View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1952_high_6 (Length: 581)
Name: NF1952_high_6
Description: NF1952
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1952_high_6 |
 | |
|
| [»] scaffold0692 (1 HSPs) |
| | |
|
Alignment Details
Target: chr5 (Bit Score: 554; Significance: 0; HSPs: 22)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 554; E-Value: 0
Query Start/End: Original strand, 1 - 566
Target Start/End: Complemental strand, 10559185 - 10558620
Alignment:
| Q |
1 |
agtcttgctatgccaaaatcactcacatgagcaacattgtcttcatcaataaggacattgcttggctttagatcacaatgaaggaccaattgctcacatt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10559185 |
agtcttgctatgccaaaatcactcacatgagcaacattgtcttcatcaataaggacattgcttggctttagatcacaatgaaggaccaattgctcacatt |
10559086 |
T |
|
| Q |
101 |
ctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacattcatcatccttga |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10559085 |
ctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacattcatcatccttga |
10558986 |
T |
|
| Q |
201 |
atgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagttaaaatc |
300 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10558985 |
atgcaaccagttttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagttaaaatc |
10558886 |
T |
|
| Q |
301 |
ttaaccagatttcgatgtctaatatttttgagtgcattacattcggtaataaaactcttgggagctccattcttttcaaggtccaggaccttcacagcaa |
400 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10558885 |
ttaaccagatttcgatgtctaatattttttagtgcattacattcggtaataaaactcttgtgagctccattcttttcaaggtccaggaccttcacagcaa |
10558786 |
T |
|
| Q |
401 |
taactttatcttctgacataagatttcctttatacaccgaaccaaagcctcctgatccaatcaagtttctagatgagaagccatcagttgcctgatacaa |
500 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10558785 |
taactttatcttctgacataagatttcctttatacaccgaaccaaagcctcctgatccaatcaagtttctagatgagaagccatcagttgcctgatacaa |
10558686 |
T |
|
| Q |
501 |
gtcttggtaagaaaccatagcaagttggtcaattattggtgaatctgaagatggtttcttgtttct |
566 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10558685 |
gtcttggtaagaaaccatagcaagttggtcaattattggtgaatctgaagatggtttcttgtttct |
10558620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 330; E-Value: 0
Query Start/End: Original strand, 1 - 566
Target Start/End: Original strand, 19605791 - 19606356
Alignment:
| Q |
1 |
agtcttgctatgccaaaatcactcacatgagcaacattgtcttcatcaataaggacattgcttggctttagatcacaatgaaggaccaattgctcacatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| | || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19605791 |
agtcttgctatgccaaaatcactcacatgtgcaacgatatcgtcgtcaataaggacattgcttggctttagatcacaatgaaggaccaattgctcacatt |
19605890 |
T |
|
| Q |
101 |
ctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacattcatcatccttga |
200 |
Q |
| |
|
| ||||||| |||||||||||||||| |||||| | || |||||| | |||||| | || | ||||| |||||| || ||| ||||||| ||| | |
|
|
| T |
19605891 |
catgatgaaggtaatgtaatgcagaagaaacatcgacaaggatatttaatctttgctcaaacttcaatgttcttggatgatctgcattcattgtcccggg |
19605990 |
T |
|
| Q |
201 |
atgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagttaaaatc |
300 |
Q |
| |
|
||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
19605991 |
atgcaaccattgttctaagcttccatttctcatgtactcaaaaactagagctttgaattctagacctttgttatcaatactagaacaacaagttaaaatc |
19606090 |
T |
|
| Q |
301 |
ttaaccagatttcgatgtctaatatttttgagtgcattacattcggtaataaaactcttgggagctccattcttttcaaggtccaggaccttcacagcaa |
400 |
Q |
| |
|
||||| | |||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||| ||||||| |
|
|
| T |
19606091 |
ttaactaaatttcgatgtctaatatttttgagagcattacattcagtaataaaactcttgtgagctcccttcttttcaaggttcaggaccttaacagcaa |
19606190 |
T |
|
| Q |
401 |
taactttatcttctgacataagatttcctttatacaccgaaccaaagcctcctgatccaatcaagtttctagatgagaagccatcagttgcctgatacaa |
500 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||| ||||| ||||||||||| || |
|
|
| T |
19606191 |
taactttatcttctgacataagatttcctttatacacggaaccgaagcctcctgatccaatcaagtttctatccgagaacccatcggttgcctgatataa |
19606290 |
T |
|
| Q |
501 |
gtcttggtaagaaaccatagcaagttggtcaattattggtgaatctgaagatggtttcttgtttct |
566 |
Q |
| |
|
||||||||| |||||||||| | |||||||||| |||||||||||||||||||||| |||||||| |
|
|
| T |
19606291 |
gtcttggtaggaaaccataggtaattggtcaattgttggtgaatctgaagatggttttttgtttct |
19606356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 564
Target Start/End: Complemental strand, 9825367 - 9824819
Alignment:
| Q |
1 |
agtcttgctatgccaaaatcactcacatgagcaacattgtcttcatcaataaggacattgcttggctttagatcacaatgaaggaccaattgctcacatt |
100 |
Q |
| |
|
|||||||| ||||||||||||||| | |||| |||| | |||||||||| ||||| ||| |||||||||| |||||||||||||| ||||||||||| | |
|
|
| T |
9825367 |
agtcttgcaatgccaaaatcactcgcctgagaaacaatatcttcatcaacaaggatattacttggctttatatcacaatgaaggattaattgctcacaat |
9825268 |
T |
|
| Q |
101 |
ctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacattcatcatccttga |
200 |
Q |
| |
|
| |||||||| ||||||||||||||||||||| |||||||| ||||||||||| ||| || |||||||||||| ||||||| |
|
|
| T |
9825267 |
cacgatgaag-----------------caacatcaataatgatattcaatctttgatcaagatccaatgttctaggatgctctacattctctatccttgg |
9825185 |
T |
|
| Q |
201 |
atgcaaccagctttctaagcttcc-atttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagttaaaat |
299 |
Q |
| |
|
|| |||||| |||||||||||| ||||| |||||| ||||||||||||||||||||||| || ||||||||||| ||||||||| |||| |||||||| |
|
|
| T |
9825184 |
attcaaccattgttctaagcttcccattttgcatgtactcaaaaactagagctttgaattcttgccctttgtaatcgatactagaaaaacatgttaaaat |
9825085 |
T |
|
| Q |
300 |
cttaaccagatttcgatgtctaatatttttgagtgcattacattcggtaataaaactcttgggagctccattcttttcaaggtccaggaccttcacagca |
399 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||| || || |||||| | ||| |
|
|
| T |
9825084 |
cttaaccaaatttcgatgtctaatatttttgagttcattacattcggtaataaaactcttgtgagctcccttcttttcaaagttcaagacctttatggca |
9824985 |
T |
|
| Q |
400 |
ataactttatcttctgacataagatttcctttatacac-cgaaccaaagcctcctgatccaatcaagtttctagatgagaagccatcagttgcctgatac |
498 |
Q |
| |
|
||||||||||||||| ||||||||| |||||||||| |||||||||||||| |||||||||||||||||| ||||| |||| ||||||||||| |
|
|
| T |
9824984 |
ataactttatcttctctgataagattttctttatacacaaaaaccaaagcctcctaatccaatcaagtttctagccgagaacccattcgttgcctgatat |
9824885 |
T |
|
| Q |
499 |
aagtcttggtaagaaaccatagcaagttggtcaattattggtgaatctgaagatggtttcttgttt |
564 |
Q |
| |
|
||| ||||||| ||||||||| | |||||||||| | ||||||| |||| ||||| |||||||||| |
|
|
| T |
9824884 |
aaggcttggtaggaaaccatatctagttggtcaactgttggtgattctggagatgatttcttgttt |
9824819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 429
Target Start/End: Original strand, 10763059 - 10763487
Alignment:
| Q |
1 |
agtcttgctatgccaaaatcactcacatgagcaacattgtcttcatcaataaggacattgcttggctttagatcacaatgaaggaccaattgctcacatt |
100 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10763059 |
agtcttgctattccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggctttagatcacaatgaaggaccaattgctcacatt |
10763158 |
T |
|
| Q |
101 |
ctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacattcatcatccttga |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||| |||| |||| | |||| | |
|
|
| T |
10763159 |
ctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgatcaagatccaatgttgttggagtctctgcatttaaattcctagg |
10763258 |
T |
|
| Q |
201 |
atgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagttaaaatc |
300 |
Q |
| |
|
|||| ||| | |||||||||||||||||||||||| |||||||| |||||||| ||||| |||||||| |||||| ||||||||||||| ||||||||| |
|
|
| T |
10763259 |
gtgcagccatcgttctaagcttccatttttcatgtaatcaaaaaccagagctttaaattcttgacctttataatcagtactagaacaacatgttaaaatc |
10763358 |
T |
|
| Q |
301 |
ttaaccagatttcgatgtctaatatttttgagtgcattacattcggtaataaaactcttgggagctccattcttttcaaggtccaggaccttcacagcaa |
400 |
Q |
| |
|
||||| | ||| || ||| ||||||||| |||||||||||||| ||| ||||||||| |||||||||| |||| |||| | ||| || | ||||| |
|
|
| T |
