    
T  34118492 agacgtttcatggcactgcccaaaattgtgcaaggcagactatcaaccacgtcgcctttaggataaaacaagcccagctacaactgtgctgttaactact 34118591  T
Q  407 gca 409  Q
    |||    
T  34118592 gca 34118594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 38182405 - 38182204
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    ||||||||||| |||  ||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  38182405 tgttgtttttgaattgtcaaactgttgtatttggatttccaaattctattatctaccgaagttgttac-aggttgagtcacgaccaggtcgctctcttta 38182307  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    | ||||||||||||| | ||||| |||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||| |  |||||||||    
T  38182306 aaacgtttcgtggcacttcccaagattgtgcaaggcagattatcaaccacgccgcctccaggataaaacaagcacagctacaactgtgctgttaactact 38182207  T
Q  407 gca 409  Q
    |||    
T  38182206 gca 38182204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 1911138 - 1910936
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||| | ||||||||||| |||||| |||||||| ||||||||||||||||    
T  1911138 tgttgtttttggatttccaaactgttgtatttggattttcaaattctattatctatcgaagttgttattaggttaagtcacgatcaggtcgctctcttta 1911039  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| |   |||||||||||||  |||| |||||||||||| |||||||| ||||||||||| ||||||||||||| || |||||||||    
T  1911038 agacgtttcgtggcactagtcaaaattgtgcaaagcagactatcaaccacgctgcctccagtataaaacaagctcaactacaactgtgcggttaactact 1910939  T
Q  407 gca 409  Q
    |||    
T  1910938 gca 1910936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 207 - 409
Target Start/End: Original strand, 1807398 - 1807601
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||||||||| ||||  |||||||||| |||| | |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  1807398 tgttgtttttggattttcaaattgttgtatttgaattttccaattctattatctaccgaagttgttactaggttgagtcacgactaggtcgctctcttta 1807497  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggat-aaaacaagcccaactacaactgttcgattaactac 405  Q
    |||||||||||| || |||||||||||||||||| |||| |||||||||||||||||| ||||| |||||||| ||| |||||||||| || |||||||     
T  1807498 agacgtttcgtgacactgcccaaaattgtgcaaggcagactatcaaccacgccgcctctaggataaaaacaagtccagctacaactgtgcggttaactag 1807597  T
Q  406 tgca 409  Q
    ||||    
T  1807598 tgca 1807601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 262 - 409
Target Start/End: Complemental strand, 40125999 - 40125852
Alignment:
Q  262 ccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgc 361  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||    
T  40125999 ccgaagttgttactaggttgagtcacgaccagatcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgc 40125900  T
Q  362 ctccaggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  40125899 ctccaagataaaacaagcccagctacaactgttcgattaactactgca 40125852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 207 - 340
Target Start/End: Complemental strand, 40130855 - 40130722
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  40130855 tgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 40130756  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaag 340  Q
    ||||||||||||||| ||||||||||||||||||    
T  40130755 agacgtttcgtggcactgcccaaaattgtgcaag 40130722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 209 - 409
Target Start/End: Complemental strand, 28559821 - 28559621
Alignment:
Q  209 ttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaag 308  Q
    |||||||||||||||||||| |||||||||||||||  ||||| ||||||| |||||||||||||||||||||||||||||| | |||||||||| ||||    
T  28559821 ttgtttttggatttccaaactgttgtatttggatttataaattatattatctaccgaagttgttactaggttgagtcacgacaatgtcgctctctataag 28559722  T
Q  309 acgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgc 408  Q
    ||||||||||||| || ||||||||||||||| || | |||||||||||||| || |||||||||| |||||||  || ||||||||||||||||| |||    
T  28559721 acgtttcgtggcactgtccaaaattgtgcaaggcaaactatcaaccacgccgtctgcaggataaaataagcccagttagaactgttcgattaactattgc 28559622  T
Q  409 a 409  Q
    |    
T  28559621 a 28559621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 212 - 354
Target Start/End: Complemental strand, 4238479 - 4238337
Alignment:
Q  212 tttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 311  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  4238479 tttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaacacg 4238380  T
Q  312 tttcgtggcaatgcccaaaattgtgcaagacagattatcaacc 354  Q
    |||| ||||| |||||||||||||||||| |||| ||||||||    
T  4238379 tttcatggcactgcccaaaattgtgcaaggcagactatcaacc 4238337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 255 - 409
Target Start/End: Original strand, 19166608 - 19166762
Alignment:
Q  255 ttatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaacc 354  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| | |||| ||||||||    
T  19166608 ttatctaccgaagttgttactaggttgagtcacgaccatgtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcacggcagactatcaacc 19166707  T
Q  355 acgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    ||||||||||||||||||||||||| ||||||||||||| |  ||||||||||||    
T  19166708 acgccgcctccaggataaaacaagctcaactacaactgtgctgttaactactgca 19166762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 407 - 544
Target Start/End: Complemental strand, 4241427 - 4241290
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatac 506  Q
    ||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  4241427 gcattagtcccatcctgttggatgtgtttaggactttctttctagtaattcctttcgtcaaaggattgactaattctttatcaatacgtgcacgatatac 4241328  T
Q  507 tttaaccgttccttttagagctctctaattattctgtg 544  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  4241327 tttaaccgttccttttagagctctctaatcattctgtg 4241290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 212 - 354
Target Start/End: Complemental strand, 4243218 - 4243076
Alignment:
Q  212 tttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 311  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  4243218 tttttggatttccaaactgttgtatttggatttccaaattctattatctatcgaagttgttactaggttgagtcacgaccaggtcgctctctttaacacg 4243119  T
Q  312 tttcgtggcaatgcccaaaattgtgcaagacagattatcaacc 354  Q
    |||| ||||| |||||||||||||||||| |||| ||||||||    
T  4243118 tttcatggcactgcccaaaattgtgcaaggcagactatcaacc 4243076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 407 - 544
Target Start/End: Original strand, 17021934 - 17022071
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatac 506  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  17021934 gcattagtctcatcctattggatgtgtttatgactttctttctagcaattcttttcgtcaaaggattgactaattctttatcagtacatgcacgatatac 17022033  T
Q  507 tttaaccgttccttttagagctctctaattattctgtg 544  Q
    ||||||||||||||||||| ||||||||| ||| ||||    
T  17022034 tttaaccgttccttttagaactctctaatcattttgtg 17022071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 263 - 409
Target Start/End: Complemental strand, 15875781 - 15875635
Alignment:
Q  263 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcc 362  Q
    ||||||||||||||  |||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||| ||||||||||||||||    
T  15875781 cgaagttgttactaaattgagttacgaccaggtcgctctctttaggacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcc 15875682  T
Q  363 tccaggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    ||||||||||||||||| || |||||| ||| |||||||||||||||    
T  15875681 tccaggataaaacaagctcagctacaattgtacgattaactactgca 15875635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 407 - 544
Target Start/End: Original strand, 17552371 - 17552508
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatac 506  Q
    ||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||    
T  17552371 gcattagtcccatcctgttggatgtgtttaggactttctttctagtaattcctttcgtcaaaggattgactaattctttatcagtacttgtacgatatac 17552470  T
Q  507 tttaaccgttccttttagagctctctaattattctgtg 544  Q
    ||||||||||||||||||| ||||||||| ||| ||||    
T  17552471 tttaaccgttccttttagatctctctaatcattttgtg 17552508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 261 - 409
Target Start/End: Complemental strand, 17953988 - 17953839
Alignment:
Q  261 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccg 360  Q
    |||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  17953988 accgaagttgttactaggttgagtaacgaccatgtcgctttctttaagacgtttcgtggcactgcccaaaattgtgcaagacagaatatcaaccacgccg 17953889  T
Q  361 cctccaggataaaacaagcccaactac-aactgttcgattaactactgca 409  Q
    |||||| |||||||||||| || |||| ||||||  ||||||||||||||    
T  17953888 cctccaagataaaacaagctcacctacaaactgtgtgattaactactgca 17953839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 253 - 409
Target Start/End: Original strand, 36683551 - 36683707
Alignment:
Q  253 tattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaa 352  Q
    ||||||| |||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||| ||| |||| ||||||    
T  36683551 tattatctaccggagttgttactaggttgagtcatgactaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgtaaggcagactatcaa 36683650  T
Q  353 ccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    |||||| |||||||||||||||||||  || ||||| |||| |||||||||||||||    
T  36683651 ccacgctgcctccaggataaaacaaggtcagctacatctgtgcgattaactactgca 36683707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 256 - 404
Target Start/End: Original strand, 24090602 - 24090750
Alignment:
Q  256 tatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaacca 355  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||| |||||| ||    
T  24090602 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaagttgtgcaaggcagaatatcaatca 24090701  T
Q  356 cgccgcctccaggataaaacaagcccaactacaactgttcgattaacta 404  Q
    || |||||||| ||||||||||||  | |||||||||| || |||||||    
T  24090702 cgtcgcctccaagataaaacaagcttatctacaactgtgcggttaacta 24090750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 207 - 409
Target Start/End: Original strand, 2965545 - 2965758
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctatt------------atccaccgaagttgttactaggttgagtcacgaccagg 294  Q
    ||||||||||||||||| |||| | |||||||| ||||||||||||||||            ||||||| || |||||||||||| ||||||||||||||    
T  2965545 tgttgtttttggatttcgaaactgctgtatttgaatttccaaattctattttgaaaagaaatatccaccaaatttgttactaggt-gagtcacgaccagg 2965643  T
Q  295 tcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgtt 394  Q
    ||||||||||||| ||||||||||||| |||| |||||||||||||||| | |||||||||| ||||||| ||||||||||||| ||| |||||||| |     
T  2965644 tcgctctctttaaaacgtttcgtggcactgcctaaaattgtgcaagacacactatcaaccacaccgcctctaggataaaacaagtccagctacaactatg 2965743  T
Q  395 cgattaactactgca 409  Q
    |  ||||||||||||    
T  2965744 cagttaactactgca 2965758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 407 - 522
Target Start/End: Original strand, 21960132 - 21960248
Alignment:
Q  407 gcattagtcacatcctattggatgtgttt-atgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatata 505  Q
    ||||||||| ||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  21960132 gcattagtctcatcctattcgatgtgttttaggactttctttctagtaattcctttcgtcaaaggattgactaattctttatcagtacgtacatgatata 21960231  T
Q  506 ctttaaccgttcctttt 522  Q
    |||||||||||||||||    
T  21960232 ctttaaccgttcctttt 21960248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 256 - 411
Target Start/End: Complemental strand, 23548752 - 23548597
Alignment:
Q  256 tatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaacca 355  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||   ||||||||||||| | || |||||||||    
T  23548752 tatctaccgaagttgttactaggttgagtcacgacctggtcgctctctataagacgtttcgtggcactgtgtaaaattgtgcaaggcggactatcaacca 23548653  T
Q  356 cgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgcatt 411  Q
    || |||||| |||||||||||||  || |||||||||  || ||||||||||||||    
T  23548652 cgtcgcctctaggataaaacaagttcagctacaactgcgcggttaactactgcatt 23548597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 207 - 382
Target Start/End: Complemental strand, 43302880 - 43302712
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||||||||| ||||| ||||||| ||||||||||| ||||||        |||||||||| |||| ||||| |||||| ||||| ||||||||    
T  43302880 tgttgtttttggattttcaaactgttgtatatggatttccaagttctat--------gaagttgttattaggctgagttacgacccggtcgttctcttta 43302789  T
Q  307 agacgtttcgtggcaatgcccaaaa-ttgtgcaagacagattatcaaccacgccgcctccaggataaaacaagccca 382  Q
    ||||||||||||||| || |||||| |||||||||  ||| ||||||||||||||||||||||||||||||||||||    
T  43302788 agacgtttcgtggcactgtccaaaaattgtgcaaggtagactatcaaccacgccgcctccaggataaaacaagccca 43302712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 407 - 522
Target Start/End: Complemental strand, 8329724 - 8329608
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattcttt-atcagtacgtgcacgatata 505  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| | ||||||||| |||||||||| || ||||||    
T  8329724 gcattagtcccatcctattggatgtgtttaggactttctttctagtaattcctttcgtcaaatgatttactaattctttcatcagtacgtacatgatata 8329625  T
Q  506 ctttaaccgttcctttt 522  Q
    |||||||||||||||||    
T  8329624 ctttaaccgttcctttt 8329608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 249 - 386
Target Start/End: Complemental strand, 2355586 - 2355449
Alignment:
Q  249 attctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagatta 348  Q
    ||||||||||| ||| ||||||||||||| ||||||||| ||||  || |||| |||||||||||||||| || |   ||||||||||||||||||| ||    
T  2355586 attctattatctaccaaagttgttactagattgagtcaccaccatatcactctttttaagacgtttcgtgacacttttcaaaattgtgcaagacagacta 2355487  T
Q  349 tcaaccacgccgcctccaggataaaacaagcccaacta 386  Q
    |||||||||||||||| | |||||||||| ||||||||    
T  2355486 tcaaccacgccgcctcaaagataaaacaaacccaacta 2355449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 207 - 289
Target Start/End: Original strand, 19915073 - 19915155
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacga 289  Q
    |||||||||||||||| ||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  19915073 tgttgtttttggatttacaaactgttgtatttgtatttccaaattctattatctaccgaagttgttactaggttgagtcacga 19915155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 279 - 406
Target Start/End: Original strand, 7902561 - 7902688
Alignment:
Q  279 ttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaag 378  Q
    |||||||||||||| |||||||||||||| | |||||||| || | |||||||||||  |||||| |||||||||||||||| ||| |||||||||||||    
T  7902561 ttgagtcacgaccaagtcgctctctttaaaatgtttcgtgacattacccaaaattgtataagacatattatcaaccacgccgtctctaggataaaacaag 7902660  T
Q  379 cccaactacaactgttcgattaactact 406  Q
     ||| | |||| ||| ||||||||||||    
T  7902661 tccatcaacaattgtgcgattaactact 7902688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 270 - 409
Target Start/End: Complemental strand, 28564927 - 28564786
Alignment:
Q  270 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccagg- 368  Q
    |||||||||||||||||||| ||||||||||||| ||| || |||| || || ||| ||||||||| ||||||||| ||| |||||||||| || ||||     
T  28564927 gttactaggttgagtcacgatcaggtcgctctctataaaacatttcatgacactgctcaaaattgttcaagacagactattaaccacgccgtctgcagga 28564828  T
Q  369 -ataaaacaagcccaactacaactgttcgattaactactgca 409  Q
     |||||||||||||   || ||||||||||||||||| ||||    
T  28564827 tataaaacaagcccggttagaactgttcgattaactattgca 28564786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 270 - 409
Target Start/End: Complemental strand, 28572550 - 28572409
Alignment:
Q  270 gttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccagg- 368  Q
    |||||||||||||||||||| ||||||||||||| ||| || |||| || || ||| ||||||||| ||||||||| ||| |||||||||| || ||||     
T  28572550 gttactaggttgagtcacgatcaggtcgctctctataaaacatttcatgacactgctcaaaattgttcaagacagactattaaccacgccgtctgcagga 28572451  T
Q  369 -ataaaacaagcccaactacaactgttcgattaactactgca 409  Q
     |||||||||||||   || ||||||||||||||||| ||||    
T  28572450 tataaaacaagcccggttagaactgttcgattaactattgca 28572409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 407 - 544
Target Start/End: Original strand, 28861286 - 28861421
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacg--atat 504  Q
    ||||||||| || | |||| ||||||||||  ||||||||   ||| |||||||||||||||||||  | |||||||| |||||||||||||||  ||||    
T  28861286 gcattagtcccaacatattagatgtgtttaatactttctt---agttattcctttcgtcaaaggatcaagtaattcttcatcagtacgtgcacgatatat 28861382  T
Q  505 actttaaccgttccttttagagctctctaattattctgtg 544  Q
    |||||||||||||| ||||||||||| |||||||| ||||    
T  28861383 actttaaccgttcc-tttagagctctgtaattattttgtg 28861421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 279 - 376
Target Start/End: Complemental strand, 33616823 - 33616727
Alignment:
Q  279 ttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||||||||||||||||||||| |||| | ||| || |||||||||  ||| || ||||||||||| |||||||||||||||    
T  33616823 ttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 33616727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 277 - 376
Target Start/End: Original strand, 19430011 - 19430109
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||||||||||||||||||||||| |||| | ||| || |||||||||  ||| || ||||||||||| ||| |||||||||||    
T  19430011 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctctaggataaaaca 19430109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 277 - 376
Target Start/End: Original strand, 19435513 - 19435611
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||||||||||||||||||||||| |||| | ||| || |||||||||  ||| || ||||||||||| ||| |||||||||||    
T  19435513 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctctaggataaaaca 19435611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 277 - 376
Target Start/End: Original strand, 19566160 - 19566258
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||||||||||||||||||||||| |||| | ||| || |||||||||  ||| || ||||||||||| ||| |||||||||||    
T  19566160 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctctaggataaaaca 19566258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 277 - 376
Target Start/End: Original strand, 19571662 - 19571760
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||||||||||||||||||||||| |||| | ||| || |||||||||  ||| || ||||||||||| ||| |||||||||||    
T  19571662 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctctaggataaaaca 19571760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 277 - 376
Target Start/End: Original strand, 31030525 - 31030623
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||||||||||||||||||||||| | || | ||| ||||| ||||||  ||| || ||||||||||| |||||||||||||||    
T  31030525 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcgacactaccc-aaattatgcaaggtagactaacaaccacgccgtctccaggataaaaca 31030623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 261 - 376
Target Start/End: Original strand, 29220246 - 29220359
Alignment:
Q  261 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccg 360  Q
    ||||||||||||| ||||||||||||||||  |||| ||||  ||||||||||| ||| || ||  ||||||||||||||  ||| |||||||||||| |    
T  29220246 accgaagttgttagtaggttgagtcacgactgggtcactct--ttaagacgttttgtgtcactgatcaaaattgtgcaaggtagactatcaaccacgctg 29220343  T
Q  361 cctccaggataaaaca 376  Q
    |||| |||||||||||    
T  29220344 cctcaaggataaaaca 29220359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 32015700 - 32015795
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||||||||||||||||||||||||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  32015700 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 32015795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 278 - 412
Target Start/End: Original strand, 17793450 - 17793584
