View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1952_low_2 (Length: 714)
Name: NF1952_low_2
Description: NF1952
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1952_low_2 |
 | |
|
Alignment Details
Target: chr3 (Bit Score: 605; Significance: 0; HSPs: 36)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 605; E-Value: 0
Query Start/End: Original strand, 17 - 709
Target Start/End: Complemental strand, 22458521 - 22457829
Alignment:
| Q |
17 |
aatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttg |
116 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22458521 |
aatcttcttttgttgaagtgtatgaaatgaaaggtttggctgaacaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttg |
22458422 |
T |
|
| Q |
117 |
tccagaaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatcttgcaaagat |
216 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22458421 |
tccagaaaatcttattgatatatcttttaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatcttgcaaagat |
22458322 |
T |
|
| Q |
217 |
agaaatacatcagaatggtataagtttagtgaaattctaaatatagagttaaaagaagatttgaagatnnnnnnnnttgtaggtctcggttaccatgatt |
316 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
22458321 |
agaaatacatcagaatggtataagtttagtgaaaatctaaatatagagttaaaagaagatttgaagataaaaaaaattgtaggtctcggttaccatgatc |
22458222 |
T |
|
| Q |
317 |
tgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgaagg |
416 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
22458221 |
tgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatactgattcggcaatggatggctgaagg |
22458122 |
T |
|
| Q |
417 |
attcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagt |
516 |
Q |
| |
|
||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22458121 |
atttgtgaaagatgatatggtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagt |
22458022 |
T |
|
| Q |
517 |
attgatggaagagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattagcgagg |
616 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22458021 |
attgatggaagagcaaaaagttgttgtgttcatgatctggtgcatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattagcgagg |
22457922 |
T |
|
| Q |
617 |
atgaccaatcatctttaggtgggatggttcgacgcctatcaatagcaatcagatctgataatttcatggaaaatattgaaaactcacaggttc |
709 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||| |
|
|
| T |
22457921 |
atgaccaatcatctttaagtgggatggttcgacgcctatcaatagcaatcagatttgacaatttgatggaaaatattgaaaactcacaggttc |
22457829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 605; E-Value: 0
Query Start/End: Original strand, 17 - 709
Target Start/End: Complemental strand, 22481502 - 22480810
Alignment:
| Q |
17 |
aatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttg |
116 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22481502 |
aatcttcttttgttgaagtgtatgaaatgaaaggtttggctgaacaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttg |
22481403 |
T |
|
| Q |
117 |
tccagaaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatcttgcaaagat |
216 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22481402 |
tccagaaaatcttattgatatatcttttaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatcttgcaaagat |
22481303 |
T |
|
| Q |
217 |
agaaatacatcagaatggtataagtttagtgaaattctaaatatagagttaaaagaagatttgaagatnnnnnnnnttgtaggtctcggttaccatgatt |
316 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
22481302 |
agaaatacatcagaatggtataagtttagtgaaaatctaaatatagagttaaaagaagatttgaagataaaaaaaattgtaggtctcggttaccatgatc |
22481203 |
T |
|
| Q |
317 |
tgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgaagg |
416 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
22481202 |
tgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatactgattcggcaatggatggctgaagg |
22481103 |
T |
|
| Q |
417 |
attcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagt |
516 |
Q |
| |
|
||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22481102 |
atttgtgaaagatgatatggtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagt |
22481003 |
T |
|
| Q |
517 |
attgatggaagagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattagcgagg |
616 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22481002 |
attgatggaagagcaaaaagttgttgtgttcatgatctggtgcatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattagcgagg |
22480903 |
T |
|
| Q |
617 |
atgaccaatcatctttaggtgggatggttcgacgcctatcaatagcaatcagatctgataatttcatggaaaatattgaaaactcacaggttc |
709 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||| |
|
|
| T |
22480902 |
atgaccaatcatctttaagtgggatggttcgacgcctatcaatagcaatcagatttgacaatttgatggaaaatattgaaaactcacaggttc |
22480810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 17 - 663
Target Start/End: Complemental strand, 22358034 - 22357388
Alignment:
| Q |
17 |
aatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttg |
116 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||| ||| |||||||||||| |||||||||||||||||| ||||||| |||||||| |||||||| |
|
|
| T |
22358034 |
aatcttcttttgttgaagtgtatgaactaaaaggtttgactgtagaacaatcttttgagttgttcaataagaaggcattccatgacttaaatggacgttg |
22357935 |
T |
|
| Q |
117 |
tccagaaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatcttgcaaagat |
216 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||| |||||||||| ||||| ||||||||||||||| ||||||||||||||||| || ||||||| |
|
|
| T |
22357934 |
tccagaaaatcttattgatatatcttccaaaattgttaaaaaatgcaaaggattaccactagcaattgtagtcattggtggtattttagctcccaaagat |
22357835 |
T |
|
| Q |
217 |
agaaatacatcagaatggtataagtttagtgaaattctaaatatagagttaaaagaagatttgaagatnnnnnnnnttgtaggtctcggttaccatgatt |
316 |
Q |
| |
|
| || | || |||||||||||||||||||||| | ||||| ||||||| | ||| ||| | || || |||| | |||||||||||| |
|
|
| T |
22357834 |
aaaattccaatggaatggtataagtttagtgaaaatataaatgcagagttagaggaatattccataataagaaaaattttaggatttagttaccatgatt |
22357735 |
T |
|
| Q |
317 |
tgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgaagg |
416 |
Q |
| |
|
|| ||||| | |||||||||||||| ||||||||||||||||||||||||| | || ||||| | |||| | ||||| ||| |||||||| |||||||| |
|
|
| T |
22357734 |
tgccttactacctcaagtcatgtttcttgtattttggattatatcctgaagactataaagttcattcaaagacattgactcgacaatggattgctgaagg |