10763359 |
ttaactaaattccggtgttgaatattttttagtgcattacattcaacaatgaaactcttgtgagctccattgttttggaggttgaagacttttatagcaa |
10763458 |
T |
|
| Q |
401 |
taactttatcttctgacataagatttcct |
429 |
Q |
| |
|
|| || |||||||||| |||||||||| |
|
|
| T |
10763459 |
caatattgtcttctgacacaagatttcct |
10763487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 566
Target Start/End: Complemental strand, 7193288 - 7192723
Alignment:
| Q |
1 |
agtcttgctatgccaaaatcactcacatgagcaacattgtcttcatcaataaggacattgcttggctttagatcacaatgaaggaccaattgctcacatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| || |||| |||||||||||||||||||||||||||||||| || | |||||||||||| |
|
|
| T |
7193288 |
agtcttgctatgccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggctttagatcacaatgaatgatcgattgctcacatt |
7193189 |
T |
|
| Q |
101 |
ctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacattca-tcatccttg |
199 |
Q |
| |
|
| ||||||| ||||||||| || | |||| ||||| | |||||||| |||||||| ||| ||||| | |||| | | ||||||||||| | ||| | | |
|
|
| T |
7193188 |
caagatgaaggtaatgtaatacaaaggcaatatcaacagcgatattcaatctttgatcaaggtccaacgttctttgattctctacattcactgatc-tag |
7193090 |
T |
|
| Q |
200 |
aatgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagttaaaat |
299 |
Q |
| |
|
||| | ||| |||||||||||| || |||||||||||||| |||| |||||| ||||| |||||||||||||| |||| |||||||| || ||||| |
|
|
| T |
7193089 |
gatgtagccattgttctaagcttccgttgttcatgtattcaaagactaaagctttaaattcttgacctttgtaatctgtactggaacaacatgtcaaaat |
7192990 |
T |
|
| Q |
300 |
cttaaccagatttcgatgtctaatatttttgagtgcattacattcggtaataaaactcttgggagctccattcttttcaaggtccaggaccttcacagca |
399 |
Q |
| |
|
|||||||| ||||||||||||||||||||| |||||||||||||| | ||| ||||||||| ||||||| ||||||| ||||| || ||||||||| ||| |
|
|
| T |
7192989 |
cttaaccaaatttcgatgtctaatattttttagtgcattacattcagcaatgaaactcttgtgagctcccttcttttgaaggttcatgaccttcacggca |
7192890 |
T |
|
| Q |
400 |
ataactttatcttctgacataagatttcctttatacaccgaaccaaagcctcctgatccaatcaagtttctagatgagaagccatcagttgcctgataca |
499 |
Q |
| |
|
| ||||||||||||||| |||||||||||| ||||| |||||||||| ||||||||||| |||||||||| || || || |||||| |||| | | |
|
|
| T |
7192889 |
acaactttatcttctgattcaagatttcctttgtacacagaaccaaagcttcctgatccaactaagtttctagcagaaaacccgtcagttccctggtgaa |
7192790 |
T |
|
| Q |
500 |
agtcttggtaagaaaccatagcaagttggtcaattattggtgaatctgaagatggtttcttgtttct |
566 |
Q |
| |
|
||| ||||| ||||| |||| ||| ||||||| || || |||| ||| || ||||||||||||| |
|
|
| T |
7192789 |
ggtcctggtatgaaactttagctagtgggtcaatatttagtaaatcagaatattgtttcttgtttct |
7192723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 545
Target Start/End: Complemental strand, 10565310 - 10564766
Alignment:
| Q |
1 |
agtcttgctatgccaaaatcactcacatgagcaacattgtcttcatcaataaggacattgcttggctttagatcacaatgaaggaccaattgctcacatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| || |||| ||||| |||||||||||||||||||||||||| |||||||| ||||||| |
|
|
| T |
10565310 |
agtcttgctatgccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggatattgcttggctttagatcacaatgaatgaccaattcttcacatt |
10565211 |
T |
|
| Q |
101 |
ctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacattcatcatccttga |
200 |
Q |
| |
|
||| |||||||||||||||||||||||||||||| ||||| || | | ||| ||| || ||||||| | |||| | ||| |||| | ||| | |
|
|
| T |
10565210 |
ctctatgaagataatgtaatgcagaagcaacatcgataataatgtataatctatgagcaaagtccaatgttgttgggggttctgcatttaaaatctcagg |
10565111 |
T |
|
| Q |
201 |
atgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagttaaaatc |
300 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| |||||||| |||||||| ||||| |||||||||||||| |||| |||||||| ||||||| | |
|
|
| T |
10565110 |
atgcaaccattgatctaagcttccatttttcatgtactcaaaaaccagagctttaaattcttgacctttgtaatctgtacttgaacaacaggttaaaacc |
10565011 |
T |
|
| Q |
301 |
ttaaccagatttcgatgtctaatatttttgagtgcattacattcggtaataaaactcttgggagctccattcttttcaaggtccaggaccttcacagcaa |
400 |
Q |
| |
|
||||| | |||||| |||| |||||||||||||||||||||||| ||| ||||||||| ||||||| ||||||| |||| ||||||||| || |||| |
|
|
| T |
10565010 |
ttaactaaatttcggtgtcgaatatttttgagtgcattacattcaacaatgaaactcttgtgagctcccttcttttggaggttcaggacctttacggcaa |
10564911 |
T |
|
| Q |
401 |
taactttatcttctgacataagatttcctttatacaccgaaccaaagcctcctgatccaatcaagtttctagatgagaagccatcagttgcctgatacaa |
500 |
Q |
| |
|
||| ||||||||||||| |||||||||||| ||||| |||||| | ||||||||| ||||||||||||| |||||| ||||| ||| | |||| || |
|
|
| T |
10564910 |
caacattatcttctgacacaagatttcctttgtacacaagaccaaaacttcctgatcctatcaagtttctagttgagaacccatcggttccttgatgtaa |
10564811 |
T |
|
| Q |
501 |
gtcttggtaagaaaccatagcaagttggtcaattattggtgaatc |
545 |
Q |
| |
|
|||||||| |||||| ||| ||||| |||| | |||||||||| |
|
|
| T |
10564810 |
ttcttggtacgaaaccttagatagttgatcaactgttggtgaatc |
10564766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 545
Target Start/End: Original strand, 10740625 - 10741169
Alignment:
| Q |
1 |
agtcttgctatgccaaaatcactcacatgagcaacattgtcttcatcaataaggacattgcttggctttagatcacaatgaaggaccaattgctcacatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
10740625 |
agtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggctttagatcacaatgaaggaccaattgttcacatt |
10740724 |
T |
|
| Q |
101 |
ctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacattcatcatccttga |
200 |
Q |
| |
|
|| | ||||||||||||||||||| || ||||| | ||||| || | ||| ||| ||| ||||||| |||||| || ||| |||| | ||| |
|
|
| T |
10740725 |
cttggtgaagataatgtaatgcagtggcgacatcgttcatgatgtttaatctatgaccaaggtccaatgttcttggatgatctgcatttaaaatctcaag |
10740824 |
T |
|
| Q |
201 |
atgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagttaaaatc |
300 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| |||||||| |||||||| || |||||||||||||| ||||||||||||| || |||||| |
|
|
| T |
10740825 |
atgcaaccattgttctaagcttccatttttcatgtaatcaaaaacaagagctttaaaagtttgacctttgtaatctgtactagaacaacatgtcaaaatc |
10740924 |
T |
|
| Q |
301 |
ttaaccagatttcgatgtctaatatttttgagtgcattacattcggtaataaaactcttgggagctccattcttttcaaggtccaggaccttcacagcaa |
400 |
Q |
| |
|
||||| | |||||| ||||||||||||||||||||||||||||| ||| ||||||||| ||||||| ||||||| |||| || |||||| || |||| |
|
|
| T |
10740925 |
ttaactaaatttcggtgtctaatatttttgagtgcattacattcaacaatgaaactcttgtgagctcccttctttttgaggttcaagacctttacggcaa |
10741024 |
T |
|
| Q |
401 |
taactttatcttctgacataagatttcctttatacaccgaaccaaagcctcctgatccaatcaagtttctagatgagaagccatcagttgcctgatacaa |
500 |
Q |
| |
|
||| || ||||||| || |||||||||||| ||||| |||||||| | ||||||||| ||||||||||| |||||| ||||| ||| | | | || |
|
|
| T |
10741025 |
caacattgtcttctgtcacaagatttcctttgtacacagaaccaaaacttcctgatccgatcaagtttctttctgagaacccatcggttcctcggtgtaa |
10741124 |
T |
|
| Q |
501 |
gtcttggtaagaaaccatagcaagttggtcaattattggtgaatc |
545 |
Q |
| |
|
|||||| || |||||| |||| ||||| ||||| |||||||||| |
|
|
| T |
10741125 |
gtcttgatatgaaaccttagctagttgatcaatagttggtgaatc |
10741169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 471
Target Start/End: Complemental strand, 10605035 - 10604565
Alignment:
| Q |
1 |
agtcttgctatgccaaaatcactcacatgagcaacattgtcttcatcaataaggacattgcttggctttagatcacaatgaaggaccaattgctcacatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | || ||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||| |
|
|
| T |
10605035 |
agtcttgctatgccaaaatcactcacatgagcaaccatatcatcatcaagtaggacattgcttggctttagatcacaatgaatgactaattgctcacatt |
10604936 |
T |
|
| Q |
101 |
ctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacattcatcatccttga |
200 |
Q |
| |
|
|| ||||||||||||| ||||||||||||||||||| |||||| || | ||||| | ||| ||||| | | |||| ||||| |||| | ||| | |
|
|
| T |
10604935 |
cttgatgaagataatgcaatgcagaagcaacatcaaaaatgatgttaaatcttttaccaaggtccaacgttgttggaggctctgcatttaaaatctcagg |
10604836 |
T |
|
| Q |
201 |
atgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagttaaaatc |
300 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||| ||||||||||||| ||||||| |
|
|
| T |
10604835 |