Alignment:
Q  278 gttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaa 377  Q
    |||||||||| |||| |||| |||||||||||||||||  | || ||| ||||||||| |||| || | ||||||||||| |  ||||| ||||||||||    
T  17793450 gttgagtcacaaccatgtcgttctctttaagacgtttcacgacactgctcaaaattgtacaagtcaaactatcaaccacgtcatctccacgataaaacaa 17793549  T
Q  378 gcccaactacaactgttcgattaactactgcatta 412  Q
    | | |||||||||| | | ||||||| ||||||||    
T  17793550 gtctaactacaactttgctattaacttctgcatta 17793584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 292 - 377
Target Start/End: Original strand, 2469986 - 2470070
Alignment:
Q  292 aggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaa 377  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||||||| |||| ||||||| ||| || | ||||||||||||||    
T  2469986 aggtcgctctctttaagacgttttgtggcactgctcaaaattgtgcaag-cagactatcaactacgacgtccccaggataaaacaa 2470070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 271 - 393
Target Start/End: Complemental strand, 4544356 - 4544235
Alignment:
Q  271 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccagga 369  Q
    |||||||| ||||||||| || |||||||||||||||||||||||| ||||| ||| ||||||||||||||  ||| ||||||||||  || | | ||||    
T  4544356 ttactaggctgagtcacggactaggtcgctctctttaagacgtttcatggcactgctcaaaattgtgcaag-tagactatcaaccactacgtccctagga 4544258  T
Q  370 taaaacaagcccaactacaactgt 393  Q
    |||||| || ||| ||||||||||    
T  4544257 taaaac-agtccagctacaactgt 4544235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 271 - 357
Target Start/End: Original strand, 19954262 - 19954348
Alignment:
Q  271 ttactaggttgagtcac-gaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacg 357  Q
    ||||||||||||||| | ||| || |||||||||||||||||||| |||||| ||||||||||||| |||| |||| |||||||||||    
T  19954262 ttactaggttgagtcgcagactagatcgctctctttaagacgttttgtggcactgcccaaaattgtacaag-cagactatcaaccacg 19954348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 323 - 409
Target Start/End: Original strand, 10933474 - 10933559
Alignment:
Q  323 tgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    ||||||||||||||| ||| ||  ||||||||||| |||||||| ||||||||||  ||||||||||||||  ||||||||||||||    
T  10933474 tgcccaaaattgtgccagataggctatcaaccacgtcgcctccatgataaaacaa-accaactacaactgtgtgattaactactgca 10933559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 271 - 376
Target Start/End: Original strand, 13584341 - 13584453
Alignment:
Q  271 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgccca-------aaattgtgcaagacagattatcaaccacgccgcct 363  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||| |||| | ||||       || |||||||||  ||| || ||||||||||| ||    
T  13584341 ttaccaggttgaatcacgaccaggtcgctctctttaagacgtttcgcggcactacccaagttcccaagttgtgcaaggtagactaacaaccacgccgtct 13584440  T
Q  364 ccaggataaaaca 376  Q
    |||||||||||||    
T  13584441 ccaggataaaaca 13584453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 271 - 376
Target Start/End: Original strand, 19949808 - 19949913
Alignment:
Q  271 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccagga 369  Q
    |||||||| ||||||||| || | |||||||||||||||| ||||||||||| |||||||||||| ||||| |||| ||||||||| | || |  |||||    
T  19949808 ttactaggctgagtcacggactacgtcgctctctttaagaagtttcgtggcactgcccaaaattgagcaag-cagactatcaaccatgacgtcctcagga 19949906  T
Q  370 taaaaca 376  Q
    |||||||    
T  19949907 taaaaca 19949913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 263 - 385
Target Start/End: Complemental strand, 24673438 - 24673316
Alignment:
Q  263 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcc 362  Q
    |||||||||||||||||||||| |||| ||| ||||||| ||||| |||||||||| || ||  ||||||| ||||||| ||| ||||| ||||  | |     
T  24673438 cgaagttgttactaggttgagttacgatcagatcgctctttttaaaacgtttcgtgacactgttcaaaattatgcaagatagactatcacccacaacact 24673339  T
Q  363 tccaggataaaacaagcccaact 385  Q
    ||||  ||||||||||| |||||    
T  24673338 tccaaaataaaacaagctcaact 24673316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 312 - 409
Target Start/End: Original strand, 12820370 - 12820467
Alignment:
Q  312 tttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    |||||||||| |||| ||||||||||||  || | |||||| ||| |||||||||||||||||||||  ||  ||||||||| ||| |||||||||||    
T  12820370 tttcgtggcactgcctaaaattgtgcaaagcaaactatcaatcacaccgcctccaggataaaacaagttcaggtacaactgtgcgactaactactgca 12820467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 17955884 - 17955789
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| | |||||||||||||| |||| |  || ||||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  17955884 tgagtcacgaccaggtcgctttttttaagacgtttcgcggcact-acctaaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 17955789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 409
Target Start/End: Complemental strand, 15951585 - 15951523
Alignment:
Q  346 ttatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||| |  ||||||||||||    
T  15951585 ttatcaaccacgccgcctccag-ataaaacaagcccagctacaactgtgcagttaactactgca 15951523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 292 - 386
Target Start/End: Original strand, 20072109 - 20072200
Alignment:
Q  292 aggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaacta 386  Q
    ||||||||||||||||||| ||||||| || | || |||||||||||||  ||||||||||||||| || ||||| |||||||| ||||||||||    
T  20072109 aggtcgctctctttaagacatttcgtgacatttcctaaaattgtgcaag-tagattatcaaccacgacgtctcca-gataaaac-agcccaacta 20072200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 260 - 341
Target Start/End: Original strand, 5883978 - 5884058
Alignment:
Q  260 caccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaaga 341  Q
    |||| ||||| ||||| ||||||||||||||||||| ||||| |||||||||||| |||| | || |||||||||| |||||    
T  5883978 caccaaagttattactgggttgagtcacgaccaggtagctct-tttaagacgttttgtggtagtgtccaaaattgtacaaga 5884058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 376
Target Start/End: Complemental strand, 21644172 - 21644081
Alignment:
Q  284 tcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  21644172 tcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgactccaggataaaaca 21644081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 277 - 377
Target Start/End: Complemental strand, 42157970 - 42157871
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||| ||| || |||||||||| ||| | |||| |  |||||||||| ||| | |||||||||| || |||| |||||||||||||||    
T  42157970 ggttgagtcacgaccaagtcactatctttaagacattttgcggcactatccaaaattgtacaa-atagattatcaatcatgccgtctccaggataaaaca 42157872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 42514469 - 42514374
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    ||||||| |||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  42514469 tgagtcatgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 42514374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 409
Target Start/End: Complemental strand, 43302714 - 43302658
Alignment:
Q  353 ccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    |||||||||||||||||||||||||||||| || || |||| || ||||||||||||    
T  43302714 ccacgccgcctccaggataaaacaagcccagctgcacctgtgcggttaactactgca 43302658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 302 - 393
Target Start/End: Original strand, 34517263 - 34517351
Alignment:
Q  302 ctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgt 393  Q
    |||||||||||||||||||| ||  ||||||||||||||  ||| ||||||||||| |||| ||| |||||||||| | |||||||||||||    
T  34517263 ctttaagacgtttcgtggcactg-tcaaaattgtgcaag-gagactatcaaccacgacgcccccaagataaaacaa-ctcaactacaactgt 34517351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 279 - 313
Target Start/End: Complemental strand, 15951618 - 15951584
Alignment:
Q  279 ttgagtcacgaccaggtcgctctctttaagacgtt 313  Q
    |||||||||||||||||||||||||||||||||||    
T  15951618 ttgagtcacgaccaggtcgctctctttaagacgtt 15951584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 374
Target Start/End: Original strand, 24884712 - 24884805
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaa 374  Q
    |||||||||||||||| ||| |||||||||||||| | |||| |  || || |||||||||  ||| || ||||||||||| |||||||||||||    
T  24884712 tgagtcacgaccaggtagctttctttaagacgttttgcggcact-acctaagttgtgcaaggtagactagcaaccacgccgtctccaggataaaa 24884805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 309 - 410
Target Start/End: Original strand, 27415539 - 27415640
Alignment:
Q  309 acgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgc 408  Q
    ||||||||||||| | || || ||||||  ||||  ||||||||||||| ||||| ||| |||||||||||  |||||||| ||| ||||||| || |||    
T  27415539 acgtttcgtggcactacctaagattgtggcagacgaattatcaaccacgtcgccttcagaataaaacaagcataactacaattgtgcgattaaatattgc 27415638  T
Q  409 at 410  Q
    ||    
T  27415639 at 27415640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 271 - 376
Target Start/End: Complemental strand, 43999334 - 43999230
Alignment:
Q  271 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggat 370  Q
    ||||| ||||||||||||| ||||||| | ||||||| |||||||| |||| |  || ||||||||||||  ||| || ||||  ||||| |||||||||    
T  43999334 ttactgggttgagtcacgatcaggtcgttttctttaaaacgtttcgcggcact-acctaaattgtgcaaggtagactagcaactgcgccgtctccaggat 43999236  T
Q  371 aaaaca 376  Q
    ||||||    
T  43999235 aaaaca 43999230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 215 - 277
Target Start/End: Complemental strand, 28565330 - 28565268
Alignment:
Q  215 ttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactag 277  Q
    |||||||| ||||| ||| |||||| ||||| ||||| ||||||| | |||||||||||||||    
T  28565330 ttggattttcaaactgttttatttgaatttctaaattatattatctatcgaagttgttactag 28565268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 215 - 277
Target Start/End: Complemental strand, 28572953 - 28572891
Alignment:
Q  215 ttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactag 277  Q
    |||||||| ||||| ||| |||||| ||||| ||||| ||||||| | |||||||||||||||    
T  28572953 ttggattttcaaactgttttatttgaatttctaaattatattatctatcgaagttgttactag 28572891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 272 - 310
Target Start/End: Complemental strand, 34818802 - 34818764
Alignment:
Q  272 tactaggttgagtcacgaccaggtcgctctctttaagac 310  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  34818802 tactgggttgagtcacgaccaggtcgctttctttaagac 34818764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 272 - 310
Target Start/End: Original strand, 37771703 - 37771741
Alignment:
Q  272 tactaggttgagtcacgaccaggtcgctctctttaagac 310  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  37771703 tactgggttgagtcacgaccaggtcgctttctttaagac 37771741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 321
Target Start/End: Original strand, 32010538 - 32010579
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggca 321  Q
    |||||||||||||||||||||| |||||||| ||||| ||||    
T  32010538 tgagtcacgaccaggtcgctctttttaagacatttcgcggca 32010579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 207 - 243
Target Start/End: Complemental strand, 15951659 - 15951623
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatt 243  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  15951659 tgttgtttttgtatttccaaactgttgtatttggatt 15951623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 40126032 - 40126000
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttg 239  Q
    |||||||||||||||||||||| ||||||||||    
T  40126032 tgttgtttttggatttccaaactgttgtatttg 40126000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 158; Significance: 8e-84; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 212 - 409
Target Start/End: Original strand, 4930164 - 4930361
Alignment:
Q  212 tttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 311  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4930164 tttttgaatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacg 4930263  T
Q  312 tttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    |||||||||| |||||||||||||| ||| || | ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  4930264 tttcgtggcactgcccaaaattgtgtaagtcatactatcaaccacgccgcctccaggataaaacaagcccaactacaactgtgcggttaactactgca 4930361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 207 - 409
Target Start/End: Original strand, 8268219 - 8268421
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||    
T  8268219 tgttgtttttggatttccaaactgttgtatttgcatttccaaattctattatctaccgaagttgttactatattgagtcacgaccaggtcgctctcttta 8268318  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    |||||||| |||||| || |||||||||||||||||||| ||||||||||||| |||||| ||||||||||| ||| |||||||||||||||||||||||    
T  8268319 agacgttttgtggcactgtccaaaattgtgcaagacagactatcaaccacgccacctccatgataaaacaagtccagctacaactgttcgattaactact 8268418  T
Q  407 gca 409  Q
    |||    
T  8268419 gca 8268421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 218 - 406
Target Start/End: Original strand, 26341136 - 26341324
Alignment:
Q  218 gatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgt 317  Q
    ||||| ||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26341136 gattttcaaactgttgtatttggatttccaaaatctattatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacatttcgt 26341235  T
Q  318 ggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    |||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  26341236 ggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagtccagctacaactgttcgattaactact 26341324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 207 - 407
Target Start/End: Original strand, 8075975 - 8076176
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtattt-ggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 305  Q
    |||||||||||||||||||||| ||||||||| || |||||||||||||||||| || |||||||||||| |||||||||||||||||||||||||||||    
T  8075975 tgttgtttttggatttccaaactgttgtattttggttttccaaattctattatctactgaagttgttactgggttgagtcacgaccaggtcgctctcttt 8076074  T
Q  306 aagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactac 405  Q
    |||||||||||||||| |||| |||||||||||||||||| |||||||||||| |||||||||||||||||||| || || ||||||| |||||||||||    
T  8076075 aagacgtttcgtggcactgcctaaaattgtgcaagacagactatcaaccacgctgcctccaggataaaacaagctcagctgcaactgtgcgattaactac 8076174  T
Q  406 tg 407  Q
    ||    
T  8076175 tg 8076176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 209 - 409
Target Start/End: Complemental strand, 13314403 - 13314203
Alignment:
Q  209 ttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaag 308  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||| ||||||||||||||    
T  13314403 ttgtttttgggtttccaaactgttgtatttggatttccaaattctactatctaccgtagttgttactaggttgagtcacgaccagatcgctctctttaag 13314304  T
Q  309 acgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgc 408  Q
    ||||||||||| | ||||||||||||||||||  ||| ||||| ||||| ||||||||||||||||||||| || |||||||||||| ||||||||||||    
T  13314303 acgtttcgtggtactgcccaaaattgtgcaaggtagactatcagccacgtcgcctccaggataaaacaagctcagctacaactgttcaattaactactgc 13314204  T
Q  409 a 409  Q
    |    
T  13314203 a 13314203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 207 - 378
Target Start/End: Complemental strand, 9651137 - 9650965
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtattt-ggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 305  Q
    |||||||||||||||| ||||| ||||||||| || |||||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||    
T  9651137 tgttgtttttggattttcaaactgttgtattttggttttccaaattctgttttctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 9651038  T
Q  306 aagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaag 378  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  9651037 aagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaag 9650965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 44423307 - 44423104
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttcc-aaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 305  Q
    |||||||||||||||| ||||| ||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||| ||| |||||||||||    
T  44423307 tgttgtttttggattttcaaactgttgtatttggatttcccaaattctattatctaccaaagttgttactaggttgagtcacgatcagatcgctctcttt 44423208  T
Q  306 aagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactac 405  Q
    |||||||||||||||| || |||||||||| |||| |||| ||||||| |||||||||||||||||||||||| ||| |||||||||| || ||||||||    
T  44423207 aagacgtttcgtggcactgaccaaaattgttcaaggcagactatcaactacgccgcctccaggataaaacaagtccatctacaactgtgcggttaactac 44423108  T
Q  406 tgca 409  Q
    ||||    
T  44423107 tgca 44423104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 263 - 409
Target Start/End: Original strand, 4579490 - 4579636
Alignment:
Q  263 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcc 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||    
T  4579490 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcc 4579589  T
Q  363 tccaggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    |||||||||||||||| ||| |||||||||| |||||||||||||||    
T  4579590 tccaggataaaacaagtccagctacaactgtgcgattaactactgca 4579636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 230 - 409
Target Start/End: Complemental strand, 44510823 - 44510644
Alignment:
Q  230 gttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaa 329  Q
    ||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||| || ||||    
T  44510823 gttgtttttgtatttccaaattctattatctaccgaagttgttactaggttgagtcacgaccagattgctctctttaagacgttttgtggcactgtccaa 44510724  T
Q  330 aattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| || || ||||||| || |||||| |||||    
T  44510723 aattgtgcaagacagactatcaaccacgccgcctccaggataaaacaagctcagctgcaactgtgcggttaacttctgca 44510644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 407 - 539
Target Start/End: Original strand, 12802955 - 12803087
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatac 506  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||    
T  12802955 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcatcaaatgattgactaattctttatcagtacgtgcacgatatac 12803054  T
Q  507 tttaaccgttccttttagagctctctaattatt 539  Q
    |||||||||||||||||||| ||||||||||||    
T  12803055 tttaaccgttccttttagagatctctaattatt 12803087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 261 - 407
Target Start/End: Complemental strand, 23247048 - 23246902
Alignment:
Q  261 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccg 360  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||| ||||||||||||||    
T  23247048 accgaagttgttactagattgagtcacgaccaggtcgctctctttaagatgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccg 23246949  T
Q  361 cctccaggataaaacaagcccaactacaactgttcgattaactactg 407  Q
    ||||||||||||||||||| || |||||||||| |||||||||||||    
T  23246948 cctccaggataaaacaagctcacctacaactgtgcgattaactactg 23246902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 278 - 409
Target Start/End: Original strand, 23866065 - 23866196
Alignment:
Q  278 gttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaa 377  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23866065 gttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaa 23866164  T
Q  378 gcccaactacaactgttcgattaactactgca 409  Q
    || || || ||||||| || ||||||||||||    
T  23866165 gctcagctgcaactgtgcggttaactactgca 23866196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 204 - 409
Target Start/End: Original strand, 27238164 - 27238370
Alignment:
Q  204 ttctgttgtttttggatttccaaacagttgtatttggatttc-caaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctc 302  Q