22357635 |
T |
|
| Q |
417 |
attcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagt |
516 |
Q |
| |
|
|| |||||| | || | | || ||| ||||||| |||||||| |||||||||| ||| || || |||| ||||||||||||||| |||||| ||| |
|
|
| T |
22357634 |
gtttgtgaaacaatatggggaaagaacgatggaagaggttgcagaaggatatttaaaagagttaatacatagaagtttggtgcaagtagattcaatcagt |
22357535 |
T |
|
| Q |
517 |
attgatggaagagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattagcgagg |
616 |
Q |
| |
|
||||||||||||| |||| ||||| |||||||||||||||| |||| | |||||||||||||| | | | ||||| |||||| ||||||||| |||| |
|
|
| T |
22357534 |
attgatggaagagtaaaacgttgtcgtgttcatgatctagtgcatgaaatgatccttgaaaaacataagcatttaagcttttgcgagaatattactgagg |
22357435 |
T |
|
| Q |
617 |
atgaccaatcatctttaggtgggatggttcgacgcctatcaatagca |
663 |
Q |
| |
|
| |||| |||||| ||| ||| |||||||||||||||||||| |
|
|
| T |
22357434 |
gcaaacaattgtctttaactggaatgattcgacgcctatcaatagca |
22357388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 18 - 709
Target Start/End: Complemental strand, 22436665 - 22435971
Alignment:
| Q |
18 |
atcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttgt |
117 |
Q |
| |
|
|||||||||||||||||| ||||||| ||||||| |||||||| ||||||| || ||||||||||||||| ||||||| |||| | ||| ||||| |
|
|
| T |
22436665 |
atcttcttttgttgaagtacatgaacttcaaggtttaactgaagaaaaatctttagaattgttcaataagaaggcattccataacttgagtggatgttgt |
22436566 |
T |
|
| Q |
118 |
ccagaaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatcttgcaaagata |
217 |
Q |
| |
|
||| |||||||||||||||||||||| ||||||||| |||||||||| ||||| || |||||||||||| ||| ||||||| |||||||||||||||||| |
|
|
| T |
22436565 |
ccacaaaatcttattgatatatcttccaaaattgttaaaaaatgcaaaggattacctctagcaattgtagtcactggtggtcttttatcttgcaaagata |
22436466 |
T |
|
| Q |
218 |
gaaatacatcagaatggtataagtttagtgaaattctaaatataga---gttaaaagaagatttgaagatnnnnnnnnttgtaggtctcggttaccatga |
314 |
Q |
| |
|
||||| | | |||||||| ||||||||||||| | ||||| ||| || ||| ||| ||| | || || |||| | |||||||||| |
|
|
| T |
22436465 |
gaaatcctactgaatggtacaagtttagtgaaaatataaatgcagatcagtcaaatgaatattccataataagaaaaattctaggatttagttaccatga |
22436366 |
T |
|
| Q |
315 |
tttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgaa |
414 |
Q |
| |
|
|||| ||||| | |||||||| ||||| ||||||||||||||||||||||||| | |||||||| | |||| | ||||| ||| |||||||| |||||| |
|
|
| T |
22436365 |
tttgccttactacctcaagtcgtgtttcttgtattttggattatatcctgaagactatatagttcgttcaaaaacattgactcgccaatggattgctgaa |
22436266 |
T |
|
| Q |
415 |
ggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaatta |
514 |
Q |
| |
|
|| ||||||||||| || || | || |||||||||||| ||||| | |||||||||| ||| ||| ||| |||| |||||||||| ||||||||||| | |
|
|
| T |
22436265 |
gggttcgtgaaagaagagaggggaaggacattggaagatattgcaaaaggatatttaatagagttggtcaatagaagtttggtgcatgtagtttcaataa |
22436166 |
T |
|
| Q |
515 |
gtattgatggaagagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattagcga |
614 |
Q |
| |
|
||||||||||||||| |||||||||| ||||||||||| |||| |||||| |||||||||| |||| ||| || |||||||||||||||||||||| || |
|
|
| T |
22436165 |
gtattgatggaagagtaaaaagttgtcgtgttcatgatttagtgcatgcaatgatccttgagaaatatgaggatttaagtttttgcaagaatattactga |
22436066 |
T |
|
| Q |
615 |
ggatgaccaatcatctttaggtgggatggttcgacgcctatcaatagcaatcagatctgataatttcatggaaaatattgaaaactcacaggttc |
709 |
Q |
| |
|
||| | |||| |||||| | | || ||||||||||||||| |||| ||| ||| ||||| | |||||| |||||||| |||||| |||| |
|
|
| T |
22436065 |
ggacaatcaattttctttaactagagtgactcgacgcctatcaatggcaaccagttcttataatctaatggaaggtattgaaagctcacatgttc |
22435971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 40 - 663
Target Start/End: Complemental strand, 22442754 - 22442128
Alignment:
| Q |
40 |
gaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttgtccagaaaatcttattgatatat |
139 |
Q |
| |
|
||||| ||||||||| ||| ||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||| |||||||||||| ||||| |
|
|
| T |
22442754 |
gaactaaaaggtttgactgtagaacaatctttggagttgttcaataagaaggcatttcatgacttaaacggacgttgtccaaaaaatcttattggtatat |
22442655 |
T |
|
| Q |
140 |
cttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatcttgcaaagatagaaatacatcagaatggtataa |
239 |
Q |
| |
|
|||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| || |||||||||||||||| ||||||||| | |
|
|
| T |
22442654 |
cttccaaaattgttgaaaaatgcaatggattaccactagcaattgtagtcattggtggtattttagctcccaaagatagaaatacaattgaatggtatga |
22442555 |
T |
|
| Q |
240 |
gtttagtgaaattctaaatatag---agttaaaagaagatttgaagatnnnnnnnnttgtaggtctcggttaccatgatttgtcttacaatctcaagtca |
336 |
Q |
| |
|
||||| ||||| | ||||| || |||| || ||| ||| | | || |||| ||| |||||||||||||| ||| ||| ||||||||| |
|
|
| T |
22442554 |
gtttaatgaaaatataaatgcagatcagtttaaggaatattccatagtaagaaaaattttaggactcagttaccatgatttgccttgcaacctcaagtca |
22442455 |
T |
|
| Q |
337 |
tgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgaaggattcgtgaaagatgatagcg |
436 |
Q |
| |
|
||||| |||||||||||||||||||| |||| | | || | | |||| | ||||| ||| |||||||| |||||||| || |||||||| || | | |
|
|
| T |
22442454 |
tgtttcttgtattttggattatatcccgaagactatgaagcttgttcaaagacattgactcgtcaatggatagctgaagggtttgtgaaagaatatgggg |
22442355 |
T |
|
| Q |
437 |
taaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaaaag |
536 |
Q |
| |
|
|| ||||||||| | |||||||| |||||||||| || || ||| ||||| ||||||||||||||||||||| |||||||||||||||| |||||| |
|
|
| T |
22442354 |
aaaggacattggaaaaggttgcagaaggatatttaaaagtgttaatctgtagaagtttggtgcaagtagtttcaaccagtattgatggaagagtaaaaag |
22442255 |
T |
|
| Q |
537 |
ttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattagcgaggatgaccaatcatctttaggt |
636 |
Q |
| |
|
||| |||||||||||||||| |||| | |||||||||||||| | | | ||||| |||||| ||||||||| |||| | |||| |||||| | |
|
|
| T |
22442254 |
ttgccgtgttcatgatctagtgcatgaaatgatccttgaaaaacataagcatttaagcttttgcgagaatattactgagggaaaacaattgtctttaact |
22442155 |
T |
|
| Q |
637 |
gggatggttcgacgcctatcaatagca |
663 |
Q |
| |
|
|| ||| |||||||||||||||||||| |
|
|
| T |
22442154 |
ggaatgattcgacgcctatcaatagca |
22442128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 17 - 709
Target Start/End: Complemental strand, 22367959 - 22367264
Alignment:
| Q |
17 |
aatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttg |
116 |
Q |
| |
|
|||||||||||||||||||| || |||| ||||||| ||||||| ||||||| || ||||||||||||||| | ||||| ||||| | |||| ||| |
|
|
| T |
22367959 |
aatcttcttttgttgaagtgcataaacttgaaggtttaagtgaagaaaaatctttagaattgttcaataagaaggcgttccatgacttgagcggatattg |
22367860 |
T |
|
| Q |
117 |
tccagaaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatcttgcaaagat |
216 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
22367859 |
tccagaaaatcttattgatatatcttccaaaattgttgaaaaatgcaatggattaccactcgcaattgtagtcattggtggtattttagcttgcaaagat |
22367760 |
T |
|
| Q |
217 |
agaaatacatcagaatggtataagtttagtgaaattctaaatatag---agttaaaagaagatttgaagatnnnnnnnnttgtaggtctcggttaccatg |
313 |
Q |
| |
|
|| ||| || ||||||| |||||||||||||| | ||||| || ||| ||| ||| ||| | ||| || |||| || ||||||||| |
|
|
| T |
22367759 |
aggaatccaattgaatggtctaagtttagtgaaaatataaatgcagatcagtcaaaggaatattccatgataaaaaaaattctaggacttagttaccatg |
22367660 |
T |
|
| Q |
314 |
atttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctga |
413 |
Q |
| |
|
||||| ||| ||| |||||||||||||| ||||| ||||||||||||||||||| | | |||| | |||||||||||| ||| |||||||| ||||| |
|
|
| T |
22367659 |
atttgccttgcaacctcaagtcatgtttcttgtactttggattatatcctgaagactcaaatgttcgttcaaatatattgactcgtcaatggattgctga |
22367560 |
T |
|
| Q |
414 |
aggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaatt |
513 |
Q |
| |
|
||| || |||||||| || || | || ||||||||||| |||||||| ||| |||||| ||| |||||| ||||| ||||||||| ||||| | || |
|
|
| T |
22367559 |
agggtttgtgaaagaagaaaggggaatgacattggaagaggttgcagaaggacatttaatagagttgatccgtagaagtttggtgcgagtagatgggatc |
22367460 |
T |
|
| Q |
514 |
agtattgatggaagagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattagcg |
613 |
Q |
| |
|
| |||||||||||||| | | ||||| |||||||||||||||| |||||| |||||||| | ||| ||| || ||||| |||||||||| ||||| || |
|
|
| T |
22367459 |
actattgatggaagagtagacagttgccgtgttcatgatctagtgcatgcaatgatccttaataaacatgaggatttaagcttttgcaagagtattaccg |
22367360 |
T |
|
| Q |
614 |
aggatgaccaatcatctttaggtgggatggttcgacgcctatcaatagcaatcagatctgataatttcatggaaaatattgaaaactcacaggttc |
709 |
Q |
| |
|
|||| |||| ||| | ||| ||| |||||||||||||||||||| || ||||||||| | |||||| |||||||| |||||| |||| |
|
|
| T |
22367359 |
aggacagacaattgccttcaactggaatgattcgacgcctatcaatagcatcaagttctgataatctaatggaaggtattgaaagctcacatgttc |
22367264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 22 - 709
Target Start/End: Complemental strand, 22467978 - 22467291
Alignment:
| Q |
22 |
tcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttgtccag |
121 |
Q |
| |
|
||||||| | ||||| |||| ||| || |||| |||||||||| || ||||| ||||| || |||||| | ||||| ||||| ||||| |||||||| |
|
|
| T |
22467978 |
tcttttggtaaagtgcatgagctggaacgtttatctgaagaacagtccttggaattgtttaaaaagaaggcgttccatgacttggacggagtttgtccag |
22467879 |
T |
|
| Q |
122 |
aaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatcttgcaaagatagaaa |
221 |
Q |
| |
|
|||||||| |||| |||||||| |||||||||||||| ||||| ||||| || ||||||||||| ||| |||| |||||||||| ||||| ||||||| |
|
|
| T |
22467878 |
aaaatctttttgacatatcttccaaaattgttgaaaactgcaaaggattacctctagcaattgttgtcaccggtgatattttatctcgcaaaaatagaaa |
22467779 |
T |
|
| Q |
222 |
tacatcagaatggtataagtttagtgaaattctaaatatagagttaaaagaagatttgaagatnnnnnnnnttgtaggtctcggttaccatgatttgtct |
321 |
Q |
| |
|
| || ||||||| ||| |||||||||| | ||||| |||||||| | | | ||| | || || |||| | |||||||| |||| || |
|
|
| T |
22467778 |
tccaattgaatggtctaaatttagtgaaaatataaatgtagagttagagggatattccacaataagaaaaattttaggatttagttaccataatttacct |
22467679 |
T |
|
| Q |
322 |
tacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgaaggattcg |
421 |
Q |
| |
|
||||| |||||||||||||| ||||||||||||||||||||||||| | |||||||| | |||| | |||| ||| |||||||| |||||||| || | |
|
|
| T |
22467678 |
tacaacctcaagtcatgtttcttgtattttggattatatcctgaagactatatagttcattcaaagacgttgactcgccaatggattgctgaagggtttg |
22467579 |
T |
|
| Q |
422 |
tgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattga |
521 |
Q |
| |
|
|||| || || || | | ||||||||||| ||||| || |||||||||| ||| |||||| |||| |||||||||||||||||||||| |||||||| |
|
|
| T |
22467578 |
tgaaggaagacagggggaggacattggaagaggttgctgaaggatatttaatagagttgatccatagaagtttggtgcaagtagtttcaataagtattga |
22467479 |
T |
|
| Q |
522 |
tggaagagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattagcgaggatgac |
621 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||| |||||| |||||||||| |||| ||| || |||||||||||||||||||||| ||||| | |
|
|
| T |
22467478 |
tggaagagtaaaaagttgtcgtgttcatgatctagtgcatgcaatgatccttgataaatatgaggatttaagtttttgcaagaatattactgaggacaaa |
22467379 |
T |
|
| Q |
622 |
caatcatctttaggtgggatggttcgacgcctatcaatagcaatcagatctgataatttcatggaaaatattgaaaactcacaggttc |
709 |
Q |
| |
|
|||| |||||| ||| ||| |||||||||||||||||| || | ||||||||||| ||| || ||||||||||||||| |||| |
|
|
| T |
22467378 |
caattgtctttaactggaatgattcgacgcctatcaatagaaactacctctgataatttaatgaaagttattgaaaactcacatgttc |
22467291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 56 - 709
Target Start/End: Complemental strand, 22630434 - 22629786
Alignment:
| Q |
56 |
ctgaagaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttgtccagaaaatcttattgatatatcttcaaaaattgttga |
155 |
Q |
| |
|
|||||||||| |||||||| ||||| || ||||| | ||||| ||||| | ||| |||||||||||||||| |||| |||||||| ||||||||||| |
|
|
| T |
22630434 |
ctgaagaacagtctttggaattgtttaaaaagaaagcgttccatgacttggatggattttgtccagaaaatctttttgacatatcttccaaaattgttga |
22630335 |
T |
|
| Q |
156 |
aaaatgcaatggattgccactagcaattgtactcattggtggtattttatcttgcaaagatagaaatacatcagaatggtataagtttagtgaaattcta |
255 |
Q |
| |
|
||||||||| ||||| || |||||||||||| ||| |||| |||||||||| |||||| ||||||| || ||||||| |||||||||||||| | || |
|
|
| T |
22630334 |
aaaatgcaaaggattacctctagcaattgtagtcaccggtgatattttatctcgcaaagttagaaatccaattgaatggtctaagtttagtgaaaatata |
22630235 |
T |
|
| Q |
256 |
aatatagagttaaaagaagatttgaagatnnnnnnnnttgtaggtctcggttaccatgatttgtcttacaatctcaagtcatgtttgttgtattttggat |
355 |
Q |
| |
|
||| |||||||| | ||| ||| | || | |||| | ||||||||||||| ||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
22630234 |