atgcaaccattgttctaagcttccatttttcatgtaatcaaaaactagagctttaaattcttgacctttgtaatctgtactagaacaacatgttaaaact |
10604736 |
T |
|
| Q |
301 |
ttaaccagatttcgatgtctaatatttttgagtgcattacattcggtaataaaactcttgggagctccattcttttcaaggtccaggaccttcacagcaa |
400 |
Q |
| |
|
| ||| | ||| || ||||| ||| ||||||||||||||||||| ||| ||| ||||| | ||||| ||||||| |||| ||||||||| ||||||| |
|
|
| T |
10604735 |
tgaactaaattccggtgtcttatagttttgagtgcattacattcaacaatgaaattcttgtgtgctcccttcttttggaggttcaggacctttacagcaa |
10604636 |
T |
|
| Q |
401 |
taactttatcttctgacataagatttcctttatacaccgaaccaaagcctcctgatccaatcaagtttcta |
471 |
Q |
| |
|
|| ||||||||||||| |||||||||| | ||||| |||||||| | |||| ||||||||||||||||| |
|
|
| T |
10604635 |
ctacattatcttctgacacaagatttcctctgtacacagaaccaaaacttcctaatccaatcaagtttcta |
10604565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 5 - 554
Target Start/End: Original strand, 10216679 - 10217228
Alignment:
| Q |
5 |
ttgctatgccaaaatcactcacatgagcaacattgtcttcatcaataaggacattgcttggctttagatcacaatgaaggaccaattgctcacattctcg |
104 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| |||| | ||| |||||||||||||||||||||||||||| | |||||||||||||||| | |
|
|
| T |
10216679 |
ttgctatgccaaaatcactcacatgagcaaccatgtcatcattcagaagaacattgcttggctttagatcacaatgaataatcaattgctcacattcttg |
10216778 |
T |
|
| Q |
105 |
atgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacattcatcatccttgaatgc |
204 |
Q |
| |
|
||| |||||||||||||| ||||||||||| |||||||| || | || ||| ||| ||||||| | |||| |||||| ||| | ||| | |||| |
|
|
| T |
10216779 |
atgcagataatgtaatgccgaagcaacatcgataatgatgtttaacctatgaccaaggtccaatgtttttggatgctctgaatttaaaatctcaggatgc |
10216878 |
T |
|
| Q |
205 |
aaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagttaaaatcttaa |
304 |
Q |
| |
|
||||| |||||||||||||||||||||||| | ||||||||||||||| ||||| ||||||||||| | ||||||||||||| ||||||| ||||| |
|
|
| T |
10216879 |
aaccattgttctaagcttccatttttcatgtaataaaaaactagagctttaaattcttgacctttgtagtttgtactagaacaacatgttaaaaccttaa |
10216978 |
T |
|
| Q |
305 |
ccagatttcgatgtctaatatttttgagtgcattacattcggtaataaaactcttgggagctccattcttttcaaggtccaggaccttcacagcaataac |
404 |
Q |
| |
|
| ||||| |||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| |||| |||||||||||||||| ||| |
|
|
| T |
10216979 |
ctgagtttcggtgtctaatgtttttgagtgcattacattcaacaataaaactcttgctagctccattcttttggaggtttaggaccttcacagcaacaac |
10217078 |
T |
|
| Q |
405 |
tttatcttctgacataagatttcctttatacaccgaaccaaagcctcctgatccaatcaagtttctagatgagaagccatcagttgcctgatacaagtct |
504 |
Q |
| |
|
||| ||||||||| |||||| || ||||||| ||||||| | ||||||||||||||||||| || ||||| ||||||||| | |||| |||||| |
|
|
| T |
10217079 |
attaacttctgacacaagattcccgctatacacacaaccaaaacttcctgatccaatcaagtttttatccgagaacccatcagttccttgatgtaagtct |
10217178 |
T |
|
| Q |
505 |
tggtaagaaaccatagcaagttggtcaattattggtgaatctgaagatgg |
554 |
Q |
| |
|
||||| ||||| |||| ||||| || ||| |||||||||| ||||||| |
|
|
| T |
10217179 |
tggtatgaaactttagctagttgatcgattgttggtgaatcaaaagatgg |
10217228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 1 - 566
Target Start/End: Original strand, 10588356 - 10588921
Alignment:
| Q |
1 |
agtcttgctatgccaaaatcactcacatgagcaacattgtcttcatcaataaggacattgcttggctttagatcacaatgaaggaccaattgctcacatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| || |||| |||||| ||||||||||||| ||||||||||||||||| |||||||||| |
|
|
| T |
10588356 |
agtcttgctatgccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacgttgcttggctttatatcacaatgaaggaccacctgctcacatt |
10588455 |
T |
|
| Q |
101 |
ctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacattcatcatccttga |
200 |
Q |
| |
|
| ||||||||||||||| ||||||||||| ||| ||| ||||||| | ||| ||| ||| ||||| | |||||| |||||| ||||| ||| || |
|
|
| T |
10588456 |
catgatgaagataatgtagtgcagaagcaatatcgatagtgatatttaatctatgaacaaggtccaacgttcttggatgctctgaattcacattccatgg |
10588555 |
T |
|
| Q |
201 |
atgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagttaaaatc |
300 |
Q |
| |
|
||| | ||| |||||| ||||||||||||||||| |||||||||| |||||| ||||| |||||||| |||||| ||| ||||||||| ||||||||| |
|
|
| T |
10588556 |
atgaagccattgttctaaacttccatttttcatgtaatcaaaaactaaagctttaaattcttgacctttataatcagtaccagaacaacatgttaaaatc |
10588655 |
T |
|
| Q |
301 |
ttaaccagatttcgatgtctaatatttttgagtgcattacattcggtaataaaactcttgggagctccattcttttcaaggtccaggaccttcacagcaa |
400 |
Q |
| |
|
|| ||| |||||||||||||| ||| ||||||||||||||||||| |||||||||||| |||||| ||||||| ||||| ||| ||||| | ||||| |
|
|
| T |
10588656 |
ttggccaaatttcgatgtctaacattcttgagtgcattacattcggcaataaaactcttatcagctcccttctttttaaggttcagaaccttgatagcaa |
10588755 |
T |
|
| Q |
401 |
taactttatcttctgacataagatttcctttatacaccgaaccaaagcctcctgatccaatcaagtttctagatgagaagccatcagttgcctgatacaa |
500 |
Q |
| |
|
| |||||||| ||| | ||| ||||||| || || |||| ||| | |||||||||||||||||||| | |||||| ||||||||| | |||| | |
|
|
| T |
10588756 |
cagatttatcttgtgatacgagaattcctttgtatacggaacaaaaacttcctgatccaatcaagtttccatctgagaatccatcagttccttgatgtag |
10588855 |
T |
|
| Q |
501 |
gtcttggtaagaaaccatagcaagttggtcaattattggtgaatctgaagatggtttcttgtttct |
566 |
Q |
| |
|
|||||||| |||||| || | || |||||| || | |||| ||| |||||| |||| ||||||| |
|
|
| T |
10588856 |
ttcttggtatgaaaccttaactagctggtcagttgtaggtgtatcagaagataatttcatgtttct |
10588921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 1 - 485
Target Start/End: Complemental strand, 10611993 - 10611509
Alignment:
| Q |
1 |
agtcttgctatgccaaaatcactcacatgagcaacattgtcttcatcaataaggacattgcttggctttagatcacaatgaaggaccaattgctcacatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| | || ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
10611993 |
agtcttgctatgccaaaatcactcacatgtgcaaccatatcatcatcaagtaggacattgcttggctttatatcacaatgaaggaccaattgctcacatt |
10611894 |
T |
|
| Q |
101 |
ctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacattcatcatccttga |
200 |
Q |
| |
|
| |||||||||||||||||||||| ||||||| |||||||| || | ||| ||| | || ||||||| | || |||||| |||| | | | | | |
|
|
| T |
10611893 |
cattatgaagataatgtaatgcagaaccaacatccataatgatgtttaatctatgactgaggtccaatgttgctgtatgctcttcatttaaaaccttggg |
10611794 |
T |
|
| Q |
201 |
atgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagttaaaatc |
300 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| ||||||||||| ||||| ||||| |||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
10611793 |
atgcaaccattgttctaagcttccatttttcatgtaatcaaaaactagggctttaaattcttgacctttgtaatctgtactagaacaacatgttaaaatc |
10611694 |
T |
|
| Q |
301 |
ttaaccagatttcgatgtctaatatttttgagtgcattacattcggtaataaaactcttgggagctccattcttttcaaggtccaggaccttcacagcaa |
400 |
Q |
| |
|
||||| | |||||| ||||||||| ||| |||||||||||||| ||| ||||||||| |||||||||| |||| |||| | |||||| | ||||| |
|
|
| T |
10611693 |
ttaactaaatttcggtgtctaataaattttagtgcattacattcaacaatgaaactcttgtgagctccattgttttggaggttgaagacctttatagcaa |
10611594 |
T |
|
| Q |
401 |
taactttatcttctgacataagatttcctttatacaccgaaccaaagcctcctgatccaatcaagtttctagatgagaagccatc |
485 |
Q |
| |
|
||| || |||||||||| |||||||||| | ||||| |||||| | ||||||||| |||||||||||| |||||| ||||| |
|
|
| T |
10611593 |
caacattgtcttctgacacaagatttcctctgtacacatcaccaaaacttcctgatccgatcaagtttctatctgagaacccatc |
10611509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 5 - 566
Target Start/End: Original strand, 10716870 - 10717431
Alignment:
| Q |
5 |
ttgctatgccaaaatcactcacatgagcaacattgtcttcatcaataaggacattgcttggctttagatcacaatgaaggaccaattgctcacattctcg |
104 |
Q |
| |
|
||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||||||||||| ||||||||||||| || ||||| ||||||||| | |
|
|
| T |
10716870 |
ttgctatgccaaaatcagtcacatgagcaaccatgtcatcatcaagaaggacattgcttggcttaagatcacaatgaatgattaattgttcacattcttg |
10716969 |
T |
|
| Q |
105 |
atgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacattcatcatccttgaatgc |
204 |
Q |
| |
|
||||||||||||||||||| || ||||| || ||||| || | ||| ||| ||| ||||||| |||||| || ||| |||| | ||| |||| |
|
|
| T |
10716970 |
