View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19529_low_26 (Length: 367)
Name: NF19529_low_26
Description: NF19529
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19529_low_26 |
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Alignment Details
Target: chr3 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 26 - 256
Target Start/End: Complemental strand, 25717498 - 25717268
Alignment:
| Q |
26 |
gcttctttgggatgcaaactgtgagttcttttataaaccaaaccacaacaagtcacagttaacggataacgaagtaaatgtcatatatcgaaagaaaatg |
125 |
Q |
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| T |
25717498 |
gcttctttgggatccaaacagtgagttcttttataaaccaaaccacaacaagtcacaattaacggataacgaagtaaatgtcatatatcgaaagaaaatg |
25717399 |
T |
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| Q |
126 |
aattaaggttggtgatgatcaattaaaaactatagtgatgtttttcctatttaaataacattggagggagttcattgtaatttttccgatatcaaataat |
225 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25717398 |
aattaaggttggtgatgatcaattaaaaactatagtgatgtttctcctatttaaataacattggagggagttcattgtaatttttccgatatcaaataat |
25717299 |
T |
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| Q |
226 |
attattttgtctcttattattagtccatttg |
256 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
25717298 |
attattttgtctcttattattagtccatttg |
25717268 |
T |
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