aatgtagagttagaggaatattccacaataagaaaaaatttaggatttagttaccatgatttaccttacaacctcaagtcatgtttcttgtattttggat |
22630135 |
T |
|
| Q |
356 |
tatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgt |
455 |
Q |
| |
|
| |||||||||| | |||||||| | |||| | |||| ||| |||||||| |||||||| || |||||||| | | | || |||||||||||| || |
|
|
| T |
22630134 |
tctatcctgaagactatatagttcgttcaaaggtgttgactcgccaatggatcgctgaagggtttgtgaaagaagtcaagggaagaacattggaagaggt |
22630035 |
T |
|
| Q |
456 |
tgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgttgtgttcatgatcta |
555 |
Q |
| |
|
|| ||| |||||||||| ||| ||| || ||||| ||||||||||||||||||||| ||||| ||||||||| |||||||||| |||| ||||||||| |
|
|
| T |
22630034 |
tggagaaggatatttaatagagttggtccgtagaagtttggtgcaagtagtttcaacaagtat--atggaagagtaaaaagttgtcgtgtacatgatcta |
22629937 |
T |
|
| Q |
556 |
gtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattagcgaggatgaccaatcatctttaggtgggatggttcgacgcctat |
655 |
Q |
| |
|
|| |||||| |||||||||| |||| ||| || |||||||||||||||||||||| ||||| | |||| |||||| ||| ||| || ||||||||| |
|
|
| T |
22629936 |
gtgcatgcaatgatccttgagaaatatgaggatttaagtttttgcaagaatattattgaggacaagcaattgtctttaactggaatgatttgacgcctat |
22629837 |
T |
|
| Q |
656 |
caatagcaatcagatctgataatttcatggaaaatattgaaaactcacaggttc |
709 |
Q |
| |
|
||||||||| | |||||||||| ||| ||| ||||||||||||||| |||| |
|
|
| T |
22629836 |
caatagcaacta---ctgataatttaatgaaaagtattgaaaactcacatgttc |
22629786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 125 - 609
Target Start/End: Complemental strand, 22635430 - 22634946
Alignment:
| Q |
125 |
atcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatcttgcaaagatagaaatac |
224 |
Q |
| |
|
||||||||||||||||||| |||||||| ||||||||||| ||||| || |||||||||||| ||||||||| |||| ||||| ||| ||||||||| | |
|
|
| T |
22635430 |
atcttattgatatatcttccaaaattgtcgaaaaatgcaaaggattacctctagcaattgtagtcattggtgatattctatctcgcacggatagaaattc |
22635331 |
T |
|
| Q |
225 |
atcagaatggtataagtttagtgaaattctaaatatagagttaaaagaagatttgaagatnnnnnnnnttgtaggtctcggttaccatgatttgtcttac |
324 |
Q |
| |
|
| |||||||| ||||||||||||| | ||||| ||||||| | ||| ||| | ||| || |||| || |||||||||||||| | | | |
|
|
| T |
22635330 |
aatagaatggtcgaagtttagtgaaaatataaatgcagagttagaggaatattccatgataagaaaaattttaggacttagttaccatgatttgccatgc |
22635231 |
T |
|
| Q |
325 |
aatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgaaggattcgtga |
424 |
Q |
| |
|
| |||||||||||||| ||||||||||||||||||||||||| | |||||||| | |||| | ||||| ||| |||||||| |||||||| ||||||| |
|
|
| T |
22635230 |
tacctcaagtcatgtttcttgtattttggattatatcctgaagactatatagttcgttcaaaaacattgactcgccaatggattgctgaagggttcgtga |
22635131 |
T |
|
| Q |
425 |
aagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatgg |
524 |
Q |
| |
|
|||| || || | || ||||| ||||| |||||||| ||||||||| ||| |||||| |||| ||||||||||||||||||||| |||||||||||| |
|
|
| T |
22635130 |
aagaagacaggggaaggacatttgaagaggttgcagaaggatatttagtagagttgatccatagaagtttggtgcaagtagtttcaactagtattgatgg |
22635031 |
T |
|
| Q |
525 |
aagagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatatt |
609 |
Q |
| |
|
||||| ||||||||| | |||||||||||||| |||| | |||||||||| |||| | | || ||||||||||||||||||||| |
|
|
| T |
22635030 |
aagagtaaaaagttgccgcgttcatgatctagtgcatgaaatgatccttgacaaatttaaggatttaagtttttgcaagaatatt |
22634946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 56 - 709
Target Start/End: Complemental strand, 22353806 - 22353155
Alignment:
| Q |
56 |
ctgaagaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttgtccagaaaatcttattgatatatcttcaaaaattgttga |
155 |
Q |
| |
|
||||| ||||||||||||| ||||| || |||||| | |||| ||||| ||||| ||||||| |||||||| || |||||||||| ||||| |||| |
|
|
| T |
22353806 |
ctgaaaaacaatctttggatttgtttaaaaagaaggcgttccgtgacttggacggattttgtccaaaaaatcttttttatatatcttccgaaattattga |
22353707 |
T |
|
| Q |
156 |
aaaatgcaatggattgccactagcaattgtactcattggtggtattttatcttgcaaagatagaaatacatcagaatggtataagtttagtgaaattcta |
255 |
Q |
| |
|
||||||||| ||||| || || ||||||||| |||| ||| |||||||||| |||||||||||||| || ||||||| |||||||||||||| | || |
|
|
| T |
22353706 |
aaaatgcaaaggattacctctcgcaattgtagtcataggtaatattttatctcgcaaagatagaaatccaattgaatggtctaagtttagtgaaaatata |
22353607 |
T |
|
| Q |
256 |
aatatagagttaaaagaagatttgaagatnnnnnnnnttgtaggtctcggttaccatgatttgtctt-acaatctcaagtcatgtttgttgtattttgga |
354 |
Q |
| |
|
||| ||||||| | ||| ||| | || || |||| | |||||||||||||| ||| || | |||||||||||||| |||||||||||| |
|
|
| T |
22353606 |
aatgcagagttagaggaatattccataataagaaaaattttaggatttagttaccatgatttgcctttactacctcaagtcatgtttcttgtattttgga |
22353507 |
T |
|
| Q |
355 |
ttatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatg |
454 |
Q |
| |
|
||||||| |||| | |||| | || ||| ||||| ||| |||||||| ||||| || || |||||||| | | | || ||| ||||||| | |
|
|
| T |
22353506 |
ttatatctcgaagactacgaagtttattcagatacattgactcgtcaatggattgctgaggggtttgtgaaagaatacgggggaaggacaatggaagagg |
22353407 |
T |
|
| Q |
455 |
ttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgttgtgttcatgatct |
554 |
Q |
| |
|
||||||| |||||||||| ||| || ||| |||| ||||||||||||||| |||| | |||||||||||||||| |||||||||| ||||||| ||||| |
|
|
| T |
22353406 |
ttgcagaaggatatttaaaagagttaatccatagaagtttggtgcaagtagattcagtcagtattgatggaagagtaaaaagttgtcgtgttcacgatct |
22353307 |
T |
|
| Q |
555 |
agtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattagcgaggatgaccaatcatctttaggtgggatggttcgacgccta |
654 |
Q |
| |
|
||| |||| | |||||||| ||||| ||| || |||||||||||||||||||||| |||| | | ||| || ||| ||| ||| || |||||||| |
|
|
| T |
22353306 |
agtgcatgaaatgatccttagaaaatatgaggatttaagtttttgcaagaatatta-cgagca--aacaactgtcattaactggaatgatttgacgccta |
22353210 |
T |
|
| Q |
655 |
tcaatagcaatcagatctgataatttcatggaaaatattgaaaactcacaggttc |
709 |
Q |
| |
|
|||||||||| || |||||||| || ||| ||| ||||||||||||||| |||| |
|
|
| T |
22353209 |
tcaatagcaactagttctgataagttaatgaaaagtattgaaaactcacatgttc |
22353155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 17 - 250
Target Start/End: Complemental strand, 22431205 - 22430972
Alignment:
| Q |
17 |
aatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttg |
116 |
Q |
| |
|