gtgaagataatgtaatgcagtggcgacatcgatcatgatgtttaatctatgaccaaggtccaatgttcttggatgatctgcatttaaaatctcaagatgc |
10717069 |
T |
|
| Q |
205 |
aaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagttaaaatcttaa |
304 |
Q |
| |
|
||||| |||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||| ||||||||||||| ||||| ||||| | |
|
|
| T |
10717070 |
aaccattgttctaagcttccatttttcatgtaatcaaaaactagagctttaaaagtttgacctttgtaatctgtactagaacaacatgttaatatcttca |
10717169 |
T |
|
| Q |
305 |
ccagatttcgatgtctaatatttttgagtgcattacattcggtaataaaactcttgggagctccattcttttcaaggtccaggaccttcacagcaataac |
404 |
Q |
| |
|
| |||||||| ||||| |||||||| |||||||||||||| ||| ||||||||| ||||||| ||||||| |||| || |||||| || |||| ||| |
|
|
| T |
10717170 |
ctagatttcggtgtctgatattttttagtgcattacattcaacaatgaaactcttgtgagctcccttctttttgaggttcaagacctttacggcaacaac |
10717269 |
T |
|
| Q |
405 |
tttatcttctgacataagatttcctttatacaccgaaccaaagcctcctgatccaatcaagtttctagatgagaagccatcagttgcctgatacaagtct |
504 |
Q |
| |
|
|| |||||||||| |||||||||||| ||||| |||||||| | ||||||||||||||||||||| |||||| ||||| ||| | | | |||||| |
|
|
| T |
10717270 |
attgtcttctgacacaagatttcctttgtacacagaaccaaaacttcctgatccaatcaagtttctttctgagaacccatcggttcctcggtgtaagtct |
10717369 |
T |
|
| Q |
505 |
tggtaagaaaccatagcaagttggtcaattattggtgaatctgaagatggtttcttgtttct |
566 |
Q |
| |
|
|| || |||||| |||| ||||| ||||| |||||||||| | |||||||| | |||||| |
|
|
| T |
10717370 |
tgatatgaaaccttagctagttgatcaatagttggtgaatcaaaggatggtttttggtttct |
10717431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 170; E-Value: 6e-91
Query Start/End: Original strand, 5 - 566
Target Start/End: Original strand, 11048587 - 11049148
Alignment:
| Q |
5 |
ttgctatgccaaaatcactcacatgagcaacattgtcttcatcaataaggacattgcttggctttagatcacaatgaaggaccaattgctcacattctcg |
104 |
Q |
| |
|
|||| |||||||||||||||||||||||||| |||| || | || ||| ||||| |||||||||||||||||||||| | |||||||||||||||| | |
|
|
| T |
11048587 |
ttgcaatgccaaaatcactcacatgagcaaccatgtcgtcgttaagaagaacattacttggctttagatcacaatgaataatcaattgctcacattcttg |
11048686 |
T |
|
| Q |
105 |
atgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacattcatcatccttgaatgc |
204 |
Q |
| |
|
||| |||||||||||||||||||||||||| |||||||| || | || | | ||| ||||||| | |||| |||||| ||| | ||| | ||| |
|
|
| T |
11048687 |
atgcagataatgtaatgcagaagcaacatcgataatgatgtttaacctatcaccaaggtccaatgtttttggatgctctgaatttaaaatctcaggatgt |
11048786 |
T |
|
| Q |
205 |
aaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagttaaaatcttaa |
304 |
Q |
| |
|
||||| |||||||||||||||||||||||| ||||||||||| ||||| ||||| | |||||||||||| ||||||||||||| ||||||| ||||| |
|
|
| T |
11048787 |
aaccattgttctaagcttccatttttcatgtaatcaaaaactagtgctttaaattcttcacctttgtaatctgtactagaacaacaggttaaaaccttaa |
11048886 |
T |
|
| Q |
305 |
ccagatttcgatgtctaatatttttgagtgcattacattcggtaataaaactcttgggagctccattcttttcaaggtccaggaccttcacagcaataac |
404 |
Q |
| |
|
| | ||||| |||||||| |||||||||||||||||||| ||| ||||||||| ||||||||| |||| |||| | ||| |||||||||| ||| |
|
|
| T |
11048887 |
ctaagtttcggtgtctaatgtttttgagtgcattacattcaacaatgaaactcttgctagctccattgttttggaggttgaagactttcacagcaacaac |
11048986 |
T |
|
| Q |
405 |
tttatcttctgacataagatttcctttatacaccgaaccaaagcctcctgatccaatcaagtttctagatgagaagccatcagttgcctgatacaagtct |
504 |
Q |
| |
|
||| |||| |||| |||||||||| | ||||| ||||| || ||||||||||||||||||||| || |||||| ||||| ||| | |||| || ||| |
|
|
| T |
11048987 |
attaccttccgacacaagatttcctctgtacacagaaccgaaacctcctgatccaatcaagtttttatctgagaatccatcggttccttgatgtaaatct |
11049086 |
T |
|
| Q |
505 |
tggtaagaaaccatagcaagttggtcaattattggtgaatctgaagatggtttcttgtttct |
566 |
Q |
| |
|
||||| ||||| || | ||||| |||||| |||||||||| |||||||||| | |||||| |
|
|
| T |
11049087 |
tggtatgaaactttatctagttgatcaattgttggtgaatcaaaagatggtttttggtttct |
11049148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 5 - 545
Target Start/End: Original strand, 10746945 - 10747485
Alignment:
| Q |
5 |
ttgctatgccaaaatcactcacatgagcaacattgtcttcatcaataaggacattgcttggctttagatcacaatgaaggaccaattgctcacattctcg |
104 |
Q |
| |
|
||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||||||||||| |||||||| |||| ||| ||||||||||||||| | |
|
|
| T |
10746945 |
ttgctatgccaaaatcagtcacatgagcaaccatgtcatcatcaagaaggacattgcttggcttgagatcacagtgaatgactaattgctcacattcttg |
10747044 |
T |
|
| Q |
105 |
atgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacattcatcatccttgaatgc |
204 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||| || | ||| || ||| || || | | |||| |||||| |||| | | | | |||| |
|
|
| T |
10747045 |
gtgaagataatgtaatgttgaagcaacatcgataatgatgtttaatctgtggccaaggtctaacgtttttggatgctcttcatttaaaaactcaggatgc |
10747144 |
T |
|
| Q |
205 |
aaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagttaaaatcttaa |
304 |
Q |
| |
|
||||| |||||||||||||||||| ||||| | ||||||||||||||| || |||||| |||||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
10747145 |
aaccattgttctaagcttccattttttatgtaataaaaaactagagctttaaactcctgaactttgtaatctatactagaacaacacgttaaaatcttaa |
10747244 |
T |
|
| Q |
305 |
ccagatttcgatgtctaatatttttgagtgcattacattcggtaataaaactcttgggagctccattcttttcaaggtccaggaccttcacagcaataac |
404 |
Q |
| |
|
| | |||||| |||||||| || |||||| |||||||||| ||| ||||||||| ||||||| ||||||| ||||| ||||| || || |||| | | |
|
|
| T |
10747245 |
ctaaatttcggtgtctaatgttcttgagtacattacattcaacaatgaaactcttgtgagctcccttcttttgaaggtttaggacttttacggcaacagc |
10747344 |
T |
|
| Q |
405 |
tttatcttctgacataagatttcctttatacaccgaaccaaagcctcctgatccaatcaagtttctagatgagaagccatcagttgcctgatacaagtct |
504 |
Q |
| |
|
|||| ||| |||| |||||||||||| ||||| |||||||| | ||||||||| |||||||||||| |||||| || | ||| | |||| |||||| |
|
|
| T |
10747345 |
attattttcggacacaagatttcctttgtacactgaaccaaaacttcctgatccgatcaagtttctacttgagaaaccgtttgttccatgatgtaagtct |
10747444 |
T |
|
| Q |
505 |
tggtaagaaaccatagcaagttggtcaattattggtgaatc |
545 |
Q |
| |
|
||||| ||||| |||| ||||| |||||| | |||||||| |
|
|
| T |
10747445 |
tggtatgaaactgtagctagttgatcaattgtaggtgaatc |
10747485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 1 - 489
Target Start/End: Original strand, 9836254 - 9836742
Alignment:
| Q |
1 |
agtcttgctatgccaaaatcactcacatgagcaacattgtcttcatcaataaggacattgcttggctttagatcacaatgaaggaccaattgctcacatt |
100 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||| ||| ||||| | ||||| ||||||||||| | ||||||||||| ||||| ||||||||||| |
|
|
| T |
9836254 |
agtcttgctatgccaaaatcactcacgtgagcaaccatgttatcatcgagaaggatgttgcttggcttgatatcacaatgaatgaccacttgctcacatt |
9836353 |
T |
|
| Q |
101 |
ctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacattcatcatccttga |
200 |
Q |
| |
|
| | |||||||||||||||||||||||||| |||||| |||||| ||||||||| ||| | ||||| ||| || | |||| || || ||| | |
|
|
| T |
9836354 |
cacaatgaagataatgtaatgcagaagcaatatcaatggagatatttagtctttgaacaaggttcaatgttctaggatactctgaatccactgtccaggg |
9836453 |
T |
|
| Q |
201 |
atgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagttaaaatc |
300 |
Q |
| |
|
|| | ||| |||||||||||||||||||||||| |||||||||| |||||| ||||| |||||| |||||||||||||||||||| |||| || | |
|
|
| T |
9836454 |
ataaagccattgttctaagcttccatttttcatgtaatcaaaaactaaagctttaaattctccacctttataatcaatactagaacaacatgttataacc |
9836553 |
T |
|
| Q |
301 |
ttaaccagatttcgatgtctaatatttttgagtgcattacattcggtaataaaactcttgggagctccattcttttcaaggtccaggaccttcacagcaa |
400 |
Q |
| |
|
|| |||| |||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||| ||||||| |||| ||| ||||| | ||||| |
|
|
| T |
9836554 |
ttgaccaaatttcgatgtctaatatttttgagtgcattacattcagcaataaaactcttatgagctcccttctttttgaggttcagaacctttatagcaa |
9836653 |
T |
|
| Q |
401 |
taactttatcttctgacataagatttcctttatacaccgaaccaaagcctcctgatccaatcaagtttctagatgagaagccatcagtt |
489 |
Q |
| |
|
||||||||||| ||| | || ||||||||| || || | |||||| | ||||||||||||||| |||||| |||||| |||||||| |
|
|
| T |
9836654 |
caactttatcttgtgatacaatatttcctttgtatacggtaccaaaacttcctgatccaatcaaatttctatctgagaactcatcagtt |
