View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1952_low_3 (Length: 713)

Name: NF1952_low_3
Description: NF1952
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1952_low_3
NF1952_low_3
[»] chr5 (58 HSPs)
chr5 (92-713)||(1722340-1722963)
chr5 (184-563)||(20728790-20729169)
chr5 (184-567)||(36418143-36418538)
chr5 (201-567)||(13543366-13543740)
chr5 (194-568)||(5734448-5734833)
chr5 (194-395)||(19278977-19279179)
chr5 (184-563)||(35190167-35190546)
chr5 (184-563)||(26275494-26275869)
chr5 (417-567)||(18951289-18951439)
chr5 (200-545)||(30737748-30738102)
chr5 (300-564)||(18248947-18249220)
chr5 (433-563)||(6336133-6336263)
chr5 (418-564)||(20728517-20728663)
chr5 (184-400)||(38405198-38405416)
chr5 (417-553)||(32660199-32660335)
chr5 (452-567)||(14235554-14235669)
chr5 (184-369)||(18320898-18321083)
chr5 (399-553)||(19278705-19278858)
chr5 (433-546)||(32660266-32660379)
chr5 (442-553)||(36417886-36417997)
chr5 (412-551)||(5734964-5735102)
chr5 (490-553)||(32459427-32459490)
chr5 (418-548)||(30738248-30738377)
chr5 (491-553)||(35891263-35891325)
chr5 (502-567)||(26276012-26276077)
chr5 (423-564)||(31813886-31814017)
chr5 (313-545)||(35189922-35190153)
chr5 (464-548)||(18951368-18951452)
chr5 (405-567)||(13543070-13543235)
chr5 (412-514)||(6336310-6336412)
chr5 (490-541)||(18238339-18238390)
chr5 (428-486)||(35891260-35891318)
chr5 (478-546)||(18237919-18237987)
chr5 (399-486)||(18237919-18238006)
chr5 (399-486)||(32459434-32459521)
chr5 (309-386)||(38082723-38082800)
chr5 (459-567)||(13538455-13538563)
chr5 (497-548)||(19279239-19279290)
chr5 (478-548)||(1722964-1723034)
chr5 (309-359)||(13543289-13543339)
chr5 (309-355)||(20728734-20728780)
chr5 (417-486)||(6336150-6336219)
chr5 (309-366)||(19278900-19278957)
chr5 (497-550)||(32660322-32660375)
chr5 (463-564)||(38405569-38405670)
chr5 (417-486)||(38405583-38405652)
chr5 (405-481)||(18238314-18238390)
chr5 (434-486)||(36417893-36417945)
chr5 (126-182)||(36418285-36418341)
chr5 (405-457)||(41282474-41282526)
chr5 (286-373)||(5734830-5734917)
chr5 (510-553)||(23251658-23251701)
chr5 (491-550)||(30738261-30738320)
chr5 (309-368)||(32459552-32459611)
chr5 (478-553)||(34444914-34444989)
chr5 (405-454)||(14620780-14620829)
chr5 (501-550)||(35189976-35190025)
chr5 (320-373)||(38405436-38405489)
[»] chr7 (106 HSPs)
chr7 (184-567)||(27995047-27995439)
chr7 (184-565)||(39958940-39959330)
chr7 (184-567)||(5559093-5559489)
chr7 (184-558)||(42990495-42990879)
chr7 (184-567)||(33235297-33235690)
chr7 (265-564)||(28256482-28256791)
chr7 (184-546)||(1348904-1349269)
chr7 (184-395)||(1441124-1441334)
chr7 (187-554)||(8039910-8040271)
chr7 (187-563)||(35215072-35215458)
chr7 (184-350)||(20184029-20184195)
chr7 (411-566)||(20366520-20366675)
chr7 (194-567)||(23679292-23679659)
chr7 (418-564)||(33879505-33879651)
chr7 (432-548)||(21412931-21413047)
chr7 (412-563)||(19925321-19925472)
chr7 (184-395)||(5805301-5805511)
chr7 (309-563)||(5805028-5805291)
chr7 (442-564)||(31893489-31893611)
chr7 (418-567)||(5805583-5805731)
chr7 (412-567)||(23150625-23150780)
chr7 (308-553)||(35214806-35215060)
chr7 (417-563)||(21412856-21413002)
chr7 (442-567)||(5559631-5559755)
chr7 (303-395)||(5075450-5075542)
chr7 (417-564)||(36566267-36566414)
chr7 (412-567)||(20366035-20366188)
chr7 (412-563)||(34951218-34951368)
chr7 (184-289)||(29590850-29590955)
chr7 (421-543)||(29591047-29591171)
chr7 (412-545)||(33235042-33235175)
chr7 (309-549)||(1286374-1286621)
chr7 (417-553)||(21433144-21433280)
chr7 (434-553)||(1346480-1346599)
chr7 (431-553)||(40904691-40904813)
chr7 (453-550)||(33879480-33879577)
chr7 (468-564)||(34951501-34951597)
chr7 (416-567)||(19925091-19925241)
chr7 (463-550)||(40904754-40904841)
chr7 (433-550)||(36566341-36566458)
chr7 (442-564)||(41020137-41020258)
chr7 (478-563)||(27995569-27995654)
chr7 (442-567)||(31893236-31893361)
chr7 (442-568)||(22876867-22876992)
chr7 (339-563)||(1286706-1286936)
chr7 (478-546)||(10619867-10619935)
chr7 (478-550)||(31175946-31176018)
chr7 (442-553)||(1441446-1441557)
chr7 (412-502)||(4187673-4187763)
chr7 (309-502)||(10619851-10620052)
chr7 (478-548)||(20101887-20101956)
chr7 (442-548)||(34951415-34951521)
chr7 (475-564)||(8039652-8039741)
chr7 (442-563)||(39958677-39958798)
chr7 (478-550)||(1286433-1286505)
chr7 (417-485)||(21433323-21433391)
chr7 (501-549)||(31893437-31893485)
chr7 (442-550)||(31893438-31893537)
chr7 (286-373)||(1348830-1348917)
chr7 (399-553)||(20183769-20183923)
chr7 (300-375)||(42990880-42990955)
chr7 (490-548)||(4187691-4187749)
chr7 (475-549)||(21433208-21433282)
chr7 (459-545)||(21433305-21433391)
chr7 (309-373)||(8039835-8039900)
chr7 (309-373)||(5559499-5559563)
chr7 (506-550)||(28256954-28256998)
chr7 (433-544)||(4187515-4187626)
chr7 (413-524)||(31175941-31176052)
chr7 (497-567)||(1440992-1441062)
chr7 (454-564)||(5075337-5075446)
chr7 (450-548)||(19925170-19925267)
chr7 (309-395)||(20366408-20366494)
chr7 (491-553)||(28104297-28104359)
chr7 (417-486)||(1441481-1441550)
chr7 (417-486)||(8039670-8039739)
chr7 (502-563)||(36566526-36566587)
chr7 (478-546)||(6220365-6220432)
chr7 (431-563)||(20101813-20101943)
chr7 (309-369)||(31175825-31175885)
chr7 (184-247)||(20366310-20366373)
chr7 (399-486)||(28104304-28104391)
chr7 (417-488)||(31893255-31893326)
chr7 (417-487)||(1349200-1349270)
chr7 (184-242)||(10620054-10620112)
chr7 (417-483)||(29591105-29591171)
chr7 (184-225)||(1286631-1286672)
chr7 (417-486)||(22876902-22876970)
chr7 (450-563)||(28256958-28257071)
chr7 (417-486)||(39958694-39958763)
chr7 (417-486)||(40904698-40904767)
chr7 (309-365)||(20183963-20184019)
chr7 (309-365)||(29590972-29591028)
chr7 (417-457)||(42888993-42889033)
chr7 (92-123)||(1441399-1441430)
chr7 (92-123)||(27995197-27995228)
chr7 (308-386)||(28256817-28256894)
chr7 (491-550)||(29591057-29591118)
chr7 (417-486)||(1346487-1346556)
chr7 (497-546)||(4187573-4187622)
chr7 (421-490)||(5075351-5075420)
chr7 (417-486)||(5559666-5559734)
chr7 (502-547)||(10620239-10620284)
chr7 (506-547)||(19925230-19925271)
chr7 (478-547)||(21413099-21413167)
chr7 (497-550)||(33235097-33235150)
[»] chr8 (81 HSPs)
chr8 (202-566)||(25737090-25737462)
chr8 (184-564)||(23553343-23553739)
chr8 (184-556)||(8714108-8714490)
chr8 (184-563)||(30576414-30576803)
chr8 (184-567)||(39701146-39701540)
chr8 (210-538)||(6235747-6236082)
chr8 (188-566)||(9276749-9277129)
chr8 (309-568)||(8713830-8714098)
chr8 (412-567)||(9770778-9770933)
chr8 (184-553)||(4613739-4614118)
chr8 (303-564)||(31169361-31169628)
chr8 (412-550)||(39700887-39701025)
chr8 (184-395)||(16197290-16197502)
chr8 (412-552)||(36359901-36360041)
chr8 (309-550)||(40553128-40553369)
chr8 (225-359)||(44040964-44041099)
chr8 (405-567)||(16197014-16197176)
chr8 (399-548)||(25730102-25730252)
chr8 (405-567)||(29794243-29794405)
chr8 (412-549)||(44041280-44041417)
chr8 (399-546)||(25737588-25737736)
chr8 (433-563)||(45017934-45018062)
chr8 (460-567)||(29792558-29792665)
chr8 (433-567)||(36360088-36360222)
chr8 (442-550)||(43422920-43423028)
chr8 (417-553)||(43423090-43423225)
chr8 (442-567)||(14871369-14871496)
chr8 (412-567)||(45017732-45017887)
chr8 (478-548)||(5358647-5358717)
chr8 (417-563)||(43422847-43422993)
chr8 (491-567)||(13771878-13771954)
chr8 (412-564)||(16208682-16208834)
chr8 (478-545)||(13771425-13771492)
chr8 (309-564)||(40552750-40553014)
chr8 (399-485)||(13771846-13771932)
chr8 (202-280)||(25729898-25729976)
chr8 (412-486)||(35434322-35434396)
chr8 (184-274)||(40553028-40553118)
chr8 (399-567)||(9276467-9276636)
chr8 (417-553)||(39700823-39700960)
chr8 (286-394)||(14871080-14871188)
chr8 (399-546)||(23553847-23553994)
chr8 (473-564)||(36314700-36314791)
chr8 (478-551)||(34686896-34686969)
chr8 (503-567)||(23179033-23179096)
chr8 (431-538)||(14870954-14871060)
chr8 (478-553)||(35433896-35433971)
chr8 (442-567)||(11113536-11113661)
chr8 (313-386)||(14871241-14871314)
chr8 (449-546)||(43423062-43423159)
chr8 (442-550)||(6236251-6236359)
chr8 (417-553)||(40553296-40553432)
chr8 (309-567)||(30576137-30576404)
chr8 (491-553)||(35434341-35434403)
chr8 (442-567)||(9770546-9770671)
chr8 (502-567)||(11113729-11113794)
chr8 (399-486)||(5358649-5358736)
chr8 (491-550)||(25730134-25730193)
chr8 (491-550)||(25737620-25737679)
chr8 (502-553)||(40553261-40553312)
chr8 (490-553)||(44040822-44040884)
chr8 (304-386)||(9276658-9276740)
chr8 (412-486)||(34686890-34686964)
chr8 (417-487)||(41190328-41190398)
chr8 (313-386)||(5358954-5359027)
chr8 (501-550)||(9770674-9770723)
chr8 (309-386)||(16197204-16197281)
chr8 (417-486)||(36314704-36314773)
chr8 (433-549)||(9770624-9770731)
chr8 (309-373)||(25730003-25730067)
chr8 (309-373)||(25737489-25737553)
chr8 (417-485)||(29030175-29030243)
chr8 (309-357)||(44041168-44041216)
chr8 (307-366)||(6236116-6236175)
chr8 (417-492)||(11113551-11113626)
chr8 (286-364)||(23179160-23179238)
chr8 (416-490)||(43422860-43422934)
chr8 (92-125)||(5358718-5358751)
chr8 (200-257)||(5358861-5358918)
chr8 (309-386)||(23553749-23553825)
chr8 (442-563)||(41190293-41190413)
[»] chr6 (42 HSPs)
chr6 (184-567)||(11527790-11528183)
chr6 (184-563)||(17179614-17180002)
chr6 (204-479)||(17131984-17132265)
chr6 (314-563)||(2839937-2840186)
chr6 (195-371)||(9902090-9902267)
chr6 (412-567)||(17180122-17180277)
chr6 (412-567)||(20575398-20575553)
chr6 (417-563)||(32417459-32417605)
chr6 (417-563)||(32423300-32423446)
chr6 (184-395)||(24139157-24139370)
chr6 (442-553)||(2839625-2839736)
chr6 (442-545)||(32417537-32417640)
chr6 (442-545)||(32423378-32423481)
chr6 (442-564)||(9902278-9902400)
chr6 (412-561)||(10862570-10862720)
chr6 (400-566)||(24139479-24139644)
chr6 (442-563)||(11527526-11527647)
chr6 (417-564)||(16168679-16168826)
chr6 (310-405)||(17131679-17131773)
chr6 (184-275)||(10963001-10963089)
chr6 (442-567)||(16168451-16168576)
chr6 (184-364)||(28630318-28630487)
chr6 (459-567)||(20575677-20575783)
chr6 (309-545)||(10962746-10962991)
chr6 (442-550)||(16168644-16168752)
chr6 (490-553)||(9901959-9902022)
chr6 (412-567)||(32417696-32417851)
chr6 (412-567)||(32423537-32423692)
chr6 (492-550)||(20575600-20575658)
chr6 (441-542)||(9946717-9946818)
chr6 (309-373)||(28630497-28630561)
chr6 (493-549)||(32417593-32417649)
chr6 (493-549)||(32423434-32423490)
chr6 (399-486)||(10407316-10407403)
chr6 (309-387)||(9946586-9946664)
chr6 (432-502)||(20575600-20575670)
chr6 (318-373)||(24139388-24139443)
chr6 (309-373)||(17180012-17180076)
chr6 (491-549)||(10407313-10407371)
chr6 (417-482)||(9946753-9946818)
chr6 (417-486)||(11527543-11527612)
chr6 (417-486)||(16168472-16168541)
[»] scaffold0746 (4 HSPs)
scaffold0746 (194-553)||(21-387)
scaffold0746 (399-552)||(505-658)
scaffold0746 (309-373)||(406-470)
scaffold0746 (92-125)||(490-523)
[»] chr2 (53 HSPs)
chr2 (194-564)||(11871506-11871886)
chr2 (184-492)||(20535502-20535821)
chr2 (184-406)||(15506250-15506473)
chr2 (184-564)||(27893023-27893422)
chr2 (307-553)||(27893430-27893685)
chr2 (184-556)||(39301578-39301951)
chr2 (433-550)||(30907136-30907253)
chr2 (431-566)||(30907061-30907195)
chr2 (431-553)||(31263924-31264046)
chr2 (184-351)||(19080891-19081057)
chr2 (423-567)||(30907308-30907453)
chr2 (434-553)||(16781054-16781174)
chr2 (442-550)||(31263987-31264095)
chr2 (412-564)||(34336023-34336175)
chr2 (412-553)||(36196487-36196626)
chr2 (417-553)||(34336262-34336398)
chr2 (450-567)||(37543101-37543218)
chr2 (478-564)||(42117196-42117282)
chr2 (442-549)||(34336227-34336334)
chr2 (184-275)||(36196274-36196365)
chr2 (431-545)||(8260392-8260506)
chr2 (442-552)||(34429681-34429791)
chr2 (442-546)||(32341459-32341564)
chr2 (412-553)||(31264142-31264285)
chr2 (442-553)||(41265258-41265369)
chr2 (442-521)||(20535967-20536046)
chr2 (442-553)||(37542948-37543057)
chr2 (501-567)||(21813191-21813257)
chr2 (309-370)||(36196375-36196436)
chr2 (442-567)||(39376159-39376283)
chr2 (502-550)||(5116907-5116955)
chr2 (412-564)||(19080617-19080769)
chr2 (286-386)||(19080804-19080904)
chr2 (412-486)||(15506052-15506126)
chr2 (509-566)||(13315808-13315865)
chr2 (493-550)||(15506048-15506105)
chr2 (502-563)||(16780928-16780989)
chr2 (433-538)||(39376351-39376456)
chr2 (490-567)||(20535487-20535565)
chr2 (417-487)||(30907079-30907149)
chr2 (309-386)||(20535831-20535908)
chr2 (200-257)||(42117002-42117059)
chr2 (417-485)||(31263932-31264000)
chr2 (501-549)||(34336226-34336274)
chr2 (484-548)||(39301381-39301444)
chr2 (502-545)||(20535967-20536010)
chr2 (452-567)||(32341378-32341493)
chr2 (445-488)||(32341397-32341440)
chr2 (417-488)||(37543128-37543199)
chr2 (506-553)||(41265108-41265155)
chr2 (500-550)||(34429743-34429793)
chr2 (500-545)||(5116963-5117008)
chr2 (476-545)||(19081055-19081124)
[»] chr3 (38 HSPs)
chr3 (184-502)||(31247178-31247505)
chr3 (184-393)||(53783138-53783348)
chr3 (184-394)||(3087207-3087418)
chr3 (405-567)||(31247620-31247782)
chr3 (444-549)||(3087086-3087190)
chr3 (399-553)||(4276135-4276289)
chr3 (303-563)||(35555516-35555788)
chr3 (285-395)||(24707574-24707684)
chr3 (463-564)||(50530235-50530336)
chr3 (184-272)||(4276399-4276486)
chr3 (303-403)||(14629375-14629474)
chr3 (286-373)||(35555831-35555918)
chr3 (412-565)||(21376554-21376707)
chr3 (442-553)||(3088106-3088217)
chr3 (467-566)||(21377037-21377136)
chr3 (309-386)||(14629540-14629617)
chr3 (433-546)||(54456799-54456912)
chr3 (502-567)||(14629271-14629336)
chr3 (491-548)||(31247192-31247248)
chr3 (497-550)||(54456803-54456856)
chr3 (477-548)||(5505728-5505800)
chr3 (421-553)||(54456847-54456979)
chr3 (502-549)||(14964737-14964784)
chr3 (478-549)||(24707471-24707542)
chr3 (417-486)||(3088141-3088210)
chr3 (417-486)||(21377047-21377116)
chr3 (134-182)||(21376755-21376803)
chr3 (502-553)||(35555987-35556038)
chr3 (502-564)||(50530397-50530459)
chr3 (309-386)||(4276311-4276388)
chr3 (442-563)||(4276629-4276741)
chr3 (309-366)||(53783071-53783128)
chr3 (491-564)||(54456660-54456733)
chr3 (92-123)||(4276271-4276302)
chr3 (123-182)||(31247304-31247363)
chr3 (309-395)||(21376891-21376976)
chr3 (506-567)||(18745502-18745563)
chr3 (309-386)||(21376742-21376819)
[»] chr4 (72 HSPs)
chr4 (184-486)||(52567750-52568060)
chr4 (184-553)||(31229254-31229629)
chr4 (208-564)||(30542907-30543254)
chr4 (309-562)||(52181706-52181968)
chr4 (200-564)||(8408340-8408707)
chr4 (412-548)||(26329930-26330066)
chr4 (416-563)||(43098399-43098546)
chr4 (417-567)||(26329995-26330145)
chr4 (194-373)||(52866119-52866298)
chr4 (206-515)||(5387388-5387706)
chr4 (184-275)||(19681451-19681542)
chr4 (457-567)||(19631749-19631859)
chr4 (417-567)||(22025290-22025439)
chr4 (442-550)||(2788928-2789036)
chr4 (417-546)||(2788963-2789092)
chr4 (421-546)||(9320017-9320142)
chr4 (490-565)||(42116069-42116144)
chr4 (412-553)||(8408843-8408984)
chr4 (442-551)||(41735814-41735923)
chr4 (442-563)||(52183437-52183558)
chr4 (436-544)||(35046437-35046545)
chr4 (442-550)||(43098365-43098473)
chr4 (417-563)||(41735743-41735888)
chr4 (442-567)||(52865942-52866067)
chr4 (442-546)||(2909182-2909286)
chr4 (412-548)||(5387131-5387267)
chr4 (449-548)||(2788795-2788894)
chr4 (412-564)||(43098171-43098319)
chr4 (490-564)||(52567732-52567806)
chr4 (446-563)||(23085224-23085340)
chr4 (188-271)||(19632021-19632104)
chr4 (502-549)||(44916324-44916371)
chr4 (501-564)||(52866366-52866429)
chr4 (491-564)||(19632248-19632320)
chr4 (492-563)||(2508252-2508323)
chr4 (286-564)||(19681184-19681464)
chr4 (431-545)||(52568197-52568311)
chr4 (461-546)||(22025274-22025358)
chr4 (497-550)||(26329826-26329879)
chr4 (492-545)||(35046550-35046603)
chr4 (490-550)||(26329948-26330008)
chr4 (432-524)||(35046550-35046642)
chr4 (309-486)||(19632118-19632302)
chr4 (316-395)||(52182046-52182125)
chr4 (483-550)||(52568189-52568256)
chr4 (478-550)||(22025116-22025188)
chr4 (417-485)||(52568243-52568311)
chr4 (478-545)||(2508684-2508751)
chr4 (478-545)||(35023969-35024036)
chr4 (417-486)||(19631770-19631839)
chr4 (405-485)||(2508671-2508751)
chr4 (309-373)||(31229639-31229703)
chr4 (491-531)||(42115654-42115694)
chr4 (309-357)||(52568070-52568118)
chr4 (417-488)||(9320015-9320086)
chr4 (520-567)||(26329762-26329809)
chr4 (497-548)||(35046493-35046544)
chr4 (422-562)||(36890399-36890542)
chr4 (502-545)||(36890540-36890583)
chr4 (497-548)||(36890655-36890706)
chr4 (405-486)||(2508269-2508348)
chr4 (348-402)||(19631918-19631972)
chr4 (433-511)||(26329805-26329883)
chr4 (412-486)||(36890630-36890704)
chr4 (442-488)||(52866367-52866413)
chr4 (417-486)||(2788797-2788866)
chr4 (501-546)||(2909242-2909287)
chr4 (285-386)||(30542796-30542897)
chr4 (510-567)||(41735958-41736015)
chr4 (420-473)||(42115652-42115705)
chr4 (412-485)||(42116051-42116124)
chr4 (417-486)||(52183472-52183541)
[»] scaffold0070 (2 HSPs)
scaffold0070 (194-403)||(28816-29024)
scaffold0070 (399-552)||(28545-28698)
[»] chr1 (56 HSPs)
chr1 (184-519)||(8902795-8903140)
chr1 (184-395)||(34254761-34254971)
chr1 (303-563)||(27351041-27351313)
chr1 (265-524)||(49650844-49651096)
chr1 (184-395)||(10686363-10686575)
chr1 (200-373)||(29418806-29418980)
chr1 (431-567)||(34254485-34254621)
chr1 (417-567)||(44964062-44964211)
chr1 (348-566)||(48352652-48352879)
chr1 (412-553)||(10686697-10686838)
chr1 (433-545)||(44964018-44964130)
chr1 (417-564)||(17898836-17898983)
chr1 (195-387)||(4772268-4772460)
chr1 (450-564)||(11897831-11897945)
chr1 (452-567)||(39302711-39302826)
chr1 (411-553)||(29419027-29419173)
chr1 (417-545)||(1765916-1766044)
chr1 (184-284)||(37663309-37663408)
chr1 (442-553)||(10685848-10685959)
chr1 (435-550)||(17898794-17898909)
chr1 (184-257)||(27351332-27351405)
chr1 (446-545)||(35701450-35701548)
chr1 (184-275)||(48352466-48352557)
chr1 (399-485)||(8903249-8903335)
chr1 (452-562)||(49650564-49650674)
chr1 (215-403)||(4030401-4030590)
chr1 (478-545)||(8902829-8902896)
chr1 (478-543)||(1765763-1765828)
chr1 (442-545)||(1765881-1765984)
chr1 (491-564)||(2965480-2965553)
chr1 (502-563)||(4772161-4772222)
chr1 (478-567)||(8903268-8903357)
chr1 (502-550)||(4772650-4772698)
chr1 (307-395)||(27351413-27351501)
chr1 (442-553)||(27351548-27351659)
chr1 (416-486)||(39302735-39302805)
chr1 (479-548)||(34254564-34254633)
chr1 (497-550)||(44964022-44964075)
chr1 (417-486)||(49650580-49650649)
chr1 (467-546)||(4030310-4030390)
chr1 (502-545)||(49651014-49651057)
chr1 (491-549)||(44963903-44963961)
chr1 (412-485)||(2965499-2965572)
chr1 (417-486)||(10685855-10685924)
chr1 (430-535)||(35701400-35701504)
chr1 (478-567)||(39302317-39302406)
chr1 (288-373)||(49650754-49650839)
chr1 (434-486)||(4030310-4030362)
chr1 (309-369)||(8903150-8903210)
chr1 (417-485)||(11897850-11897918)
chr1 (309-373)||(39302454-39302518)
chr1 (309-359)||(34254701-34254751)
chr1 (309-386)||(4772517-4772594)
chr1 (148-185)||(27351257-27351294)
chr1 (417-486)||(34254506-34254575)
chr1 (320-373)||(48352389-48352442)
[»] scaffold0027 (4 HSPs)
scaffold0027 (184-395)||(9648-9859)
scaffold0027 (452-565)||(9896-10009)
scaffold0027 (442-564)||(9383-9505)
scaffold0027 (417-486)||(9921-9990)
[»] scaffold0019 (3 HSPs)
scaffold0019 (433-564)||(124132-124262)
scaffold0019 (417-567)||(124345-124495)
scaffold0019 (460-550)||(124328-124418)
[»] scaffold0041 (3 HSPs)
scaffold0041 (431-553)||(45205-45327)
scaffold0041 (463-550)||(45177-45264)
scaffold0041 (417-486)||(45251-45320)
[»] scaffold0374 (4 HSPs)
scaffold0374 (490-553)||(16173-16236)
scaffold0374 (498-567)||(16059-16128)
scaffold0374 (412-487)||(16590-16665)
scaffold0374 (491-546)||(16609-16664)


Alignment Details
Target: chr5 (Bit Score: 489; Significance: 0; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 489; E-Value: 0
Query Start/End: Original strand, 92 - 713
Target Start/End: Complemental strand, 1722963 - 1722340
Alignment:
Q  92 gataaactatttcactgttacccctgctgtcaattgatgctcatgtagccactacgttgttgacttgaattaaaatgttgtcttttaaaagataatggtc 191  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||  | ||||||||||||||| |||||| |  |||||||||| ||||||||    
T  1722963 gataaactatttcactgttacccctgctgtcaaatgatgctcatgtagccatcaagttgttgacttgaatcaaaatgctcccttttaaaaggtaatggtc 1722864  T
Q  192 ataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactgatatttgt 291  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  1722863 ataaatgatcatttataatgctagaaagacaactatttacaacaacaaatgtctttctagcactattaaacgacatttatagtgataaaatgatatttgt 1722764  T