    ||||| || ||||||||||| ||||  ||||||||||||||  |||| ||||||||| |  |||||||||||||||||||||||||||||||||||||||    
T  27238164 ttctgatgattttggatttctaaactattgtatttggatttttcaaactctattatctatggaagttgttactaggttgagtcacgaccaggtcgctctc 27238263  T
Q  303 tttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaac 402  Q
    |||||||||||| |||||| ||| |||||||||| ||| |||| |||||| |||||||||| || ||||||||||| ||| |||||||||   | |||||    
T  27238264 tttaagacgttttgtggcactgctcaaaattgtgtaaggcagactatcaatcacgccgcctgcaagataaaacaagtccagctacaactgcgtgcttaac 27238363  T
Q  403 tactgca 409  Q
    |||||||    
T  27238364 tactgca 27238370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 210 - 359
Target Start/End: Complemental strand, 42627364 - 42627214
Alignment:
Q  210 tgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttact-aggttgagtcacgaccaggtcgctctctttaag 308  Q
    |||||||| |||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  42627364 tgtttttgaatttccaaactgttgtatttgaatttccaaattctattatctaccgaagttgttacttaggttgattcacgaccaggtcgctctctttaag 42627265  T
Q  309 acgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgcc 359  Q
    |||||||||||||   |||||||||||||||  |||| |||||||||||||    
T  42627264 acgtttcgtggcacaacccaaaattgtgcaaagcagactatcaaccacgcc 42627214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 10388546 - 10388334
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctatt------------atccaccgaagttgttactaggttgagtcacgaccagg 294  Q
    |||||||||| ||||| ||| | |||||||||||||||||||||||||||            ||| ||||||||||||||||||||||||||||||||||    
T  10388546 tgttgtttttagattttcaagctgttgtatttggatttccaaattctattttgaaaaagaatatctaccgaagttgttactaggttgagtcacgaccagg 10388447  T
Q  295 tcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgtt 394  Q
    |||||||||||||||||||| |||||| ||||| || ||||||| || |||  |||||| ||||||||||||||||||||||| | |||||||||||||     
T  10388446 tcgctctctttaagacgttttgtggcattgccc-aagttgtgcatgataga-catcaacaacgccgcctccaggataaaacaaactcaactacaactgtg 10388349  T
Q  395 cgattaactactgca 409  Q
    |||||||||||||||    
T  10388348 cgattaactactgca 10388334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 263 - 409
Target Start/End: Complemental strand, 25543475 - 25543329
Alignment:
Q  263 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcc 362  Q
    ||||||||||||||||||||||||| | |||||||| |||||||||||||||||||| | |||| |||||||||||||| | | ||||||||||  ||||    
T  25543475 cgaagttgttactaggttgagtcacaatcaggtcgcactctttaagacgtttcgtggtactgcctaaaattgtgcaagataaactatcaaccacatcgcc 25543376  T
Q  363 tccaggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    |||||||||||||||| | | |||||||||| || ||||||||||||    
T  25543375 tccaggataaaacaagtctagctacaactgtgcggttaactactgca 25543329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 207 - 339
Target Start/End: Original strand, 30256780 - 30256912
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    ||||||||||||||||  ||||  |||||||||||||| |||||||||||||| ||||||||| |||| |||||||||||||||||| ||||| | ||||    
T  30256780 tgttgtttttggatttataaactattgtatttggatttgcaaattctattatctaccgaagtttttacaaggttgagtcacgaccagatcgctgttttta 30256879  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaa 339  Q
    |||| |||||||||| |||||||||||||||||    
T  30256880 agacatttcgtggcactgcccaaaattgtgcaa 30256912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 256 - 374
Target Start/End: Complemental strand, 3357752 - 3357634
Alignment:
Q  256 tatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaacca 355  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |  ||||||| ||||||||| |||| |||||||||    
T  3357752 tatctaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgcggtacagcccaaagttgtgcaaggcagactatcaacca 3357653  T
Q  356 cgccgcctccaggataaaa 374  Q
    ||||| ||||| |||||||    
T  3357652 cgccgtctccatgataaaa 3357634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 263 - 404
Target Start/End: Original strand, 12254061 - 12254202
Alignment:
Q  263 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcc 362  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||| |||| |||||| |||| ||| ||||||||| |||| |||||| |||||||||    
T  12254061 cgaagttgttaccaggttgagtcgcgaccaggtcgctctctttaagatgttttgtggcactgcctaaagttgtgcaaggcagactatcaatcacgccgcc 12254160  T
Q  363 tccaggataaaacaagcccaactacaactgttcgattaacta 404  Q
    | ||||||||||||||  || |||||||||| || |||||||    
T  12254161 tacaggataaaacaagttcagctacaactgtgcggttaacta 12254202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 207 - 409
Target Start/End: Original strand, 21671109 - 21671323
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctatt------------atccaccgaagttgttactaggttgagtcacgaccagg 294  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||            |||  | ||||||||||||||||||||||||||| |||    
T  21671109 tgttgtttttggatttccaaacaattttatttggatttccaaattctattttgaaatagaatatctgctgaagttgttactaggttgagtcacgactagg 21671208  T
Q  295 tcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgtt 394  Q
     | |||||||||||| |||| |||||| |||||||| ||||||||| ||||  |||||| ||  ||| ||||| ||||||||||| || ||||||||||     
T  21671209 accctctctttaagaagtttagtggcactgcccaaagttgtgcaaggcagacaatcaacaacttcgcatccagaataaaacaagctcacctacaactgtg 21671308  T
Q  395 cgattaactactgca 409  Q
    || ||||||||||||    
T  21671309 cggttaactactgca 21671323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 265 - 409
Target Start/End: Original strand, 9008147 - 9008291
Alignment:
Q  265 aagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctc 364  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||| ||| || | | |||||||||||||| |||  |||||| || |  |||||    
T  9008147 aagttgttactaggttgagtcacgaccatgtccctctctttaagacgtttagtgacactactcaaaattgtgcaaggcaggctatcaatcatgaagcctc 9008246  T
Q  365 caggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    |||||||||||||| ||||||||||||||  ||||||||||||||    
T  9008247 caggataaaacaagtccaactacaactgtgtgattaactactgca 9008291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 207 - 409
Target Start/End: Original strand, 3879922 - 3880123
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactagg-ttgagtcacgaccaggtcgctctcttt 305  Q
    ||||||| ||||||||  |||  ||||||||| ||||||||||||||||| ||||||||| ||||||||||| ||||||||||| |||||| || |||||    
T  3879922 tgttgttcttggatttttaaattgttgtattttgatttccaaattctattttccaccgaatttgttactaggtttgagtcacgatcaggtcactttcttt 3880021  T
Q  306 aagacgtttcgtggcaatgcccaaaa-ttgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaacta 404  Q
    ||||||||| ||| || ||  ||||| ||||| |||  ||| ||||||||||||||||||||||||||   |||||| ||||||||| |  | |||||||    
T  3880022 aagacgttttgtgacactgttcaaaatttgtgtaaggaagactatcaaccacgccgcctccaggataa---aagccccactacaactatgtggttaacta 3880118  T
Q  405 ctgca 409  Q
    |||||    
T  3880119 ctgca 3880123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 261 - 391
Target Start/End: Original strand, 29150914 - 29151044
Alignment:
Q  261 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccg 360  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| || ||| |||||||||||||| || | ||||||||||| ||    
T  29150914 accgaagttgttactaggttgagtcacgaccagatcgctctttttaagacgtttcgtgacactgctcaaaattgtgcaaggcaaactatcaaccacgtcg 29151013  T
Q  361 cctccaggataaaacaagcccaactacaact 391  Q
    |||||| ||||||| |||  || ||||||||    
T  29151014 cctccaagataaaataagttcagctacaact 29151044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 207 - 409
Target Start/End: Complemental strand, 26287339 - 26287112
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattat------------ccaccgaagttgttactaggttgagtcacgaccagg 294  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||| |            | |||||||||||||||||||||||||||||||| |    
T  26287339 tgttgtttttggatttcaaaactgttgtatttggatttccaaattctattttgaaaaataatctctaccgaagttgttactaggttgagtcacgaccatg 26287240  T
Q  295 tcgctctctttaagacgtttcgtggcaatgcccaaaattgtg-------------caagacagattatcaaccacgccgcctccaggataaaacaagccc 381  Q
     |||| ||||||||| ||||  ||||| || |||||||||||             |||  |||| |||||||||||||||||||||||||||||||  ||    
T  26287239 ccgctttctttaagatgttttttggcattgtccaaaattgtgtaaggcagactatcaacgcagactatcaaccacgccgcctccaggataaaacaaatcc 26287140  T
Q  382 aactacaactgttcgattaactactgca 409  Q
    | |||||||||| |  ||||||||||||    
T  26287139 agctacaactgtgcagttaactactgca 26287112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 264 - 378
Target Start/End: Original strand, 16372381 - 16372491
Alignment:
Q  264 gaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcct 363  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |  |||| || |||||||||||| |||||   ||| |||||    
T  16372381 gaagttgttactaggttgagtcacgaccaagtcgctctctttaagatgtttcgtggcact-accaagatcgtgcaagacagactatca---acgtcgcct 16372476  T
Q  364 ccaggataaaacaag 378  Q
    ||| |||||||||||    
T  16372477 ccaagataaaacaag 16372491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 277 - 376
Target Start/End: Original strand, 24528351 - 24528449
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||||||||||||||||||||| | |||| | ||| || |||||||||  ||| || ||||||||||| |||||||||||||||    
T  24528351 ggttgagtcacgaccaggtcgctctctttaagacgttttgcggcattaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 24528449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 411 - 520
Target Start/End: Original strand, 2596444 - 2596553
Alignment:
Q  411 tagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatacttta 510  Q
    ||||| ||||||||||||||| |||| ||||||||||||  ||||||||||| |||||||||||| |||||||| || | |  || |  |||||||||||    
T  2596444 tagtcccatcctattggatgtttttaagactttctttctgataattcctttcatcaaaggattgactaattcttcattaattagtacgtgatatacttta 2596543  T
Q  511 accgttcctt 520  Q
    ||||||||||    
T  2596544 accgttcctt 2596553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 326 - 411
Target Start/End: Original strand, 12799455 - 12799540
Alignment:
Q  326 ccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgcatt 411  Q
    ||||||||||||||| |||| ||||||||||||| | |||||||||||| ||| ||| |||||||||| || ||||||||||||||    
T  12799455 ccaaaattgtgcaaggcagactatcaaccacgccacatccaggataaaataagtccagctacaactgtgcggttaactactgcatt 12799540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 256 - 409
Target Start/End: Original strand, 15642209 - 15642362
Alignment:
Q  256 tatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaacca 355  Q
    |||| ||||||||||||||    ||| ||||||| ||||||||||| ||||||||||||| || || |  ||||||||||| |||||| | ||||||| |    
T  15642209 tatctaccgaagttgttacagaattgtgtcacgatcaggtcgctctttttaagacgtttcatgacactatccaaaattgtggaagacaaactatcaacta 15642308  T
Q  356 cgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    || ||||||||||| |||||| || || ||||||| |  || ||||||||||||    
T  15642309 cgtcgcctccaggacaaaacaggctcagctacaacggcacggttaactactgca 15642362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 305 - 411
Target Start/End: Complemental strand, 6591054 - 6590948
Alignment:
Q  305 taagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaacta 404  Q
    |||||||||| |||||| || | ||||||||||||| |||| ||||||||||||||||| ||||||||||||||  ||  || ||||||  |||||||||    
T  6591054 taagacgttttgtggcactgtctaaaattgtgcaaggcagactatcaaccacgccgccttcaggataaaacaagttcagttataactgtgtgattaacta 6590955  T
Q  405 ctgcatt 411  Q
    || ||||    
T  6590954 ctacatt 6590948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 277 - 377
Target Start/End: Original strand, 9973459 - 9973558
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    ||||||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  |||  | ||||||||||| |||||||||||||||    
T  9973459 ggttgagtcacgaccaggtcgctttctttaagacgtttcgcggcactatcc-aagttgtgcaaggtagacgaacaaccacgccgtctccaggataaaaca 9973557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 33238002 - 33238097
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  33238002 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 33238097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 47998975 - 47999070
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  47998975 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 47999070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 355
Target Start/End: Complemental strand, 29478236 - 29478176
Alignment:
Q  294 gtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaacca 355  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||| ||||| |||||||||    
T  29478236 gtcgctctcttcaagacgtttcgtggcactgcccaaaattgtgcaa-acagactatcaacca 29478176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 2234725 - 2234630
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||| ||| |||||||||||||||| |||| |  || ||||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  2234725 tgagtcacgaccaggttgctttctttaagacgtttcgcggcact-acctaaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 2234630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 16539507 - 16539412
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  16539507 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 16539412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 16626155 - 16626250
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  16626155 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 16626250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 32212749 - 32212654
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || ||||||||||||  ||| || ||||| ||| | |||||||||||||||    
T  32212749 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaaattgtgcaaggtagactagcaaccgcgctgtctccaggataaaaca 32212654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 33243179 - 33243274
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    ||||||||||||||||| ||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  33243179 tgagtcacgaccaggtcactctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 33243274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 42571945 - 42572040
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  42571945 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 42572040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 47993800 - 47993895
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||| |||||||||||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  47993800 tgagtcacaaccaggtcgctctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 47993895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 347 - 409
Target Start/End: Original strand, 30258166 - 30258228
Alignment:
Q  347 tatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||| || || ||||||||||||    
T  30258166 tatcaatcacgccgcctccaggataaaacaagtccagctacaacagtgcggttaactactgca 30258228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 282 - 376
Target Start/End: Original strand, 33226416 - 33226509
Alignment:
Q  282 agtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    ||||||||||||||||||||||||||||||||||| |||| |  || || || ||||||  ||| || ||||||||||| | |||||||||||||    
T  33226416 agtcacgaccaggtcgctctctttaagacgtttcgcggcact-acctaagttatgcaaggtagactaacaaccacgccgtcaccaggataaaaca 33226509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 407 - 522
Target Start/End: Complemental strand, 10391516 - 10391404
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatac 506  Q
    |||| |||| ||||||||||||||||||||  ||||||||   ||| |||||||||||||||||||  | || ||||| |||||||| | || ||| | |    
T  10391516 gcatcagtctcatcctattggatgtgtttagaactttctt---agttattcctttcgtcaaaggatcaattagttcttcatcagtacatacatgatcttc 10391420  T
Q  507 tttaaccgttcctttt 522  Q
    |||||| |||||||||    
T  10391419 tttaactgttcctttt 10391404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 393
Target Start/End: Complemental strand, 13142973 - 13142884
Alignment:
Q  304 ttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgt 393  Q
    |||||||||||||||||| |   |||| ||||||| |||||| | ||||| |||||||| |||||||||||||||  || ||||||||||    
T  13142973 ttaagacgtttcgtggcactagtcaaagttgtgcatgacagactttcaacaacgccgccaccaggataaaacaagttcagctacaactgt 13142884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 21081136 - 21081039
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaat-tgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| |||||||||||||||| |||| | || ||| | ||||||||  ||| || ||||| | ||| |||||||||||||||    
T  21081136 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaaattgtgtgcaaggtagactagcaaccgcaccgtctccaggataaaaca 21081039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 277 - 373
Target Start/End: Complemental strand, 28292600 - 28292506
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaa 373  Q
    |||| |||||||||||||||||||| |||||||||||||| |||| |  ||||  |||||||||  ||| || ||||||||||| ||||||||||||    
T  28292600 ggttaagtcacgaccaggtcgctct-tttaagacgtttcgcggcactatccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaa 28292506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 47177214 - 47177119
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| || ||||||||||||    
T  47177214 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtcttcaggataaaaca 47177119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 271 - 373
Target Start/End: Complemental strand, 6898461 - 6898359
Alignment:
Q  271 ttactaggttgagtcacg-accaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccagga 369  Q
    |||||||| |||||| || || || ||||||||||||||| |||| |||||| || ||||||||||||||| |||| ||||||||||  || | ||||||    
T  6898461 ttactaggctgagtcgcggactagatcgctctctttaagatgttttgtggcactgtccaaaattgtgcaag-cagactatcaaccacaacgtccccagga 6898363  T
Q  370 taaa 373  Q
    ||||    
T  6898362 taaa 6898359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 374
Target Start/End: Original strand, 3284740 - 3284820
Alignment:
Q  294 gtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaa 374  Q
    |||||||||||||||| ||||||||  | ||  |||| |||||||||||||| |||||||||| ||| || || |||||||    
T  3284740 gtcgctctctttaagatgtttcgtgctactgttcaaacttgtgcaagacagactatcaaccacaccgtcttcatgataaaa 3284820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 12934397 - 12934492
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| |||||||||| ||||| |||| |  ||  | |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  12934397 tgagtcacgaccaggtcgctttctttaagacatttcgcggcact-acctgagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 12934492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 17495403 - 17495498
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| | |||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| ||||| |||||||||    
T  17495403 tgagtcacgaccaggtcgctttttttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaagataaaaca 17495498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 17557811 - 17557716
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| | |||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| ||||| |||||||||    
T  17557811 tgagtcacgaccaggtcgctttttttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaagataaaaca 17557716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 43892858 - 43892953
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| |||||||||||||||  |||| |  || || |||||||||  | | || ||||| ||||| |||||||||||||||    
T  43892858 tgagtcacgaccaggtcgctttctttaagacgtttcacggcact-acctaagttgtgcaaggtaaactagcaaccgcgccgtctccaggataaaaca 43892953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 375
Target Start/End: Complemental strand, 1289416 - 1289334
Alignment:
Q  292 aggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaac 375  Q