|||||||||||||||||||| ||||||| |||||||| | |||||| ||||||| || |||||||||||||| ||||| ||||| | |||| ||| |
|
|
| T |
22431205 |
aatcttcttttgttgaagtgcatgaacttaaaggtttaaccgaagaaaaatctttagaattgttcaataagaaagtgttccatgacttgagcggatattg |
22431106 |
T |
|
| Q |
117 |
tccagaaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatcttgcaaagat |
216 |
Q |
| |
|
||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
22431105 |
tccagaaaatcttatagatatatcttccaaaattgttgaaaaatgcaatggattaccactcgcaattgtagtcattggtggtattttagcttgcaaagat |
22431006 |
T |
|
| Q |
217 |
agaaatacatcagaatggtataagtttagtgaaa |
250 |
Q |
| |
|
|| ||| || ||||||| |||||||||||||| |
|
|
| T |
22431005 |
aggaatccaattgaatggtctaagtttagtgaaa |
22430972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 305 - 608
Target Start/End: Complemental strand, 22430914 - 22430611
Alignment:
| Q |
305 |
gttaccatgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatg |
404 |
Q |
| |
|
|||||||||||||| ||| ||| |||||||||||||| ||||||||||||||||||||| ||| | ||||||| | |||| | ||| | | | ||||| |
|
|
| T |
22430914 |
gttaccatgatttgccttgcaacctcaagtcatgtttcttgtattttggattatatcctaaagactatatagtttattcaaagacattaacttgtcaatg |
22430815 |
T |
|
| Q |
405 |
gatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagta |
504 |
Q |
| |
|
||| |||||||| || |||||||| | | | || |||||| |||| |||||||| |||||||||| ||| |||||| |||| |||||||||||||| |
|
|
| T |
22430814 |
gattgctgaagggtttgtgaaagaaaaaacgggaaggacattgaaagaggttgcagaaggatatttaatagagttgatccatagaagtttggtgcaagta |
22430715 |
T |
|
| Q |
505 |
gtttcaattagtattgatggaagagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaaga |
604 |
Q |
| |
|
| |||||| |||||||||||||||| || ||||||| |||||||||||||||| |||| | |||||||| |||||| ||| || ||||| ||||| ||| |
|
|
| T |
22430714 |
gattcaataagtattgatggaagagtaagaagttgtcgtgttcatgatctagtgcatgaaatgatccttaaaaaatatgaggatttaagcttttgtaagt |
22430615 |
T |
|
| Q |
605 |
atat |
608 |
Q |
| |
|
|||| |
|
|
| T |
22430614 |
atat |
22430611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 334 - 664
Target Start/End: Complemental strand, 22620599 - 22620269
Alignment:
| Q |
334 |
tcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgaaggattcgtgaaagatgata |
433 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||| || || |||| | |||| | |||||||||||||||||| |||||||| || || ||||| || | |
|
|
| T |
22620599 |
tcatgtttattgtattttggattatatccagaagattataaagttgattcaaagagattgattcggcaatggatagctgaagggtttgtaaaagaagaaa |
22620500 |
T |
|
| Q |
434 |
gcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaa |
533 |
Q |
| |
|
| | || || |||||||| |||||||| ||||| |||||||| |||||| |||| |||||||||||||| |||| | || || ||||||| | |||| |
|
|
| T |
22620499 |
gggggaatactttggaagaagttgcagaaggatacttaacagagttgatccatagaagtttggtgcaagtatcttcactaagaatcgatggaaaaacaaa |
22620400 |
T |
|
| Q |
534 |
aagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattagcgaggatgaccaatcatcttta |
633 |
Q |
| |
|
||||||||| |||||||||||| | | | |||| |||||||| ||||| || |||||||||||||| ||||||| || ||| || ||||||||| |
|
|
| T |
22620399 |
aagttgttgcgttcatgatctaatacgtatgatgatacttgaaaagtgtgaggatctaagtttttgcaagtatattagtgaagattgtcattcatcttta |
22620300 |
T |
|
| Q |
634 |
ggtgggatggttcgacgcctatcaatagcaa |
664 |
Q |
| |
|
||| | |||||||||||||||||||| |
|
|
| T |
22620299 |
agtgaagttactcgacgcctatcaatagcaa |
22620269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 326 - 660
Target Start/End: Complemental strand, 22656777 - 22656443
Alignment:
| Q |
326 |
atctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgaaggattcgtgaa |
425 |
Q |
| |
|
|||| |||||||||||||||||||||||| ||||||| |||| || | |||| |||| | | |||| ||||||||||| |||||||| || ||||| |
|
|
| T |
22656777 |
atcttaagtcatgtttgttgtattttggaatatatccagaagattatgaagttgaatcaaagagagtgatacggcaatggatagctgaaggttttgtgaa |
22656678 |
T |
|
| Q |
426 |
agatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatgga |
525 |
Q |
| |
|
||| || || | ||||| |||||||| |||||||| |||||||||||||| ||||| | || ||||||| |||||| ||| |||| ||||| ||| |
|
|
| T |
22656677 |
agaagaaagggggaaaactttggaagaagttgcagaaggatatttaacagagttgattcgccgatgtttggtacaagtatcctcagttagaattgacgga |
22656578 |
T |
|
| Q |
526 |
agagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattagcgaggatgaccaat |
625 |
Q |
| |
|
| | | |||||||||||||| |||||| || | ||| ||||||||||||| ||||| || |||||||| |||||| ||||||| | |||| ||| | |
|
|
| T |
22656577 |
aaaactaaaagttgttgtgtccatgatttaatacatatgatgatccttgaaaagtgtgaggatttaagtttctgcaagcatattagtgcagatggccatt |
22656478 |
T |
|
| Q |
626 |
catctttaggtgggatggttcgacgcctatcaata |
660 |
Q |
| |
|
||||| || |||| || ||||||||||||||||| |
|
|
| T |
22656477 |
catctataagtggaattattcgacgcctatcaata |
22656443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 305 - 603
Target Start/End: Complemental strand, 30989037 - 30988739
Alignment:
| Q |
305 |
gttaccatgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatg |
404 |
Q |
| |
|
||||| |||||||| ||||| |||||||||||| ||||||||||||||| ||||||| |||| || | |||| |||| | ||||||||| ||||| |
|
|
| T |
30989037 |
gttacgatgatttgccttactctctcaagtcatgcttgttgtattttggaatatatccagaagattatgaagttaaatcaaagagattgattcgacaatg |
30988938 |
T |
|
| Q |
405 |
gatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagta |
504 |
Q |
| |
|
| | |||||||| |||||||| || || || | || || |||||||| |||||||| |||||||||||||| |||||| |||| | |||||||||||| |
|
|
| T |
30988937 |
ggtagctgaagggttcgtgaaggaggaaagagggaagactttggaagacgttgcagaaggatatttaacagagttgatccatagaagcttggtgcaagta |
30988838 |
T |
|
| Q |
505 |
gtttcaattagtattgatggaagagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaag |
603 |
Q |
| |
|
||| |||| ||||||| | ||| ||| ||||| |||||||||||||| | | | ||||||||||||||| ||| || |||| |||||||||| |
|
|
| T |
30988837 |
tcttcggttagagttgatggtaaagctaaaggttgtcgtgttcatgatctaatacgcgatatgatccttgaaaaatttgaggatttaaatttttgcaag |
30988739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 442 - 610
Target Start/End: Complemental strand, 37930467 - 37930298
Alignment:
| Q |
442 |
acattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgtt |
541 |
Q |
| |
|