9836742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 1 - 540
Target Start/End: Original strand, 10652128 - 10652667
Alignment:
| Q |
1 |
agtcttgctatgccaaaatcactcacatgagcaacattgtcttcatcaataaggacattgcttggctttagatcacaatgaaggaccaattgctcacatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||| |||||||||||||||||||||| |||| ||||||||||| |
|
|
| T |
10652128 |
agtcttgctatgccaaaatcactcacatgagcaaccatgtcgtcatcaagaaggacattacttggctttagatcacaatgaatgaccgcttgctcacatt |
10652227 |
T |
|
| Q |
101 |
ctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacattcatcatccttga |
200 |
Q |
| |
|
| ||||||| ||||||||| ||||||||| |||| |||||||||||||| ||||| ||| ||||| |||| | | || ||||||| || | || |
|
|
| T |
10652228 |
catgatgaaggtaatgtaatacagaagcaatgtcaacaatgatattcagtcgttgatcaaggtccaacattctttgaatccctgcattcattatacctgg |
10652327 |
T |
|
| Q |
201 |
atgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagttaaaatc |
300 |
Q |
| |
|
||| | ||| ||||| | |||| || |||||||||||||| |||| ||| || || || |||||||||||||| |||| |||||||| || |||| | |
|
|
| T |
10652328 |
atgtagccattgttctaggtttccgttgttcatgtattcaaacactaaagccttaaactcttgacctttgtaatcggtactcgaacaacatgtcaaaacc |
10652427 |
T |
|
| Q |
301 |
ttaaccagatttcgatgtctaatatttttgagtgcattacattcggtaataaaactcttgggagctccattcttttcaaggtccaggaccttcacagcaa |
400 |
Q |
| |
|
||||||| ||||| ||| || |||||||| |||||||||||||| || || |||||| ||| ||| || |||| ||||| ||||||||| | |||| |
|
|
| T |
10652428 |
ttaaccaaatttctatgcctcatattttttagtgcattacattcaacaacgaagctcttgtgagatccctttttttgaaggttcaggacctttatggcaa |
10652527 |
T |
|
| Q |
401 |
taactttatcttctgacataagatttcctttatacaccgaaccaaagcctcctgatccaatcaagtttctagatgagaagccatcagttgcctgatacaa |
500 |
Q |
| |
|
||||||||||||||| |||||||||||| ||||| |||||||| | |||| |||||| || |||||||| || || ||||||||| | || | | |
|
|
| T |
10652528 |
caactttatcttctgatgcaagatttcctttgtacacagaaccaaaacttcctaatccaaccaggtttctagcagaaaatccatcagttccttggtgaag |
10652627 |
T |
|
| Q |
501 |
gtcttggtaagaaaccatagcaagttggtcaattattggt |
540 |
Q |
| |
|
||||| ||| |||||| ||||||| |||||||||||||| |
|
|
| T |
10652628 |
gtctttgtatgaaaccctagcaagcgggtcaattattggt |
10652667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 213 - 564
Target Start/End: Original strand, 9850838 - 9851196
Alignment:
| Q |
213 |
ttctaagcttccatttttcatgtattcaaaaactagagcttt-gaattcctgacctttgtaatcaatactagaacaacaagttaaaatcttaaccagatt |
311 |
Q |
| |
|
|||||||||||||||| ||||||| | ||||||||||||||| |||||| || ||||||||||| |||||||||||| |||||||||||||||||| ||| |
|
|
| T |
9850838 |
ttctaagcttccatttatcatgtactaaaaaactagagcttttgaattcatgccctttgtaatcgatactagaacaagaagttaaaatcttaaccaaatt |
9850937 |
T |
|
| Q |
312 |
tcgatgtctaatatttttgagtgcattacattcggtaataaaactcttgggagctcc--attcttttcaaggtccaggaccttcacagcaataactttat |
409 |
Q |
| |
|
||||||||||||| ||||||| ||||||||||| ||||||||||||||| || |||| || |||||||||| || |||||| | | ||||| ||||| |
|
|
| T |
9850938 |
tcgatgtctaata-ttttgagggcattacattccgtaataaaactcttgtgaactccctttttttttcaaggttcaagacctttatggaaataattttat |
9851036 |
T |
|
| Q |
410 |
cttctgacataagatttcctttatacaccgaaccaaagcctcctgatccaatcaagtttctagatgagaagccatcag-----ttgcctgatacaagtct |
504 |
Q |
| |
|
||||| | | || ||||||||||||| ||||||||||||| | |||||||||||||||||| |||||| |||| | ||||||||||||||||| |
|
|
| T |
9851037 |
cttctctgacaggaattcctttatacacagaaccaaagcctcttaatccaatcaagtttctagctgagaacccattggttgccttgcctgatacaagtct |
9851136 |
T |
|
| Q |
505 |
tggtaagaaaccatagcaagttggtcaattattggtgaatctgaagatggtttcttgttt |
564 |
Q |
| |
|
||||||||||||||| | |||||||||| | ||||||||| ||||| | |||||||||| |
|
|
| T |
9851137 |
tggtaagaaaccatatctagttggtcaactgttggtgaatatgaagtagatttcttgttt |
9851196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 1 - 489
Target Start/End: Original strand, 10660011 - 10660499
Alignment:
| Q |
1 |
agtcttgctatgccaaaatcactcacatgagcaacattgtcttcatcaataaggacattgcttggctttagatcacaatgaaggaccaattgctcacatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| || |||| ||||||||| |||||||||||||||||||||| |||| ||||||||||| |
|
|
| T |
10660011 |
agtcttgctatgccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacattacttggctttagatcacaatgaatgaccgcttgctcacatt |
10660110 |
T |
|
| Q |
101 |
ctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacattcatcatccttga |
200 |
Q |
| |
|
| ||||||| ||||||||| || ||||| |||| |||||||||||||| ||||| ||| ||||| |||| | | || ||||||| || | || |
|
|
| T |
10660111 |
cgtgatgaaggtaatgtaatacactagcaatgtcaacaatgatattcagtcgttgatcaaggtccaacaatctttgaatccctgcattcattatacctgg |
10660210 |
T |
|
| Q |
201 |
atgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagttaaaatc |
300 |
Q |
| |
|
||| | ||| ||||| ||||||||| |||||||||||||| |||| ||| || || || |||||||||||||| |||| |||||||| || |||| | |
|
|
| T |
10660211 |
atgtagccattgttctaggcttccattgttcatgtattcaaacactaaagccttaaactcttgacctttgtaatctgtacttgaacaacatgtcaaaacc |
10660310 |
T |
|
| Q |
301 |
ttaaccagatttcgatgtctaatatttttgagtgcattacattcggtaataaaactcttgggagctccattcttttcaaggtccaggaccttcacagcaa |
400 |
Q |
| |
|
|| |||| ||||| ||| || |||||||| |||||||||||||| ||| || |||||| ||||||| || |||| ||||| ||| ||||| | |||| |
|
|
| T |
10660311 |
ttgaccaaatttctatgcctcatattttttagtgcattacattcaacaatgaagctcttgtgagctcccttattttgaaggttcagaacctttatggcaa |
10660410 |
T |
|
| Q |
401 |
taactttatcttctgacataagatttcctttatacaccgaaccaaagcctcctgatccaatcaagtttctagatgagaagccatcagtt |
489 |
Q |
| |
|
|| |||||||||||| |||||||||||| || || |||||||| |||||| |||||| | |||||||| || || ||||||||| |
|
|
| T |
10660411 |
caaatttatcttctgatgcaagatttcctttgtagacagaaccaaaacctcctaatccaacaaggtttctagcagaaaatccatcagtt |
10660499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 1 - 489
Target Start/End: Complemental strand, 10581279 - 10580786
Alignment:
| Q |
1 |
agtcttgctatgccaaaatcactcacatgagcaacattgtcttcatcaataaggacattgcttggctttagatcacaatgaaggaccaattgctcacatt |
100 |
Q |
| |
|
||||||||| |||||||||||||||||||| || |||| ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
10581279 |
agtcttgctgtgccaaaatcactcacatgacca----tgtcatcatcaagaagtg---tgcttggctttagatcacaacgaaggaccaattgctcacatt |
10581187 |
T |
|
| Q |
101 |
ctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacattcatcatccttga |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||| || | ||| ||| ||| | ||||| | || | | ||| || | | ||| | |
|
|
| T |
10581186 |
ctcgatgaagataatgtaatgcagaagcaacatccataatgatgtttaatctatgaccaaggttcaatgttgttagaggttctgcacttaa-atctgagg |
10581088 |
T |
|
| Q |
201 |
atgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagttaaaatc |
300 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| | |||||||| |||||| ||||| || |||||||||| ||||||||||||| |||| || | |
|
|
| T |
10581087 |
atgcaaccattgttctaagcttccatttttcatgtaataaaaaactaaagctttaaattcttggcctttgtaatttgtactagaacaacatgttagaacc |
10580988 |
T |
|
| Q |
301 |
ttaaccagatttcgatgtctaatatttttgagtgcattacattcggtaataaaactcttgggagctccattcttttcaaggtccaggaccttcac----- |
395 |
Q |
| |
|
|| || | |||| | ||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||| |||| || |||||| || |
|
|
| T |
10580987 |
ttgactaaattttggtgtctaatatttttgagtgcattacattcaacaataaaactcttgtgagctcctttcttttggaggttcaagacctttactgcaa |
10580888 |
T |
|
| Q |
396 |
--------agcaataactttatcttctgacataagatttcctttatacaccgaaccaaagcctcctgatccaatcaagtttctagatgagaagccatcag |
487 |
Q |
| |
|
|||| ||| ||||||||||||| |||||||||||| ||||| |||||||| | |||||| || |||| ||||||| ||||| ||||||| |
|
|
| T |
10580887 |
caacattatgcaacaacattatcttctgacacaagatttcctttgtacacggaaccaaaacttcctgacccgatcatgtttctatccgagaacccatcag |
10580788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 201 - 382
Target Start/End: Complemental strand, 10550867 - 10550686
Alignment:
| Q |
201 |
atgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagttaaaatc |
300 |
Q |
| |
|
||||||||| |||||||| |||||||| ||||||| ||||| || |||||||| || || ||||||||||| | || ||||||||||| ||||| |
|
|