Q  292 gttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaattatt 391  Q
    | |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  1722763 gatcattgaatgtaacattttgacaccctgaagcttttaaaaggcagcgttttgatccaagtcaacaatttaacggctacattaacatcaattaattatt 1722664  T
Q  392 aactcacaacagaga--aatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaat 489  Q
    |||||||||||||||  ||| ||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1722663 aactcacaacagagagaaataatttataaactaaaatgacatatttgaaacttttgaaacttaaaggattaacttgagaattatgtcaaactaaaagaat 1722564  T
Q  490 ctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggccccgcataaataataaatatgtt 589  Q
    ||||||||||||||||||| ||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1722563 ctatttaaaacttttgaaaattaaaggactaacttgtgaattttgttaaactaaaaggaccaaacatggtatttggccccgcataaataataaatatgtt 1722464  T
Q  590 tgcaacgacacttaagaagtgaacgacgttaaccaccgttgaagatacatggtagttttagagtgtcttagagcaattttagaagtctaaaaggaatttt 689  Q
    ||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1722463 tgcaacgacacttaagaagcgaacgacgttaaccggcgttgaagatacatggtagttttagagtgtcttagagcaattttagaagtctaaaaggaatttt 1722364  T
Q  690 caaacagtgatgatgtccatctca 713  Q
    |||||||| ||| ||| |||||||    
T  1722363 caaacagttatgttgtacatctca 1722340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 184 - 563
Target Start/End: Original strand, 20728790 - 20729169
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactg 283  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||| || | ||    
T  20728790 taatggtcacaaatgatcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcaatattacacaacatttatagtgctagaatg 20728889  T
Q  284 at-atttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaa 382  Q
    || |||||||   ||| ||  |||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||| |  || |     
T  20728890 atcatttgtgacaattaaacttaacgttttgacaccctggagcttttaaaatgcagcgttttgatcaaagtcaacaacttaacagctacatcagcat-ag 20728988  T
Q  383 ttaattattaactcacaaca---------gagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattat 473  Q
    |||||||||| || |||| |         | |||||  ||||| |||||||| ||| |||||||||| ||| |||||||||||| |||||||| |||| |    
T  20728989 ttaattattatctgacaaaatgggtaatggtgaaatagtttatcaactaaaaggacctatttgaaacttttaaaatttaaaggactaacttgaaaattct 20729088  T
Q  474 gtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtattt 563  Q
    ||||||||||||| |||||||||         ||| ||||||||||||||||| |||||| |||||||||||||||||||| || |||||    
T  20729089 gtcaaactaaaaggatctattta---------aaatttaaaggactaacttgataattttatcaaactaaaaggaccaaacgtgatattt 20729169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 184 - 567
Target Start/End: Original strand, 36418143 - 36418538
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactg 283  Q
    ||||||||| ||||| |||||||||||||||  |||||| ||||||||||||| |||||||||||||||||||||| |||||||||||| |  || | ||    
T  36418143 taatggtcacaaatgatcatttatagtgctaataagacagctatttacaacaataaatgtctttctagcactattaaacgacatttataatactagaatg 36418242  T
Q  284 at-atttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaa 382  Q
    || |||||||   ||| || ||||  ||||||| | | |||||||||||||  || ||||||||| ||||||||||| ||||||||||||| |  ||||     
T  36418243 atcatttgtgacgattaaacgtaatgttttgactcaccggagcttttaaaagacaacgttttgattcaagtcaacaacttaacggctacatcagcatcag 36418342  T
Q  383 ttaattattaactcaca-----------acagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaatt 471  Q
     |||||||||||| |||           || | |||||  ||||| |||||||| ||| |||||||||| ||||||| |||||||| |||||||| ||||    
T  36418343 ctaattattaactgacatgaggggggtaacggtgaaatagtttatcaactaaaaggacctatttgaaacttttgaaacttaaaggactaacttgaaaatt 36418442  T
Q  472 atgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    ||||||||||||||| | ||| || ||||||||||||| |||||||||||||||| |||| ||||||||||||| |||||||| |  |||||||||    
T  36418443 atgtcaaactaaaaggacctaattgaaacttttgaaacgtaaaggactaacttgagaattatgtcaaactaaaaagaccaaacgtcatatttggcc 36418538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 201 - 567
Target Start/End: Original strand, 13543366 - 13543740
Alignment:
Q  201 catttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactgatatttgtgttcattga 300  Q
    ||||||||||||||||||| || |||||||||||||||||||||| | | ||||||||| ||||||||||||||| || | |||||||| ||  |||| |    
T  13543366 catttatagtgctagaaaggcagctatttacaacaacaaatgtctctat-gcactattaaacgacatttatagtgctagaatgatatttttgaccattaa 13543464  T
Q  301 atgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaattattaactcac-- 398  Q
    | ||||  |||||| ||| || |||||||||||  || | ||||||||||||||||||| ||||||| ||||| || |||||||||||||||||| ||      
T  13543465 acgtaatgttttgataccttgaagcttttaaaagacaacattttgatccaagtcaacaacttaacggttacatcaacatcaattaattattaactgacag 13543564  T
Q  399 -------aacagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatct 491  Q
           ||||| |||||  ||||| || |||||  || |||||||||| ||||||||||||||||||||||| |||||| |  ||||||||||| ||||    
T  13543565 cataggtaacagtgaaatagtttatcaagtaaaagaacctatttgaaacttttgaaatttaaaggattaacttaagaattcttccaaactaaaaggatct 13543664  T
Q  492 atttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
     || ||||||||||||| |||||  ||||| |||| |||| ||||||||||||| ||  |||  ||||||||||||    
T  13543665 gttaaaaacttttgaaatttaaaaaactaatttgagaattctgtcaaactaaaaagagtaaaagtggtatttggcc 13543740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 194 - 568
Target Start/End: Complemental strand, 5734833 - 5734448
Alignment:
Q  194 aaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactgat-atttgtg 292  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||| || || | |||| |||||||    
T  5734833 aaatgatcatttatagtgctagaaagacaactatttacgacaacaaatgcctttctagcactattaaacgacatttatattgctagaatgatcatttgtg 5734734  T
Q  293 ttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacat---taatatcaattaatta 389  Q
       ||| || ||||| |||||||||| |||||||||| |||  || |||||||||| ||||||| || |||||||||||||    | ||| | |||||||    
T  5734733 acgattaaacgtaacgttttgacaccttggagctttt-aaagacaacgttttgatcaaagtcaaaaacttaacggctacatcagcattattagttaatta 5734635  T
Q  390 ttaactcac---------aacagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaac 480  Q
    |||||| ||         ||| | |||||  ||||| ||||||||||||||||||||||| ||| ||| |||||||| ||||||  ||||| |||||||     
T  5734634 ttaactgacagcaggggtaacggtgaaatagtttattaactaaaatgacttatttgaaacttttaaaacttaaagga-taacttaggaattctgtcaaat 5734536  T
Q  481 taaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggccc 568  Q
    |||||  |  || || |||||||  |||||||||| | |||||| ||||||  |||||| ||||||||||||||||| ||||||||||    
T  5734535 taaaatgacataattgaaactttcaaaacttaaagaagtaacttaaaaattcagtcaaattaaaaggaccaaacatgatatttggccc 5734448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 194 - 395
Target Start/End: Original strand, 19278977 - 19279179
Alignment:
Q  194 aaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactgat-atttgtg 292  Q
    ||||| |||||||||||||||||||  ||||||||||||||||||| || |||||||||||||||| ||||||||||||||| || | |||| |||| ||    
T  19278977 aaatgatcatttatagtgctagaaatgcaactatttacaacaacaattgcctttctagcactattaaacgacatttatagtgctagagtgatcatttatg 19279076  T
Q  293 ttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaattatta 392  Q
      |||| |||||||  |||||||||||||||| |||||||||||| ||||||||||||||| ||||| |||||  |||||| || |||||||||||||||    
T  19279077 accattaaatgtaatgttttgacaccctggagattttaaaatgcaacgttttgatccaagttaacaacttaacaactacatcaacatcaattaattatta 19279176  T
Q  393 act 395  Q
    |||    
T  19279177 act 19279179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 184 - 563
Target Start/End: Original strand, 35190167 - 35190546
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactg 283  Q
    ||||||||| ||||| ||||||| ||| ||| |||||||||||||||||||||||||| | |||| |||||||||| ||||||||||||||| || | ||    
T  35190167 taatggtcacaaatgatcatttaaagttctataaagacaactatttacaacaacaaatatgtttcaagcactattaaacgacatttatagtggtagaatg 35190266  T
Q  284 at-atttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaa 382  Q
    || ||||| |   ||| || ||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||| ||||| |||| || |  ||||     
T  35190267 atcatttgcgacgattaaacgtaacattttgacaccctgaagcttttaaaaggcagcattttgatcaaagtcaacaaattaaccgctaaatcagcatcag 35190366  T
Q  383 ttaattattaactcacaaca---------gagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattat 473  Q
    ||||||||||||| ||||||         | |||||  ||||| |||||||| |||          |  |||||| ||||| ||  || ||||||||| |    
T  35190367 ttaattattaactgacaacaagggtaacggtgaaatagtttatcaactaaaaagac----------caattgaaacttaaaagacaaatttgagaatttt 35190456  T
Q  474 gtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtattt 563  Q
    ||||||||||||| | ||| || |||||||  |||||||||| | ||||||||||||| ||||||| |||||||||||||| || |||||    
T  35190457 gtcaaactaaaaggacctaattgaaactttcaaaacttaaagaagtaacttgaaaattctgtcaaattaaaaggaccaaacgtgatattt 35190546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 184 - 563
Target Start/End: Complemental strand, 26275869 - 26275494
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactg 283  Q
    ||||||||| ||||| || |||||||| ||||||||  | ||||||||||| |||||| ||||||||||||||||  ||| ||||||||||| || | ||    
T  26275869 taatggtcacaaatgatcctttatagttctagaaaggaagctatttacaacgacaaatttctttctagcactattgaacgtcatttatagtgctagaatg 26275770  T
Q  284 at-atttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaa 382  Q
    || |||||||  || |||| ||||| |||||||| ||| |||||||||||| ||| | |||||||| |||| ||||| |||||| |||||| |  |||||    
T  26275769 atcatttgtgaccactgaacgtaactttttgacatcctagagcttttaaaaggcatcattttgatctaagttaacaacttaacgactacatgagcatcaa 26275670  T
Q  383 ttaattattaactcac----aacagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaa 478  Q
    ||| ||||||||| ||    ||||  |||||  ||| | ||||||||  || ||||||||||         || || || ||||||| |||||  |||||    
T  26275669 ttagttattaactgacaggtaacaatgaaatagtttgtcaactaaaagaacctatttgaaac---------ttgaatgactaacttgggaattccgtcaa 26275579  T
Q  479 actaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtattt 563  Q
    |||||||  |||||||| ||||||||||||||||||| ||||||||  ||||| |||||||||||||| ||||||| || |||||    
T  26275578 actaaaatgatctatttgaaacttttgaaacttaaagaactaacttagaaattctgtcaaactaaaagtaccaaacgtgatattt 26275494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 417 - 567
Target Start/End: Complemental strand, 18951439 - 18951289
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaagg 516  Q
    ||||||||||||| ||||| |||| ||| ||| |||||||| ||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||    
T  18951439 aaactaaaatgacctatttaaaacttttaaaacttaaaggactaacttgagaattctatcaaactaaaaggatctatttaaaacttttgaaacttaaagg 18951340  T
Q  517 actaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    |||||||||  |||| |||||||||||||||||||||  || |||||||||    
T  18951339 actaacttgggaattctgtcaaactaaaaggaccaaatgtgttatttggcc 18951289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 200 - 545
Target Start/End: Complemental strand, 30738102 - 30737748
Alignment:
Q  200 tcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactgat-atttgtgttcatt 298  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||| || |||||||||||| || | |||| |||||||   |||    
T  30738102 tcatttatagtgctagaaagacaactatttacaacaacaaa-gtctttttggcactattaaacaacatttatagtgttagaatgatcatttgtgacgatt 30738004  T
Q  299 gaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaattattaactca- 397  Q
     || |||||||||||||||| ||| ||||||||||  |||  ||||||||||||||||||| |||||| |||||| |  || | ||||||| ||||| |     
T  30738003 aaacgtaacattttgacaccttggggcttttaaaaaacagtattttgatccaagtcaacaacttaacgactacatcagcataagttaattactaactgat 30737904  T
Q  398 --------caacagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaat 489  Q
             ||| |  |||   ||||| |||| ||||||||||||| |||| ||||||| ||||| || ||| |||||||||||||||||||||||  |     
T  30737903 agtaggggtaacggtaaaacagtttatcaacttaaatgacttatttaaaacttttgaaacttaaaagactaatttgagaattatgtcaaactaaaaagac 30737804  T
Q  490 ctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaa 545  Q
     || || ||||||| |||| ||||| || |||||||| |||| ||||||| |||||    
T  30737803 gtaattgaaactttcgaaatttaaatgattaacttgagaattctgtcaaattaaaa 30737748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 300 - 564
Target Start/End: Complemental strand, 18249220 - 18248947
Alignment:
Q  300 aatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaattattaactcaca 399  Q
    |||||||| |||||||||||| |||||||||||||||||| ||||||||||| ||||||| | ||||||||||| | ||| | ||||||||||| | |||    
T  18249220 aatgtaacgttttgacaccctagagcttttaaaatgcagcattttgatccaaatcaacaactcaacggctacatcagtattagttaattattaattgaca 18249121  T
Q  400 acagag---------aaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatc 490  Q
     ||| |         ||||  ||||| |||||||| ||| ||||| |||| ||||||| ||||| || ||||||||||||| ||| |||||||||| |      
T  18249120 gcaggggtaacgatgaaatagtttatcaactaaaaagacctatttaaaacttttgaaacttaaatgactaacttgagaattctgttaaactaaaaggaca 18249021  T
Q  491 tatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttg 564  Q
    || ||||||||||  |||| |||| || |||||| |||||| | |||||||||||||||||||  |||||||||    
T  18249020 tagttaaaactttcaaaacgtaaaagattaacttaaaaattctatcaaactaaaaggaccaaaagtggtatttg 18248947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 433 - 563
Target Start/End: Complemental strand, 6336263 - 6336133
Alignment:
Q  433 tttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattt 532  Q
    |||||||| ||||||| |||||||| |||||||  |||| | |||||||||||  | |||||||||||||||||||||||||||||||||||| |||||     
T  6336263 tttgaaacttttgaaacttaaaggactaacttggaaattctttcaaactaaaatgacctatttaaaacttttgaaacttaaaggactaacttggaaattc 6336164  T
Q  533 tgtcaaactaaaaggaccaaacatggtattt 563  Q
    || ||||||||||||||| || |||||||||    
T  6336163 tgccaaactaaaaggaccgaaaatggtattt 6336133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 418 - 564
Target Start/End: Complemental strand, 20728663 - 20728517
Alignment:
Q  418 aactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaagga 517  Q
    |||||||| ||| |||||||||| ||| ||| |||||||| ||||||||||||| ||| |||||||||| | ||| || || |||| |||||||||||||    
T  20728663 aactaaaaagacatatttgaaacttttaaaacttaaaggactaacttgagaattctgttaaactaaaaggacctaattgaatctttcgaaacttaaagga 20728564  T
Q  518 ctaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttg 564  Q
    |||||||| ||||| ||||||||||||| |||||||  |||||||||    
T  20728563 ctaacttggaaattctgtcaaactaaaaagaccaaaagtggtatttg 20728517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 184 - 400
Target Start/End: Complemental strand, 38405416 - 38405198
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactg 283  Q
    |||||| || ||||| ||||||||| ||||||||||| | | ||||| | |||||||||||||||||||| ||||| |||| |||||||||| |    ||    
T  38405416 taatgggcacaaatgatcatttataatgctagaaagatagccatttatagcaacaaatgtctttctagcattattaaacgatatttatagtgctgggatg 38405317  T
Q  284 at-atttgtgttcattgaatgtaacattttgacaccctggagctttt-aaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatca 381  Q
    || |||||||  ||||  | |||| ||||||||||| || ||||||| ||||||||||||||||||||||||||| || |||| | |||||| || ||||    
T  38405316 atcatttgtgaccattacacgtaatattttgacaccttgaagctttttaaaatgcagcgttttgatccaagtcaataacttaaagactacatcaacatca 38405217  T
Q  382 attaattattaactcacaa 400  Q
     ||||||||||||| ||||    
T  38405216 gttaattattaactgacaa 38405198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 417 - 553
Target Start/End: Complemental strand, 32660335 - 32660199
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaagg 516  Q
    ||||||||||||| |||||||||| ||||||| |||||||| ||||||||||||| ||| ||||||||||||  || || ||||||| ||||||||||||    
T  32660335 aaactaaaatgacctatttgaaacttttgaaacttaaaggactaacttgagaattttgtaaaactaaaagaacataattgaaactttcgaaacttaaagg 32660236  T
Q  517 actaacttgaaaattttgtcaaactaaaaggaccaaa 553  Q
    | ||||||  ||||| ||| ||||||||| |||||||    
T  32660235 attaacttagaaattatgtaaaactaaaaagaccaaa 32660199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 452 - 567
Target Start/End: Complemental strand, 14235669 - 14235554
Alignment:
Q  452 aaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggacca 551  Q
    |||||| ||||||||||||| |||||||||||||| | ||| |||||||||||  |||||||||||||||||| |||||| | |||||||||||||||||    
T  14235669 aaaggactaacttgagaattctgtcaaactaaaaggacctaattaaaacttttagaacttaaaggactaacttaaaaattatttcaaactaaaaggacca 14235570  T
Q  552 aacatggtatttggcc 567  Q
    || ||| |||||||||    
T  14235569 aaaatgatatttggcc 14235554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 184 - 369
Target Start/End: Complemental strand, 18321083 - 18320898
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactg 283  Q
    ||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||  |||||| |||| || | ||    
T  18321083 taatggtcacaaatgatcatttatagtgctacaaagacaactatttacaacaacaaatgtctttctagcattattaaacagcatttaaagtgctagaatg 18320984  T
Q  284 at-atttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggct 369  Q
    || |||| ||   ||| ||| |||| |||||||| |||  | ||||| ||| | ||| ||||||||||||||||||| |||||||||    
T  18320983 atcatttttgacgattaaatataacgttttgacatcctaaaactttt-aaagggagcattttgatccaagtcaacaacttaacggct 18320898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 399 - 553
Target Start/End: Complemental strand, 19278858 - 19278705
Alignment:
Q  399 aacagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaa 498  Q
    ||||| |||||  ||||| ||||||||||| ||||||||||   |||||| ||||||   ||||||||||||| |||||||||||||||| ||| |||||    
T  19278858 aacagtgaaatagtttatcaactaaaatgatttatttgaaattattgaaacttaaagaggtaacttgagaattctgtcaaactaaaagaagctaattaaa 19278759  T
Q  499 acttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaa 553  Q
    | |||||||| ||||||||||||||| | |||| |||||||||||||||| ||||    
T  19278758 a-ttttgaaatttaaaggactaacttaagaattctgtcaaactaaaaggatcaaa 19278705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 433 - 546
Target Start/End: Complemental strand, 32660379 - 32660266
Alignment:
Q  433 tttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattt 532  Q
    |||||||| ||||||| |||||||| ||||||  ||||| |||||||||||||  | |||||| |||||||||||||||||||||||||||||| |||||    
T  32660379 tttgaaacttttgaaacttaaaggactaacttaggaattctgtcaaactaaaatgacctatttgaaacttttgaaacttaaaggactaacttgagaattt 32660280  T
Q  533 tgtcaaactaaaag 546  Q
    ||| ||||||||||    
T  32660279 tgtaaaactaaaag 32660266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 442 - 553
Target Start/End: Complemental strand, 36417997 - 36417886
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaact 541  Q
    ||||||| |||||||| |||||||||||||||||||||| ||||||| ||| || ||||||| |||| ||||||||||||||||| |||| ||| |||||    
T  36417997 tttgaaacttaaaggactaacttgagaattatgtcaaaccaaaagaacctaattgaaactttcgaaatttaaaggactaacttgagaattctgttaaact 36417898  T
Q  542 aaaaggaccaaa 553  Q
    ||||||| ||||    
T  36417897 aaaaggatcaaa 36417886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 412 - 551
Target Start/End: Original strand, 5734964 - 5735102
Alignment:
Q  412 tttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaactt 511  Q
    ||||| |||||||||||| |||||||||| |||||| || |||||| ||||||||||||| ||| |||||||||| |  || |||||| ||| |||| ||    
T  5734964 tttatcaactaaaatgacctatttgaaacttttgaactt-aaaggactaacttgagaattctgttaaactaaaaggacataattaaaattttcgaaattt 5735062  T
Q  512 aaaggactaacttgaaaattttgtcaaactaaaaggacca 551  Q
    ||| ||||||||||| ||||   |||||||||||||||||    
T  5735063 aaatgactaacttgagaattcgatcaaactaaaaggacca 5735102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 490 - 553
Target Start/End: Complemental strand, 32459490 - 32459427
Alignment:
Q  490 ctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaa 553  Q
    ||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||    
T  32459490 ctatttaaaacttttgaaacttaaatgactaacttgtgaattttgtcaaactaaaaggaccaaa 32459427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 418 - 548
Target Start/End: Original strand, 30738248 - 30738377
Alignment:
Q  418 aactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaagga 517  Q
    |||||||||||| |||||||||| |||||||  |||||||  |||||||||||| ||||||| |||||  | ||| |||||| ||| ||||||||||  |    
T  30738248 aactaaaatgacatatttgaaacttttgaaacataaaggacaaacttgagaattctgtcaaattaaaatgacctaattaaaa-tttcgaaacttaaaata 30738346  T