||||||||| | ||||| || |||||||||| ||| || ||| ||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| |
|
|
| T |
37930467 |
acattggaaaaggttgcggaaggatatttaaaagagttaatctgtagaagtttggtgcaagtagtttcaaccggtattgatggaagagtaaaaagttgtc |
37930368 |
T |
|
| Q |
542 |
gtgttcatgatctagtccatgcattgatcctt-gaaaaatgtgaagaattaagtttttgcaagaatatta |
610 |
Q |
| |
|
|||||||||||||||| |||| | |||||||| || |||| | || |||||||||||| ||||||||| |
|
|
| T |
37930367 |
gtgttcatgatctagtgcatgaaatgatcctttgacaaatttatggatttaagtttttgcgagaatatta |
37930298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 311 - 555
Target Start/End: Original strand, 21946364 - 21946608
Alignment:
| Q |
311 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggc |
410 |
Q |
| |
|
|||||||| ||| | ||||||||||||| ||||| ||||||||| ||||||| |||| || | |||| | || | | ||||||| |||||||| || |
|
|
| T |
21946364 |
atgatttgccttgctatctcaagtcatgcttgttttattttggagtatatccagaagattatgaagttaaatcgaagagagtgattcgacaatggatagc |
21946463 |
T |
|
| Q |
411 |
tgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttca |
510 |
Q |
| |
|
|||||| || ||||| || || || | || || |||||||| || ||||| |||||||||||||| |||||| |||| | |||| |||||| |||| |
|
|
| T |
21946464 |
tgaagggtttgtgaaggaggaaagagggaagactttggaagaagtggcagaaggatatttaacagagttgatccatagaagcctggttcaagtatcttca |
21946563 |
T |
|
| Q |
511 |
attagtattgatggaagagcaaaaagttgttgtgttcatgatcta |
555 |
Q |
| |
|
|||| |||||||| | ||| ||| ||||| |||||||||||||| |
|
|
| T |
21946564 |
cttagaattgatggtaaagctaaaggttgtcgtgttcatgatcta |
21946608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 445 - 633
Target Start/End: Complemental strand, 22647776 - 22647588
Alignment:
| Q |
445 |
ttggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgttgtg |
544 |
Q |
| |
|
|||||||| |||||||| |||||||||| || |||||| |||| ||||||| |||||| |||| |||| |||||||||| | | |||||||| |||| |
|
|
| T |
22647776 |
ttggaagaagttgcagaacgatatttaactgagttgatccatagaagtttggttcaagtatcttcagttagaattgatggaaaaactaaaagttgctgtg |
22647677 |
T |
|
| Q |
545 |
ttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattagcgaggatgaccaatcatcttta |
633 |
Q |
| |
|
|||||||||| | ||| ||||||||||||| |||| || ||||||| |||||| ||||||| || ||||| | ||||||||| |
|
|
| T |
22647676 |
ttcatgatctgatacatatgatgatccttgaaaagagtgaggatataagtttctgcaagcatattagtgaagatgatctttcatcttta |
22647588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 311 - 362
Target Start/End: Original strand, 22180157 - 22180208
Alignment:
| Q |
311 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcc |
362 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
22180157 |
atgatttgccttactatctcaagtcatgtttgttgtattttggagtatatcc |
22180208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 207
Target Start/End: Complemental strand, 22620946 - 22620753
Alignment:
| Q |
17 |
aatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattccac---gacttaaacggacg |
113 |
Q |
| |
|
||||||||||| |||| ||| ||||||| || ||| |||| ||||||||||| |||||||||||||||||| ||| | ||||| | ||| | |
|
|
| T |
22620946 |
aatcttcttttattgaggtgcatgaactacaacctttaactgaggaacaatcttttgagttgttcaataagaaggtatttcgatttgactttgatggaag |
22620847 |
T |
|
| Q |
114 |
ttgtccagaaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatct |
207 |
Q |
| |
|
||||||| || |||| |||||||||||||| |||||| | ||||||||| || || ||||||||||||||| | |||||||| |||||||| |
|
|
| T |
22620846 |
ttgtccaaaagatctaattgatatatcttccgaaattgctagaaaatgcaagggtttaccactagcaattgtagccgttggtggtcttttatct |
22620753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 311 - 657
Target Start/End: Original strand, 21937893 - 21938239
Alignment:
| Q |
311 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggc |
410 |
Q |
| |
|
|||||||| ||||| ||||||||||||| ||||||||||||||| ||||||| |||| || | | || |||| | | | ||||| |||||||| || |
|
|
| T |
21937893 |
atgatttgccttactatctcaagtcatgcttgttgtattttggagtatatccagaagattttgaaattagaccaaagagagtcattcgacaatggatagc |
21937992 |
T |
|
| Q |
411 |
tgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttca |
510 |
Q |
| |
|
||||||||| ||||| || || | | ||| || ||||||| || ||||| |||||| ||||||| ||||| |||| | |||| |||||| ||| |
|
|
| T |
21937993 |
tgaaggatttgtgaaggaggaaaagggaaagactatggaagaagtggcagagggatatctaacagagttgatacatagaagcctggttcaagtatcctca |
21938092 |
T |
|
| Q |
511 |
attagtattgatggaagagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatatta |
610 |
Q |
| |
|
|||| |||||||| | ||| ||| ||||| |||||||||||||| | | || |||||||||||||| ||| || || | |||||||||| |||| | |
|
|
| T |
21938093 |
cttagaattgatggcaaagctaaaggttgtcgtgttcatgatctaatacgtgatatgatccttgaaaaagatgaggattttaatttttgcaagcatatca |
21938192 |
T |
|
| Q |
611 |
gcgaggatgaccaatcatctttaggtgggatggttcgacgcctatca |
657 |
Q |
| |
|
| || |||| ||| ||| ||| |||| || ||||| ||||||||| |
|
|
| T |
21938193 |
gtgatgatggacaaagatccttaagtggaatagttcggcgcctatca |
21938239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 311 - 553
Target Start/End: Original strand, 22115825 - 22116067
Alignment:
| Q |
311 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggc |
410 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||||||||||||||| |||| || |||| || | |||| |||| | | | | ||| |||||||| || |
|
|
| T |
22115825 |
atgatttgccttactatctcaagtcatgtttgttgtattttggagtatacccagaagattttgaagttaaatcaaagagaatcactcgacaatggatagc |
22115924 |
T |
|
| Q |
411 |
tgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttca |
510 |
Q |
| |
|
|||||| || ||||| || || || | ||| || |||| || || ||||| |||||| ||||||| |||||| |||| || |||| |||||| ||| |
|
|
| T |
22115925 |
tgaagggtttgtgaaggaggaaaggggaaagactatggatgaagtggcagagggatatataacagagttgatccatagaagtatggttcaagtatcttcg |
22116024 |
T |
|
| Q |
511 |
attagtattgatggaagagcaaaaagttgttgtgttcatgatc |
553 |
Q |
| |
|
|||| |||||||| | ||| ||| ||||| |||||||||||| |
|
|
| T |
22116025 |
cttagaattgatggcaaagctaaaggttgtcgtgttcatgatc |
22116067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 311 - 555
Target Start/End: Original strand, 22053446 - 22053690
Alignment:
| Q |
311 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggc |
410 |
Q |
| |
|
|||||||| ||||| ||||| ||||||| ||||||||||||||| ||||||| |||| || | |||| | |||| | ||||||| |||||||| || |