| T |
10550867 |
atgcaaccaattttctaagtttccatttctcatgtactcaaatacaagagctttaaactcacttcctttgtaatctgtgctggaacaacaagtcaaaatt |
10550768 |
T |
|
| Q |
301 |
ttaaccagatttcgatgtctaatatttttgagtgcattacattcggtaataaaactcttgggagctccattcttttcaaggt |
382 |
Q |
| |
|
||||| ||||||| || ||||||||||| |||||||||||||| | ||| ||||||||| || |||| ||||||| ||||| |
|
|
| T |
10550767 |
ttaactagatttctgtgcctaatattttttagtgcattacattcagcaatgaaactcttgtgaactcccttctttttaaggt |
10550686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 9849930 - 9849983
Alignment:
| Q |
136 |
ataatgatattcagtctttgattaagatccaatgctcttggttgctctacattc |
189 |
Q |
| |
|
||||||||||||| |||||||| |||||| |||| | |||| |||||||||||| |
|
|
| T |
9849930 |
ataatgatattcaatctttgatcaagatcaaatgttgttggatgctctacattc |
9849983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 311
Target Start/End: Complemental strand, 35754910 - 35754837
Alignment:
| Q |
238 |
tcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagttaaaatcttaaccagatt |
311 |
Q |
| |
|
|||||||| | ||||||||| || | ||| || ||||||| ||| |||||||||||||||||||| || ||||| |
|
|
| T |
35754910 |
tcaaaaacaatagctttgaaatcttcaccattataatcaacacttgaacaacaagttaaaatcttgacaagatt |
35754837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 177; Significance: 4e-95; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 1 - 545
Target Start/End: Complemental strand, 12932562 - 12932018
Alignment:
| Q |
1 |
agtcttgctatgccaaaatcactcacatgagcaacattgtcttcatcaataaggacattgcttggctttagatcacaatgaaggaccaattgctcacatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||| ||||||||||||||||||| || |||||||||| |
|
|
| T |
12932562 |
agtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggttttagatcacaatgaaggattaactgctcacatt |
12932463 |
T |
|
| Q |
101 |
ctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacattcatcatccttga |
200 |
Q |
| |
|
|||||||||| ||||| ||||||||||||||||| || ||||| || | ||| ||| ||| | ||||| | |||| | | | |||||| || | |
|
|
| T |
12932462 |
ctcgatgaaggtaatgcaatgcagaagcaacatcgatgatgatgtttaatctatgaccaaggttcaatgttgttggaggatttgcattcaaagtctcagg |
12932363 |
T |
|
| Q |
201 |
atgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagttaaaatc |
300 |
Q |
| |
|
||| ||||| |||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||| | ||||||||||| ||||||| | |
|
|
| T |
12932362 |
atgtaaccactgttctaagcttccatttttcatgtattcaaaaactagtgctttaaattcttgacctttgtaatttgtgctagaacaacatgttaaaacc |
12932263 |
T |
|
| Q |
301 |
ttaaccagatttcgatgtctaatatttttgagtgcattacattcggtaataaaactcttgggagctccattcttttcaaggtccaggaccttcacagcaa |
400 |
Q |
| |
|
||||||| |||||| |||||||||||||||||||| |||||||| ||| ||||||||| ||||||| || |||| || | || |||||| || |||| |
|
|
| T |
12932262 |
ttaaccaaatttcggtgtctaatatttttgagtgcgttacattcaacaatgaaactcttgtgagctccctttttttgcagattcaagacctttactgcaa |
12932163 |
T |
|
| Q |
401 |
taactttatcttctgacataagatttcctttatacaccgaaccaaagcctcctgatccaatcaagtttctagatgagaagccatcagttgcctgatacaa |
500 |
Q |
| |
|
||| ||||||||||||| | ||||||||| || || |||||||| | ||||||||| |||| ||||||| |||||| ||||| ||| | || || |
|
|
| T |
12932162 |
caacattatcttctgacactatatttcctttgtaaacggaaccaaaacttcctgatccgatcatgtttctatttgagaatccatcggttccaacatgtaa |
12932063 |
T |
|
| Q |
501 |
gtcttggtaagaaaccatagcaagttggtcaattattggtgaatc |
545 |
Q |
| |
|
|||||||| |||||| |||| ||||| |||||| |||||||||| |
|
|
| T |
12932062 |
ttcttggtatgaaaccttagctagttgatcaattgttggtgaatc |
12932018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 1 - 485
Target Start/End: Complemental strand, 12899853 - 12899369
Alignment:
| Q |
1 |
agtcttgctatgccaaaatcactcacatgagcaacattgtcttcatcaataaggacattgcttggctttagatcacaatgaaggaccaattgctcacatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||| ||||||||||| ||| ||||||||||||| |
|
|
| T |
12899853 |
agtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggctttatatcacaatgaaagactaattgctcacatt |
12899754 |
T |
|
| Q |
101 |
ctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacattcatcatccttga |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| || ||||| || | ||| ||| ||| | ||||| | |||| | | | |||||| || | |
|
|
| T |
12899753 |
ctcgatgaagataatgtaatgcagaagcaacatcgatgatgatgtttaatctatgaccaaggttcaatgttgttggaggatttgcattcaaagtctcggg |
12899654 |
T |
|
| Q |
201 |
atgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagttaaaatc |
300 |
Q |
| |
|
||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| | ||||||||||| ||||||| | |
|
|
| T |
12899653 |
atgtaaccattgttctaagcttccatttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaacaacatgttaaaacc |
12899554 |
T |
|
| Q |
301 |
ttaaccagatttcgatgtctaatatttttgagtgcattacattcggtaataaaactcttgggagctccattcttttcaaggtccaggaccttcacagcaa |
400 |
Q |
| |
|
||||||| |||||| |||| ||| |||||||||||||||||||| ||| ||||||||| |||| || || |||| || | || |||||| || |||| |
|
|
| T |
12899553 |
ttaaccaaatttcggtgtcgaatgtttttgagtgcattacattctaaaatgaaactcttgtgagcaccctttttttgcagattcaagacctttactgcaa |
12899454 |
T |
|
| Q |
401 |
taactttatcttctgacataagatttcctttatacaccgaaccaaagcctcctgatccaatcaagtttctagatgagaagccatc |
485 |
Q |
| |
|
||| ||||||||||| | | ||||||| | || || |||||||| | ||||||||| |||||||||||| |||||| ||||| |
|
|
| T |
12899453 |
caacattatcttctgaaactatatttcctctgtatacggaaccaaaacttcctgatccgatcaagtttctatctgagaatccatc |
12899369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 1 - 545
Target Start/End: Complemental strand, 12948927 - 12948383
Alignment:
| Q |
1 |
agtcttgctatgccaaaatcactcacatgagcaacattgtcttcatcaataaggacattgcttggctttagatcacaatgaaggaccaattgctcacatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||| |
|
|
| T |
12948927 |
agtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggttttagatcacaatgaaggactaattgctcacatt |
12948828 |
T |
|
| Q |
101 |
ctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacattcatcatccttga |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||| || | ||| || ||| | ||||| | |||| | | | |||||| || | |
|
|
| T |
12948827 |
atcgatgaagataatgtaatgcagaagcaacatcgataatgatgtttaatctacgacgaaggttcaatgttgttggaggatttgcattcaaagtctcagg |
12948728 |
T |
|
| Q |
201 |
atgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagttaaaatc |
300 |
Q |
| |
|
||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||| || | ||||||||||| ||||||| | |
|
|
| T |
12948727 |
atgtaaccactgttctaagcttccatttttcatgtattcaaaaactagagctttaaattcttggcctttgttatttgtgctagaacaacatgttaaaacc |
12948628 |
T |
|
| Q |
301 |
ttaaccagatttcgatgtctaatatttttgagtgcattacattcggtaataaaactcttgggagctccattcttttcaaggtccaggaccttcacagcaa |
400 |
Q |
| |
|
||||||| |||||| |||||||||||||| |||||||||||||| ||| ||||||||| ||||||| || || | |||| || ||| || || |||| |
|
|
| T |
12948627 |
ttaaccaaatttcggtgtctaatattttttagtgcattacattcaacaatgaaactcttgtgagctccctttttctggaggttcaagacttttactgcaa |
12948528 |
T |
|
| Q |
401 |
taactttatcttctgacataagatttcctttatacaccgaaccaaagcctcctgatccaatcaagtttctagatgagaagccatcagttgcctgatacaa |
500 |
Q |
| |
|
||| ||||||||||| | || ||||||| | || || |||||||| | ||||||||| |||||||||||| |||||| |||| ||| | || || |
|
|
| T |
12948527 |
caacattatcttctgaaacaatatttcctctgtatacggaaccaaaacttcctgatccgatcaagtttctatctgagaatccatgggttccaacatgtaa |
12948428 |
T |
|
| Q |
501 |
gtcttggtaagaaaccatagcaagttggtcaattattggtgaatc |
545 |
Q |
| |
|
|||||||| |||||| |||| ||||| |||||| | |||||||| |
|
|
| T |
12948427 |
ttcttggtatgaaaccttagctagttgatcaattgtaggtgaatc |
12948383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 1 - 471
Target Start/End: Complemental strand, 12907473 - 12907003
Alignment:
| Q |
1 |
agtcttgctatgccaaaatcactcacatgagcaacattgtcttcatcaataaggacattgcttggctttagatcacaatgaaggaccaattgctcacatt |
100 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||| |||| ||||||| ||||||||||||||| |||||||||||||| |||| || |||||||||| |
|
|
| T |
12907473 |
agtcttgctatgccaaaatcactcaaatgagcaaccatgtcatcatcaagaaggacattgcttggttttagatcacaatggaggattaactgctcacatt |
