View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19529_low_16 (Length: 459)
Name: NF19529_low_16
Description: NF19529
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19529_low_16 |
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Alignment Details
Target: chr6 (Bit Score: 419; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 419; E-Value: 0
Query Start/End: Original strand, 9 - 443
Target Start/End: Complemental strand, 24812724 - 24812290
Alignment:
| Q |
9 |
agcataggaagattgccaccaggaaggagaggttggcctttgataggtgacagtatcaattggtacaatgctgttgcaagttctcatcctcctcaatttg |
108 |
Q |
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| T |
24812724 |
agcataggaagattgccaccaggaaggagaggttggcctttgataggtgacagtatcaattggtacaatgctgttgcaagttctcatcctcctcaatttg |
24812625 |
T |
|
| Q |
109 |
ttgaagaaatggtgcaaaggtatttactagtataccataactttgaaaatattgccaaatagagattatagtggcgctatagcgctgttgtgtcgagaaa |
208 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
24812624 |
ttgaagaaatggtgcaaaggtatttactagtataccataactttgaaaatattgccaaatagagattatagcggcgctatagcgctgttgtgtcgagaaa |
24812525 |
T |
|
| Q |
209 |
tttaaacaaacttctagtttttgctatccacaatcagaacactgttttctaacagataaagccttccatttggtataggtatggtaagattttttcatgt |
308 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24812524 |
tttaaacaaacttctagtttttgctatccacaatcagaacactgttttctaacagataaagccttccatttggtataggtatggtaagattttttcatgt |
24812425 |
T |
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| Q |
309 |
agcctatttggaaaatgggcagtggtgtcatccgatccaagctttaaccgttttgtaatgcaaaatgaaggaaaattattcatgtcaagttatccaaaat |
408 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
24812424 |
agcctatttggaaaatgggcagtggtgtcatctgatccaagcttcaaccgttttgtaatgcaaaatgaaggcaaattattcatgtcaagttatccaaaat |
24812325 |
T |
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| Q |
409 |
cttttagagatttggttggtaaaaatggtgtgatt |
443 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
24812324 |
cttttagagatttggttggtaaaaatggtgtgatt |
24812290 |
T |
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