Q  518 ctaacttgaaaattttgtcaaactaaaagga 548  Q
    |||||||  ||||| ||||||||||||||||    
T  30738347 ctaacttcgaaattctgtcaaactaaaagga 30738377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 491 - 553
Target Start/End: Original strand, 35891263 - 35891325
Alignment:
Q  491 tatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaa 553  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  35891263 tatttgaaacttttgaaacttaaaggactaacttgaaaattatgtcaaactaaaaggatcaaa 35891325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 502 - 567
Target Start/End: Original strand, 26276012 - 26276077
Alignment:
Q  502 tttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||  ||||||||||||    
T  26276012 tttgaaacttaaaggactaacttggaaattttgtcaaactaaaaggatcaaaagtggtatttggcc 26276077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 423 - 564
Target Start/End: Original strand, 31813886 - 31814017
Alignment:
Q  423 aaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaac 522  Q
    |||||||||||||||||| ||||||||| ||| ||   ||||||||||| ||||||||||||| | |||||||         |||||||||| |||||||    
T  31813886 aaatgacttatttgaaacttttgaaattaaaatgacatacttgagaattctgtcaaactaaaa-agtctattt---------gaaacttaaatgactaac 31813975  T
Q  523 ttgaaaattttgtcaaactaaaaggaccaaacatggtatttg 564  Q
    |||  |||| |||||||||||||||||||||| |||||||||    
T  31813976 ttgggaattctgtcaaactaaaaggaccaaacgtggtatttg 31814017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 313 - 545
Target Start/End: Complemental strand, 35190153 - 35189922
Alignment:
Q  313 gacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaattattaactcac---------aacag 403  Q
    |||||||| |||||||| ||| ||| | ||||||||||||||||||| |||||| |||||| || |||| ||||||||||||| ||         |||||    
T  35190153 gacaccctagagcttttgaaaggcaacattttgatccaagtcaacaacttaacgactacatcaacatcagttaattattaactgacaacaggggtaacag 35190054  T
Q  404 agaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttt 503  Q
     |||||  ||||| |||||||||||  | ||||||||         |||||||| ||||||| || || |||||||||||||  | ||||||||||||||    
T  35190053 tgaaatagtttatcaactaaaatgatctttttgaaac---------ttaaaggactaacttgggagttctgtcaaactaaaatgacctatttaaaacttt 35189963  T
Q  504 tgaaacttaaaggactaacttgaaaattttgtcaaactaaaa 545  Q
     |||||||||| ||||||||||| |||| | ||||| |||||    
T  35189962 cgaaacttaaa-gactaacttgagaattctatcaaattaaaa 35189922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 464 - 548
Target Start/End: Complemental strand, 18951452 - 18951368
Alignment:
Q  464 tgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaagga 548  Q
    |||||||| | |||||||||||  | ||||||||||||||| ||||||||||||||||||||| |||| | ||||||||||||||    
T  18951452 tgagaattctatcaaactaaaatgacctatttaaaacttttaaaacttaaaggactaacttgagaattctatcaaactaaaagga 18951368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 405 - 567
Target Start/End: Complemental strand, 13543235 - 13543070
Alignment:
Q  405 gaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaa---cttgagaattatgtcaaactaaaagaatctatttaaaact 501  Q
    ||||| |||||| |||||||||||| |||||||||| ||||||| |||||||| |||   ||||  ||||   |||||||||||  | ||| || |||||    
T  13543235 gaaataatttatcaactaaaatgacatatttgaaacttttgaaacttaaaggactaataacttggaaattccatcaaactaaaaagacctaattgaaact 13543136  T
Q  502 tttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    || ||||||||||| | ||||||   |||| |||||||||||||||||||||  |||| |||||||    
T  13543135 ttcgaaacttaaagaattaacttaggaattatgtcaaactaaaaggaccaaaagtggtctttggcc 13543070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 412 - 514
Target Start/End: Original strand, 6336310 - 6336412
Alignment:
Q  412 tttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaactt 511  Q
    ||||| |||| ||| ||| |||||||||| |||||||||||||||| ||||||  ||||| || |||| |||||||||||| || ||||||| |||||||    
T  6336310 tttatcaactgaaaggacatatttgaaacatttgaaatttaaaggactaacttaggaattctgacaaattaaaagaatctaattgaaactttcgaaactt 6336409  T
Q  512 aaa 514  Q
    |||    
T  6336410 aaa 6336412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 490 - 541
Target Start/End: Original strand, 18238339 - 18238390
Alignment:
Q  490 ctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaact 541  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  18238339 ctatttaaaacttttgaaacttaaacgactaacttggaaattttgtcaaact 18238390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 428 - 486
Target Start/End: Original strand, 35891260 - 35891318
Alignment:
Q  428 acttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaag 486  Q
    ||||||||||||| ||||||| |||||||| |||||||| |||||||||||||||||||    
T  35891260 acttatttgaaacttttgaaacttaaaggactaacttgaaaattatgtcaaactaaaag 35891318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 478 - 546
Target Start/End: Complemental strand, 18237987 - 18237919
Alignment:
Q  478 aactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaag 546  Q
    ||||||||| |  |||||||||||||| |||||||||||| |||||| |||||| ||||||||||||||    
T  18237987 aactaaaaggacttatttaaaacttttaaaacttaaaggattaacttaaaaattctgtcaaactaaaag 18237919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 399 - 486
Target Start/End: Complemental strand, 18238006 - 18237919
Alignment:
Q  399 aacagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaag 486  Q
    ||||| |||||  ||||| |||||||| ||||||||| |||| ||| ||| ||||||||||||||| | |||| ||||||||||||||    
T  18238006 aacagtgaaatattttatcaactaaaaggacttatttaaaacttttaaaacttaaaggattaacttaaaaattctgtcaaactaaaag 18237919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 399 - 486
Target Start/End: Complemental strand, 32459521 - 32459434
Alignment:
Q  399 aacagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaag 486  Q
    ||||| |||||  ||||| |||||||||||| ||||| |||| ||||||| ||||| || ||||||| ||||| ||||||||||||||    
T  32459521 aacagtgaaatagtttatcaactaaaatgacctatttaaaacttttgaaacttaaatgactaacttgtgaattttgtcaaactaaaag 32459434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 309 - 386
Target Start/End: Complemental strand, 38082800 - 38082723
Alignment:
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaa 386  Q
    ||||||||||||| ||| ||||||||| ||||||||||||||||| || |||||||| || |||| || |||| ||||    
T  38082800 ttttgacaccctgaagcctttaaaatgaagcgttttgatccaagtgaataatttaacagccacatcaacatcagttaa 38082723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 459 - 567
Target Start/End: Complemental strand, 13538563 - 13538455
Alignment:
Q  459 taacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatgg 558  Q
    |||||||| |||| | ||||||||||   | ||| || ||||||| ||||| ||||||||||||||   |||| |||||||||||||||||||||  |||    
T  13538563 taacttgaaaattctatcaaactaaacagacctaattgaaactttcgaaacgtaaaggactaacttaggaattatgtcaaactaaaaggaccaaaagtgg 13538464  T
Q  559 tatttggcc 567  Q
    | |||||||    
T  13538463 tctttggcc 13538455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 497 - 548
Target Start/End: Original strand, 19279239 - 19279290
Alignment:
Q  497 aaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaagga 548  Q
    ||||||||||||||||||  |||||||| | |||||||||||||||||||||    
T  19279239 aaacttttgaaacttaaaaaactaacttaagaattttgtcaaactaaaagga 19279290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 478 - 548
Target Start/End: Original strand, 1722964 - 1723034
Alignment:
Q  478 aactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaagga 548  Q
    ||||||||  || |||||||||||||| |||||||||  ||||||||  ||||||||| ||||||||||||    
T  1722964 aactaaaatgatatatttaaaacttttaaaacttaaaacactaacttagaaattttgttaaactaaaagga 1723034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 309 - 359
Target Start/End: Complemental strand, 13543339 - 13543289
Alignment:
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaa 359  Q
    ||||||||||||| | ||||||||| ||| |||||||||||||||||||||    
T  13543339 ttttgacaccctgaaacttttaaaaggcaacgttttgatccaagtcaacaa 13543289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 309 - 355
Target Start/End: Complemental strand, 20728780 - 20728734
Alignment:
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtca 355  Q
    ||||||||| |||||||||||||||  ||||||||||||||||||||    
T  20728780 ttttgacactctggagcttttaaaagacagcgttttgatccaagtca 20728734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 417 - 486
Target Start/End: Complemental strand, 6336219 - 6336150
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaag 486  Q
    ||||||||||||| ||||| |||| ||||||| |||||||| |||||||  |||| || |||||||||||    
T  6336219 aaactaaaatgacctatttaaaacttttgaaacttaaaggactaacttggaaattctgccaaactaaaag 6336150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 309 - 366
Target Start/End: Complemental strand, 19278957 - 19278900
Alignment:
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacg 366  Q
    |||||||| |||||| |||||||||  || ||||||||||||||||||||| ||||||    
T  19278957 ttttgacatcctggaacttttaaaagacaacgttttgatccaagtcaacaacttaacg 19278900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 497 - 550
Target Start/End: Complemental strand, 32660375 - 32660322
Alignment:
Q  497 aaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggacc 550  Q
    ||||||||||||||||||||||||||||   |||| ||||||||||||| ||||    
T  32660375 aaacttttgaaacttaaaggactaacttaggaattctgtcaaactaaaatgacc 32660322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 463 - 564
Target Start/End: Original strand, 38405569 - 38405670
Alignment:
Q  463 ttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatt 562  Q
    ||||||||| || ||||||||||  |  || || ||||||| |||||||||| || |||||||  |||| ||| |||||||||||| |||| ||||||||    
T  38405569 ttgagaattctgccaaactaaaatgacataattgaaactttcgaaacttaaatgattaacttgggaattctgtgaaactaaaaggatcaaaaatggtatt 38405668  T
Q  563 tg 564  Q
    ||    
T  38405669 tg 38405670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 417 - 486
Target Start/End: Original strand, 38405583 - 38405652
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaag 486  Q
    ||||||||||||| || ||||||| || |||| ||||| |||||||||| ||||| ||| ||||||||||    
T  38405583 aaactaaaatgacataattgaaactttcgaaacttaaatgattaacttgggaattctgtgaaactaaaag 38405652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 405 - 481
Target Start/End: Original strand, 18238314 - 18238390
Alignment:
Q  405 gaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaact 481  Q
    ||||| |||||| |||||||||||| ||||| |||| ||||||| ||||| || |||||||  |||| |||||||||    
T  18238314 gaaataatttatcaactaaaatgacctatttaaaacttttgaaacttaaacgactaacttggaaattttgtcaaact 18238390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 434 - 486
Target Start/End: Complemental strand, 36417945 - 36417893
Alignment:
Q  434 ttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaag 486  Q
    ||||||| || ||||||||||||| ||||||||||||| ||| ||||||||||    
T  36417945 ttgaaactttcgaaatttaaaggactaacttgagaattctgttaaactaaaag 36417893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 36418341 - 36418285
Alignment:
Q  126 tgatgctcatgtagccactacgttgttgacttgaattaaaatgttgtcttttaaaag 182  Q
    ||||||| ||||||||  || ||||||||||||||| |||| |||||||||||||||    
T  36418341 tgatgctgatgtagccgttaagttgttgacttgaatcaaaacgttgtcttttaaaag 36418285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 405 - 457
Target Start/End: Original strand, 41282474 - 41282526
Alignment:
Q  405 gaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaagga 457  Q
    ||||||||||| ||||||||||||||| ||||| || ||||||| ||||||||    
T  41282474 gaaatgatttaaaaactaaaatgacttgtttgagacttttgaaacttaaagga 41282526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 286 - 373
Target Start/End: Original strand, 5734830 - 5734917
Alignment:
Q  286 atttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacat 373  Q
    ||||||| ||| | || ||| |||||||||||| | | |||||||||| ||||| |||||||  |||||||||| ||||||| |||||    
T  5734830 atttgtgatcaataaacgtagcattttgacaccatcgggcttttaaaaggcagcattttgatttaagtcaacaacttaacggttacat 5734917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 510 - 553
Target Start/End: Complemental strand, 23251701 - 23251658
Alignment:
Q  510 ttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaa 553  Q
    ||||||||||||| ||||| |||||||||||| |||||||||||    
T  23251701 ttaaaggactaacctgaaatttttgtcaaacttaaaggaccaaa 23251658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 491 - 550
Target Start/End: Original strand, 30738261 - 30738320
Alignment:
Q  491 tatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggacc 550  Q
    ||||| ||||||||||||| |||||||| ||||||| |||| ||||||| ||||| ||||    
T  30738261 tatttgaaacttttgaaacataaaggacaaacttgagaattctgtcaaattaaaatgacc 30738320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 309 - 368
Target Start/End: Complemental strand, 32459611 - 32459552
Alignment:
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggc 368  Q
    ||||||||| ||||||| ||||||||| |||||||||||| ||| || ||| ||||||||    
T  32459611 ttttgacacactggagcctttaaaatgtagcgttttgatctaaggcagcaacttaacggc 32459552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 478 - 553
Target Start/End: Complemental strand, 34444989 - 34444914
Alignment:
Q  478 aactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaa 553  Q
    |||| ||||||||||||||||| ||   ||||||||||||||||   || | |||||||||||| |||||||||||    
T  34444989 aacttaaagaatctatttaaaatttaaaaaacttaaaggactaatccgatatttttgtcaaacttaaaggaccaaa 34444914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 405 - 454
Target Start/End: Complemental strand, 14620829 - 14620780
Alignment:
Q  405 gaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaa 454  Q
    |||||| |||| ||||||||||||||||||||| || ||||||| |||||    
T  14620829 gaaatgttttagaaactaaaatgacttatttgagacttttgaaacttaaa 14620780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 501 - 550
Target Start/End: Complemental strand, 35190025 - 35189976
Alignment:
Q  501 ttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggacc 550  Q
    |||||||||||||||||||||||||  | || ||||||||||||| ||||    
T  35190025 ttttgaaacttaaaggactaacttgggagttctgtcaaactaaaatgacc 35189976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 320 - 373
Target Start/End: Original strand, 38405436 - 38405489
Alignment:
Q  320 tggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacat 373  Q
    ||||||||||||||| || | ||||||||||||| ||||| ||||||| |||||    
T  38405436 tggagcttttaaaatacaacattttgatccaagttaacaacttaacggttacat 38405489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 173; Significance: 1e-92; HSPs: 106)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 184 - 567
Target Start/End: Complemental strand, 27995439 - 27995047
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactg 283  Q
    ||||||||| | ||| |||||||||||||||||||  || |||||||||||||| || | |||||||||||||||| ||||||||||||||| |||| ||    
T  27995439 taatggtcacatatgatcatttatagtgctagaaatgcagctatttacaacaacgaaagcctttctagcactattaaacgacatttatagtgctaaaatg 27995340  T
Q  284 atatttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaat 383  Q
    |||||||||  |||| || ||||||||||||||||||| ||||||||| | | ||| |||||||| |||||||||| |||||||| |||| || ||||||    
T  27995339 atatttgtgaccattaaacgtaacattttgacaccctgaagcttttaataggaagcattttgatcaaagtcaacaacttaacggcaacatcaacatcaat 27995240  T
Q  384 taattattaactcac---------aacagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatg 474  Q
    |||||||||||| ||         ||||| |||||  ||||| ||||||||| |||||||||| || ||||||| |||||||||||||||||||||| ||    
T  27995239 taattattaactgacagcaggggtaacagtgaaatagtttatcaactaaaattacttatttgatacttttgaaacttaaaggattaacttgagaattctg 27995140  T
Q  475 tcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    ||||| |||||  |||||||| ||| ||||||||||||||  |||||||||| |||| |||||||||||||||||||||| || |||||||||    
T  27995139 tcaaattaaaatgatctatttcaaatttttgaaacttaaaacactaacttgagaattctgtcaaactaaaaggaccaaacgtgatatttggcc 27995047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 184 - 565
Target Start/End: Original strand, 39958940 - 39959330
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactg 283  Q
    ||||||||| ||||| |||||||||||||||||||| || || |||||| |||||||||||||||||||||||||| || |||||||||||| || | ||    
T  39958940 taatggtcacaaatgatcatttatagtgctagaaagtcagctgtttacaccaacaaatgtctttctagcactattaaacaacatttatagtgctacaatg 39959039  T
Q  284 atatttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaat 383  Q
    |||||||||  |||| || ||||| |||||||| |||| | ||| || || ||||||||||||||||||||||||| ||||||||| ||| |  ||||||    
T  39959040 atatttgtgaccattaaacgtaacgttttgacatcctgaaacttctacaaggcagcgttttgatccaagtcaacaacttaacggctgcatcagcatcaat 39959139  T
Q  384 taattattaactcac---------aacagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatg 474  Q
    |||||||||||| ||         ||| | |||||  ||||| || |||||  || |||||||||| ||||||| ||||| ||||||||||  |||| ||    
T  39959140 taattattaactgacatcagcgttaacggtgaaatagtttatcaagtaaaagaacctatttgaaacttttgaaacttaaatgattaacttggaaattctg 39959239  T
Q  475 tcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttgg 565  Q
    ||||||||||||||||||||| |||||||| ||| ||||| |||||| || |||||| |||||||||||||||||||||| ||||||||||    
T  39959240 tcaaactaaaagaatctatttgaaacttttcaaatttaaatgactaatttaaaaattctgtcaaactaaaaggaccaaacgtggtatttgg 39959330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 184 - 567
Target Start/End: Complemental strand, 5559489 - 5559093
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactattt--acaacaacaaatgtctttctagcactattagacgacatttatagtgataaac 281  Q
    ||||||||| ||||  |||||||||||||||||||| ||  |||||  |||||||||||||  |||||||||| |||| || ||||||||| || || |     
T  5559489 taatggtcacaaataatcatttatagtgctagaaaggcagatatttttacaacaacaaatgcatttctagcacaattaaacaacatttataatgctagaa 5559390  T
Q  282 tgatatttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatca 381  Q
    |||||||||||  |||| |  ||||| |||||||||||||||| |||||||| || |||||||||||||||||||||| |||| | |||||| || ||||    
T  5559389 tgatatttgtgaccattaaccgtaacgttttgacaccctggagattttaaaaggcggcgttttgatccaagtcaacaacttaatgactacatcaacatca 5559290  T
Q  382 attaattattaactcac---------aacagagaaatgatttataaactaaaatgacttatttgaaacctttgaaa-tttaaaggattaacttgagaatt 471  Q
    |||||||||||||| ||         ||| | |||||  ||||| |||||||| ||| |||||||||| ||||||| || |||||| ||||||| |||||    
T  5559289 attaattattaactgactgcaggggtaacggtgaaatagtttatcaactaaaaggacctatttgaaacttttgaaacttaaaaggactaacttgggaatt 5559190  T
Q  472 atgtcaaactaaaagaatctatttaaaacttttgaaactt-aaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
     | |||||||||||| |||||||| ||||||||||||||| ||||||||||||||  |||| ||||||| |||||||||||||| ||||||||||||    
T  5559189 ttatcaaactaaaaggatctatttgaaacttttgaaacttaaaaggactaacttgggaattctgtcaaattaaaaggaccaaacgtggtatttggcc 5559093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 133; E-Value: 9e-69
Query Start/End: Original strand, 184 - 558
Target Start/End: Complemental strand, 42990879 - 42990495
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactg 283  Q
    |||| |||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| || || | ||    
T  42990879 taatagtcataaatgatcttttatagtgctagaaatacaactatttacaacaacaaatgtctttctagcactattaaacgacatttataatgctataatg 42990780  T
Q  284 at-atttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaa 382  Q
    || || ||||   ||| || ||||||||||||||||||  | ||||||||| ||||||||||||||||||||||||| |||||||||||||||  |||||    
T  42990779 atcatctgtgacgattaaacgtaacattttgacaccctataacttttaaaaggcagcgttttgatccaagtcaacaacttaacggctacattagcatcaa 42990680  T
Q  383 ttaattattaactcacaaca---------gagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattat 473  Q
    ||||||||||||| ||||||         |  ||||  | ||| |||||||||||| || || |||| ||| ||| |||||  |||||||||| |||| |    
T  42990679 ttaattattaactgacaacatgggtaacggtaaaatagtgtatcaactaaaatgacataattaaaacttttaaaacttaaaaaattaacttgaaaattct 42990580  T
Q  474 gtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatgg 558  Q
    ||| ||||||||  | ||| ||||||||||  |||||||||||||||| || |||||| | || ||||||||| || ||||||||    
T  42990579 gtcgaactaaaatgacctaattaaaactttcaaaacttaaaggactaatttaaaaattctttccaactaaaagcactaaacatgg 42990495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 184 - 567
Target Start/End: Original strand, 33235297 - 33235690
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactg 283  Q