12907374 |
T |
|
| Q |
101 |
ctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacattcatcatccttga |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| || ||||| || | ||| || ||| | ||||| | |||| | | | |||||| | | |
|
|
| T |
12907373 |
ctcgatgaagataatgtaatgcagaagcaacatcgatgatgatgtttaatctaagaccaaggttcaatgttgttggaggatttgcattcaaagtttcagg |
12907274 |
T |
|
| Q |
201 |
atgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagttaaaatc |
300 |
Q |
| |
|
||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| | ||||||||||| ||||||| | |
|
|
| T |
12907273 |
atgtaaccactgttctaagcttccatttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaacaacatgttaaaacc |
12907174 |
T |
|
| Q |
301 |
ttaaccagatttcgatgtctaatatttttgagtgcattacattcggtaataaaactcttgggagctccattcttttcaaggtccaggaccttcacagcaa |
400 |
Q |
| |
|
||||||| ||||| |||||||||||||||||||| |||||||| ||| ||||| ||| |||| || || ||| |||| || |||||| || |||| |
|
|
| T |
12907173 |
ttaaccaaatttctgtgtctaatatttttgagtgcgttacattcaacaatgaaacttttgtgagcgccctttgtttggaggttcaagacctttactgcaa |
12907074 |
T |
|
| Q |
401 |
taactttatcttctgacataagatttcctttatacaccgaaccaaagcctcctgatccaatcaagtttcta |
471 |
Q |
| |
|
||| ||||||||||| | || ||||||||| || || |||||||| | ||||||||| |||| ||||||| |
|
|
| T |
12907073 |
caacattatcttctgaaacaatatttcctttgtatacggaaccaaaacttcctgatccgatcatgtttcta |
12907003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 1 - 545
Target Start/End: Complemental strand, 12958361 - 12957817
Alignment:
| Q |
1 |
agtcttgctatgccaaaatcactcacatgagcaacattgtcttcatcaataaggacattgcttggctttagatcacaatgaaggaccaattgctcacatt |
100 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||| ||||||| || |||||||||| |
|
|
| T |
12958361 |
agtcttgctattccaaaatcactcacatgagcaaccatgtcaccatcaagaaggacattgcttggctttagatcacagtgaaggattaactgctcacatt |
12958262 |
T |
|
| Q |
101 |
ctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttg-ctctacattcatcatccttg |
199 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| || ||||| || | ||| ||| ||| | ||||| | |||| | ||| |||||| || | |
|
|
| T |
12958261 |
ctcgatgaagataatgtaatgcagaagcaacatcgatgatgatgtttaatctatgaccaaggttcaatgttgttggaggactc-gcattcaaaatttgag |
12958163 |
T |
|
| Q |
200 |
aatgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagttaaaat |
299 |
Q |
| |
|
||| ||||| ||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||| | ||||||||||| ||||||| |
|
|
| T |
12958162 |
gatgtaaccactgttctaagcttccattttccatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaacaacatgttaaaac |
12958063 |
T |
|
| Q |
300 |
cttaaccagatttcgatgtctaatatttttgagtgcattacattcggtaataaaactcttgggagctccattcttttcaaggtccaggaccttcacagca |
399 |
Q |
| |
|
| |||||| |||||| |||||||||||||||||||| |||||||| ||| ||||||||| ||||||| || || | |||| || ||| || | ||| |
|
|
| T |
12958062 |
cctaaccaaatttcggtgtctaatatttttgagtgcgttacattcaacaatgaaactcttgtgagctccctttttctggaggttcaagacttttattgca |
12957963 |
T |
|
| Q |
400 |
ataactttatcttctgacataagatttcctttatacaccgaaccaaagcctcctgatccaatcaagtttctagatgagaagccatcagttgcctgataca |
499 |
Q |
| |
|
| ||| ||||||||||| | || ||||||| | || || |||||||| | ||||||||| |||||||||||| |||||| |||| ||| | || | |
|
|
| T |
12957962 |
acaacattatcttctgaaacaatatttcctctgtatacggaaccaaaacttcctgatccgatcaagtttctatctgagaatccattggttccaacatgta |
12957863 |
T |
|
| Q |
500 |
agtcttggtaagaaaccatagcaagttggtcaattattggtgaatc |
545 |
Q |
| |
|
| |||||||| |||||| |||| ||||| |||||| | |||||||| |
|
|
| T |
12957862 |
attcttggtatgaaaccttagctagttgatcaattgtaggtgaatc |
12957817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 165; Significance: 6e-88; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 1 - 545
Target Start/End: Original strand, 17923329 - 17923873
Alignment:
| Q |
1 |
agtcttgctatgccaaaatcactcacatgagcaacattgtcttcatcaataaggacattgcttggctttagatcacaatgaaggaccaattgctcacatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||| ||||||||||||||||||| || |||||||||| |
|
|
| T |
17923329 |
agtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggttttagatcacaatgaaggattaactgctcacatt |
17923428 |
T |
|
| Q |
101 |
ctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacattcatcatccttga |
200 |
Q |
| |
|
|||||||||| ||||| ||||||||||||||||| || ||||| || | ||| ||| ||| | ||||| | |||| | | | |||||| || | |
|
|
| T |
17923429 |
ctcgatgaaggtaatgcaatgcagaagcaacatcgatgatgatgtttaatctatgaccaaggttcaatgttgttggaggatttgcattcaaagtctcagg |
17923528 |
T |
|
| Q |
201 |
atgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagttaaaatc |
300 |
Q |
| |
|
||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| | ||||||||||| ||||||| | |
|
|
| T |
17923529 |
atgtaaccactgttctaagcttccatttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaacaacatgttaaaacc |
17923628 |
T |
|
| Q |
301 |
ttaaccagatttcgatgtctaatatttttgagtgcattacattcggtaataaaactcttgggagctccattcttttcaaggtccaggaccttcacagcaa |
400 |
Q |
| |
|
||||||| |||||| |||||||||||||||||||| |||||||| || ||||||||| ||||||| || || | |||| || ||| || || |||| |
|
|
| T |
17923629 |
ttaaccaaatttcggtgtctaatatttttgagtgcgttacattcaacaacgaaactcttgtgagctccctttttatggaggttcaagactttaactgcaa |
17923728 |
T |
|
| Q |
401 |
taactttatcttctgacataagatttcctttatacaccgaaccaaagcctcctgatccaatcaagtttctagatgagaagccatcagttgcctgatacaa |
500 |
Q |
| |
|
||| ||||||||||| | || ||||||| | || || |||||||| | ||||||||| |||| ||||||| |||||| ||||| ||| | | || |
|
|
| T |
17923729 |
caacattatcttctgaaacaatatttcctctgtatacggaaccaaaacttcctgatccgatcatgtttctatctgagaatccatcggttcctacgtgtaa |
17923828 |
T |
|
| Q |
501 |
gtcttggtaagaaaccatagcaagttggtcaattattggtgaatc |
545 |
Q |
| |
|
|||||||| |||||| |||| ||||| |||||| |||||||||| |
|
|
| T |
17923829 |
ttcttggtatgaaaccttagctagttgatcaattgttggtgaatc |
17923873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0692 (Bit Score: 129; Significance: 2e-66; HSPs: 1)
Name: scaffold0692
Description:
Target: scaffold0692; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 1 - 313
Target Start/End: Complemental strand, 7576 - 7264
Alignment:
| Q |
1 |
agtcttgctatgccaaaatcactcacatgagcaacattgtcttcatcaataaggacattgcttggctttagatcacaatgaaggaccaattgctcacatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||| |
|
|
| T |
7576 |
agtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggctttagatcacaatgaagtattaattgctcacatt |
7477 |
T |
|
| Q |
101 |
ctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacattcatcatccttga |
200 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| || ||||| || | ||| ||| ||| | ||||| | |||| | | | |||||| || | |
|
|
| T |
7476 |
ctcgatgaagttaatgtaatgcagaagcaacatcgatgatgatgtttaatctatgaccaaggttcaatgttattggaggatttgcattcaaagtctcagg |
7377 |
T |
|
| Q |
201 |
atgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagttaaaatc |
300 |
Q |
| |
|
||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| | ||||||||||| ||||||| | |
|
|
| T |
7376 |
atgtaaccactgttctaagcttccatttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaacaacatgttaaaacc |
7277 |
T |
|
| Q |
301 |
ttaaccagatttc |
313 |
Q |
| |
|
|||||| ||||| |
|
|
| T |
7276 |
ctaaccaaatttc |
7264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 5 - 374
Target Start/End: Original strand, 31467092 - 31467461
Alignment:
| Q |
5 |
ttgctatgccaaaatcactcacatgagcaacattgtcttcatcaataaggacattgcttggctttagatcacaatgaaggaccaattgctcacattctcg |
104 |
Q |
| |
|
|||||||||||||||||||||||||||| || | ||||||| ||| || ||||| ||||||| ||||||||||| ||| ||||| |||||| | |
|
|
| T |
31467092 |
ttgctatgccaaaatcactcacatgagctaccatagaatcatcaagaagaacgttgctaggctttaaatcacaatgaatgacaggttgctgacattcatg |
31467191 |
T |
|
| Q |
105 |
atgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctaca-ttcatcatccttgaatg |
203 |
Q |
| |
|
|||||||||||| ||||| |||||||| |||||||| ||||| | ||||| |||| ||||| | || | | || || || | | || || || |
|
|
| T |
31467192 |