|
|
| T |
22053446 |
atgatttgccttactatctcgagtcatgcttgttgtattttggagtatatccagaagattatgaagttaattcaaagcgagtgattcgacaatggatagc |
22053545 |
T |
|
| Q |
411 |
tgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttca |
510 |
Q |
| |
|
||||| || ||||| || || | | || || |||||||| || ||||| ||||||||| |||| |||||| |||| | |||| |||||| |||| |
|
|
| T |
22053546 |
agaagggtttgtgaaggaggaaaaggggaagactttggaagaagtggcagaaggatatttatcagagttgatccatagaagcctggttcaagtatcttca |
22053645 |
T |
|
| Q |
511 |
attagtattgatggaagagcaaaaagttgttgtgttcatgatcta |
555 |
Q |
| |
|
|||| |||||||| | ||| ||| | ||| |||||||||||||| |
|
|
| T |
22053646 |
cttagaattgatggcaaagctaaaggatgtcgtgttcatgatcta |
22053690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 22187424 - 22187501
Alignment:
| Q |
19 |
tcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattc |
96 |
Q |
| |
|
||||||||| |||| ||| |||||||| || ||| || ||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
22187424 |
tcttcttttattgaggtgcatgaactgcaacctttatctctagaacaatctttggagttgttcaataagaaggcattc |
22187501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 311 - 367
Target Start/End: Original strand, 22028740 - 22028796
Alignment:
| Q |
311 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaag |
367 |
Q |
| |
|
|||||||| ||||| |||||||| |||| ||||||||||||||| ||||||| |||| |
|
|
| T |
22028740 |
atgatttgccttactatctcaagccatgcttgttgtattttggagtatatccagaag |
22028796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 311 - 367
Target Start/End: Original strand, 22035257 - 22035313
Alignment:
| Q |
311 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaag |
367 |
Q |
| |
|
|||||||| ||||| |||||||| |||| ||||||||||||||| ||||||| |||| |
|
|
| T |
22035257 |
atgatttgccttactatctcaagccatgcttgttgtattttggagtatatccagaag |
22035313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 311 - 367
Target Start/End: Original strand, 22105448 - 22105504
Alignment:
| Q |
311 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaag |
367 |
Q |
| |
|
|||||||| ||||| ||||||||||||| |||||||| |||||| ||||||| |||| |
|
|
| T |
22105448 |
atgatttgccttactatctcaagtcatgcttgttgtactttggagtatatccagaag |
22105504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 311 - 367
Target Start/End: Original strand, 22187728 - 22187784
Alignment:
| Q |
311 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaag |
367 |
Q |
| |
|
|||||||| ||||| |||||||| |||| ||||||||||||||| ||||||| |||| |
|
|
| T |
22187728 |
atgatttgccttactatctcaagccatgcttgttgtattttggagtatatccagaag |
22187784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 96
Target Start/End: Original strand, 21930899 - 21930934
Alignment:
| Q |
61 |
gaacaatctttggagttgttcaataagaagacattc |
96 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| |
|
|
| T |
21930899 |
gaacaatctttggagttgttcaataagaaggcattc |
21930934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 96
Target Start/End: Original strand, 21937631 - 21937666
Alignment:
| Q |
61 |
gaacaatctttggagttgttcaataagaagacattc |
96 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| |
|
|
| T |
21937631 |
gaacaatctttggagttgttcaataagaaggcattc |
21937666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 401 - 660
Target Start/End: Original strand, 22180247 - 22180506
Alignment:
| Q |
401 |
aatggatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgca |
500 |
Q |
| |
|
||||||| |||||||| || ||||| || || | | ||||||| ||||||| || ||||| |||||| ||||||| |||||| |||| | |||| || |
|
|
| T |
22180247 |
aatggatagctgaagggtttgtgaaggaggaaaagggaaaaacaatggaagaagtggcagagggatatctaacagagttgatccatagaagcctggttca |
22180346 |
T |
|
| Q |
501 |
agtagtttcaattagtattgatggaagagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgc |
600 |
Q |
| |
|
|||| ||| |||| |||||||| | ||| ||| ||||| |||||||||||||| | | || |||||||| ||||| ||| || || | ||||||| |
|
|
| T |
22180347 |
agtatcttcgcttagaattgatggcaaagctaaaggttgtcgtgttcatgatctaatacgtgatatgatccttcaaaaaaatgaggattttaatttttgc |
22180446 |
T |
|
| Q |
601 |
aagaatattagcgaggatgaccaatcatctttaggtgggatggttcgacgcctatcaata |
660 |
Q |
| |
|
||| ||||||| || |||| || ||| ||| |||| || ||||| |||||||||||| |
|
|
| T |
22180447 |
aagcatattagtgatgatggacagatatccttaagtggaatagttcggcgcctatcaata |
22180506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 96
Target Start/End: Complemental strand, 30989297 - 30989258
Alignment:
| Q |
57 |
tgaagaacaatctttggagttgttcaataagaagacattc |
96 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
30989297 |
tgaacaacaatctttggagttgttcaataagaaggcattc |
30989258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 445 - 555
Target Start/End: Original strand, 21931295 - 21931405
Alignment:
| Q |
445 |
ttggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgttgtg |
544 |
Q |
| |
|
|||||||| || ||||| |||||||||||||| |||||| |||| | | || |||||| |||| |||| |||||||| | ||| ||| ||||| ||| |
|
|
| T |
21931295 |
ttggaagaagtggcagaaggatatttaacagagttgatccatagaagcctcgttcaagtatcttcacttagaattgatggcaaagctaaaggttgtcgtg |
21931394 |
T |
|
| Q |
545 |
ttcatgatcta |
555 |
Q |
| |
|
||||||||||| |
|
|
| T |
21931395 |
ttcatgatcta |
21931405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 22028436 - 22028506
Alignment:
| Q |
19 |
tcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaa |
89 |
Q |
| |
|
||||||||| |||| ||| |||||||| || ||| || |||||||||||||||||||||||||||||| |
|
|
| T |
22028436 |
tcttcttttattgaggtgcatgaactgcaacctttatctctagaacaatctttggagttgttcaataagaa |
22028506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 466 - 600
Target Start/End: Complemental strand, 22614842 - 22614708
Alignment:
| Q |
466 |
tatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgttgtgttcatgatctagtccatgcat |
565 |
Q |
| |
|
|||||| |||| ||||| | |||| ||||||||||| | ||| |||| ||||||||||| || ||||||||| |||||||||||||| | | || |
|
|
| T |
22614842 |
tatttatcagagttgattaatagaagtttggtgcaaatctcttcgattaatattgatggaaaagttaaaagttgtcgtgttcatgatctattacgtgtga |
22614743 |
T |
|
| Q |
566 |
tgatccttgaaaaatgtgaagaattaagtttttgc |
600 |
Q |
| |
|