    ||||||||| ||||| |||||||||||| |||||| |||  ||||||||||||||||||||||||||||||||||| | ||||||||||||| || | ||    
T  33235297 taatggtcacaaatgatcatttatagtgttagaaaaacagttatttacaacaacaaatgtctttctagcactattaaatgacatttatagtgctagaatg 33235396  T
Q  284 at-atttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaa 382  Q
    || |||||||  |||| || ||||||||||| ||||||| ||||||||||||||  | ||||||||||||||||||| || |||||||||| | ||||||    
T  33235397 atcatttgtgaccattaaacgtaacattttggcaccctgaagcttttaaaatgcgacattttgatccaagtcaacaacttgacggctacatcagtatcaa 33235496  T
Q  383 ttaattattaactcac---------aacagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattat 473  Q
    ||||||||||||| ||         ||||| |||||  ||||| |||||||||||| ||||||||   ||||||| |||||||| |||||||| |||| |    
T  33235497 ttaattattaactgacaacaagggtaacagtgaaatagtttatcaactaaaatgacctatttgaagtttttgaaacttaaaggactaacttgataatttt 33235596  T
Q  474 gtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    ||||||||||||| | | | ||||||||||  |||| ||||| | ||| ||   |||| ||| ||||||||| || |||||||  |||||||||    
T  33235597 gtcaaactaaaaggaccaaattaaaactttcaaaacgtaaagaaataatttaggaattctgtgaaactaaaatgatcaaacataatatttggcc 33235690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 265 - 564
Target Start/End: Complemental strand, 28256791 - 28256482
Alignment:
Q  265 catttatagtgataaactgatatttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaa 364  Q
    ||||||||||| |||| |||||||||||  |||| || ||||| |||||||||||| ||| |||||||| ||||||||||||||||||||||||| ||||    
T  28256791 catttatagtgctaaaatgatatttgtgaccattaaacgtaacgttttgacaccctagagtttttaaaaggcagcgttttgatccaagtcaacaacttaa 28256692  T
Q  365 cggctacattaatatcaattaattattaactcacaacagag----------aaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaa 454  Q
    | ||||||| || ||||| |||||||||||  ||||||| |          ||||  ||||| ||||||||  || |||||||||| |||||||||||||    
T  28256691 ctgctacatcaacatcaaataattattaacagacaacagggggtaacagtgaaatagtttatcaactaaaagaacctatttgaaacttttgaaatttaaa 28256592  T
Q  455 ggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaac 554  Q
    ||| ||||||||||||| |||||||||||||| |||| |||||||||||||||| |||||| | |||||||  |||| |||||||||||||||| ||||     
T  28256591 ggactaacttgagaattctgtcaaactaaaaggatctctttaaaacttttgaaatttaaagaagtaacttgggaattctgtcaaactaaaaggatcaaat 28256492  T
Q  555 atggtatttg 564  Q
    ||| ||||||    
T  28256491 atgatatttg 28256482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 184 - 546
Target Start/End: Original strand, 1348904 - 1349269
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactg 283  Q
    ||||||||| ||||| |||||| |||||||||||||||| ||||||| ||||| |||||||||||||||||||||| |||||||||||| || || |       
T  1348904 taatggtcacaaatgatcatttgtagtgctagaaagacagctatttaaaacaataaatgtctttctagcactattaaacgacatttatattgctaga--- 1349000  T
Q  284 atatttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaat 383  Q
          ||| ||||| || ||||| ||||||||| ||| | ||||||||| |||||||||||||| |||||||||| |||||| |||||| || || |      
T  1349001 ------gtgatcattaaacgtaacgttttgacactctgaaacttttaaaaggcagcgttttgatcaaagtcaacaacttaacgactacatcaacataata 1349094  T
Q  384 taattattaactcac---------aacagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaagga---ttaacttgagaatt 471  Q
    |||||||||||| ||         ||| | |||||| ||||| |||||||||||| |||||||||| ||||||| ||||||||    ||| |||  ||||    
T  1349095 taattattaactgacaattggggtaacggtgaaatggtttatcaactaaaatgacctatttgaaacttttgaaacttaaaggacttataagttggaaatt 1349194  T
Q  472 atgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaag 546  Q
     |||||||||||||  || |||||||||||||||||||||||| |||||||||  ||||| ||||||||||||||    
T  1349195 ctgtcaaactaaaatgatttatttaaaacttttgaaacttaaaagactaacttagaaattatgtcaaactaaaag 1349269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 184 - 395
Target Start/End: Complemental strand, 1441334 - 1441124
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactg 283  Q
    ||||||||| ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||| || || ||||| ||||||||||||||| |||| ||    
T  1441334 taatggtcacaaatgatcatttatagtgctagaaa-acagctatttacaacaacaaatgtctttttaccattattaaacgacatttatagtgctaaaatg 1441236  T
Q  284 atatttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaat 383  Q
    |||||||||  |||| ||  |||| ||||||||||   || ||||||||||||||||||||||||||||| |||||||||||| |||||| || ||||||    
T  1441235 atatttgtgaccattaaacataacgttttgacaccgcagaacttttaaaatgcagcgttttgatccaagttaacaatttaacgactacatcaacatcaat 1441136  T
Q  384 taattattaact 395  Q
    ||||||||||||    
T  1441135 taattattaact 1441124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 187 - 554
Target Start/End: Original strand, 8039910 - 8040271
Alignment:
Q  187 tggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactgata 286  Q
    |||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||| |||| |||||||||| |||| |||||    
T  8039910 tggtcacaaatgatcatttatagtgctagaaagacagctatttacaacaacaaatgtctttatagcattattaaacgatatttatagtgctaaaatgata 8040009  T
Q  287 tttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaa 386  Q
    ||| ||  |||| ||  ||||||||||||| |||||||||||||||| |||||||||| ||| |||||||||| ||||||||     ||  |||||||||    
T  8040010 tttatgaccattaaacataacattttgacatcctggagcttttaaaaggcagcgttttaatcaaagtcaacaacttaacggc-----tagcatcaattaa 8040104  T
Q  387 ttattaactcac---------aacagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtca 477  Q
    ||||||||| ||         ||| | |||||  || || |||||||| ||| ||||||||||         |||||||| ||||||| | ||| |||||    
T  8040105 ttattaactgacagcaggggtaacggtgaaatagttcatcaactaaaaggacctatttgaaac---------ttaaaggactaacttg-ggattctgtca 8040194  T
Q  478 aactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaac 554  Q
    | ||||||| |||||||| ||| |||||||||||||| |||||| ||| |||||  || ||||||||||||||||||    
T  8040195 agctaaaaggatctatttgaaatttttgaaacttaaaagactaatttggaaattccgttaaactaaaaggaccaaac 8040271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 187 - 563
Target Start/End: Original strand, 35215072 - 35215458
Alignment:
Q  187 tggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactgat- 285  Q
    |||||| ||||| |||||||||||||||||| |||| ||||||||||| | |||||||||||||||||||||| | |||| || ||||| || | | ||     
T  35215072 tggtcacaaatgatcatttatagtgctagaatgacatctatttacaaccataaatgtctttctagcactattaaatgacacttgtagtgttagaattatc 35215171  T
Q  286 atttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaatta 385  Q
    |||||||   ||| || |||||||||||||||| || ||||||||||| ||| || ||||||||| || ||||| ||||||||||||| || || | |||    
T  35215172 atttgtgacgattaaacgtaacattttgacaccttgaagcttttaaaaggcaacgctttgatccatgttaacaacttaacggctacatcaacatgagtta 35215271  T
Q  386 attattaactcacaacagag---------aaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtc 476  Q
    |||||||||| ||||||  |         ||||  ||||| ||||||||||| ||||||||||| ||| ||| ||||| || ||| |||  |||| ||||    
T  35215272 attattaactaacaacaagggtaacaatgaaatagtttatcaactaaaatgagttatttgaaacttttaaaacttaaaagactaatttggaaattctgtc 35215371  T
Q  477 aaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtattt 563  Q
    ||| |||||  |  || || ||| ||| |||| ||||||||||||||||||||||||||||||||||||||| ||||| || |||||    
T  35215372 aaattaaaatgacttaattgaaattttcgaaatttaaaggactaacttgaaaattttgtcaaactaaaaggatcaaacgtgatattt 35215458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 184 - 350
Target Start/End: Original strand, 20184029 - 20184195
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactg 283  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| | ||||||||| ||| || | ||    
T  20184029 taatggtcacaaatgatcatttatagtgctagaaagacaactatttacaacaac-aatgtctttctagcattattaaaagacatttattgtgctagaatg 20184127  T
Q  284 at-atttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatcca 350  Q
    || ||||| |  |||| |||||||| |||||||||| || |||||||||||  |||||||||||||||    
T  20184128 atcatttgcgaccattaaatgtaacgttttgacaccttgaagcttttaaaagacagcgttttgatcca 20184195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 411 - 566
Target Start/End: Original strand, 20366520 - 20366675
Alignment:
Q  411 atttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaact 510  Q
    |||||| |||||||| ||| |||||||||| |||||||  ||||||| ||||||| ||||| |||||||||||||| |||| ||  ||||||||||||||    
T  20366520 atttatcaactaaaaggacatatttgaaacttttgaaacctaaaggactaacttgcgaattttgtcaaactaaaaggatcttttggaaacttttgaaact 20366619  T
Q  511 taaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggc 566  Q
    ||||||||||||||| ||||| |||  ||||||||||||||||  |||||||||||    
T  20366620 taaaggactaacttggaaattctgtttaactaaaaggaccaaatgtggtatttggc 20366675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 194 - 567
Target Start/End: Original strand, 23679292 - 23679659
Alignment:
Q  194 aaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactgatatttgtgt 293  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||| | ||||||||||||| || |     |||| ||     
T  23679292 aaatgatcatttatagtgctagaaagacaactatttacaataacaaatgcatttctagcactattaaatgacatttatagtgctaga-----atttatga 23679386  T
Q  294 tcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaattattaa 393  Q
      | | |   ||||||||||| |||||||||||||||||    |  |||||||||||||| ||||| ||||||||||||| |  ||||||||||||||||    
T  23679387 cgactaagaataacattttgagaccctggagcttttaaacgataatgttttgatccaagttaacaacttaacggctacatcagcatcaattaattattaa 23679486  T
Q  394 ctcac---------aacagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaa 484  Q
    || ||         ||| | |||||  ||||| ||||||||| |  ||||| |||| ||||||| ||||| || ||||||||||||| ||||||||||||    
T  23679487 ctgacagcaagggtaacggtgaaatagtttatcaactaaaataatctattttaaacttttgaaacttaaa-gactaacttgagaattctgtcaaactaaa 23679585  T
Q  485 agaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    |||| ||| || |||||| |||         |||||| |||  |||||| ||||||||||| |||||||| ||||||||||||    
T  23679586 agaacctaattgaaacttatga---------gactaatttgtgaattttatcaaactaaaaagaccaaacgtggtatttggcc 23679659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 418 - 564
Target Start/End: Original strand, 33879505 - 33879651
Alignment:
Q  418 aactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaagga 517  Q
    |||||||| ||| |||||||||| ||||||| ||||||||||||||||  |||| ||||||| |||||| | ||| || ||||||| |||||||||||||    
T  33879505 aactaaaaggacctatttgaaacttttgaaacttaaaggattaacttggaaattctgtcaaattaaaaggacctaattgaaactttcgaaacttaaagga 33879604  T
Q  518 ctaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttg 564  Q
    ||||||||  |||| ||||||||||||||||||||| ||||||||||    
T  33879605 ctaacttgtgaattctgtcaaactaaaaggaccaaaaatggtatttg 33879651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 432 - 548
Target Start/End: Complemental strand, 21413047 - 21412931
Alignment:
Q  432 atttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaatt 531  Q
    |||| |||| ||||||| ||||| || ||||||||||||| ||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  21413047 atttaaaacttttgaaacttaaaagactaacttgagaattctgtgaaactaaaatgatctatttaaaacttttgaaacttaaaggactaacttgaaaatt 21412948  T
Q  532 ttgtcaaactaaaagga 548  Q
     ||||||||||||||||    
T  21412947 ctgtcaaactaaaagga 21412931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 412 - 563
Target Start/End: Original strand, 19925321 - 19925472
Alignment:
Q  412 tttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaactt 511  Q
    ||||| |||| ||| ||| |||||||||| ||||||| |||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||| | |||||    
T  19925321 tttatcaactgaaaggacctatttgaaacttttgaaacttaaaggactaacttgggaattctgtcaaactaaaaggatctaattaaaactttcgcaactt 19925420  T
Q  512 aaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtattt 563  Q
    |||||||||| |||  ||||||||||||||||||| ||||||  ||||||||    
T  19925421 aaaggactaagttgggaattttgtcaaactaaaagaaccaaaagtggtattt 19925472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 184 - 395
Target Start/End: Original strand, 5805301 - 5805511
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactg 283  Q
    ||||||||| ||||| ||||||||||||||| ||||| | |||||||||| ||||||||||||||||||||||||| | |  |||||||||| || | ||    
T  5805301 taatggtcacaaatgatcatttatagtgctaaaaagaaagctatttacaataacaaatgtctttctagcactattaaatg--atttatagtgttagaatg 5805398  T
Q  284 at-atttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaa 382  Q
    || |||||||   |||  | ||||  |||||||||||| || |||||||||  |||||||||||||||||||||||| |||| |||||||| |  |||      
T  5805399 atcatttgtgacgattacacgtaaagttttgacaccctagaacttttaaaagacagcgttttgatccaagtcaacaacttaaaggctacatcagcatcgg 5805498  T
Q  383 ttaattattaact 395  Q
    |||||||||||||    
T  5805499 ttaattattaact 5805511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 309 - 563
Target Start/End: Complemental strand, 5805291 - 5805028
Alignment:
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaattattaact---------caca 399  Q
    |||||||||||| || ||||||||||||||| ||||||||||||||||||| |||| ||| |||| |  ||||||||| |    |||          | |    
T  5805291 ttttgacaccctcgaacttttaaaatgcagcattttgatccaagtcaacaacttaaaggccacatcagcatcaattaaatggagactgataggagggaaa 5805192  T
Q  400 acagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaa 499  Q
    |||  |||||  ||||| |||||||| ||| || || |||| ||||||| |||||||| || |||||||||| |||||||||||||| | ||| || |||    
T  5805191 acaacgaaatagtttatcaactaaaaggacctagttaaaacttttgaaacttaaaggaatagcttgagaattctgtcaaactaaaaggacctaattgaaa 5805092  T
Q  500 cttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtattt 563  Q
    |||| |||||||||||||||||||||| |||| |||||||||||||||||| ||  ||||||||    
T  5805091 ctttcgaaacttaaaggactaacttgagaattctgtcaaactaaaaggaccgaaagtggtattt 5805028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 442 - 564
Target Start/End: Original strand, 31893489 - 31893611
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaact 541  Q
    ||||||| |||||||| ||||||||||||| |||||||||||||| | ||| || |||||||| |||||||||||||||||||  ||||| |||||||||    
T  31893489 tttgaaacttaaaggactaacttgagaattctgtcaaactaaaaggacctaattgaaacttttaaaacttaaaggactaacttagaaattctgtcaaact 31893588  T
Q  542 aaaaggaccaaacatggtatttg 564  Q
    |||||||||||| ||| ||||||    
T  31893589 aaaaggaccaaaaatgatatttg 31893611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 418 - 567
Target Start/End: Original strand, 5805583 - 5805731
Alignment:
Q  418 aactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaagga 517  Q
    |||||||||||| |||||||||| ||||||| ||||| ||||||||||| ||||  ||||||||||||| |  || || |||||||  ||||||||| ||    
T  5805583 aactaaaatgacctatttgaaacttttgaaacttaaaagattaacttgaaaattcagtcaaactaaaaggacataattgaaactttcaaaacttaaatga 5805682  T
Q  518 ctaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    ||||||| ||||||||||||||||||||||||||||  | ||||||||||    
T  5805683 ctaactt-aaaattttgtcaaactaaaaggaccaaaggtagtatttggcc 5805731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 412 - 567
Target Start/End: Complemental strand, 23150780 - 23150625
Alignment:
Q  412 tttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaactt 511  Q
    ||||| ||||||||||| ||||||||||| ||||||| ||||| || |||  |||||||| ||||||| |||||  |  || || |||||||  ||| ||    
T  23150780 tttatcaactaaaatgatttatttgaaacttttgaaacttaaaagactaatctgagaattctgtcaaattaaaatgacttaattgaaactttcaaaattt 23150681  T
Q  512 aaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    ||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||    
T  23150680 aaaggactaacttgagaattatgtcaaactaaaaggaccaaacatagtatttggcc 23150625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 308 - 553
Target Start/End: Complemental strand, 35215060 - 35214806
Alignment:
Q  308 attttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaattattaactcacaacagag-- 405  Q
    ||||||||||||| |||||||||||| ||||| ||||||||||||||||||| | ||||||||||| || |||| ||||      ||| ||||||| |      
T  35215060 attttgacaccctcgagcttttaaaa-gcagcattttgatccaagtcaacaactaaacggctacatcaacatcagttaaacggagactgacaacaggggt 35214962  T
Q  406 -------aaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaa 498  Q
           ||||  ||||| |||||||| ||| |||||||||  ||||||| ||||| || ||||||||||||| |||||||||||||| | ||| || ||    
T  35214961 aacggtgaaatagtttatcaactaaaaagacctatttgaaatttttgaaacttaaaagactaacttgagaattctgtcaaactaaaaggacctaattgaa 35214862  T
Q  499 acttttgaaactt-aaaggactaacttgaaaattttgtcaaactaaaaggaccaaa 553  Q
    ||||||||||||| |||| ||||||||  ||||| |||||||||||||||| ||||    
T  35214861 acttttgaaacttaaaagaactaacttagaaattctgtcaaactaaaaggatcaaa 35214806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 417 - 563
Target Start/End: Complemental strand, 21413002 - 21412856
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaagg 516  Q
    ||||||||||||  ||||| |||| ||||||| |||||||| |||||||| |||| |||||||||||||| ||||| || |||||||  |||||||||||    
T  21413002 aaactaaaatgatctatttaaaacttttgaaacttaaaggactaacttgaaaattctgtcaaactaaaaggatctaattgaaactttcaaaacttaaagg 21412903  T
Q  517 actaacttgaaaattttgtcaaactaaaaggaccaaacatggtattt 563  Q
    | |||||| | |||| ||||||||||||||||| ||| ||| |||||    
T  21412902 attaacttaagaattctgtcaaactaaaaggactaaaaatgatattt 21412856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 442 - 567
Target Start/End: Original strand, 5559631 - 5559755
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaact 541  Q
    ||||||| |||||||| ||||||| ||||| |||||||||||||| | ||| || |||||||  ||||||||||||||||||||  ||||||||||||||    
T  5559631 tttgaaacttaaaggactaacttgggaattctgtcaaactaaaaggacctaattgaaacttta-aaacttaaaggactaacttgggaattttgtcaaact 5559729  T
Q  542 aaaaggaccaaacatggtatttggcc 567  Q
    ||||||||||||  ||||||||||||    
T  5559730 aaaaggaccaaaagtggtatttggcc 5559755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 303 - 395
Target Start/End: Complemental strand, 5075542 - 5075450
Alignment:
Q  303 gtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaattattaact 395  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |  |||| |||||||||||||    
T  5075542 gtaacgttttgacaccctcgagcttttaaaatgcagcgttttgatccaagtcaacaacttaacggctacatcagcatcagttaattattaact 5075450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 417 - 564
Target Start/End: Complemental strand, 36566414 - 36566267
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaactt-gagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaag 515  Q
    |||||||||||||||||||||||  ||||||| |||||| | |||||| ||||||| |||||||||||||  | ||| || |||||||  |||||||||     
T  36566414 aaactaaaatgacttatttgaaaattttgaaacttaaag-actaactttgagaattctgtcaaactaaaatgacctaattgaaactttcaaaacttaaat 36566316  T
Q  516 gactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttg 564  Q
    ||||||||| | |||| |||||||||||||||||||||| |||||||||    
T  36566315 gactaacttaagaattctgtcaaactaaaaggaccaaacgtggtatttg 36566267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 412 - 567
Target Start/End: Complemental strand, 20366188 - 20366035
Alignment:
Q  412 tttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaactt 511  Q
    ||||| |||||||| ||| ||||||||||  ||||||| ||| ||||| ||| ||||||| |||||||||||||| |  || || ||||||| |||||||    
T  20366188 tttatcaactaaaaagacctatttgaaactcttgaaatataagggattgact-gagaattctgtcaaactaaaaggacataattgaaactttcgaaactt 20366090  T
Q  512 aaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    ||||||||||||||| |||| ||| ||||||||||||||||| ||| |||||||||    
T  20366089 aaaggactaacttgagaattctgt-aaactaaaaggaccaaaaatgatatttggcc 20366035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 412 - 563
Target Start/End: Complemental strand, 34951368 - 34951218
Alignment:
Q  412 tttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaactt 511  Q
    ||||| ||||||||||||||||||||||| ||||||| |||||||| |||||| ||||||||||||||| ||||| | ||| || ||||||| |||||||    
T  34951368 tttatcaactaaaatgacttatttgaaacttttgaaacttaaaggactaacttaagaattatgtcaaacgaaaaggacctaattgaaactttcgaaactt 34951269  T
Q  512 aaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtattt 563  Q
    ||| |||||  |||  ||| |||||||||||||| || ||||  ||||||||    
T  34951268 aaa-gactatgttgggaatattgtcaaactaaaaagatcaaaagtggtattt 34951218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 184 - 289
Target Start/End: Complemental strand, 29590955 - 29590850
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactg 283  Q
    |||| |||| ||||| | |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||  ||| ||    