atgaagataatgaaatgccgaagcaacgtcaataataatatttaacctttgtgctagattcaatgttttttctggacctgcaatttcttttgctgga-tg |
31467290 |
T |
|
| Q |
204 |
caaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagttaaaatctta |
303 |
Q |
| |
|
|||||| |||||||||||||| ||||||||||| || ||||| |||||||| ||||| ||| ||||| |||| |||| ||||| | |||||||||||| |
|
|
| T |
31467291 |
caaccaactttctaagcttccgtttttcatgtactcgaaaacaagagctttaaattcttgatctttgaaatctgtactggaacagcttgttaaaatctta |
31467390 |
T |
|
| Q |
304 |
accagatttcgatgtctaatatttttgagtgcattacattcggtaataaaactcttgggagctccattctt |
374 |
Q |
| |
|
|||| |||||| ||||||||||||||||||||||| ||||| | || ||||||||| ||||||| ||||| |
|
|
| T |
31467391 |
accaaatttcggtgtctaatatttttgagtgcattgcattcagcaaggaaactcttgtgagctcctttctt |
31467461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 60; Significance: 3e-25; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 214 - 497
Target Start/End: Complemental strand, 28605696 - 28605413
Alignment:
| Q |
214 |
tctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagttaaaatcttaaccagatttc |
313 |
Q |
| |
|
||||| |||||||||| |||||| |||||||||| |||||||||||| | ||| |||||||| ||||| |||||||| ||||||||||| || ||||| | |
|
|
| T |
28605696 |
tctaaacttccattttccatgtactcaaaaactaaagctttgaattcattaccattgtaatccatacttgaacaacatgttaaaatcttgacaagattcc |
28605597 |
T |
|
| Q |
314 |
gatgtctaatatttttgagtgcattacattcggtaataaaactcttgggagctccattcttttcaaggtccaggaccttcacagcaataactttatcttc |
413 |
Q |
| |
|
||| | ||| ||||||||||||| ||||| | || ||||||||| | ||||| | || ||||| || |||||| | ||||| |||| | ||||| |
|
|
| T |
28605596 |
tatgacggatacttttgagtgcattgcattcagcgatgaaactcttgtgcgctcccctgacttgaaggttcaagacctttatagcaacaactctttcttc |
28605497 |
T |
|
| Q |
414 |
tgacataagatttcctttatacaccgaaccaaagcctcctgatccaatcaagtttctagatgagaagccatcagttgcctgata |
497 |
Q |
| |
|
|||| |||| |||||||||| || | ||||| || || ||||| |||||||| || || ||||| |||| ||||| ||||| |
|
|
| T |
28605496 |
tgactcaagaattcctttatatacaaatccaaaaccaccagatcctatcaagttgctggaagagaatccatttgttgcttgata |
28605413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 28605894 - 28605825
Alignment:
| Q |
13 |
ccaaaatcactcacatgagcaacattgtcttcatcaataaggacattgcttggctttagatcacaatgaa |
82 |
Q |
| |
|
||||||||||||||||||||||| |||| | || || ||| | |||||||||||||| ||||||||||| |
|
|
| T |
28605894 |
ccaaaatcactcacatgagcaaccatgtcattatgaagaagaatattgcttggctttaaatcacaatgaa |
28605825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 46; Significance: 6e-17; HSPs: 7)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 39875818 - 39875899
Alignment:
| Q |
1 |
agtcttgctatgccaaaatcactcacatgagcaacattgtcttcatcaataaggacattgcttggctttagatcacaatgaa |
82 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||| |||| || |||| ||||||||||||||| |||| ||||||||||| |
|
|
| T |
39875818 |
agtctggctaagccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggttttaaatcacaatgaa |
39875899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 39883941 - 39884022
Alignment:
| Q |
1 |
agtcttgctatgccaaaatcactcacatgagcaacattgtcttcatcaataaggacattgcttggctttagatcacaatgaa |
82 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||| |||| || |||| ||||||||||||||| |||| ||||||||||| |
|
|
| T |
39883941 |
agtctggctaagccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggttttaaatcacaatgaa |
39884022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 39890895 - 39890976
Alignment:
| Q |
1 |
agtcttgctatgccaaaatcactcacatgagcaacattgtcttcatcaataaggacattgcttggctttagatcacaatgaa |
82 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||| |||| || |||| ||||||||||||||| |||| ||||||||||| |
|
|
| T |
39890895 |
agtctggctaagccaaaatcactcacatgagcaaccatgtcatcttcaagaaggacattgcttggttttaaatcacaatgaa |
39890976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 214 - 437
Target Start/End: Original strand, 39898834 - 39899057
Alignment:
| Q |
214 |
tctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagttaaaatcttaaccagatttc |
313 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| ||||| || || | |||| | | ||| | |||||| ||||| || | || ||| || ||||||| |
|
|
| T |
39898834 |
tctaagcttccatttgtcatgtattcaaaaactattgctttaaagtcattacctctatgatccacactagagcaacatgtgataaccttgactagatttc |
39898933 |
T |
|
| Q |
314 |
gatgtctaatatttttgagtgcattacattcggtaataaaactcttgggagctccattcttttcaaggtccaggaccttcacagcaataactttatcttc |
413 |
Q |
| |
|
||| || |||||| ||| ||||||||||||| ||| ||||| || ||||||| ||||| | ||||| || ||||| ||||||| |||| | ||||| |
|
|
| T |
39898934 |
tatgcctgatatttctgaaagcattacattcggcaatgaaacttttatgagctcctttcttctgaaggtttagaacctttacagcaacaactctttcttc |
39899033 |
T |
|
| Q |
414 |
tgacataagatttcctttatacac |
437 |
Q |
| |
|
||| |||| ||||||| ||||| |
|
|
| T |
39899034 |
tgaattaagtattcctttgtacac |
39899057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 214 - 437
Target Start/End: Original strand, 39876022 - 39876245
Alignment:
| Q |
214 |
tctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagttaaaatcttaaccagatttc |
313 |
Q |
| |
|
|||||||| |||||||||||||||||| |||||| || || || || | |||||||| ||| | |||||| ||||| || | |||||| || ||||||| |
|
|
| T |
39876022 |
tctaagctcccatttttcatgtattcataaactattgccttaaagtcgtcacctttgtgatccacactagagcaacatgtgataatcttgactagatttc |
39876121 |
T |
|
| Q |
314 |
gatgtctaatatttttgagtgcattacattcggtaataaaactcttgggagctccattcttttcaaggtccaggaccttcacagcaataactttatcttc |
413 |
Q |
| |
|
||| || |||||| | | ||||||||||||| || ||||| || ||||||| ||||| | ||||| || ||||| ||||||| |||| | ||||| |
|
|
| T |
39876122 |
tatgcctgatatttctaaaagcattacattcggcaaggaaacttttatgagctcctttcttctgaaggtttagaacctttacagcaacaactctttcttc |
39876221 |
T |
|
| Q |
414 |
tgacataagatttcctttatacac |
437 |
Q |
| |
|
||| |||| ||||||| ||||| |
|
|
| T |
39876222 |
tgaattaagtcttcctttgtacac |
39876245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 214 - 437
Target Start/End: Original strand, 39884145 - 39884368
Alignment:
| Q |
214 |
tctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagttaaaatcttaaccagatttc |
313 |
Q |
| |
|
|||||||| |||||| ||||||||||| |||||| || || || || | |||||||| ||| | |||||| ||||| || | |||||| || ||||||| |
|
|
| T |
39884145 |
tctaagctcccatttgtcatgtattcataaactattgccttaaagtcgtcacctttgtgatccacactagagcaacatgtgataatcttgactagatttc |
39884244 |
T |
|
| Q |
314 |
gatgtctaatatttttgagtgcattacattcggtaataaaactcttgggagctccattcttttcaaggtccaggaccttcacagcaataactttatcttc |
413 |
Q |
| |
|
||| || |||||| | | ||||||||||||| || ||||| || ||||||| ||||| | ||||| || ||||| ||||||| |||| | ||||| |
|
|
| T |
39884245 |
tatgcctgatatttctaaaagcattacattcggcaaggaaacttttatgagctcctttcttctgaaggtttagaacctttacagcaacaactctttcttc |
39884344 |
T |
|
| Q |
414 |
tgacataagatttcctttatacac |
437 |
Q |
| |
|
||| |||| ||||||| ||||| |
|
|
| T |
39884345 |
tgaattaagtcttcctttgtacac |
39884368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 214 - 437
Target Start/End: Original strand, 39891099 - 39891322
Alignment:
| Q |
214 |
tctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagttaaaatcttaaccagatttc |
313 |
Q |
| |
|
|||||||| |||||| ||||||||||| |||||| || || || || | |||||||| ||| | |||||| ||||| || | |||||| || ||||||| |
|
|
| T |
39891099 |
tctaagctcccatttgtcatgtattcataaactattgccttaaagtcgtcacctttgtgatccacactagagcaacatgtgataatcttgactagatttc |
39891198 |
T |
|
| Q |
314 |
gatgtctaatatttttgagtgcattacattcggtaataaaactcttgggagctccattcttttcaaggtccaggaccttcacagcaataactttatcttc |
413 |
Q |
| |
|
||| || |||||| | | ||||||||||||| || ||||| || ||||||| ||||| | ||||| || ||||| ||||||| |||| | ||||| |
|
|
| T |
39891199 |
tatgcctgatatttctaaaagcattacattcggcaaggaaacttttatgagctcctttcttctgaaggtttagaacctttacagcaacaactctttcttc |
39891298 |
T |
|
| Q |
414 |
tgacataagatttcctttatacac |
437 |
Q |
| |
|
||| |||| ||||||| ||||| |
|
|
| T |
39891299 |
tgaattaagtcttcctttgtacac |
39891322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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