    ||||||||||||||||||||||| ||| || | | ||||||| |||||| |||| ||||||||||  ||||| || ||||||||    
T  1289416 aggtcgctctctttaagacgttttgtgacactactcaaaattatgcaag-cagactatcaaccacaacgccttcaagataaaac 1289334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 407 - 449
Target Start/End: Original strand, 15976804 - 15976846
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttct 449  Q
    ||||||||| ||| |||||||||||||||| ||||||||||||    
T  15976804 gcattagtctcattctattggatgtgtttaagactttctttct 15976846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 321
Target Start/End: Complemental strand, 22857782 - 22857741
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggca 321  Q
    |||||||||| ||||||||| |||||||||||||||| ||||    
T  22857782 tgagtcacgatcaggtcgctttctttaagacgtttcgcggca 22857741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 310
Target Start/End: Original strand, 27256239 - 27256272
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagac 310  Q
    ||||||||||||||||||||||| ||||||||||    
T  27256239 ggttgagtcacgaccaggtcgctttctttaagac 27256272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 259 - 315
Target Start/End: Complemental strand, 7875214 - 7875158
Alignment:
Q  259 ccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttc 315  Q
    ||||||||| | |||| ||||||||| | || ||||||||| |||||||||||||||    
T  7875214 ccaccgaagatattaccaggttgagtaatgatcaggtcgctttctttaagacgtttc 7875158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 149; Significance: 2e-78; HSPs: 66)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 202 - 409
Target Start/End: Complemental strand, 2700281 - 2700073
Alignment:
Q  202 agttctgttgtttttggatttccaaacagtt-gtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctc 300  Q
    |||| ||||||||||| |||| ||||| ||| |||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||    
T  2700281 agttttgttgtttttgaattttcaaaccgttagtatttggattttcaaattctactatctaccgaagttgttactaggttgagtcacgaccagatcgctc 2700182  T
Q  301 tctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgatta 400  Q
    ||||||||||||||||||||| ||  ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2700181 tctttaagacgtttcgtggcactgttcaaaattgtgcaagacagactatcaaccacgccgcttccaggataaaacaagcccaactacaactgttcgatta 2700082  T
Q  401 actactgca 409  Q
    |||||||||    
T  2700081 actactgca 2700073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 207 - 406
Target Start/End: Complemental strand, 6408029 - 6407830
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |    
T  6408029 tgttgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgttactaggttgagtcacgatcaggtcgctctcttga 6407930  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||||||||| ||||||||||||| |||  |||| ||||||||||||||||||||||||||||||||| || |||||||||| || |||||||||    
T  6407929 agacgtttcgtggcactgcccaaaattgtacaaagcagactatcaaccacgccgcctccaggataaaacaagctcagctacaactgtgcggttaactact 6407830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 209 - 406
Target Start/End: Original strand, 12688899 - 12689096
Alignment:
Q  209 ttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaag 308  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  12688899 ttgtttttggattttcaaactgttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcatgaccaggtcactctctttaag 12688998  T
Q  309 acgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    |||||| |||  | |||||||||||||||||| |||| |||||||||||||| |||||||||||||||||| || |||||||||| || |||||||||    
T  12688999 acgttttgtgatactgcccaaaattgtgcaaggcagactatcaaccacgccgtctccaggataaaacaagctcagctacaactgtgcggttaactact 12689096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 219 - 406
Target Start/End: Complemental strand, 11570906 - 11570719
Alignment:
Q  219 atttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtg 318  Q
    |||| ||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11570906 attttcaaactgttgtatttggatttcgaaattctattatctaccgaagttgttactaggttgagtcacaaccaggtcgctctctttaagacgtttcgtg 11570807  T
Q  319 gcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||| |||||||||||||||||| ||||  |||||||||||||||||||||||||||||||| || |||||||||| || | |||||||    
T  11570806 gcactgcccaaaattgtgcaaggcagacaatcaaccacgccgcctccaggataaaacaagctcagctacaactgtgcggtgaactact 11570719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 207 - 409
Target Start/End: Original strand, 8747708 - 8747910
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  8747708 tgttgtttttggatttacaaactgttgtatttggatttccaaattctattatctattgaagttgttactaggttgagtcacgaccaggtcgctctcttta 8747807  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||| |||| || ||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||| || || ||||| |  | |||||||||    
T  8747808 agacgttccgtgacactgcccaaaattgtgcaagacaggctatcaacaacgccgcctccaggataaaacaagctcagctgcaactatgtggttaactact 8747907  T
Q  407 gca 409  Q
    |||    
T  8747908 gca 8747910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 206 - 411
Target Start/End: Complemental strand, 33687773 - 33687568
Alignment:
Q  206 ctgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 305  Q
    ||||||||||||||||||||||| |||||||||||||||  ||||| | ||||| |||||| |||||| |||||||||| || |||||||||||||||||    
T  33687773 ctgttgtttttggatttccaaactgttgtatttggatttttaaattttgttatctaccgaaattgttattaggttgagttaccaccaggtcgctctcttt 33687674  T
Q  306 aagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactac 405  Q
    |||||||||||||||| || |||||||||||||||||||| ||||||||| |||| |||||||||||||||| | ||||||||||||| || ||||||||    
T  33687673 aagacgtttcgtggcactggccaaaattgtgcaagacagactatcaaccatgccgtctccaggataaaacaaactcaactacaactgtgcggttaactac 33687574  T
Q  406 tgcatt 411  Q
    ||||||    
T  33687573 tgcatt 33687568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 207 - 409
Target Start/End: Original strand, 21308960 - 21309159
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||||||||||||| |||||   |||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||  ||||||||||||    
T  21308960 tgttgtttttggattttcaaac---tgtatttggatttccaaattctattatctatcgaagttgttactaggttgagtcactaccatatcgctctcttta 21309056  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||||| ||||| |||||||||||||||||  |||| ||||||||||||||||||||||||||||||||| || |||||||||| || |||||||||    
T  21309057 agacgtttcatggcactgcccaaaattgtgcaatgcagactatcaaccacgccgcctccaggataaaacaagctcagctacaactgtgcggttaactact 21309156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 407 - 544
Target Start/End: Complemental strand, 16834583 - 16834446
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatac 506  Q
    ||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  16834583 gcattagtcccatcctattggatgtgtttaggactttctttctagcaattcctttcgtcaaaggattgactaattctttatcagtacgtgcacgatatac 16834484  T
Q  507 tttaaccgttccttttagagctctctaattattctgtg 544  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  16834483 tttaaccgttccttttagagctctctaatcattctgtg 16834446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 206 - 353
Target Start/End: Original strand, 19674238 - 19674385
Alignment:
Q  206 ctgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 305  Q
    ||||||||||||||||| ||||| ||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||    
T  19674238 ctgttgtttttggattttcaaactgttgtatttggattttcaaattctattatttaccgaagttgttactaggttgagtcacgaccaggtcactctcttt 19674337  T
Q  306 aagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaac 353  Q
    |||||||||| ||||| ||||||||||||||||||||||| |||||||    
T  19674338 aagacgtttcatggcactgcccaaaattgtgcaagacagactatcaac 19674385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 230 - 411
Target Start/End: Original strand, 14508933 - 14509114
Alignment:
Q  230 gttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaa 329  Q
    ||||| ||| ||||| |||||||||||||| ||| ||||||||| |||| ||| | | || || ||||||||||| ||||||||||||| || ||  |||    
T  14508933 gttgtctttagattttcaaattctattatctaccaaagttgttattaggatgatttatgatcatgtcgctctcttcaagacgtttcgtgtcactgttcaa 14509032  T
Q  330 aattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgcatt 411  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||| || ||||||||||||||||||||||||||||    
T  14509033 aattgtgcaagacagattatcaaccacgccgcttccaagataaaacaagctcatctacaactgttcgattaactactgcatt 14509114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 263 - 411
Target Start/End: Complemental strand, 24589277 - 24589129
Alignment:
Q  263 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcc 362  Q
    |||||||||||||| |||||||||||| ||| ||||||||||||| |||||||||| || |  |||||||||||||||| ||| |||||||||||||| |    
T  24589277 cgaagttgttactaagttgagtcacgatcagatcgctctctttaaaacgtttcgtgacactttccaaaattgtgcaagatagactatcaaccacgccgtc 24589178  T
Q  363 tccaggataaaacaagcccaactacaactgttcgattaactactgcatt 411  Q
    |||||||||||||||| |||||||||||||| || ||||||||||||||    
T  24589177 tccaggataaaacaagtccaactacaactgtgcggttaactactgcatt 24589129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 206 - 318
Target Start/End: Complemental strand, 11534848 - 11534736
Alignment:
Q  206 ctgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 305  Q
    ||||||||||||||||| ||||| |||||||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||    
T  11534848 ctgttgtttttggattttcaaactgttgtatttggatttcgaaattctattatctactgaagttgttactaggttgagtcaagaccaggtcgctctcttt 11534749  T
Q  306 aagacgtttcgtg 318  Q
    |||||||||||||    
T  11534748 aagacgtttcgtg 11534736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 206 - 318
Target Start/End: Complemental strand, 11560358 - 11560246
Alignment:
Q  206 ctgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 305  Q
    ||||||||||||||||| ||||| |||||||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||    
T  11560358 ctgttgtttttggattttcaaactgttgtatttggatttcgaaattctattatctactgaagttgttactaggttgagtcaagaccaggtcgctctcttt 11560259  T
Q  306 aagacgtttcgtg 318  Q
    |||||||||||||    
T  11560258 aagacgtttcgtg 11560246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 263 - 411
Target Start/End: Complemental strand, 29892374 - 29892226
Alignment:
Q  263 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcc 362  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||| |||| |||||| ||||||||||||||||||||| | |||||||||| || ||    
T  29892374 cgaagttgttactaggttgagtcacggtcaggtcgctctctttaagaagtttggtggcactgcccaaaattgtgcaagacaaactatcaaccacacctcc 29892275  T
Q  363 tccaggataaaacaagcccaactacaactgttcgattaactactgcatt 411  Q
    |||||||||||||||| ||| ||||||||||  | ||||||| ||||||    
T  29892274 tccaggataaaacaagtccagctacaactgtgtggttaactattgcatt 29892226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 213 - 345
Target Start/End: Original strand, 11427975 - 11428108
Alignment:
Q  213 ttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgt 312  Q
    ||||||||||||||||  |||||||||||||| |||||| ||||||  ||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  11427975 ttttggatttccaaactattgtatttggattttcaaattttattatttaccgaagttgttattagattgagtcacgaccaggtcgctctctttaagacgt 11428074  T
Q  313 ttcgtggcaatgcccaaaa-ttgtgcaagacaga 345  Q
    ||||||||| ||||||||| ||||||||| ||||    
T  11428075 ttcgtggcactgcccaaaagttgtgcaaggcaga 11428108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 261 - 409
Target Start/End: Complemental strand, 12406468 - 12406320
Alignment:
Q  261 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccg 360  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||| ||| |||||||||  ||| |||||| |||||||    
T  12406468 accgaagttgttactagattgagtcacgaccaggtcgctctcttaaagacgtttcgtggcagtgcctaaagttgtgcaaggaagactatcaatcacgccg 12406369  T
Q  361 cctccaggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    ||| || ||||||||| || |||||||||||||  | ||||||||||||    
T  12406368 ccttcatgataaaacatgctcaactacaactgtgtggttaactactgca 12406320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 265 - 409
Target Start/End: Complemental strand, 20748395 - 20748251
Alignment:
Q  265 aagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctc 364  Q
    |||||||||||||||||||||||||||||||||| |||||||| | ||||| ||| | || ||||||||||||||| | || ||||||||||||||||||    
T  20748395 aagttgttactaggttgagtcacgaccaggtcgccctctttaacatgtttcatggtactgtccaaaattgtgcaaggccgactatcaaccacgccgcctc 20748296  T
Q  365 caggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    ||| |||||||||| ||| |||||||||| || ||||||||||||    
T  20748295 cagaataaaacaagtccatctacaactgtgcggttaactactgca 20748251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 207 - 404
Target Start/End: Complemental strand, 25316739 - 25316535
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattc----tattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctc 302  Q
    ||||||||||| ||||||||||  || |||||||||||||||||||    ||||||| |||||| |||||||||| ||||||| ||||||||||||||      
T  25316739 tgttgtttttgaatttccaaactattatatttggatttccaaattcattctattatctaccgaaattgttactagattgagtcgcgaccaggtcgctcaa 25316640  T
Q  303 tttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgc---ctccaggataaaacaagcccaactacaactgttcgatt 399  Q
    |||||||||||| |||||| |||||||||||||||||  || | ||| |||||||||||   |||||||||||||||||  || ||||||| || || ||    
T  25316639 tttaagacgttttgtggcactgcccaaaattgtgcaaagcaaactatgaaccacgccgccgtctccaggataaaacaagttcatctacaaccgtgcggtt 25316540  T
Q  400 aacta 404  Q
    |||||    
T  25316539 aacta 25316535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 207 - 404
Target Start/End: Complemental strand, 26204233 - 26204029
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattc----tattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctc 302  Q
    ||||||||||| ||||||||||  || |||||||||||||||||||    ||||||| |||||| |||||||||| ||||||| ||||||||||||||      
T  26204233 tgttgtttttgaatttccaaactattatatttggatttccaaattcattctattatctaccgaaattgttactagattgagtcgcgaccaggtcgctcaa 26204134  T
Q  303 tttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgc---ctccaggataaaacaagcccaactacaactgttcgatt 399  Q
    |||||||||||| |||||| |||||||||||||||||  || | ||| |||||||||||   |||||||||||||||||  || ||||||| || || ||    
T  26204133 tttaagacgttttgtggcactgcccaaaattgtgcaaagcaaactatgaaccacgccgccgtctccaggataaaacaagttcatctacaaccgtgcggtt 26204034  T
Q  400 aacta 404  Q
    |||||    
T  26204033 aacta 26204029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 261 - 409
Target Start/End: Complemental strand, 13736793 - 13736645
Alignment:
Q  261 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccg 360  Q
    ||||||||||||||||||||||||| | |||||||| ||||||||| |||||||||||||| |||| |||||||||||||  ||| || ||||||| | |    
T  13736793 accgaagttgttactaggttgagtcgccaccaggtccctctctttacgacgtttcgtggcactgcctaaaattgtgcaaggaagactaccaaccacactg 13736694  T
Q  361 cctccaggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    ||||||||||||||||||| || |||||| ||| ||| |||||||||||    
T  13736693 cctccaggataaaacaagcacatctacaaatgtgcgaataactactgca 13736645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 263 - 409
Target Start/End: Complemental strand, 11614205 - 11614059
Alignment:
Q  263 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcc 362  Q
    |||||||||||||||||||||||||||  |||| | ||||||||| ||||||  ||||| ||| |||||||||||||| |||| ||||||||||||||||    
T  11614205 cgaagttgttactaggttgagtcacgatgaggttgttctctttaaaacgttttatggcactgctcaaaattgtgcaaggcagactatcaaccacgccgcc 11614106  T
Q  363 tccaggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    ||||||||||||||||| ||| ||||| ||| || ||||||| ||||    
T  11614105 tccaggataaaacaagcacaattacaattgtgcggttaactaatgca 11614059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 301 - 393
Target Start/End: Complemental strand, 16836231 - 16836139
Alignment:
Q  301 tctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgt 393  Q
    ||||||||||||||||||||| ||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  16836231 tctttaagacgtttcgtggcactgcccaaaattgtacaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgt 16836139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 301 - 409
Target Start/End: Complemental strand, 17964634 - 17964526
Alignment:
Q  301 tctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgatta 400  Q
    ||||||||||||||||||||| |  ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| || ||||||| || |||    
T  17964634 tctttaagacgtttcgtggcactatccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggtta 17964535  T
Q  401 actactgca 409  Q
    |||||||||    
T  17964534 actactgca 17964526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 408 - 540
Target Start/End: Complemental strand, 12797191 - 12797060
Alignment:
Q  408 cattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatact 507  Q
    |||||||| |||||  ||||||||||||| ||||||||| ||||| ||||||||| |||||||||  | ||| ||||||| ||||| || ||||| ||||    
T  12797191 cattagtctcatcccgttggatgtgtttaggactttcttactagttattcctttcatcaaaggatcaactaagtctttatgagtacatgtacgatttact 12797092  T
Q  508 ttaaccgttccttttagagctctctaattattc 540  Q
    ||||||||||| |||||||||||||||||||||    
T  12797091 ttaaccgttcc-tttagagctctctaattattc 12797060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 267 - 411
Target Start/End: Complemental strand, 22695380 - 22695236
Alignment:
Q  267 gttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctcca 366  Q
    ||||||||||||||||| |||||  | || ||||||||||| |||||||||| || ||| ||||||||||||||||| |  ||||| ||| |||||||||    
T  22695380 gttgttactaggttgagacacgattatgttgctctctttaacacgtttcgtgacattgctcaaaattgtgcaagacatacaatcaatcacaccgcctcca 22695281  T
Q  367 ggataaaacaagcccaactacaactgttcgattaactactgcatt 411  Q
     |||||||||||  || |||||||||| || ||||| ||||||||    
T  22695280 cgataaaacaagtacagctacaactgtgcggttaaccactgcatt 22695236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 210 - 272
Target Start/End: Complemental strand, 17964696 - 17964634
Alignment:
Q  210 tgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgtt 272  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  17964696 tgtttttggatttccaaactgttgtatttggatttccaaattctattatctaccgaagttgtt 17964634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 277 - 376
Target Start/End: Original strand, 19478145 - 19478243
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||||||||||||||||||||||| |||| | ||| || |||||||||  ||| || ||||||||||| ||||| |||||||||    
T  19478145 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccacgataaaaca 19478243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 277 - 374
Target Start/End: Original strand, 3901909 - 3902006
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaa 374  Q
    |||||||||||||||||||||||||||||||||||||| | |||| |  ||||  |||||||||  ||| || ||||| |||||||||||||||||||    
T  3901909 ggttgagtcacgaccaggtcgctctctttaagacgttttgcggcactatccaagtttgtgcaaggtagaataccaaccgcgccgcctccaggataaaa 3902006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 263 - 409
Target Start/End: Original strand, 22609556 - 22609696
Alignment:
Q  263 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaa-ttgtgcaagacagattatcaaccacgccgc 361  Q
    ||||||||||| |||||| ||||||||||||       ||||||||||||||||||| | |||| |||| ||||| |||| | | |||||  ||||||||    
T  22609556 cgaagttgttattaggttaagtcacgaccag-------tctttaagacgtttcgtggtactgcctaaaaattgtggaagataaactatcagtcacgccgc 22609648  T
Q  362 ctccaggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    |||||||||||||||||| ||||||||||||   ||||||| ||||||    
T  22609649 ctccaggataaaacaagctcaactacaactgcgtgattaacaactgca 22609696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 276 - 376