T  29590955 taatagtcacaaatgataatttgtagtgctagaaaggcaactatttacaacaacaaatgtctttctagcactattaaatgacatttatagtgccaaaatg 29590856  T
Q  284 atattt 289  Q
    ||||||    
T  29590855 atattt 29590850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 421 - 543
Target Start/End: Original strand, 29591047 - 29591171
Alignment:
Q  421 taaaatgacttatttgaaacctttgaaatttaaaggatta--acttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggac 518  Q
    ||||||||||||||| |||| ||||||| |||||||||||  ||||| | ||| |||||||||||||  | ||| |||||||||||||||||||||||||    
T  29591047 taaaatgacttatttaaaacttttgaaacttaaaggattataacttgcggattttgtcaaactaaaatgacctaattaaaacttttgaaacttaaaggac 29591146  T
Q  519 taacttgaaaattttgtcaaactaa 543  Q
    |||||||| |||| | |||||||||    
T  29591147 taacttgataattatatcaaactaa 29591171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 412 - 545
Target Start/End: Complemental strand, 33235175 - 33235042
Alignment:
Q  412 tttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaactt 511  Q
    ||||| |||||||||||| | |||||||| |||||||||||||||  ||||||| ||||| |||||||| ||||| | ||| || |||||||| ||| ||    
T  33235175 tttatcaactaaaatgacctctttgaaacttttgaaatttaaaggtctaacttgggaattctgtcaaaccaaaaggacctaattgaaacttttaaaattt 33235076  T
Q  512 aaaggactaacttgaaaattttgtcaaactaaaa 545  Q
    |||||| |||||||| |||| |||||||||||||    
T  33235075 aaaggattaacttgagaattctgtcaaactaaaa 33235042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 309 - 549
Target Start/End: Complemental strand, 1286621 - 1286374
Alignment:
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaattattaactcacaacagag--a 406  Q
    ||||||||||||||||||||||||| | || |||| ||||||||||||||| ||||||||||||| || |||| ||||      ||| ||| ||| |  |    
T  1286621 ttttgacaccctggagcttttaaaaagtagtgtttggatccaagtcaacaacttaacggctacatcaacatcagttaaacggagactgacagcaggggta 1286522  T
Q  407 a-----atgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaact 501  Q
    |     || |||||| ||||||||  || |||||||||| ||||||| ||||| || |||||| |||||| | |||||||||||| | ||| || |||||    
T  1286521 acggtgataatttatcaactaaaagaacctatttgaaacttttgaaacttaaaagactaactttagaattctctcaaactaaaaggacctaattgaaact 1286422  T
Q  502 tttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggac 549  Q
    ||||||| |||||  ||||| ||||||||| | |||||||||||||||    
T  1286421 tttgaaatttaaaaaactaatttgaaaattctatcaaactaaaaggac 1286374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 417 - 553
Target Start/End: Complemental strand, 21433280 - 21433144
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaagg 516  Q
    |||||||||  ||||||||||||| ||||||| ||||| || ||||||| ||||| | |||||||||||| |  || || |||| || ||||||||||||    
T  21433280 aaactaaaagaacttatttgaaacttttgaaacttaaatgactaacttgggaattctttcaaactaaaaggacttaattgaaacattcgaaacttaaagg 21433181  T
Q  517 actaacttgaaaattttgtcaaactaaaaggaccaaa 553  Q
    |||||||||  ||||||||||||||||||||| ||||    
T  21433180 actaacttgtgaattttgtcaaactaaaaggatcaaa 21433144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 434 - 553
Target Start/End: Complemental strand, 1346599 - 1346480
Alignment:
Q  434 ttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaatttt 533  Q
    ||||||| ||||||| |||||||| |||||||  ||||||||||||||||||| || || || ||||||| ||||||||||| |||||||| | |||| |    
T  1346599 ttgaaacttttgaaacttaaaggactaacttggaaattatgtcaaactaaaaggatttaattgaaactttcgaaacttaaagcactaacttaagaattct 1346500  T
Q  534 gtcaaactaaaaggaccaaa 553  Q
    ||||||||||||||| ||||    
T  1346499 gtcaaactaaaaggatcaaa 1346480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 431 - 553
Target Start/End: Complemental strand, 40904813 - 40904691
Alignment:
Q  431 tatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaat 530  Q
    |||||||||| ||| ||| ||||| || ||| |||| ||||||||||||||||||| | ||| || |||||||| ||||||||| ||||||||||| |||    
T  40904813 tatttgaaacttttaaaacttaaatgactaatttgaaaattatgtcaaactaaaaggacctaattgaaacttttaaaacttaaaagactaacttgagaat 40904714  T
Q  531 tttgtcaaactaaaaggaccaaa 553  Q
    | |||||||| ||||||||||||    
T  40904713 tatgtcaaaccaaaaggaccaaa 40904691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 453 - 550
Target Start/End: Original strand, 33879480 - 33879577
Alignment:
Q  453 aaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggacc 550  Q
    ||||| ||||||| |||||||||| ||||||||| | |||||| ||||||||||||||||||||| ||||||| ||||| ||||||| ||||||||||    
T  33879480 aaggactaacttgggaattatgtcgaactaaaaggacctatttgaaacttttgaaacttaaaggattaacttggaaattctgtcaaattaaaaggacc 33879577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 468 - 564
Target Start/End: Original strand, 34951501 - 34951597
Alignment:
Q  468 aattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttg 564  Q
    |||| |||||||||||||| ||||| || ||||||| |||||||||||||||||||||| |||| ||||||||||||| ||||||| || |||||||    
T  34951501 aattgtgtcaaactaaaaggatctaattgaaactttcgaaacttaaaggactaacttgataattctgtcaaactaaaaagaccaaaaatagtatttg 34951597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 416 - 567
Target Start/End: Complemental strand, 19925241 - 19925091
Alignment:
Q  416 taaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaag 515  Q
    |||||||||| | | ||||||| |  ||||||| |||||||| ||| | || |||| |||||||||||||| ||||| || ||||||| ||||||| |||    
T  19925241 taaactaaaaggtcctatttgatatttttgaaacttaaaggactaattgga-aattgtgtcaaactaaaaggatctaattgaaactttcgaaacttgaag 19925143  T
Q  516 gactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    || ||||||| ||||| ||||||||||||| ||||||| || ||||||||||    
T  19925142 gagtaacttggaaattctgtcaaactaaaaagaccaaaaatagtatttggcc 19925091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 463 - 550
Target Start/End: Complemental strand, 40904841 - 40904754
Alignment:
Q  463 ttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggacc 550  Q
    ||||||||| ||||||| |||||| |||||||| |||||||| ||||||||| |||||| ||||||||| ||||||||||||||||||    
T  40904841 ttgagaattctgtcaaattaaaaggatctatttgaaacttttaaaacttaaatgactaatttgaaaattatgtcaaactaaaaggacc 40904754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 433 - 550
Target Start/End: Complemental strand, 36566458 - 36566341
Alignment:
Q  433 tttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaac-ttgaaaatt 531  Q
    |||||||| |||||||||||||||| ||||||||||||| |||||||||||||  |  ||||| ||| |||||||||||||| ||||||| |||| ||||    
T  36566458 tttgaaacttttgaaatttaaaggactaacttgagaattttgtcaaactaaaatgacttatttgaaaattttgaaacttaaa-gactaactttgagaatt 36566360  T
Q  532 ttgtcaaactaaaaggacc 550  Q
     ||||||||||||| ||||    
T  36566359 ctgtcaaactaaaatgacc 36566341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 442 - 564
Target Start/End: Original strand, 41020137 - 41020258
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaact 541  Q
    ||||||| |||||| ||||||||   |||| |||||||||||||| ||||| ||||||||||  |||||||||  ||||||||| ||||| |||||||||    
T  41020137 tttgaaacttaaagaattaacttagaaattctgtcaaactaaaaggatctaattaaaactttcaaaacttaaa-aactaacttggaaattatgtcaaact 41020235  T
Q  542 aaaaggaccaaacatggtatttg 564  Q
    ||||||| |||| ||||||||||    
T  41020236 aaaaggatcaaaaatggtatttg 41020258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 478 - 563
Target Start/End: Original strand, 27995569 - 27995654
Alignment:
Q  478 aactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtattt 563  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||| | ||||| ||||||| ||||||| ||| |||||    
T  27995569 aactaaaaggatctatttaaaacttttgaaacttaaaggactaacttaaaaaatatgtcatactaaaaagaccaaaaatgatattt 27995654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 442 - 567
Target Start/End: Complemental strand, 31893361 - 31893236
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaact 541  Q
    ||||||| ||||| || ||||||  ||||| |||||||||||||  | ||| || ||||||| ||||||||||  |||||||||| |||| |||||||||    
T  31893361 tttgaaacttaaaagactaacttaggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaaaactaacttgagaattctgtcaaact 31893262  T
Q  542 aaaaggaccaaacatggtatttggcc 567  Q
    ||||| |||||| |||||||||||||    
T  31893261 aaaagaaccaaaaatggtatttggcc 31893236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 442 - 568
Target Start/End: Original strand, 22876867 - 22876992
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaact 541  Q
    ||||||| |||||||||||||||||||||| |||||||||||||  |  || || ||||||| ||||||||||  | ||||||| ||||| |||||||||    
T  22876867 tttgaaacttaaaggattaacttgagaattctgtcaaactaaaatgacttaattgaaactttcgaaacttaaa-aattaacttggaaattatgtcaaact 22876965  T
Q  542 aaaaggaccaaacatggtatttggccc 568  Q
    ||||||| ||||  |||||||| ||||    
T  22876966 aaaaggatcaaaagtggtatttagccc 22876992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 339 - 563
Target Start/End: Original strand, 1286706 - 1286936
Alignment:
Q  339 cgttttgatccaagtcaacaatttaacggctacattaatatcaattaattattaactcac---------aacagagaaatgatttataaactaaaatgac 429  Q
    |||||||||||||||||| ||  |||| ||||||| | ||||||||||||||||||| ||         ||| | ||||| |||||| |||||||| |||    
T  1286706 cgttttgatccaagtcaagaacgtaacagctacatcagtatcaattaattattaactaacggcaggggtaacggtgaaataatttatcaactaaaa-gac 1286804  T
Q  430 ttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaa 529  Q
     ||||| |||| ||| ||| |||||||| ||| |||| |||| | ||||| || | || |||||||||||||||||||| ||||| |||| |||| ||||    
T  1286805 atatttaaaacttttaaaacttaaaggactaatttgaaaattctatcaaattatagga-tctatttaaaacttttgaaa-ttaaatgactgacttaaaaa 1286902  T
Q  530 ttttgtcaaactaaaaggaccaaacatggtattt 563  Q
    || | | |||||||||||||||||| | ||||||    
T  1286903 ttctatgaaactaaaaggaccaaactttgtattt 1286936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 478 - 546
Target Start/End: Complemental strand, 10619935 - 10619867
Alignment:
Q  478 aactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaag 546  Q
    ||||||||| | |||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  10619935 aactaaaaggacctatttgaaacttttgaaacttaaaggactaacttgacaattgtgtcaaactaaaag 10619867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 478 - 550
Target Start/End: Original strand, 31175946 - 31176018
Alignment:
Q  478 aactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggacc 550  Q
    ||||||||| | || ||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  31175946 aactaaaaggacctctttgaaacttttgaaacttaaaggactaacttggaaattctgtcaaactaaaaggacc 31176018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 442 - 553
Target Start/End: Original strand, 1441446 - 1441557
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaact 541  Q
    ||||||| ||||| || ||||||| ||||| | |||||||||||  | ||| || ||||||| ||||| |||||||||||||||  |||| |||||||||    
T  1441446 tttgaaacttaaaagactaacttgggaattctatcaaactaaaatgacctaattgaaactttcgaaacctaaaggactaacttgggaattatgtcaaact 1441545  T
Q  542 aaaaggaccaaa 553  Q
    ||||||||||||    
T  1441546 aaaaggaccaaa 1441557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 412 - 502
Target Start/End: Original strand, 4187673 - 4187763
Alignment:
Q  412 tttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaactt 502  Q
    ||||| |||||||||||| ||||| |||| ||| |||||||||||| |||||||| |||| ||||||| |||||| ||||| |||||||||    
T  4187673 tttatcaactaaaatgacctatttaaaacttttaaaatttaaaggactaacttgaaaattctgtcaaattaaaaggatctaattaaaactt 4187763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 309 - 502
Target Start/End: Complemental strand, 10620052 - 10619851
Alignment:
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaattattaact---------caca 399  Q
    |||||||| ||||||| |||||||| ||| | ||||||||||||||||||| ||||| | ||||| |  |||  |||||||||||||          | |    
T  10620052 ttttgacagcctggagtttttaaaa-gcaacattttgatccaagtcaacaacttaacagatacatcagcatctgttaattattaactggcagcagggata 10619954  T
Q  400 acagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaa 499  Q
    || | |||||  ||||| |||||||| ||| |||||||||| ||||||| |||||||| |||||||| |||| |||||||||||||||| ||| || |||    
T  10619953 acggtgaaatagtttatcaactaaaaggacctatttgaaacttttgaaacttaaaggactaacttgacaattgtgtcaaactaaaagaacctaattgaaa 10619854  T
Q  500 ctt 502  Q
    |||    
T  10619853 ctt 10619851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 478 - 548
Target Start/End: Complemental strand, 20101956 - 20101887
Alignment:
Q  478 aactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaagga 548  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||| | |||| |||||||||||    
T  20101956 aactaagagaatctatttaaaacttttaaaacttaaaggactaacttgaaaa-tctgtcgaactaaaagga 20101887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 442 - 548
Target Start/End: Original strand, 34951415 - 34951521
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaact 541  Q
    ||||||| ||||| || ||||||||||||| ||||||||||||||    ||||| | ||||||||||||||||||||| | ||  ||||| |||||||||    
T  34951415 tttgaaacttaaatgactaacttgagaattgtgtcaaactaaaaggtcatattttatacttttgaaacttaaaggactgatttagaaattgtgtcaaact 34951514  T
Q  542 aaaagga 548  Q
    |||||||    
T  34951515 aaaagga 34951521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 475 - 564
Target Start/End: Complemental strand, 8039741 - 8039652
Alignment:
Q  475 tcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttg 564  Q
    |||||||||||| | ||| || ||||||| ||||||||||| |||||||||| |||| ||||||||||||||||| |||  |||||||||    
T  8039741 tcaaactaaaaggacctaattgaaactttcgaaacttaaagaactaacttgagaattatgtcaaactaaaaggacaaaaagtggtatttg 8039652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 442 - 563
Target Start/End: Complemental strand, 39958798 - 39958677
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaact 541  Q
    ||||||| |||||||||||   || ||||| |||||||||||||  |  || || ||||||| || ||||||| ||||||||| |||||| |||||||||    
T  39958798 tttgaaacttaaaggattagaatgggaattctgtcaaactaaaatgacttaattgaaactttcgagacttaaatgactaacttaaaaattatgtcaaact 39958699  T
Q  542 aaaaggaccaaacatggtattt 563  Q
    |||||||||||| ||| |||||    
T  39958698 aaaaggaccaaaaatgatattt 39958677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 478 - 550
Target Start/End: Complemental strand, 1286505 - 1286433
Alignment:
Q  478 aactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggacc 550  Q
    ||||||||||| |||||| |||||||||||||||||| ||||||||| | |||| | ||||||||||||||||    
T  1286505 aactaaaagaacctatttgaaacttttgaaacttaaaagactaactttagaattctctcaaactaaaaggacc 1286433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 417 - 485
Target Start/End: Original strand, 21433323 - 21433391
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaa 485  Q
    |||| ||||| ||||||||||||| ||||||| |||||||||||||||| ||||| |||||||||||||    
T  21433323 aaacaaaaataacttatttgaaacttttgaaacttaaaggattaacttgggaattctgtcaaactaaaa 21433391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 501 - 549
Target Start/End: Original strand, 31893437 - 31893485
Alignment:
Q  501 ttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggac 549  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  31893437 ttttgaaacttaaaggactaacttgagaattttgtcaaactaaaaggac 31893485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 442 - 550
Target Start/End: Original strand, 31893438 - 31893537
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaact 541  Q
    ||||||| |||||||| ||||||||||||| |||||||||||||| |  ||         ||||||||||||||||||||||||| |||| |||||||||    
T  31893438 tttgaaacttaaaggactaacttgagaattttgtcaaactaaaaggactta---------tttgaaacttaaaggactaacttgagaattctgtcaaact 31893528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 286 - 373
Target Start/End: Complemental strand, 1348917 - 1348830
Alignment:
Q  286 atttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacat 373  Q
    |||||||  |||| || ||||| || |||||||||||||||||||||| ||| | |||||||||||||||| ||||||||| ||||||    
T  1348917 atttgtgaccattaaacgtaacgttatgacaccctggagcttttaaaaggcaacattttgatccaagtcaataatttaacgactacat 1348830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 399 - 553
Target Start/End: Complemental strand, 20183923 - 20183769
Alignment:
Q  399 aacagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaa 498  Q
    ||||| ||||| |||||| ||||||||||||||||||||||  ||||||| |||||||| ||||||| ||| | | | ||| | |||| ||||| || ||    
T  20183923 aacagtgaaataatttatcaactaaaatgacttatttgaaatttttgaaacttaaaggactaacttgggaactctattaaa-ttaaaggatctaattgaa 20183825  T
Q  499 acttttgaaacttaaaggactaacttgaaaattttgtcaaact-aaaaggaccaaa 553  Q
    |||||  ||| |||||| ||| | ||| ||||| ||||||||| ||||||||||||    
T  20183824 actttcaaaatttaaagaactgaattgtaaattctgtcaaactaaaaaggaccaaa 20183769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 300 - 375
Target Start/End: Original strand, 42990880 - 42990955
Alignment:
Q  300 aatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacatta 375  Q
    |||||| | |||| ||||||| ||| ||||||||| |||| ||||||||||||||||||| |||||||||||||||    
T  42990880 aatgtagcgttttaacacccttgagtttttaaaattcagcattttgatccaagtcaacaacttaacggctacatta 42990955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 490 - 548
Target Start/End: Original strand, 4187691 - 4187749
Alignment:
Q  490 ctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaagga 548  Q
    ||||||||||||||| ||| |||||||||||||||||||||| ||||||| ||||||||    
T  4187691 ctatttaaaacttttaaaatttaaaggactaacttgaaaattctgtcaaattaaaagga 4187749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 475 - 549
Target Start/End: Complemental strand, 21433282 - 21433208
Alignment:
Q  475 tcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggac 549  Q
    ||||||||||||||  ||||| |||||||||||||||||| ||||||||||  |||| | |||||||||||||||    
T  21433282 tcaaactaaaagaacttatttgaaacttttgaaacttaaatgactaacttgggaattctttcaaactaaaaggac 21433208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 459 - 545
Target Start/End: Original strand, 21433305 - 21433391
Alignment:
Q  459 taacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaa 545  Q
    ||||||| ||||| |||||||| |||| ||  ||||| ||||||||||||||||||||| |||||||  |||| |||||||||||||    
T  21433305 taacttgggaattctgtcaaacaaaaataacttatttgaaacttttgaaacttaaaggattaacttgggaattctgtcaaactaaaa 21433391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 309 - 373
Target Start/End: Complemental strand, 8039900 - 8039835
Alignment:
Q  309 ttttgacaccctg-gagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacat 373  Q
    ||||||||||||| |||||||||||| ||||| |||||||| |||||||||| |||||||||||||    
T  8039900 ttttgacaccctgcgagcttttaaaaggcagcattttgatcaaagtcaacaacttaacggctacat 8039835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 309 - 373
Target Start/End: Original strand, 5559499 - 5559563
Alignment:
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacat 373  Q
    ||||||||||||||||||||||||| ||||| |||||||| || ||||||| |||||| ||||||    
T  5559499 ttttgacaccctggagcttttaaaaggcagcattttgatcaaactcaacaacttaacgactacat 5559563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 506 - 550
Target Start/End: Original strand, 28256954 - 28256998
Alignment:
Q  506 aaacttaaaggactaacttgaaaattttgtcaaactaaaaggacc 550  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  28256954 aaacttaaaggactaacttgaaaattttgtcaaactaaaatgacc 28256998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 433 - 544
Target Start/End: Complemental strand, 4187626 - 4187515
Alignment:
Q  433 tttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattt 532  Q
    |||||||| ||||||| |||||| | ||||||| |||||||||||||| ||||| | ||| || |||||||  |||||||||||| ||| ||   ||||     
T  4187626 tttgaaacttttgaaacttaaagaactaacttgggaattatgtcaaacaaaaagtacctaattgaaactttctaaacttaaaggattaatttatgaattc 4187527  T
Q  533 tgtcaaactaaa 544  Q
    ||||||||||||    
T  4187526 tgtcaaactaaa 4187515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 413 - 524
Target Start/End: Original strand, 31175941 - 31176052
Alignment:
Q  413 ttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaactta 512  Q
    |||| |||||||| ||| | |||||||| ||||||| |||||||| |||||||  |||| |||||||||||||| | ||| || |||||||  ||| |||    
T  31175941 ttatcaactaaaaggacctctttgaaacttttgaaacttaaaggactaacttggaaattctgtcaaactaaaaggacctaattgaaactttcaaaaatta 31176040  T
Q  513 aaggactaactt 524  Q
    ||||| ||||||    
T  31176041 aaggattaactt 31176052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 497 - 567
Target Start/End: Complemental strand, 1441062 - 1440992
Alignment:
Q  497 aaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    ||||||||||||||||||  |||||||||  |||| |||||||||||||||| ||||  ||||||||||||    