||||| ||||||||| | | || |||||||||||| |
|
|
| T |
22614742 |
tgatctttgaaaaatttaaggatttaagtttttgc |
22614708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 390 - 476
Target Start/End: Complemental strand, 22628182 - 22628096
Alignment:
| Q |
390 |
attgattcggcaatggatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacaga |
476 |
Q |
| |
|
||||||||| |||| ||| ||||||||||| |||||||| || || | |||||| || ||||| || |||| |||||||||||||| |
|
|
| T |
22628182 |
attgattcgacaattgatagctgaaggatttgtgaaagaagaaaggggaaaaactttcgaagaagtcacagaaggatatttaacaga |
22628096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 56; Significance: 8e-23; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 400 - 603
Target Start/End: Original strand, 34990046 - 34990249
Alignment:
| Q |
400 |
caatggatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgc |
499 |
Q |
| |
|
|||||||| |||||||| || |||||||| || || | || || |||||||| |||| ||| ||||||||||||| ||||| ||||| ||||||||| |
|
|
| T |
34990046 |
caatggatagctgaagggtttgtgaaagaggaaagtgggaagactttggaagaagttgaagaaagatatttaacagagttgattcgtagaagtttggtgc |
34990145 |
T |
|
| Q |
500 |
aagtagtttcaattagtattgatggaagagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttg |
599 |
Q |
| |
|
||||| ||| |||| |||||||||| | | | ||||||||||||||||||||| | ||| ||||||||||||| ||||| || ||||||||||| |
|
|
| T |
34990146 |
aagtatcctcagttagcattgatggaaaaactagaagttgttgtgttcatgatctgatacatatgatgatccttgaaaagtgtgaggatttaagtttttg |
34990245 |
T |
|
| Q |
600 |
caag |
603 |
Q |
| |
|
|||| |
|
|
| T |
34990246 |
caag |
34990249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 445 - 664
Target Start/End: Original strand, 34976245 - 34976464
Alignment:
| Q |
445 |
ttggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgttgtg |
544 |
Q |
| |
|
|||||||| |||||| | |||||||||||||| ||||| || || |||||||||||||| ||| |||| |||||||||| | ||||||||||||| |
|
|
| T |
34976245 |
ttggaagaagttgcaaaaggatatttaacagagttgattcgtcgaagtttggtgcaagtatcctcagttagaattgatggaaagcctaaaagttgttgtg |
34976344 |
T |
|
| Q |
545 |
ttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattagcgaggatgaccaatcatctttaggtgggatggt |
644 |
Q |
| |
|
|||||||||| | | | ||||||||||||| ||||| || ||||||||||||||| || | | || |||| || ||||||||| |||| | | |
|
|
| T |
34976345 |
ttcatgatctgatacgtatgatgatccttgaaaagtgtgaggatttaagtttttgcaagcatttcaatgaagatggtcattcatctttaagtggaactat |
34976444 |
T |
|
| Q |
645 |
tcgacgcctatcaatagcaa |
664 |
Q |
| |
|
| |||||||||||||||||| |
|
|
| T |
34976445 |
tagacgcctatcaatagcaa |
34976464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 445 - 664
Target Start/End: Original strand, 34983356 - 34983575
Alignment:
| Q |
445 |
ttggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgttgtg |
544 |
Q |
| |
|
|||||||| |||||| | |||||||||||||| ||||| || || |||||||||||||| ||| |||| |||||||||| | ||||||||||||| |
|
|
| T |
34983356 |
ttggaagaagttgcaaaaggatatttaacagagttgattcgtcgaagtttggtgcaagtatcctcagttagaattgatggaaagcctaaaagttgttgtg |
34983455 |
T |
|
| Q |
545 |
ttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattagcgaggatgaccaatcatctttaggtgggatggt |
644 |
Q |
| |
|
|||||||||| | | | ||||||||||||| ||||| || ||||||||||||||| || | | || |||| || ||||||||| |||| | | |
|
|
| T |
34983456 |
ttcatgatctgatacgtatgatgatccttgaaaagtgtgaggatttaagtttttgcaagcatttcaatgaagatggtcattcatctttaagtggaactat |
34983555 |
T |
|
| Q |
645 |
tcgacgcctatcaatagcaa |
664 |
Q |
| |
|
| |||||||||||||||||| |
|
|
| T |
34983556 |
tagacgcctatcaatagcaa |
34983575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 392 - 554
Target Start/End: Complemental strand, 2305131 - 2304969
Alignment:
| Q |
392 |
tgattcggcaatggatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagagg |
491 |
Q |
| |
|
||||||| || ||||| |||||||| || ||||| || || || | || || |||||||| |||||||| ||||||||| |||| ||||| || || | |
|
|
| T |
2305131 |
tgattcgacagtggatagctgaagggtttgtgaaggaggaaagtgggaagactttggaagaagttgcagaaggatatttatcagagttgattcgtcgaag |
2305032 |
T |
|
| Q |
492 |
tttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgttgtgttcatgatct |
554 |
Q |
| |
|
||||||||||||| ||| |||| |||||||||| | | ||||||||||||||||||||||| |
|
|
| T |
2305031 |
tttggtgcaagtatcctcagttagcattgatggaaaatctaaaagttgttgtgttcatgatct |
2304969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 537 - 611
Target Start/End: Complemental strand, 872224 - 872150
Alignment:
| Q |
537 |
ttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattag |
611 |
Q |
| |
|
|||| |||||||||||||| | |||| |||||||||||||||| ||| || |||| |||||||||| ||||||| |
|
|
| T |
872224 |
ttgtcgtgttcatgatctactacatgatttgatccttgaaaaatttgaggatttaaatttttgcaagcatattag |
872150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 537 - 611
Target Start/End: Complemental strand, 1233501 - 1233427
Alignment:
| Q |
537 |
ttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaagaatattag |
611 |
Q |
| |
|
|||| |||||||||||||| | |||| |||||||||||||||| ||| || |||| |||||||||| ||||||| |
|
|
| T |
1233501 |
ttgtcgtgttcatgatctactacatgatttgatccttgaaaaatttgaggatttaaatttttgcaagcatattag |
1233427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 403 - 603
Target Start/End: Original strand, 40580766 - 40580966
Alignment:
| Q |
403 |
tggatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaag |
502 |
Q |
| |
|
||||| |||||||| || ||||| || || || | ||| || |||||||| ||||| || | ||||||||| || ||||| || | |||||||||||| |
|
|
| T |
40580766 |
tggatagctgaagggtttgtgaaggaggaaagtggaaagactttggaagaagttgctgaagtatatttaactgagttgattcgtcgtagtttggtgcaag |
40580865 |
T |
|
| Q |
503 |
tagtttcaattagtattgatggaagagcaaaaagttgttgtgttcatgatctagtccatgcattgatccttgaaaaatgtgaagaattaagtttttgcaa |
602 |
Q |
| |
|
|| |||||||| |||||||||| | | |||||||||| |||||| ||| | | | | |||||| |||||| ||||| ||||||||||||||||| |
|
|
| T |
40580866 |
tatcctcaattagaattgatggaaaaactaaaagttgttttgttcacgatttgatacgtatgatgatccatgaaaagtgtgaggaattaagtttttgcaa |
40580965 |
T |
|
| Q |
603 |
g |
603 |
Q |
| |
|
| |
|
|
| T |
40580966 |
g |
40580966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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