Target Start/End: Complemental strand, 12183100 - 12183000
Alignment:
Q  276 aggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaac 375  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| | |||||  ||||||||   ||| || ||||| || ||||||||| |||||||    
T  12183100 aggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaagtttgtgcaatgtagactaacaaccgcgtcgcctccagaataaaac 12183001  T
Q  376 a 376  Q
    |    
T  12183000 a 12183000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 277 - 376
Target Start/End: Complemental strand, 13605190 - 13605092
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||| |||| |||||||||||||||||||| |||| | ||| || |||||||||  ||| || ||||||||||| |||||||||||||||    
T  13605190 ggttgagtcacgactaggttgctctctttaagacgtttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 13605092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 292 - 357
Target Start/End: Original strand, 35129640 - 35129704
Alignment:
Q  292 aggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacg 357  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||| |||| |||||||||||    
T  35129640 aggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaag-cagactatcaaccacg 35129704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 22698338 - 22698243
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  22698338 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 22698243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 31981560 - 31981655
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || ||||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  31981560 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 31981655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 34142080 - 34142175
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| ||||||||||||||||||||  | ||| || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  34142080 tgagtcacgaccaggtcgctttctttaagacgtttcgtggctctaccc-aagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 34142175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 34154696 - 34154791
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| ||||||||||||||||||||  | ||| || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  34154696 tgagtcacgaccaggtcgctttctttaagacgtttcgtggctctaccc-aagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 34154791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 352 - 411
Target Start/End: Complemental strand, 11534735 - 11534676
Alignment:
Q  352 accacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgcatt 411  Q
    |||||||||||||||||||||||||||| ||||||||||||| || | ||||||||||||    
T  11534735 accacgccgcctccaggataaaacaagctcaactacaactgtgcggtgaactactgcatt 11534676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 352 - 411
Target Start/End: Complemental strand, 11560245 - 11560186
Alignment:
Q  352 accacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgcatt 411  Q
    |||||||||||||||||||||||||||| ||||||||||||| || | ||||||||||||    
T  11560245 accacgccgcctccaggataaaacaagctcaactacaactgtgcggtgaactactgcatt 11560186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 204 - 391
Target Start/End: Complemental strand, 2760427 - 2760240
Alignment:
Q  204 ttctgttgtttttggatttccaaacagttgtattt-ggatttccaaattctattat------------ccaccgaagttgttactaggttgagtcacgac 290  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||| |||| |            | | |||||||||||||||||| ||| |||||    
T  2760427 ttctgttgtttttggatttccaaacagttgtattttggttttccaaattgtattttgttagagaataactagcgaagttgttactaggttaagttacgac 2760328  T
Q  291 caggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaac 390  Q
    ||||||| ||||||||| |||||| |||||          ||| |||||| |||| |||||||||   ||||||||||||||||||||| ||| ||||||    
T  2760327 caggtcgttctctttaaaacgttttgtggc----------attatgcaaggcagactatcaacca---cgcctccaggataaaacaagctcaaatacaac 2760241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 32815138 - 32815051
Alignment:
Q  300 ctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaa 389  Q
    ||||||||||||||||| |||| |||||||||||||||||| |||| ||||||||||| | || |||| ||||||| |||||| ||||||    
T  32815138 ctctttaagacgtttcgcggcactgcccaaaattgtgcaag-cagactatcaaccacgacacccccagtataaaac-agcccagctacaa 32815051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 276 - 376
Target Start/End: Complemental strand, 5601072 - 5600972
Alignment:
Q  276 aggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaac 375  Q
    |||||||||||||||||||||||| |||||||||||||||| | || | ||| |  ||||| |||  ||| || ||||| ||||||||||| ||||||||    
T  5601072 aggttgagtcacgaccaggtcgctttctttaagacgtttcgcgacactacccgagtttgtgtaaggtagaataacaaccgcgccgcctccaagataaaac 5600973  T
Q  376 a 376  Q
    |    
T  5600972 a 5600972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 409
Target Start/End: Complemental strand, 9751920 - 9751775
Alignment:
Q  265 aagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaa--ttgtgcaagacagattatcaaccacgccgcc 362  Q
    ||||||| |||||||||||||||||  || |||||||||||||||| ||| |||||| | |||||||  |||||||||    | |||||| |||| || |    
T  9751920 aagttgtcactaggttgagtcacgaatag-tcgctctctttaagacattttgtggcactacccaaaaaattgtgcaaggggaactatcaatcacgtcgtc 9751822  T
Q  363 tccaggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    |  ||||||||| ||| | |||||||| ||| |||||||||||||||    
T  9751821 tgtaggataaaataagtctaactacaattgtgcgattaactactgca 9751775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 277 - 376
Target Start/End: Original strand, 10642706 - 10642805
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||| | |||||| ||||||||||||||||||||| |  || |  |||||||||  ||| || ||||| |||||||||| ||||||||||    
T  10642706 ggttgagtcacgacaatgtcgctttctttaagacgtttcgtggcactatccgaggttgtgcaaggtagactaacaaccgcgccgcctcccggataaaaca 10642805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 409 - 522
Target Start/End: Complemental strand, 19992828 - 19992718
Alignment:
Q  409 attagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatactt 508  Q
    ||||||| ||||| |||||||||||||| |||||||||   | | |||||||| ||||||||||  |||||||||| |||||||||| |  ||| || ||    
T  19992828 attagtcccatccaattggatgtgtttaggactttctt---aattattccttttgtcaaaggatcaaataattcttcatcagtacgtacttgatctaatt 19992732  T
Q  509 taaccgttcctttt 522  Q
    || |||||||||||    
T  19992731 tacccgttcctttt 19992718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 310
Target Start/End: Complemental strand, 2882867 - 2882821
Alignment:
Q  264 gaagttgttactaggttgagtcacgaccaggtcgctctctttaagac 310  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||    
T  2882867 gaagttgttactaggttgagtcacgaccatatcgctctctttaagac 2882821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 21396699 - 21396794
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||  |||||||||||||||    
T  21396699 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccatctccaggataaaaca 21396794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 24192575 - 24192480
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  ||  | |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  24192575 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctgagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 24192480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 29491332 - 29491237
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    ||||||||||||| |||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  29491332 tgagtcacgaccaagtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 29491237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 34375919 - 34376014
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||| ||||||||| |||||||||||||||| |||| |  || || ||||||||   |||||| ||||| ||||| |||||||||||||||    
T  34375919 tgagtcacgatcaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaacgtagattagcaaccgcgccgtctccaggataaaaca 34376014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 310
Target Start/End: Complemental strand, 2863564 - 2863518
Alignment:
Q  264 gaagttgttactaggttgagtcacgaccaggtcgctctctttaagac 310  Q
    |||||||||||||||||||||||| | || |||||||||||||||||    
T  2863564 gaagttgttactaggttgagtcactatcatgtcgctctctttaagac 2863518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 315
Target Start/End: Complemental strand, 11956800 - 11956762
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagacgtttc 315  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  11956800 ggttgagtcatgaccaggtcgctctctttaagacgtttc 11956762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 278 - 404
Target Start/End: Original strand, 12851809 - 12851937
Alignment:
Q  278 gttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggat--aaaac 375  Q
    ||||||||||||||| | ||||||   ||||| |||||| | || |||||||||||||||||| || | ||||||||| ||| | || |||||  ||||     
T  12851809 gttgagtcacgaccaagacgctcttcataagatgtttcgcgccactgcccaaaattgtgcaaggcaaactatcaaccatgccacttctaggataaaaaaa 12851908  T
Q  376 aagcccaactacaactgttcgattaacta 404  Q
    ||| | |||||||| ||| ||||||||||    
T  12851909 aagtctaactacaattgtgcgattaacta 12851937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 280 - 321
Target Start/End: Original strand, 21401755 - 21401796
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggca 321  Q
    |||||||||||||||||||| |||||||||||||||| ||||    
T  21401755 tgagtcacgaccaggtcgctttctttaagacgtttcgcggca 21401796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 207 - 256
Target Start/End: Original strand, 22609481 - 22609530
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctatt 256  Q
    ||||| |||||||||||| |||  ||||||||||||||||||||||||||    
T  22609481 tgttggttttggatttccgaactattgtatttggatttccaaattctatt 22609530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 280 - 321
Target Start/End: Complemental strand, 24191478 - 24191437
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggca 321  Q
    |||||||||||||||||||| |||||||||||||||| ||||    
T  24191478 tgagtcacgaccaggtcgctttctttaagacgtttcgcggca 24191437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 292 - 338
Target Start/End: Original strand, 14041703 - 14041749
Alignment:
Q  292 aggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgca 338  Q
    |||||||||||||||| |||||||||| || |||| |||||||||||    
T  14041703 aggtcgctctctttaaaacgtttcgtgacactgcctaaaattgtgca 14041749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 409
Target Start/End: Complemental strand, 4157413 - 4157336
Alignment:
Q  332 ttgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    |||||||||||| | | |||||||| | ||||| |||||||||||| | || ||||||| || || ||||||||||||    
T  4157413 ttgtgcaagacatactttcaaccacactgcctctaggataaaacaaactcagctacaacggtgcggttaactactgca 4157336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 313
Target Start/End: Complemental strand, 6728430 - 6728397
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtt 313  Q
    |||||||||||||||||||| |||||||||||||    
T  6728430 tgagtcacgaccaggtcgctttctttaagacgtt 6728397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 13736855 - 13736814
Alignment:
Q  212 tttttggatttccaaacagttgtatttggatttccaaattct 253  Q
    ||||||||||||||||   |||||||||||||||||||||||    
T  13736855 tttttggatttccaaaactttgtatttggatttccaaattct 13736814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 15991878 - 15991829
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctatt 256  Q
    ||||| ||||||| |||||||  |||||||||| ||||||||||||||||    
T  15991878 tgttggttttggaattccaaattgttgtatttgaatttccaaattctatt 15991829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 15999540 - 15999491
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctatt 256  Q
    ||||| ||||||| |||||||  |||||||||| ||||||||||||||||    
T  15999540 tgttggttttggaattccaaattgttgtatttgaatttccaaattctatt 15999491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 449
Target Start/End: Complemental strand, 22693873 - 22693832
Alignment:
Q  408 cattagtcacatcctattggatgtgtttatgactttctttct 449  Q
    ||||||||  || |||||||||||||||||||||||||||||    
T  22693873 cattagtctaatactattggatgtgtttatgactttctttct 22693832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 377
Target Start/End: Complemental strand, 31990955 - 31990898
Alignment:
Q  320 caatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaa 377  Q
    |||||| |||| |||||||||  | ||||||||||||| |||||||| ||||||||||    
T  31990955 caatgctcaaagttgtgcaaggaatattatcaaccacgacgcctccacgataaaacaa 31990898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 208 - 248
Target Start/End: Complemental strand, 12406531 - 12406491
Alignment:
Q  208 gttgtttttggatttccaaacagttgtatttggatttccaa 248  Q
    ||||||||||||||| ||||| ||||||||||||||| |||    
T  12406531 gttgtttttggattttcaaactgttgtatttggattttcaa 12406491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 277 - 321
Target Start/End: Complemental strand, 17281662 - 17281618
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggca 321  Q
    ||||||||||||| || |||||| |||||||||||||||| ||||    
T  17281662 ggttgagtcacgagcatgtcgctttctttaagacgtttcgcggca 17281618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 19995437 - 19995373
Alignment:
Q  342 cagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    |||| ||||||||||| | ||| | |||||||||||||||| |||||||| | || |||||||||    
T  19995437 cagactatcaaccacggcaccttcgggataaaacaagcccagctacaactatgcggttaactact 19995373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 129; Significance: 2e-66; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 206 - 409
Target Start/End: Complemental strand, 166257 - 166053
Alignment:
Q  206 ctgttgtttttggatttccaaacagttgtattt-ggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctt 304  Q
    ||||||||||||||||||||||| ||||||||| || |||||||||||| || || |||||| ||| |||||||||||||||| ||||||||||||||||    
T  166257 ctgttgtttttggatttccaaactgttgtattttggttttccaaattctgttttctaccgaaattgatactaggttgagtcacaaccaggtcgctctctt 166158  T
Q  305 taagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaacta 404  Q
    ||||||||||||||||| |||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||| || ||||||| || |||| ||    
T  166157 taagacgtttcgtggcactgccaaaaattgtgcaagacatactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaatta 166058  T
Q  405 ctgca 409  Q
    |||||    
T  166057 ctgca 166053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 124; Significance: 2e-63; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 207 - 406
Target Start/End: Original strand, 25325 - 25524
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||||| ||||||||| ||||| | |||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |  ||||| |||||||||    
T  25325 tgttgtctttggattttcaaactgctgtatttggatttccaaattctattatctatcgaagttgttactaggttgagtcacaattaggtcactctcttta 25424  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    ||||||| |||| || |||  |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||    
T  25425 agacgttacgtgacactgcgtaaaattgtgcaagacagactatcaaccacgccgcgtccaggataaaacaagcccaactacaactgtgcggttaactact 25524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 334 - 411
Target Start/End: Original strand, 29209 - 29285
Alignment:
Q  334 gtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgcatt 411  Q
    |||||||||| | |||||||||||||| || |||||||||| ||| | ||||| |||||| || ||||||||||||||    
T  29209 gtgcaagaca-actatcaaccacgccgtcttcaggataaaataagtctaactataactgtgcggttaactactgcatt 29285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 123; Significance: 6e-63; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 207 - 409
Target Start/End: Original strand, 35560 - 35762
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtatttggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttta 306  Q
    |||| |||||| |||| ||||| |||||||||||||||||||||||||||||  || ||||||||||||||||| ||| ||||||| | |||||||||||    
T  35560 tgttatttttgcattttcaaactgttgtatttggatttccaaattctattatttactgaagttgttactaggttaagttacgaccatgccgctctcttta 35659  T
Q  307 agacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactact 406  Q
    |||||||||||| || || ||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||| |||||||||| || |||||||||    
T  35660 agacgtttcgtgacactggccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagtccagctacaactgtgcggttaactact 35759  T
Q  407 gca 409  Q
    |||    
T  35760 gca 35762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 120; Significance: 4e-61; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 207 - 409
Target Start/End: Original strand, 82991 - 83194
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtattt-ggatttccaaattctattatccaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 305  Q
    ||||||||||||||||| |||| ||||||||| || |||||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||    
T  82991 tgttgtttttggatttctaaactgttgtattttggttttccaaattctgttttctaccgaagttgttactaggttgagtcacgaccaggtcgctctcttt 83090  T
Q  306 aagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactac 405  Q
    ||||||||||||| ||   ||||||||| |||||| |||| ||||||||| ||||||||||||||||||||||| || || ||||||| || ||||||||    
T  83091 aagacgtttcgtgacaccacccaaaattatgcaaggcagactatcaaccatgccgcctccaggataaaacaagctcagctgcaactgtgcggttaactac 83190  T
Q  406 tgca 409  Q
    ||||    
T  83191 tgca 83194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 407 - 522
Target Start/End: Complemental strand, 48303 - 48187
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattcttt-atcagtacgtgcacgatata 505  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||| || ||||||    
T  48303 gcattagtcccatcctattggatgtgtttaggactttctttctagtaattcctttcgtcaaaggattgactaattgtttcatcagtacgtacatgatata 48204  T
Q  506 ctttaaccgttcctttt 522  Q
    |||||||||||||||||    
T  48203 ctttaaccgttcctttt 48187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 407 - 522
Target Start/End: Original strand, 150330 - 150446
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattcttt-atcagtacgtgcacgatata 505  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||| || ||||||    
T  150330 gcattagtcccatcctattggatgtgtttaggactttctttctagtaattcctttcgtcaaaggattgactaattgtttcatcagtacgtacatgatata 150429  T
Q  506 ctttaaccgttcctttt 522  Q
    |||||||||||||||||    
T  150430 ctttaaccgttcctttt 150446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 407 - 522
Target Start/End: Complemental strand, 212716 - 212600
Alignment:
Q  407 gcattagtcacatcctattggatgtgttt-atgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatata 505  Q
    ||||||||| ||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  212716 gcattagtctcatcctattcgatgtgttttaggactttctttctagtaattcctttcgtcaaaggattgactaattctttatcagtacgtacatgatata 212617  T
Q  506 ctttaaccgttcctttt 522  Q
    |||||||||||||||||    
T  212616 ctttaaccgttcctttt 212600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 256 - 387
Target Start/End: Original strand, 3966 - 4097
Alignment:
Q  256 tatccaccgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaacca 355  Q
    |||| ||||||||||||||||||||||||||||||||  |||||||||||||||| |||  |||||||||| ||| || ||||||||| |  ||||||||    
T  3966 tatctaccgaagttgttactaggttgagtcacgaccatatcgctctctttaagactttttatggcaatgccaaaatttttgcaagacataccatcaacca 4065  T
Q  356 cgccgcctccaggataaaacaagcccaactac 387  Q
    ||||||||||||||||||||||||||||||||    
T  4066 cgccgcctccaggataaaacaagcccaactac 4097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2020 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold2020
Description:

Target: scaffold2020; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 206 - 393
Target Start/End: Original strand, 282 - 483
Alignment:
Q  206 ctgttgtttttggatttccaaacagttgtatttggatttccaaattctatt-----------atccaccgaagttgt---tactaggttgagtcacgacc 291  Q
    ||||||||||||||||||||||| ||||||||| |||||| ||||||| ||           ||| |||||||||||   |||||||||||||||||||     
T  282 ctgttgtttttggatttccaaactgttgtatttagatttcgaaattctttttgaaaaagaatatctaccgaagttgtaattactaggttgagtcacgact 381  T
Q  292 aggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaact 391  Q
    | |||||| | ||||||||||||| ||||| || ||||| |||||||||||| | ||||||||||| ||||||||||||||||||||| || ||||||||    
T  382 atgtcgctttttttaagacgtttcatggcattgtccaaagttgtgcaagacacactatcaaccacgtcgcctccaggataaaacaagctcagctacaact 481  T
Q  392 gt 393  Q
    ||    
T  482 gt 483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 206 - 393
Target Start/End: Complemental strand, 165213 - 165012
Alignment:
Q  206 ctgttgtttttggatttccaaacagttgtatttggatttccaaattctatt-----------atccaccgaagttgt---tactaggttgagtcacgacc 291  Q
    ||||||||||||||||||||||| ||||||||| |||||| ||||||| ||           ||| |||||||||||   |||||||||||||||||||     
T  165213 ctgttgtttttggatttccaaactgttgtatttagatttcgaaattctttttgaaaaagaatatctaccgaagttgtaattactaggttgagtcacgact 165114  T
Q  292 aggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaact 391  Q
    | |||||| | ||||||||||||| ||||| || ||||| |||||||||||| | ||||||||||| ||||||||||||||||||||| || ||||||||    
T  165113 atgtcgctttttttaagacgtttcatggcattgtccaaagttgtgcaagacacactatcaaccacgtcgcctccaggataaaacaagctcagctacaact 165014  T
Q  392 gt 393  Q
    ||    
T  165013 gt 165012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 268 - 409
Target Start/End: Original strand, 255804 - 255945
Alignment:
Q  268 ttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccag 367  Q
    ||||||||| ||| || |||||||||||| |||||||||||| ||||||||||| | ||||||||||||||||||| | ||||||| | |||||||||||    
T  255804 ttgttactatgttaagacacgaccaggtcactctctttaagaggtttcgtggcactacccaaaattgtgcaagacatactatcaactatgccgcctccag 255903  T
Q  368 gataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    ||||||||||| ||| ||||||||||  | ||||||||||||    
T  255904 gataaaacaagtccagctacaactgtgtggttaactactgca 255945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 74; Significance: 1e-33; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 410 - 522
Target Start/End: Complemental strand, 51255 - 51146
Alignment:
Q  410 ttagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatacttt 509  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||  ||| | ||| || ||||||||||    
T  51255 ttagtcacatcctattggatgtgtttaggactttctttctagtaattcctttcgtcaaaggattgactaattctt--tca-tccgtacatgatatacttt 51159  T
Q  510 aaccgttcctttt 522  Q
    |||||||||||||    
T  51158 aaccgttcctttt 51146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 271 - 376
Target Start/End: Original strand, 37001 - 37105
Alignment:
Q  271 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggat 370  Q
    ||||| || |||||||||||||||||||| |||||||||||||||| |||| |  || ||||||||||||  ||| || ||||| ||||| |||||||||    
T  37001 ttactggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaaattgtgcaaggtagactagcaaccgcgccgtctccaggat 37099  T
Q  371 aaaaca 376  Q
    ||||||    
T  37100 aaaaca 37105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 407 - 508
Target Start/End: Original strand, 60155 - 60256
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattcttt-atcagtacgtgcacgatata 505  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||| || ||||||    
T  60155 gcattagtc-catcctattggatgtgtttaggactttctttctagttattcctttcgtcaaaggattgactaattctttcatcagtacgtacatgatata 60253  T
Q  506 ctt 508  Q
    |||    
T  60254 ctt 60256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 407 - 508
Target Start/End: Original strand, 64357 - 64458
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattcttt-atcagtacgtgcacgatata 505  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||| || ||||||    
T  64357 gcattagtc-catcctattggatgtgtttaggactttctttctagttattcctttcgtcaaaggattgactaattctttcatcagtacgtacatgatata 64455  T
Q  506 ctt 508  Q
    |||    
T  64456 ctt 64458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 407 - 522
Target Start/End: Original strand, 21482 - 21597
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatac 506  Q
    ||||||||| ||||||| |||||||||||| |||||||||||||||||||| ||| ||||||||||| | ||||||||||||||||| | || ||| |||    
T  21482 gcattagtcccatcctaatggatgtgtttaggactttctttctagtaattcattttgtcaaaggattaactaattctttatcagtacatacatgatctac 21581  T
Q  507 tttaaccgttcctttt 522  Q
    || ||||||| |||||    
T  21582 ttcaaccgtttctttt 21597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 263 - 409
Target Start/End: Original strand, 2291 - 2436
Alignment:
Q  263 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcc 362  Q
    ||||||||||| |||||||||||| || ||||||| ||||||||| |||||| ||| || ||   |||||||||||||||||| ||||||||||||||||    
T  2291 cgaagttgttattaggttgagtcatgatcaggtcgttctctttaatacgttttgtgccattgtttaaaattgtgcaagacaga-tatcaaccacgccgcc 2389  T
Q  363 tccaggataaaacaagcccaactacaactgttcgattaactactgca 409  Q
    || || ||||||||| | ||  |||||||||  ||||||||||||||    
T  2390 tctagtataaaacaaactcaggtacaactgtgagattaactactgca 2436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 271 - 393
Target Start/End: Complemental strand, 171820 - 171700
Alignment:
Q  271 ttactaggttgagtcac-gaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccagga 369  Q
    |||||||| |||||| | ||| |||||||||||||||||||||||||||||| |||| ||||||||||||| |||| ||||||||||| || | | ||||    
T  171820 ttactaggctgagtcgcagactaggtcgctctctttaagacgtttcgtggcactgcctaaaattgtgcaag-cagactatcaaccacgacgtc-ctagga 171723  T
Q  370 taaaacaagcccaactacaactgt 393  Q
    |||||| |||||||||||||||||    
T  171722 taaaac-agcccaactacaactgt 171700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 54; Significance: 9e-22; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 207 - 352
Target Start/End: Original strand, 15197 - 15355
Alignment:
Q  207 tgttgtttttggatttccaaacagttgtattt-ggatttccaaattctatt------------atccaccgaagttgttactaggttgagtcacgaccag 293  Q
    |||||||||||||||| ||||| ||||||||| || |||||||||||||||            ||| ||||||||||||||||||||||||||||||||     
T  15197 tgttgtttttggatttacaaactgttgtattttggttttccaaattctattttttaagaaaatatctaccgaagttgttactaggttgagtcacgaccat 15296  T
Q  294 gtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaa 352  Q
     || |||  ||||||| ||||||| ||| ||| ||||||||||||||||||| ||||||    
T  15297 atcactccttttaagatgtttcgtagcactgctcaaaattgtgcaagacagactatcaa 15355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 277 - 376
Target Start/End: Complemental strand, 2870 - 2772
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||||| ||||||||||||||||||| || | ||| || |||||||||  ||| || ||||||||||| |||||||||||||||    
T  2870 ggttgagtcacgaccaggtcgcgctctttaagacgtttcgtgacactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 2772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 277 - 376
Target Start/End: Complemental strand, 10830 - 10732
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||||| ||||||||||||||||||| || | ||| || |||||||||  ||| || ||||||||||| |||||||||||||||    
T  10830 ggttgagtcacgaccaggtcgcgctctttaagacgtttcgtgacactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 10732  T