T  1441062 aaacttttgaaacttaaaatactaacttgggaattctgtcaaactaaaaggatcaaatgtggtatttggcc 1440992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 454 - 564
Target Start/End: Complemental strand, 5075446 - 5075337
Alignment:
Q  454 aggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaa 553  Q
    |||| ||||||||||||| |||||||  ||| || || ||| ||| ||||| ||||||||||||||||||||| |  | |||||||||||||| | ||||    
T  5075446 aggactaacttgagaattctgtcaaataaaaggactcaattgaaa-cttttaaaacttaaaggactaacttgagagatctgtcaaactaaaagaatcaaa 5075348  T
Q  554 catggtatttg 564  Q
    |||| ||||||    
T  5075347 catgatatttg 5075337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 450 - 548
Target Start/End: Complemental strand, 19925267 - 19925170
Alignment:
Q  450 ttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaagga 548  Q
    |||||||| |||||||  |||| ||| ||||||||||   |||||| | | ||||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  19925267 ttaaaggactaacttggaaattctgttaaactaaaaggtcctatttgatatttttgaaacttaaaggactaa-ttggaaattgtgtcaaactaaaagga 19925170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 309 - 395
Target Start/End: Original strand, 20366408 - 20366494
Alignment:
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaattattaact 395  Q
    ||||||||||||||||||||||| |  ||  |||||||||||||||||||| |||| ||||||| ||  || | |||||||||||||    
T  20366408 ttttgacaccctggagcttttaacagacattgttttgatccaagtcaacaacttaatggctacagtagcattagttaattattaact 20366494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 491 - 553
Target Start/End: Complemental strand, 28104359 - 28104297
Alignment:
Q  491 tatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaa 553  Q
    |||||||||||||||||||||||| ||||| ||||  |||| || ||||||||||||||||||    
T  28104359 tatttaaaacttttgaaacttaaatgactaccttgtgaattatgccaaactaaaaggaccaaa 28104297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 417 - 486
Target Start/End: Original strand, 1441481 - 1441550
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaag 486  Q
    ||||||||||||| || ||||||| || ||||  ||||||| ||||||| ||||||||||||||||||||    
T  1441481 aaactaaaatgacctaattgaaactttcgaaacctaaaggactaacttgggaattatgtcaaactaaaag 1441550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 417 - 486
Target Start/End: Complemental strand, 8039739 - 8039670
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaag 486  Q
    ||||||||| ||| || ||||||| || |||| |||||| | ||||||||||||||||||||||||||||    
T  8039739 aaactaaaaggacctaattgaaactttcgaaacttaaagaactaacttgagaattatgtcaaactaaaag 8039670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 502 - 563
Target Start/End: Original strand, 36566526 - 36566587
Alignment:
Q  502 tttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtattt 563  Q
    ||||||||||||| |||||||||| ||||| |||||||||||| ||||||||  ||||||||    
T  36566526 tttgaaacttaaaagactaacttggaaattctgtcaaactaaagggaccaaaagtggtattt 36566587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 478 - 546
Target Start/End: Original strand, 6220365 - 6220432
Alignment:
Q  478 aactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaag 546  Q
    ||||||||||| ||||| ||||||||||||||||||| ||||||||||| |||| | | ||||||||||    
T  6220365 aactaaaagaacctattgaaaacttttgaaacttaaa-gactaacttgagaattctatgaaactaaaag 6220432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 431 - 563
Target Start/End: Complemental strand, 20101943 - 20101813
Alignment:
Q  431 tatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaat 530  Q
    ||||| |||| ||| ||| |||||||| |||||||| |||  |||| ||||||||| ||||| || ||||||| ||||||||||  |||||||||  |||    
T  20101943 tatttaaaacttttaaaacttaaaggactaacttgaaaatc-tgtcgaactaaaaggatctaattgaaactttcgaaacttaaaa-actaacttgggaat 20101846  T
Q  531 tttgtcaaactaaaaggaccaaacatggtattt 563  Q
    |  |||||||||||| || |||| |||||||||    
T  20101845 tcagtcaaactaaaatgatcaaaaatggtattt 20101813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 309 - 369
Target Start/End: Original strand, 31175825 - 31175885
Alignment:
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggct 369  Q
    |||||||| ||| |||||||||||||| ||| |||| |||||||||||||| |||||||||    
T  31175825 ttttgacatcctcgagcttttaaaatgaagcattttcatccaagtcaacaacttaacggct 31175885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 20366310 - 20366373
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtcttt 247  Q
    ||||||||| ||||  ||||||   ||||||||||| |||||||||||||||||||||||||||    
T  20366310 taatggtcacaaattatcatttgctgtgctagaaaggcaactatttacaacaacaaatgtcttt 20366373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 399 - 486
Target Start/End: Complemental strand, 28104391 - 28104304
Alignment:
Q  399 aacagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaag 486  Q
    ||||| ||||| |||||| |||||||| ||| ||||| |||| ||||||| ||||| || || |||| |||||||| |||||||||||    
T  28104391 aacagtgaaataatttatcaactaaaaagacatatttaaaacttttgaaacttaaatgactaccttgtgaattatgccaaactaaaag 28104304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 417 - 488
Target Start/End: Complemental strand, 31893326 - 31893255
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaa 488  Q
    ||||||||||||| || ||||||| || |||| |||||  | ||||||||||||| ||||||||||||||||    
T  31893326 aaactaaaatgacctaattgaaactttcgaaacttaaaaaactaacttgagaattctgtcaaactaaaagaa 31893255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 417 - 487
Target Start/End: Original strand, 1349200 - 1349270
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaaga 487  Q
    |||||||||||| |||||| |||| ||||||| ||||| || ||||||   ||||||||||||||||||||    
T  1349200 aaactaaaatgatttatttaaaacttttgaaacttaaaagactaacttagaaattatgtcaaactaaaaga 1349270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 242
Target Start/End: Complemental strand, 10620112 - 10620054
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatg 242  Q
    ||||||||| ||||| |||||||||||  ||||||| |||||||| |||||||||||||    
T  10620112 taatggtcacaaatgatcatttatagtcttagaaaggcaactattaacaacaacaaatg 10620054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 417 - 483
Target Start/End: Original strand, 29591105 - 29591171
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaa 483  Q
    ||||||||||||| || || |||| ||||||| |||||||| |||||||| |||||| |||||||||    
T  29591105 aaactaaaatgacctaattaaaacttttgaaacttaaaggactaacttgataattatatcaaactaa 29591171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 225
Target Start/End: Original strand, 1286631 - 1286672
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaact 225  Q
    ||||||||| ||||| ||||||||||||||||||||||||||    
T  1286631 taatggtcacaaatgttcatttatagtgctagaaagacaact 1286672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 417 - 486
Target Start/End: Original strand, 22876902 - 22876970
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaag 486  Q
    |||||||||||||||| ||||||| || |||| |||||  |||||||||  |||||||||||||||||||    
T  22876902 aaactaaaatgacttaattgaaactttcgaaacttaaa-aattaacttggaaattatgtcaaactaaaag 22876970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 450 - 563
Target Start/End: Original strand, 28256958 - 28257071
Alignment:
Q  450 ttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggac 549  Q
    |||||||| |||||||| |||| |||||||||||||  | ||| || ||| |||  |||||||||  |||||||| | |||| | |||||||||||||||    
T  28256958 ttaaaggactaacttgaaaattttgtcaaactaaaatgacctaattgaaattttcaaaacttaaaaaactaactttagaattatatcaaactaaaaggac 28257057  T
Q  550 caaacatggtattt 563  Q
     |||  ||||||||    
T  28257058 aaaaagtggtattt 28257071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 417 - 486
Target Start/End: Complemental strand, 39958763 - 39958694
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaag 486  Q
    |||||||||||||||| ||||||| || || | ||||| || |||||| | |||||||||||||||||||    
T  39958763 aaactaaaatgacttaattgaaactttcgagacttaaatgactaacttaaaaattatgtcaaactaaaag 39958694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 417 - 486
Target Start/End: Complemental strand, 40904767 - 40904698
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaag 486  Q
    ||||||||| ||| || ||||||| ||| ||| ||||| || |||||||||||||||||||||| |||||    
T  40904767 aaactaaaaggacctaattgaaacttttaaaacttaaaagactaacttgagaattatgtcaaaccaaaag 40904698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 309 - 365
Target Start/End: Complemental strand, 20184019 - 20183963
Alignment:
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaac 365  Q
    ||||||||||||  |||||||||||  || ||||||||||||||||||||| |||||    
T  20184019 ttttgacaccctcaagcttttaaaagacaacgttttgatccaagtcaacaacttaac 20183963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 309 - 365
Target Start/End: Original strand, 29590972 - 29591028
Alignment:
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaac 365  Q
    |||||||| |||||||||||||||| ||| | ||||||| ||||||||||| |||||    
T  29590972 ttttgacatcctggagcttttaaaaagcatcattttgattcaagtcaacaacttaac 29591028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 417 - 457
Target Start/End: Original strand, 42888993 - 42889033
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaagga 457  Q
    |||||||||||||||||||||||| ||||||| ||||||||    
T  42888993 aaactaaaatgacttatttgaaacttttgaaacttaaagga 42889033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 123
Target Start/End: Complemental strand, 1441430 - 1441399
Alignment:
Q  92 gataaactatttcactgttacccctgctgtca 123  Q
    ||||||||||||||||||||||||||||||||    
T  1441430 gataaactatttcactgttacccctgctgtca 1441399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 123
Target Start/End: Original strand, 27995197 - 27995228
Alignment:
Q  92 gataaactatttcactgttacccctgctgtca 123  Q
    ||||||||||||||||||||||||||||||||    
T  27995197 gataaactatttcactgttacccctgctgtca 27995228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 308 - 386
Target Start/End: Original strand, 28256817 - 28256894
Alignment:
Q  308 attttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaa 386  Q
    ||||||||||||| |||||||||||| ||||  ||||| || || |||||||||||||| |||||| || |||| ||||    
T  28256817 attttgacaccctagagcttttaaaa-gcagtattttgttctaaatcaacaatttaacgactacatcaacatcagttaa 28256894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #98
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 491 - 550
Target Start/End: Original strand, 29591057 - 29591118
Alignment:
Q  491 tatttaaaacttttgaaacttaaaggacta--acttgaaaattttgtcaaactaaaaggacc 550  Q
    ||||||||||||||||||||||||||| ||  |||||   ||||||||||||||||| ||||    
T  29591057 tatttaaaacttttgaaacttaaaggattataacttgcggattttgtcaaactaaaatgacc 29591118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #99
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 417 - 486
Target Start/End: Complemental strand, 1346556 - 1346487
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaag 486  Q
    ||||||||| || ||| ||||||| || |||| |||||| | |||||| |||||| ||||||||||||||    
T  1346556 aaactaaaaggatttaattgaaactttcgaaacttaaagcactaacttaagaattctgtcaaactaaaag 1346487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #100
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 497 - 546
Target Start/End: Complemental strand, 4187622 - 4187573
Alignment:
Q  497 aaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaag 546  Q
    ||||||||||||||||||| |||||||||  |||| |||||||| |||||    
T  4187622 aaacttttgaaacttaaagaactaacttgggaattatgtcaaacaaaaag 4187573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #101
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 421 - 490
Target Start/End: Complemental strand, 5075420 - 5075351
Alignment:
Q  421 taaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatc 490  Q
    ||||| |||| | ||||||| ||| ||| |||||||| ||||||||||  | ||||||||||||||||||    
T  5075420 taaaaggactcaattgaaacttttaaaacttaaaggactaacttgagagatctgtcaaactaaaagaatc 5075351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #102
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 417 - 486
Target Start/End: Original strand, 5559666 - 5559734
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaag 486  Q
    ||||||||| ||| || ||||||| ||| ||| |||||||| ||||||| ||||| ||||||||||||||    
T  5559666 aaactaaaaggacctaattgaaac-tttaaaacttaaaggactaacttgggaattttgtcaaactaaaag 5559734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #103
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 502 - 547
Target Start/End: Original strand, 10620239 - 10620284
Alignment:
Q  502 tttgaaacttaaaggactaacttgaaaattttgtcaaactaaaagg 547  Q
    |||||||||||||||||| ||||| ||||| ||| |||||||||||    
T  10620239 tttgaaacttaaaggacttacttggaaattctgttaaactaaaagg 10620284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #104
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 506 - 547
Target Start/End: Complemental strand, 19925271 - 19925230
Alignment:
Q  506 aaacttaaaggactaacttgaaaattttgtcaaactaaaagg 547  Q
    |||||||||||||||||||| ||||| ||| |||||||||||    
T  19925271 aaacttaaaggactaacttggaaattctgttaaactaaaagg 19925230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #105
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 478 - 547
Target Start/End: Original strand, 21413099 - 21413167
Alignment:
Q  478 aactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaagg 547  Q
    ||||||||| | |||||| ||||||||||||||||||  ||||||||  ||||| ||||||| |||||||    
T  21413099 aactaaaaggacctatttgaaacttttgaaacttaaa-aactaacttagaaattctgtcaaattaaaagg 21413167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #106
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 497 - 550
Target Start/End: Complemental strand, 33235150 - 33235097
Alignment:
Q  497 aaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggacc 550  Q
    |||||||||||| ||||||| ||||||||  |||| |||||||| |||||||||    
T  33235150 aaacttttgaaatttaaaggtctaacttgggaattctgtcaaaccaaaaggacc 33235097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 158; Significance: 1e-83; HSPs: 81)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 202 - 566
Target Start/End: Complemental strand, 25737462 - 25737090
Alignment:
Q  202 atttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactgatatttgtgttcattgaa 301  Q
    ||||||||||| ||||||||||||||||||| ||||||||   ||||||||||||||| ||||||||||||||| |||| |||| ||||||  |||| ||    
T  25737462 atttatagtgccagaaagacaactatttacaccaacaaatacatttctagcactattaaacgacatttatagtgctaaattgatgtttgtgaccattaaa 25737363  T
Q  302 tgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaattattaactcacaac 401  Q
      |||| ||||||||||| | | ||||||||||||| |||||| |||||| | ||||| ||||||| ||||| || |||||||||||||||||| ||| |    
T  25737362 cttaacgttttgacaccc-gaaacttttaaaatgcatcgtttttatccaatttaacaacttaacggttacatcaacatcaattaattattaactgacagc 25737264  T
Q  402 aga---------gaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatcta 492  Q
    ||          |||||  ||||| || ||||||||| ||| |||||| |||||||||||||||| ||||||  |||||  ||||||||||||| |||||    
T  25737263 aggtgtaacgatgaaatagtttatcaagtaaaatgacatatgtgaaacttttgaaatttaaaggactaacttaggaattcggtcaaactaaaaggatcta 25737164  T
Q  493 tttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggc 566  Q
    ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  25737163 tttgaaacttttgaaacttaaaggactaacttgaaaattatgtcaaactaaaaggaccaaatatggtatttggc 25737090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 184 - 564
Target Start/End: Complemental strand, 23553739 - 23553343
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattag------acgacatttatagtgat 277  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |       ||||  ||||||||| |    
T  23553739 taatggtcacaaatgatcatttatagtgctagaaagacaactatttacaacaagaaatgtctttctagcactataaacatcaaacgatgtttatagtgct 23553640  T
Q  278 aaactgat-atttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaa 376  Q
    | | |||| |||||||   ||| || ||||| |||||||||||||||||||||||||  |  ||||||||||||||||||||||||||||||||||| ||    
T  23553639 agaatgatcatttgtgacgattaaacgtaacgttttgacaccctggagcttttaaaagacgacgttttgatccaagtcaacaatttaacggctacatcaa 23553540  T
Q  377 tatcaattaattattaactcacaacagag---------aaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgag 467  Q
     |||| ||||||||||||| ||| ||| |         ||||  ||||| |||||||||||| |||||||||| ||||||||||||| ||  ||||||||    
T  23553539 catcagttaattattaactgacagcaggggtaacggtgaaatagtttatcaactaaaatgacctatttgaaacttttgaaatttaaaagaccaacttgag 23553440  T
Q  468 aattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttg 564  Q
    |||| |||||||||||||| | ||| || ||||||| |||||||||||||  || |||| |||| |||||||||||||||| |||||||||||||||    
T  23553439 aattttgtcaaactaaaaggacctaattgaaactttcgaaacttaaaggatcaagttgagaattctgtcaaactaaaaggatcaaacatggtatttg 23553343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 184 - 556
Target Start/End: Original strand, 8714108 - 8714490
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactg 283  Q
    ||||||||| ||||| |||||||||||||||||||  || |||||||||||||||||||| ||| | ||||||||| |||||||||||| || || | ||    
T  8714108 taatggtcacaaatgatcatttatagtgctagaaaagcagctatttacaacaacaaatgtttttatggcactattaaacgacatttataatgctagaatg 8714207  T
Q  284 atatttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaat 383  Q
    |||||| ||  |||| || ||||| |||||  |||||||||||||||||| |||||||||||||||||||||| || ||||||||||||| || ||||||    
T  8714208 atatttttgaccattaaacgtaacgttttgtgaccctggagcttttaaaaggcagcgttttgatccaagtcaataacttaacggctacatcaacatcaat 8714307  T
Q  384 taattattaactcac----------aacagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattat 473  Q
    |||||||| ||| ||          ||||| |||||  ||||| |||||||| ||| ||||| |||| || |||| |||||  | ||||||| ||||| |    
T  8714308 taattatttactgactagcagaggtaacagtgaaatagtttatcaactaaaaagacctatttaaaactttagaaacttaaaaaactaacttgcgaattct 8714407  T
Q  474 gtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacat 556  Q
     ||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||| | |||||||||||||| |||||||    
T  8714408 atcaaactaaaagaatctatttgaaacttttgaatcttaaaggactaacttggaaattctatcaaactaaaaggatcaaacat 8714490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 184 - 563
Target Start/End: Original strand, 30576414 - 30576803
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactg 283  Q
    ||||||||| ||||| ||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| || | ||    
T  30576414 taatggtcacaaatgatcagttatagtgctataaagacaactatttacaacaacaaatgtctttatagcactattaaacgacatttatagtgctagaatg 30576513  T
Q  284 at-atttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaa 382  Q
    || || ||||   ||| || ||||| ||||||||||||||||||||||||| |||  |||||||||||||||||||| |||||||||||||  | ||||     
T  30576514 atcatctgtgacgattaaacgtaacgttttgacaccctggagcttttaaaaggcaatgttttgatccaagtcaacaacttaacggctacatcgacatcag 30576613  T
Q  383 ttaattattaactcacaacagag---------aaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattat 473  Q
    ||||      ||||||||||| |         ||||  ||||| |||||||||||| ||||| |||| ||||||| |||||||| ||||||| ||||| |    
T  30576614 ttaaacggagactcacaacaggggtaacggtgaaatagtttatcaactaaaatgacatatttaaaacttttgaaacttaaaggactaacttgggaattct 30576713  T
Q  474 gtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtattt 563  Q
    ||||||||||||| | ||| || |||||||||||||||| | |||||||||||||||| |||||||||||||||| ||||| | ||||||    
T  30576714 gtcaaactaaaaggacctaattgaaacttttgaaacttagaagactaacttgaaaattctgtcaaactaaaaggatcaaacgtagtattt 30576803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 184 - 567
Target Start/End: Original strand, 39701146 - 39701540
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactg 283  Q
    |||||||||||| || ||||||||| |||||||||||||| | |||||||||| ||||| |||||||||||||||| ||||||||||||||| || | ||    
T  39701146 taatggtcataagtgatcatttataatgctagaaagacaattgtttacaacaataaatgcctttctagcactattaaacgacatttatagtgctagaatg 39701245  T
Q  284 at-atttgtgttcattgaatgtaacattttgacaccc-tggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatca 381  Q
    || |||||||   ||| || ||||||||||||||||| | ||||||||||||  |||| ||||||||||||||||||| |||||| ||| ||||  ||||    
T  39701246 ataatttgtgacgattaaacgtaacattttgacacccttagagcttttaaaagacagcattttgatccaagtcaacaacttaacgtctaaattagcatca 39701345  T
Q  382 attaattattaactca---------caacagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaatta 472  Q