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Target: scaffold0011 (Bit Score: 52; Significance: 1e-20; HSPs: 4)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 277 - 376
Target Start/End: Original strand, 1562 - 1660
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||| ||||||||||||||||||||||||||||||||||| |||| | ||| || |||||||||  ||| || ||||||||||| |||||||||||||||    
T  1562 ggttaagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 1660  T

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Target: scaffold0011; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 277 - 376
Target Start/End: Original strand, 7043 - 7141
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||| |||||||||||| |||||||||||||||||| |||| | ||| || |||||||||  ||| || ||||||||||| |||||||||||||||    
T  7043 ggttgagttacgaccaggtcgttctctttaagacgtttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 7141  T

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Target: scaffold0011; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 350 - 408
Target Start/End: Complemental strand, 155544 - 155486
Alignment:
Q  350 caaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgc 408  Q
    ||||||||||||||| |||||||||||||  || |||||||||| ||||||||||||||    
T  155544 caaccacgccgcctctaggataaaacaagttcagctacaactgtgcgattaactactgc 155486  T

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Target: scaffold0011; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 319
Target Start/End: Complemental strand, 155587 - 155552
Alignment:
Q  284 tcacgaccaggtcgctctctttaagacgtttcgtgg 319  Q
    |||||||||||||| |||||||||||||||||||||    
T  155587 tcacgaccaggtcgttctctttaagacgtttcgtgg 155552  T