     ||||||||||||| |          ||||| ||| |  ||||| |||||||| ||| |||||||||  ||||||| ||||| || |||  || |||||     
T  39701346 gttaattattaactgatagcaggggtaacagtgaagtagtttatcaactaaaaggacctatttgaaagttttgaaacttaaatgactaatctgggaattc 39701445  T
Q  473 tgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    | |||||||||||| |  || || ||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||| ||||||||||||    
T  39701446 tatcaaactaaaaggacttaattgaaacttttgaaacttaaagaactaacttgagaattctgtcaaactaaaaggaccaaacgtggtatttggcc 39701540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 210 - 538
Target Start/End: Complemental strand, 6236082 - 6235747
Alignment:
Q  210 tgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactgat-atttgtgttcattgaatgtaaca 308  Q
    ||||||| || |||||||||||||||||||||| |||||||||||||||| | |||||||||| || || | |||| |||||||  |||| || ||||||    
T  6236082 tgctagataggcaactatttacaacaacaaatgcctttctagcactattaaatgacatttataatgctagaatgatcatttgtgaccattaaacgtaaca 6235983  T
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaattattaactcacaacaga---- 404  Q
    |||||| ||||| |||||||||||||||| ||||||||||||||||||||| ||||  ||||||| |  |||||||||||||||||| ||| ||||        
T  6235982 ttttgataccctagagcttttaaaatgcaacgttttgatccaagtcaacaacttaatagctacatcagcatcaattaattattaactgacagcagaggta 6235883  T
Q  405 -----gaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaac-ttgagaattatgtcaaactaaaagaatctatttaaa 498  Q
         |||||  ||||| |||||||||    |||||||||| ||||||||||||||||||||| ||  ||||| |||||||||||||  ||||||||||     
T  6235882 aaggtgaaatagtttatcaactaaaatagtctatttgaaacttttgaaatttaaaggattaactttcggaattctgtcaaactaaaatgatctatttaa- 6235784  T
Q  499 acttttgaaacttaaaggactaacttgaaaattttgtcaa 538  Q
       |||||||||||||| |||||||||| |||||||||||    
T  6235783 ---tttgaaacttaaagaactaacttgagaattttgtcaa 6235747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 188 - 566
Target Start/End: Original strand, 9276749 - 9277129
Alignment:
Q  188 ggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactgat-a 286  Q
    ||||| ||||| ||||||||| ||||||||||||| |||||||||| |||||||| ||||||| |||||||| |||| |||||||||  || | |||| |    
T  9276749 ggtcacaaatgatcatttataatgctagaaagacatctatttacaataacaaatgcctttctaacactattaaacgatatttatagtcctagaatgatca 9276848  T
Q  287 tttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaa 386  Q
    |||||| | ||| || ||||| |||| |||||||||||||||||||| | ||||||||| ||||||||||||| |||| ||||||      |||||||||    
T  9276849 tttgtgatgattaaacgtaacgttttaacaccctggagcttttaaaaggtagcgttttgctccaagtcaacaacttaatggctac------atcaattaa 9276942  T
Q  387 ttattaactcac---------aacagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtca 477  Q
    ||||||||| ||         ||| | |||||  ||||| |||||||| ||| |||||||||| ||||||| |||||||| |||||||  |||| | |||    
T  9276943 ttattaactgacagcaagggtaacggtgaaatagtttatcaactaaaa-gacctatttgaaacttttgaaacttaaaggactaacttggaaattctatca 9277041  T
Q  478 aactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggc 566  Q
    ||||||||| ||||| || ||||||| |||||||||| ||||||||||  |||| ||||||||||||| || | ||| |||||||||||    
T  9277042 aactaaaaggatctaattgaaactttcgaaacttaaaagactaacttgggaattctgtcaaactaaaatgatc-aacgtggtatttggc 9277129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 309 - 568
Target Start/End: Complemental strand, 8714098 - 8713830
Alignment:
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaattattaactcacaaca------ 402  Q
    |||||| |||||||||||||||||| | ||| ||||||| ||||||||||| |||||||||||||||  ||||  ||| |  | |||  |||||          
T  8714098 ttttgataccctggagcttttaaaaagtagcattttgattcaagtcaacaacttaacggctacattagcatcagctaaatggttactgccaacatgggta 8713999  T
Q  403 ---gagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaa 499  Q
       | ||||  |||||| |||||||||||  |||||||||  ||||||| ||||| || ||||||| ||||| ||||||||||||||||| || || |||    
T  8713998 acggtgaaacaatttatcaactaaaatgatctatttgaaatttttgaaacttaaaagactaacttgtgaattttgtcaaactaaaagaatttaattgaaa 8713899  T
Q  500 cttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggccc 568  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||||||||  |||||||| ||||    
T  8713898 cttttgaaacttaaaggactaacttgagaattatgtcaaactaaaaggaccaaaagtggtatttagccc 8713830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 412 - 567
Target Start/End: Original strand, 9770778 - 9770933
Alignment:
Q  412 tttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaactt 511  Q
    ||||| |||||||| ||| |||||||||| ||||||| |||||||| ||||||| ||||| |||||||||||||  |  || || ||||||| |||||||    
T  9770778 tttatcaactaaaaggacctatttgaaacttttgaaaattaaaggactaacttgggaattctgtcaaactaaaatgacttaattgaaactttcgaaactt 9770877  T
Q  512 aaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    ||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||    
T  9770878 aaaggactaacttgagaattttgtcaaactaaaaggaccaaaagtggtatttggcc 9770933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 184 - 553
Target Start/End: Complemental strand, 4614118 - 4613739
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactg 283  Q
    ||||||||| ||||| ||||||||| || | ||||||||  ||||| ||||||||||||  ||||||||||||||| | |||| || ||||| || | ||    
T  4614118 taatggtcacaaatgatcatttataatgttggaaagacaggtatttgcaacaacaaatgcatttctagcactattaaatgacaattttagtgctagaatg 4614019  T
Q  284 at-atttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaa 382  Q
    || |||||||   ||| ||   ||| |||||||||| || | |||||||||||||   ||||||| ||||||||||| ||||||||| ||| |  ||||     
T  4614018 atcatttgtgacgattaaacacaacgttttgacaccttgtaacttttaaaatgcaatattttgattcaagtcaacaacttaacggctgcatcagcatcag 4613919  T
Q  383 ttaattattaactcacaacagag---------aaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattat 473  Q
    ||||||||||||| ||  ||| |         ||||  ||||||||||||||  |  |||||||||| ||||||| |||||||| ||||| || |||| |    
T  4613918 ttaattattaactgacggcagggttagcggtgaaatagtttataaactaaaagaatctatttgaaacttttgaaacttaaaggactaactcgaaaatttt 4613819  T
Q  474 gtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaa 553  Q
    ||||||||||||| |  || || |||||||  ||| |||||||| ||||||||||||| | |||||||||||||||||||    
T  4613818 gtcaaactaaaaggacttaattgaaactttcaaaatttaaaggattaacttgaaaattctttcaaactaaaaggaccaaa 4613739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 303 - 564
Target Start/End: Original strand, 31169361 - 31169628
Alignment:
Q  303 gtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaattattaactcacaaca 402  Q
    ||||||||||||||||   ||||||||||||   | ||||||||||||||||||||| |||| ||  |||| |  |||| ||||||||||||| ||| ||    
T  31169361 gtaacattttgacacct--gagcttttaaaagataacgttttgatccaagtcaacaacttaatggtcacatcagcatcagttaattattaactgacatca 31169458  T
Q  403 ---------gagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctat 493  Q
             | |||||  ||||| |||||||||||| |||||||||| ||| ||| |||||||| ||| |||||||||  ||||||||||||  ||||||    
T  31169459 cgggtaacggtgaaatattttatcaactaaaatgacatatttgaaacttttaaaacttaaaggactaatttgagaatttcgtcaaactaaaatgatctat 31169558  T
Q  494 ttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttg 564  Q
    || |||| ||| ||||||||||||||||||||| |||||||||||||||||| |||||||| || ||||||    
T  31169559 ttgaaac-tttaaaacttaaaggactaacttgagaattttgtcaaactaaaatgaccaaacgtgatatttg 31169628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 412 - 550
Target Start/End: Complemental strand, 39701025 - 39700887
Alignment:
Q  412 tttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaactt 511  Q
    ||||| |||||||||||| |||||||||| ||||||| |||||||||||||||  ||||| |||||||||||||| |  || || |||||||| ||||||    
T  39701025 tttatcaactaaaatgacatatttgaaacttttgaaacttaaaggattaacttaggaattttgtcaaactaaaaggacataattgaaacttttaaaactt 39700926  T
Q  512 aaaggactaacttgaaaattttgtcaaactaaaaggacc 550  Q
    ||||||||||||| | |||||||||||||||||||||||    
T  39700925 aaaggactaacttaagaattttgtcaaactaaaaggacc 39700887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 184 - 395
Target Start/End: Original strand, 16197290 - 16197502
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactg 283  Q
    ||||||||| ||||| |||||||||||| | | ||| ||||| |||||||||| |||||  ||||||||||||||| ||||||||||||||| || | ||    
T  16197290 taatggtcacaaatgatcatttatagtgattgcaaggcaactttttacaacaataaatgcatttctagcactattaaacgacatttatagtgctagaatg 16197389  T
Q  284 at-atttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaa 382  Q
    || |||||||  |||| || ||||| |||||||||| || | ||||||||| ||| |||||||||| |||||||||| |||||  |||||  || ||||     
T  16197390 atcatttgtgaccattaaacgtaacgttttgacaccttgaaacttttaaaaggcaacgttttgatctaagtcaacaacttaacaactacaccaacatcag 16197489  T
Q  383 ttaattattaact 395  Q
    |||||||||||||    
T  16197490 ttaattattaact 16197502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 412 - 552
Target Start/End: Complemental strand, 36360041 - 36359901
Alignment:
Q  412 tttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaactt 511  Q
    ||||| |||||||||||| |||||||||| ||| ||| |||||||| ||||||| ||||| |||||||||||||  | ||| || ||||||| |||||||    
T  36360041 tttatcaactaaaatgacctatttgaaacttttaaaacttaaaggactaacttgggaattctgtcaaactaaaaatacctaattgaaactttcgaaactt 36359942  T
Q  512 aaaggactaacttgaaaattttgtcaaactaaaaggaccaa 552  Q
    |||||||||||||| ||||| ||||||||||||||||||||    
T  36359941 aaaggactaacttggaaattctgtcaaactaaaaggaccaa 36359901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 309 - 550
Target Start/End: Original strand, 40553128 - 40553369
Alignment:
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaattattaactcacaaca------ 402  Q
    |||||||||||||||||||||||||  || | ||||||| ||||||||||| |||||||||| || || |||||||||||||||||| ||| ||          
T  40553128 ttttgacaccctggagcttttaaaagacaacattttgatacaagtcaacaacttaacggctatatcaacatcaattaattattaactgacaccaagggta 40553227  T
Q  403 ---gagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaa 499  Q
       | |||||  ||||| || ||||||||  ||||||||||         ||||| |||||||||||||||| |||||||||||||| | | | || |||    
T  40553228 acggtgaaatagtttatcaagtaaaatgatctatttgaaac---------ttaaatgattaacttgagaattctgtcaaactaaaaggaccaaattgaaa 40553318  T
Q  500 cttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggacc 550  Q
    ||||||||||||||| |||||||||  ||||||||||||||||||||||||    
T  40553319 cttttgaaacttaaaagactaacttagaaattttgtcaaactaaaaggacc 40553369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 225 - 359
Target Start/End: Complemental strand, 44041099 - 44040964
Alignment:
Q  225 tatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactga-tatttgtgttcattgaatgtaacattttgacaccctgga 323  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||||||| || | ||| |||||||   |||| ||||||||||||||||||| ||||    
T  44041099 tatttacagcaacaaatgtctttctagcactattaaacgacatttatagtgctagaatgactatttgtcaccattaaatgtaacattttgacaccttgga 44041000  T
Q  324 gcttttaaaatgcagcgttttgatccaagtcaacaa 359  Q
    |||||||||| ||| ||||||||| ||| |||||||    
T  44040999 gcttttaaaaggcaacgttttgatacaactcaacaa 44040964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 405 - 567
Target Start/End: Complemental strand, 16197176 - 16197014
Alignment:
Q  405 gaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaactttt 504  Q
    ||||| |||||| |||||||| ||| ||||||| || ||||||| ||||| |||||||||| ||||| |||||||||||||| |  || || |||||||     
T  16197176 gaaataatttattaactaaaaggacctatttgatacttttgaaacttaaatgattaacttgggaattctgtcaaactaaaaggacataattgaaactttc 16197077  T
Q  505 gaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    ||||||||| |||||||||||| |||| |||||||| ||||||||||||  | ||||||||||    
T  16197076 gaaacttaatggactaacttgataattctgtcaaacgaaaaggaccaaaagtagtatttggcc 16197014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 399 - 548
Target Start/End: Original strand, 25730102 - 25730252
Alignment:
Q  399 aacagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatct-atttaa 497  Q
    ||||| |||||  ||||| |||||||||||| |||||||||| |||||||||||||||| ||||||||||||| ||||||| |||||  | || |||| |    
T  25730102 aacagtgaaatagtttatcaactaaaatgacatatttgaaacttttgaaatttaaaggactaacttgagaattctgtcaaattaaaatgacctaatttga 25730201  T
Q  498 aacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaagga 548  Q
    ||||||  |||||||||||||||||||| ||||| | ||||||||||||||    
T  25730202 aactttcaaaacttaaaggactaacttggaaattctatcaaactaaaagga 25730252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 405 - 567
Target Start/End: Original strand, 29794243 - 29794405
Alignment:
Q  405 gaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaactttt 504  Q
    ||||| |||||| |||||||| ||  |||||||||| ||||||| ||||| || |||||||  ||||||||||||||||||| | ||| | ||||||||     
T  29794243 gaaataatttatcaactaaaaggatctatttgaaacttttgaaacttaaaagactaacttggaaattatgtcaaactaaaaggacctaatgaaaactttc 29794342  T
Q  505 gaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    |||| ||||||||||||||||  |||| ||||||||||||| ||||||| ||| |||||||||    
T  29794343 gaaatttaaaggactaacttgggaattctgtcaaactaaaatgaccaaaaatgatatttggcc 29794405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 412 - 549
Target Start/End: Original strand, 44041280 - 44041417
Alignment:
Q  412 tttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaactt 511  Q
    ||||| ||||||||||||||||||||||  ||||||| || || || ||||||  ||||| |||||||||||||| |  || || |||||||  ||||||    
T  44041280 tttatcaactaaaatgacttatttgaaatttttgaaactttaaagactaacttaggaattctgtcaaactaaaaggacataattgaaactttcaaaactt 44041379  T
Q  512 aaaggactaacttgaaaattttgtcaaactaaaaggac 549  Q
    ||||||||||||||||||||||||||||||||||||||    
T  44041380 aaaggactaacttgaaaattttgtcaaactaaaaggac 44041417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 399 - 546
Target Start/End: Original strand, 25737588 - 25737736
Alignment:
Q  399 aacagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatct-atttaa 497  Q
    ||||| |||||  ||||| |||||||||||  |||||||||| |||||||||||||||| ||||||||||||| ||||||| |||||  | || |||| |    
T  25737588 aacagtgaaatagtttatcaactaaaatgaaatatttgaaacttttgaaatttaaaggactaacttgagaattctgtcaaattaaaaagacctaatttga 25737687  T
Q  498 aacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaag 546  Q
    ||||||  |||||||||||||||||||| ||||| | ||||||||||||    
T  25737688 aactttcaaaacttaaaggactaacttggaaattctatcaaactaaaag 25737736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 433 - 563
Target Start/End: Original strand, 45017934 - 45018062
Alignment:
Q  433 tttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattt 532  Q
    |||||||  ||||||| |||||||| ||||||| ||| | |||||||||||||| | ||| |||||||||| ||||||||||||||||||||||| ||||    
T  45017934 tttgaaatttttgaaacttaaaggactaacttg-gaact-tgtcaaactaaaaggacctaattaaaactttcgaaacttaaaggactaacttgaagattt 45018031  T
Q  533 tgtcaaactaaaaggaccaaacatggtattt 563  Q
    ||||||||||||||||| |||  ||||||||    
T  45018032 tgtcaaactaaaaggactaaaagtggtattt 45018062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 460 - 567
Target Start/End: Original strand, 29792558 - 29792665
Alignment:
Q  460 aacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggt 559  Q
    ||||||||||||||||||||||||||| ||||| |  ||||||| |||| |||||||||||| |||  |||| ||||||||||||||||| ||| |||||    
T  29792558 aacttgagaattatgtcaaactaaaaggatctaatagaaactttcgaaatttaaaggactaatttgggaattctgtcaaactaaaaggactaaaaatggt 29792657  T
Q  560 atttggcc 567  Q
    ||||||||    
T  29792658 atttggcc 29792665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 433 - 567
Target Start/End: Original strand, 36360088 - 36360222
Alignment:
Q  433 tttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattt 532  Q
    |||||||| ||||||| |||||||| |||||||  |||| ||||||| |||||  |  ||||| ||||||| |||||||||| |||||||||| |||||     
T  36360088 tttgaaacttttgaaacttaaaggactaacttggcaattttgtcaaattaaaaagacttatttgaaactttcgaaacttaaaagactaacttggaaattc 36360187  T
Q  533 tgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    ||||||||||||| |||||||  ||||||||||||    
T  36360188 tgtcaaactaaaatgaccaaaattggtatttggcc 36360222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 442 - 550
Target Start/End: Complemental strand, 43423028 - 43422920
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaact 541  Q
    |||||||||||||||| |||||||  |||| |||||||||||||  | |||||| |||||||||||||||||||||||||||||  |||||||  ||| |    
T  43423028 tttgaaatttaaaggactaacttggaaattttgtcaaactaaaatgacctatttgaaacttttgaaacttaaaggactaacttgggaattttgctaaaat 43422929  T
Q  542 aaaaggacc 550  Q
    |||||||||    
T  43422928 aaaaggacc 43422920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 417 - 553
Target Start/End: Original strand, 43423090 - 43423225
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaagg 516  Q
    ||||||||||||| |||||||||| ||||||| |||||||| ||| ||||||||| | | ||||||||||| | || || ||||||| ||||||||||      
T  43423090 aaactaaaatgacctatttgaaacttttgaaacttaaaggagtaaattgagaattctatgaaactaaaagact-taattgaaactttcgaaacttaaata 43423188  T
Q  517 actaacttgaaaattttgtcaaactaaaaggaccaaa 553  Q
    ||||||||   |||| |||||||||||||||||||||    
T  43423189 actaacttaggaattatgtcaaactaaaaggaccaaa 43423225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 442 - 567
Target Start/End: Original strand, 14871369 - 14871496
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaa-ctaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaac 540  Q
    ||||||| |||||||| ||| ||||||||||||||||| ||||||||| ||| || ||||||| |||||||||| |||||||||   |||| ||||||||    
T  14871369 tttgaaacttaaaggactaatttgagaattatgtcaaaactaaaagaacctaattgaaactttcgaaacttaaaagactaacttaggaattctgtcaaac 14871468  T
Q  541 taaaaggaccaaaca-tggtatttggcc 567  Q
    | ||||||||||| | ||||||||||||    
T  14871469 ttaaaggaccaaaaagtggtatttggcc 14871496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 412 - 567
Target Start/End: Complemental strand, 45017887 - 45017732
Alignment:
Q  412 tttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaactt 511  Q
    ||||| || |||||||||||||||||||  ||||||  |||||||| ||| ||| ||||| ||| |||||||||  |  || || ||||||| |||||||    
T  45017887 tttatcaattaaaatgacttatttgaaatttttgaatcttaaaggactaatttgggaattctgttaaactaaaatgacataattgaaactttcgaaactt 45017788  T
Q  512 aaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    ||||||||||||||  |||| | |||||||||||||||||||  | ||||||||||    
T  45017787 aaaggactaacttgggaattctatcaaactaaaaggaccaaaagtagtatttggcc 45017732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 478 - 548
Target Start/End: Complemental strand, 5358717 - 5358647
Alignment:
Q  478 aactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaagga 548  Q
    ||||||||| | |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  5358717 aactaaaaggacctatttaaaacttttgaaacttgaaggactaacttgaaaattctgtcaaactaaaagga 5358647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 417 - 563
Target Start/End: Complemental strand, 43422993 - 43422847
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaagg 516  Q
    ||||||||||||| |||||||||| ||||||| |||||||| ||||||| ||||| ||  ||| |||||| | ||| || |||||||  |||||||||||    
T  43422993 aaactaaaatgacctatttgaaacttttgaaacttaaaggactaacttgggaattttgctaaaataaaaggacctaattgaaactttcaaaacttaaagg 43422894  T
Q  517 actaacttgaaaattttgtcaaactaaaaggaccaaacatggtattt 563  Q
    ||||| |||| |||| | |||||||||||| | ||||  ||||||||    
T  43422893 actaatttgagaattatatcaaactaaaagaatcaaaagtggtattt 43422847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 491 - 567
Target Start/End: Original strand, 13771878 - 13771954
Alignment:
Q  491 tatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    ||||| |||||||||||||||||||||||||||||  |||| ||||||||||||| ||||||| |||||||||||||    
T  13771878 tatttgaaacttttgaaacttaaaggactaacttgggaattatgtcaaactaaaatgaccaaaaatggtatttggcc 13771954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 412 - 564
Target Start/End: Original strand, 16208682 - 16208834
Alignment:
Q  412 tttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaactt 511  Q
    ||||| |||||||| ||| |||||||||| ||||||| | |||||| |||||||| |||| | | |||||||||  |||||||| |||  | | ||||||    
T  16208682 tttatcaactaaaaggacatatttgaaacttttgaaactcaaaggactaacttgaaaattctataaaactaaaatgatctatttgaaatctataaaactt 16208781  T
Q  512 aaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttg 564  Q
    |||| |||||||||| |||| ||||||||||||| || ||| | |||||||||    
T  16208782 aaagaactaacttgagaattctgtcaaactaaaaagatcaatcgtggtatttg 16208834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 478 - 545