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Target: scaffold0128 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 274 - 406
Target Start/End: Original strand, 13265 - 13397
Alignment:
Q  274 ctaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaa 373  Q
    |||||| ||||| ||| || ||| || |||||||||||||| ||| || ||||||||||||| ||||  ||| ||||||||| |  ||||||| |||| |    
T  13265 ctaggtggagtcccgatcaagtcactttctttaagacgtttggtgacactgcccaaaattgttcaaggtagactatcaaccatggtgcctccaagataca 13364  T
Q  374 acaagcccaactacaactgttcgattaactact 406  Q
    |||||  ||||||||||||| || |||||||||    
T  13365 acaagttcaactacaactgtgcggttaactact 13397  T

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Target: scaffold0055 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 3058 - 3153
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  3058 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 3153  T

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Target: scaffold0052 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 81477 - 81382
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  81477 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 81382  T

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Target: scaffold0690 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 407 - 522
Target Start/End: Original strand, 6854 - 6966
Alignment:
Q  407 gcattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatac 506  Q
    ||||||||| ||| | |||||||||||||| |||||| ||   ||| |||||||||||||||||||  | |||||||| |||| ||||| || |||||||    
T  6854 gcattagtctcattccattggatgtgtttaggactttgtt---agttattcctttcgtcaaaggatcaattaattcttcatcattacgtacatgatatac 6950  T
Q  507 tttaaccgttcctttt 522  Q
    ||||  ||||||||||    
T  6951 tttattcgttcctttt 6966  T

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Target: scaffold0594 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 9303 - 9208
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  9303 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggaagactagcaaccgcgccgtctccaggataaaaca 9208  T

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Target: scaffold0166 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 13835 - 13740
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  13835 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 13740  T

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Target: scaffold0166; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 271 - 321
Target Start/End: Complemental strand, 19302 - 19252
Alignment:
Q  271 ttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggca 321  Q
    ||||| || ||||||||||||| |||||| |||||||||||||||| ||||    
T  19302 ttactggggtgagtcacgaccatgtcgctttctttaagacgtttcgcggca 19252  T

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Target: scaffold0067 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 277 - 321
Target Start/End: Complemental strand, 34067 - 34023
Alignment:
Q  277 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggca 321  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  34067 ggttgagtcacgaccaggtcgctctctttaagacgtttcgcggca 34023  T

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Target: scaffold0014 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 31545 - 31640
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  31545 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 31640  T

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Target: scaffold0014; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 26373 - 26468
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    ||||| |||| || ||||||||||||||||||||||| |||| |  ||  |||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  26373 tgagttacgatcaagtcgctctctttaagacgtttcgcggcact-acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 26468  T

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Target: scaffold0517 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 3563 - 3658
Alignment:
Q  280 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 376  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| |||||  ||||||||||||||    
T  3563 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtttccaggataaaaca 3658  T

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Target: scaffold1050 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold1050
Description:

Target: scaffold1050; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 292 - 409
Target Start/End: Original strand, 1151 - 1268
Alignment:
Q  292 aggtcgctctctttaagacgtttcgtggcaatgcccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcccaactacaact 391  Q
    |||| ||||| |||||||||||  ||| || ||| ||||||| |||||| | || ||| |||||||| |||||||||  ||||||||  || |||| |||    
T  1151 aggttgctctatttaagacgttctgtgacattgcacaaaattatgcaaggcggactataaaccacgctgcctccaggcaaaaacaagttcagctacgact 1250  T
Q  392 gttcgattaactactgca 409  Q
    || || ||||||||||||    
T  1251 gtgcggttaactactgca 1268  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 272 - 310
Target Start/End: Complemental strand, 1329 - 1291
Alignment:
Q  272 tactaggttgagtcacgaccaggtcgctctctttaagac 310  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  1329 tactgggttgagtcacgaccaggtcgctttctttaagac 1291  T

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