Target Start/End: Complemental strand, 13771492 - 13771425
Alignment:
Q  478 aactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaa 545  Q
    |||||||||||||||||| |||||||| ||||||||| |||||||||||||||| |||||||||||||    
T  13771492 aactaaaagaatctatttgaaacttttaaaacttaaatgactaacttgaaaattctgtcaaactaaaa 13771425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 309 - 564
Target Start/End: Complemental strand, 40553014 - 40552750
Alignment:
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaattattaact-----cac----a 399  Q
    |||||||| |||||||||||||||||  ||  |||||||| || | |||||||||||||||| || |  ||||||||||||||||||     ||     |    
T  40553014 ttttgacaacctggagcttttaaaatatagtattttgatcgaaattaacaatttaacggctaaatcagcatcaattaattattaactggtagcaggggta 40552915  T
Q  400 acagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaa 499  Q
    |||| |||||  ||||| || | |||  || |||||||||  ||||||||||||| |  |||||||| |||| ||||||||||||| |   || || |||    
T  40552914 acagtgaaatattttatcaatttaaagaacctatttgaaatttttgaaatttaaatggctaacttgaaaattttgtcaaactaaaatatcttaattgaaa 40552815  T
Q  500 cttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttg 564  Q
    ||||  ||| ||||| || ||||||||||||| ||||||||||||| ||| |||| |||||||||    
T  40552814 ctttcaaaatttaaatgattaacttgaaaattctgtcaaactaaaacgacgaaacgtggtatttg 40552750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 399 - 485
Target Start/End: Original strand, 13771846 - 13771932
Alignment:
Q  399 aacagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaa 485  Q
    ||||| |||||| ||||| || ||||||||| |||||||||| ||||||| |||||||| ||||||| |||||||||||||||||||    
T  13771846 aacagtgaaatggtttatcaaataaaatgacatatttgaaacttttgaaacttaaaggactaacttgggaattatgtcaaactaaaa 13771932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 202 - 280
Target Start/End: Complemental strand, 25729976 - 25729898
Alignment:
Q  202 atttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaa 280  Q
    ||||||||||| ||||||||||||||||||| ||||||||   ||||||||||||||| ||||||||||||||| ||||    
T  25729976 atttatagtgccagaaagacaactatttacaccaacaaatacatttctagcactattaaacgacatttatagtgctaaa 25729898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 412 - 486
Target Start/End: Original strand, 35434322 - 35434396
Alignment:
Q  412 tttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaag 486  Q
    ||||| |||||||||||| |||||||||| ||||||| |||||||||||||||  ||||||||||||||||||||    
T  35434322 tttatcaactaaaatgacatatttgaaacttttgaaacttaaaggattaacttaggaattatgtcaaactaaaag 35434396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 184 - 274
Target Start/End: Complemental strand, 40553118 - 40553028
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagt 274  Q
    ||||||||| ||||  ||||||||| || ||||||| |||||||||||||||||||||| |||||||||||||||| | ||||||| ||||    
T  40553118 taatggtcacaaattatcatttatattgttagaaaggcaactatttacaacaacaaatgcctttctagcactattaaatgacatttgtagt 40553028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 399 - 567
Target Start/End: Complemental strand, 9276636 - 9276467
Alignment:
Q  399 aacagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaa 498  Q
    ||||| |||||  ||||| |||||||| ||| |||||||||| ||| ||| ||||  || ||||||||||||| |||||||||| ||  | ||| || ||    
T  9276636 aacagtgaaatagtttatcaactaaaaggacctatttgaaacttttaaaacttaactgactaacttgagaattctgtcaaactataaagacctaattgaa 9276537  T
Q  499 acttttgaaactt-aaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    |||||  |||||| |||| ||||  |||| ||||||||||||||||||||||||||  || |||||||||    
T  9276536 actttcaaaacttaaaagaactattttgagaattttgtcaaactaaaaggaccaaaagtgatatttggcc 9276467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 417 - 553
Target Start/End: Complemental strand, 39700960 - 39700823
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaagg 516  Q
    ||||||||| ||| || ||||||| ||| ||| |||||||| |||||| |||||| |||||||||||||| | ||| || |||||||  ||||||||| |    
T  39700960 aaactaaaaggacataattgaaacttttaaaacttaaaggactaacttaagaattttgtcaaactaaaaggacctaattgaaactttcaaaacttaaaag 39700861  T
Q  517 actaacttgaaaattttgtc-aaactaaaaggaccaaa 553  Q
    |||||| | | ||||||||| |||||||||||| ||||    
T  39700860 actaacataagaattttgtcaaaactaaaaggagcaaa 39700823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 286 - 394
Target Start/End: Complemental strand, 14871188 - 14871080
Alignment:
Q  286 atttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaatta 385  Q
    |||||||  |||| || ||||| ||||||||||||| |||||||||||| || ||||||||||||||||||||| ||||| ||| ||| |  |||| |||    
T  14871188 atttgtgaccattaaacgtaacgttttgacaccctgaagcttttaaaatccaacgttttgatccaagtcaacaacttaacagctgcatcagcatcactta 14871089  T
Q  386 attattaac 394  Q
    |||||||||    
T  14871088 attattaac 14871080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 399 - 546
Target Start/End: Original strand, 23553847 - 23553994
Alignment:
Q  399 aacagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaa 498  Q
    ||||| ||||| |||||| |||||| ||||  |||||||||| ||||||| || | | | ||||||||||||| | |||||||||||  |  || |||||    
T  23553847 aacagtgaaataatttattaactaacatgatctatttgaaacttttgaaacttgaggaactaacttgagaattctatcaaactaaaatgacttaattaaa 23553946  T
Q  499 acttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaag 546  Q
    || || |||||||||| ||||||||| | |||| ||||||||||||||    
T  23553947 acattcgaaacttaaaagactaactttagaattctgtcaaactaaaag 23553994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 473 - 564
Target Start/End: Original strand, 36314700 - 36314791
Alignment:
Q  473 tgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttg 564  Q
    |||||||||||||| |  || || ||||||| |||| ||||| ||||||||||| ||||||||||||||||||||||||||  |||||||||    
T  36314700 tgtcaaactaaaaggacataattgaaactttcgaaatttaaaagactaacttgataattttgtcaaactaaaaggaccaaaagtggtatttg 36314791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 478 - 551
Target Start/End: Original strand, 34686896 - 34686969
Alignment:
Q  478 aactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggacca 551  Q
    ||||||||| | ||||||||||||||| ||| ||||||||||||||||| |||| ||||||| |||||||||||    
T  34686896 aactaaaaggacctatttaaaacttttaaaatttaaaggactaacttgataattctgtcaaattaaaaggacca 34686969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 503 - 567
Target Start/End: Complemental strand, 23179096 - 23179033
Alignment:
Q  503 ttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    |||||||||||||||||||||||  |||| ||||||||||||||||||||| |||||||||||||    
T  23179096 ttgaaacttaaaggactaacttgggaattctgtcaaactaaaaggaccaaa-atggtatttggcc 23179033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 431 - 538
Target Start/End: Complemental strand, 14871060 - 14870954
Alignment:
Q  431 tatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaat 530  Q
    |||||||||| ||| |||||||||||| ||||||  ||||| ||||||| ||| || || ||||| || ||||||||| ||||| |||||||||||||||    
T  14871060 tatttgaaacttttaaaatttaaaggactaacttatgaattctgtcaaattaagaggatttatttgaatcttttgaaatttaaa-gactaacttgaaaat 14870962  T
Q  531 tttgtcaa 538  Q
    | ||||||    
T  14870961 tctgtcaa 14870954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 478 - 553
Target Start/End: Complemental strand, 35433971 - 35433896
Alignment:
Q  478 aactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaa 553  Q
    ||||||||  ||||||||||||||||||||||||||| ||||||||||  |||| | ||||| |||||||||||||    
T  35433971 aactaaaaagatctatttaaaacttttgaaacttaaatgactaacttgtgaattctatcaaattaaaaggaccaaa 35433896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 442 - 567
Target Start/End: Complemental strand, 11113661 - 11113536
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaact 541  Q
    ||||||| |||||||| |||||||  |||| |||||||||||||| | ||  || |||||||  ||| |||||||||||||||   |||| |||||||||    
T  11113661 tttgaaacttaaaggactaacttggaaattctgtcaaactaaaaggacctgattgaaactttcaaaatttaaaggactaacttaggaattatgtcaaact 11113562  T
Q  542 aaaaggaccaaacatggtatttggcc 567  Q
    ||||||| | ||  ||||||||||||    
T  11113561 aaaaggatctaaagtggtatttggcc 11113536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 313 - 386
Target Start/End: Original strand, 14871241 - 14871314
Alignment:
Q  313 gacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaa 386  Q
    ||||||||| ||||||||||| ||| ||||||||||||||||||||| |||||| |||||| |  |||||||||    
T  14871241 gacaccctgaagcttttaaaaggcatcgttttgatccaagtcaacaacttaacgactacatcagcatcaattaa 14871314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 449 - 546
Target Start/End: Original strand, 43423062 - 43423159
Alignment:
Q  449 tttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaag 546  Q
    ||||||| | ||||||| ||||| |||||||||||||  | |||||| ||||||||||||||||||||| ||| |||| |||| | | ||||||||||    
T  43423062 tttaaagtactaacttgggaattttgtcaaactaaaatgacctatttgaaacttttgaaacttaaaggagtaaattgagaattctatgaaactaaaag 43423159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 442 - 550
Target Start/End: Original strand, 6236251 - 6236359
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaact 541  Q
    ||||||| |||||| | ||||||| ||| | ||||||| |||||| | ||| || ||||| ||||||||||||| | |||||||  |||||||| |||||    
T  6236251 tttgaaacttaaagtactaacttgggaagtctgtcaaattaaaaggacctaattgaaactattgaaacttaaagaaataacttgggaattttgtaaaact 6236350  T
Q  542 aaaaggacc 550  Q
    |||||||||    
T  6236351 aaaaggacc 6236359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 417 - 553
Target Start/End: Original strand, 40553296 - 40553432
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaagg 516  Q
    ||||||||| |||  | ||||||| ||||||| ||||| || ||||||   |||| |||||||||||||| | ||  || |||||||| ||||| |||||    
T  40553296 aaactaaaaggaccaaattgaaacttttgaaacttaaaagactaacttagaaattttgtcaaactaaaaggacctgattgaaactttttaaactcaaagg 40553395  T
Q  517 actaacttgaaaattttgtcaaactaaaaggaccaaa 553  Q
    ||||| ||   |||| |||||||||||||||||||||    
T  40553396 actaagttaggaattatgtcaaactaaaaggaccaaa 40553432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 309 - 567
Target Start/End: Complemental strand, 30576404 - 30576137
Alignment:
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaattattaactcacaac------- 401  Q
    |||||||||||  |||||||||||| ||| | ||||||| ||||||||||| ||||||||||||| || |||| ||||      ||| |||||           
T  30576404 ttttgacacccccgagcttttaaaaggcaacattttgattcaagtcaacaacttaacggctacatcaacatcagttaaacggagactgacaacaagggta 30576305  T
Q  402 --agagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaa 499  Q
      || |||||  ||||| |||||||| |||  ||||||||| ||| ||| ||||| || |||||||  |||| || ||||||||||| |  || || |||    
T  30576304 atagtgaaatagtttatcaactaaaaagaccaatttgaaacttttcaaacttaaaagactaacttggaaattctggcaaactaaaaggacttaattgaaa 30576205  T
Q  500 cttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    ||||  ||| ||||||||||||||||  |||| |||||| |||||| |||||||  || |||||||||    
T  30576204 ctttcaaaatttaaaggactaacttgggaattctgtcaagctaaaaagaccaaaagtgatatttggcc 30576137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 491 - 553
Target Start/End: Original strand, 35434341 - 35434403
Alignment:
Q  491 tatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaa 553  Q
    ||||| ||||||||||||||||||||| ||||||   |||| |||||||||||||||||||||    
T  35434341 tatttgaaacttttgaaacttaaaggattaacttaggaattatgtcaaactaaaaggaccaaa 35434403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 442 - 567
Target Start/End: Complemental strand, 9770671 - 9770546
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaact 541  Q
    ||||||| ||||| || ||||||||||||| | |||||||||||| |  || || ||||||| |||||||||| || |||||||  |||| |||||| ||    
T  9770671 tttgaaacttaaatgactaacttgagaattctctcaaactaaaaggacttaattgaaactttcgaaacttaaatgattaacttgggaattctgtcaatct 9770572  T
Q  542 aaaaggaccaaacatggtatttggcc 567  Q
    | ||||| ||||  |||||| |||||    
T  9770571 acaaggagcaaaagtggtatctggcc 9770546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 502 - 567
Target Start/End: Original strand, 11113729 - 11113794
Alignment:
Q  502 tttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    ||||||||||||| |||||  |||  |||||||||||| ||||||||||||| |||||||||||||    
T  11113729 tttgaaacttaaaagactagtttgggaattttgtcaaattaaaaggaccaaaaatggtatttggcc 11113794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 399 - 486
Target Start/End: Complemental strand, 5358736 - 5358649
Alignment:
Q  399 aacagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaag 486  Q
    ||||| |||||  ||||| |||||||| ||| ||||| |||| ||||||| || ||||| |||||||| |||| ||||||||||||||    
T  5358736 aacagcgaaatagtttatcaactaaaaggacctatttaaaacttttgaaacttgaaggactaacttgaaaattctgtcaaactaaaag 5358649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 491 - 550
Target Start/End: Original strand, 25730134 - 25730193
Alignment:
Q  491 tatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggacc 550  Q
    ||||| |||||||||||| ||||||||||||||||| |||| ||||||| ||||| ||||    
T  25730134 tatttgaaacttttgaaatttaaaggactaacttgagaattctgtcaaattaaaatgacc 25730193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 491 - 550
Target Start/End: Original strand, 25737620 - 25737679
Alignment:
Q  491 tatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggacc 550  Q
    ||||| |||||||||||| ||||||||||||||||| |||| ||||||| ||||| ||||    
T  25737620 tatttgaaacttttgaaatttaaaggactaacttgagaattctgtcaaattaaaaagacc 25737679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 502 - 553
Target Start/End: Original strand, 40553261 - 40553312
Alignment:
Q  502 tttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaa 553  Q
    ||||||||||||| || |||||||| |||| |||||||||||||||||||||    
T  40553261 tttgaaacttaaatgattaacttgagaattctgtcaaactaaaaggaccaaa 40553312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 490 - 553
Target Start/End: Complemental strand, 44040884 - 44040822
Alignment:
Q  490 ctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaa 553  Q
    ||||||||||||||||||||||||| | |||| ||| ||||| ||| |||||||||||||||||    
T  44040884 ctatttaaaacttttgaaacttaaaag-ctaatttgtaaattctgttaaactaaaaggaccaaa 44040822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 304 - 386
Target Start/End: Complemental strand, 9276740 - 9276658
Alignment:
Q  304 taacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaa 386  Q
    |||| |||||||| ||| || ||||||||| ||| | ||||||||||||||||||| |||| |||||||| || |||| ||||    
T  9276740 taacgttttgacatcctcgaacttttaaaaggcatcattttgatccaagtcaacaacttaaaggctacatgaacatcagttaa 9276658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 486
Target Start/End: Original strand, 34686890 - 34686964
Alignment:
Q  412 tttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaag 486  Q
    ||||| |||||||| ||| ||||| |||| ||| |||||||||||| |||||||| |||| ||||||| ||||||    
T  34686890 tttatcaactaaaaggacctatttaaaacttttaaaatttaaaggactaacttgataattctgtcaaattaaaag 34686964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 417 - 487
Target Start/End: Original strand, 41190328 - 41190398
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaaga 487  Q
    ||||||||||||| || ||||||  || ||||||||||| | ||| ||||||||| |||||||||||||||    
T  41190328 aaactaaaatgacctaattgaaattttcgaaatttaaagaactaatttgagaattctgtcaaactaaaaga 41190398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 386
Target Start/End: Original strand, 5358954 - 5359027
Alignment:
Q  313 gacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaa 386  Q
    ||||| ||||||||||||||| ||||| |||||||| |||||||||| ||||  ||||||| || |||| ||||    
T  5358954 gacactctggagcttttaaaaggcagctttttgatcaaagtcaacaacttaaaagctacatcaacatcagttaa 5359027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 501 - 550
Target Start/End: Complemental strand, 9770723 - 9770674
Alignment:
Q  501 ttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggacc 550  Q
    ||||||||||||||||||||||||   |||| ||||||||||||||||||    
T  9770723 ttttgaaacttaaaggactaacttcggaattctgtcaaactaaaaggacc 9770674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 309 - 386
Target Start/End: Complemental strand, 16197281 - 16197204
Alignment:
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaa 386  Q
    |||||||||| || ||||||||||| |||   ||||||||||||||||||||||||| |||| || || |||| ||||    
T  16197281 ttttgacaccttgaagcttttaaaaggcaatattttgatccaagtcaacaatttaacagctagatcaacatcagttaa 16197204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 417 - 486
Target Start/End: Original strand, 36314704 - 36314773
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaag 486  Q
    ||||||||| ||| || ||||||| || |||||||||| || |||||||| |||| ||||||||||||||    
T  36314704 aaactaaaaggacataattgaaactttcgaaatttaaaagactaacttgataattttgtcaaactaaaag 36314773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 433 - 549
Target Start/End: Complemental strand, 9770731 - 9770624
Alignment:
Q  433 tttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattt 532  Q
    |||||||  ||||||| |||||||| ||||||  ||||| |||||||||||||| | |||         ||||||||||||| ||||||||||| ||||     
T  9770731 tttgaaatttttgaaacttaaaggactaacttcggaattctgtcaaactaaaaggaccta---------tttgaaacttaaatgactaacttgagaattc 9770641  T
Q  533 tgtcaaactaaaaggac 549  Q
    | |||||||||||||||    
T  9770640 tctcaaactaaaaggac 9770624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 309 - 373
Target Start/End: Original strand, 25730003 - 25730067
Alignment:
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacat 373  Q
    |||| ||||| |||||||||||||| | | | ||||||||||||||||||| |||||| ||||||    
T  25730003 tttttacaccatggagcttttaaaaggtaacattttgatccaagtcaacaacttaacgactacat 25730067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 309 - 373
Target Start/End: Original strand, 25737489 - 25737553
Alignment:
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacat 373  Q
    |||| ||||| |||||||||||||| | | | ||||||||||||||||||| |||||| ||||||    
T  25737489 tttttacaccatggagcttttaaaaggtaacattttgatccaagtcaacaacttaacgactacat 25737553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 417 - 485
Target Start/End: Original strand, 29030175 - 29030243
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaa 485  Q
    ||||||||| |||||| ||||||| || |||| |||||||| |||||   |||||||||||||||||||    
T  29030175 aaactaaaaggacttaattgaaactttcgaaacttaaaggaataactaaggaattatgtcaaactaaaa 29030243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 309 - 357
Target Start/End: Original strand, 44041168 - 44041216
Alignment:
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaac 357  Q
    ||||||||||||| ||||||||||| | ||| |||||||||||||||||    
T  44041168 ttttgacaccctgaagcttttaaaaggtagcattttgatccaagtcaac 44041216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 307 - 366
Target Start/End: Original strand, 6236116 - 6236175
Alignment:
Q  307 cattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacg 366  Q
    ||||||||||||||| | | |||||||  ||||||||||||| |||||||||| ||||||    
T  6236116 cattttgacaccctgaaacatttaaaagacagcgttttgatctaagtcaacaacttaacg 6236175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 417 - 492
Target Start/End: Complemental strand, 11113626 - 11113551
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatcta 492  Q
    ||||||||| ||| |  ||||||| ||  |||||||||||| ||||||  |||||||||||||||||||| |||||    
T  11113626 aaactaaaaggacctgattgaaactttcaaaatttaaaggactaacttaggaattatgtcaaactaaaaggatcta 11113551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 286 - 364
Target Start/End: Complemental strand, 23179238 - 23179160
Alignment:
Q  286 atttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaa 364  Q
    ||||||| ||||| || ||| | ||||||||| ||| |||||||||||  |||  ||||||||||||||||||| ||||    
T  23179238 atttgtgatcattaaacgtagcgttttgacactctgaagcttttaaaagacagtattttgatccaagtcaacaacttaa 23179160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 416 - 490
Target Start/End: Complemental strand, 43422934 - 43422860
Alignment:
Q  416 taaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatc 490  Q
    |||| ||||| ||| || ||||||| ||  ||| |||||||| ||| ||||||||||| ||||||||||||||||    
T  43422934 taaaataaaaggacctaattgaaactttcaaaacttaaaggactaatttgagaattatatcaaactaaaagaatc 43422860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 125
Target Start/End: Original strand, 5358718 - 5358751
Alignment:
Q  92 gataaactatttcactgttacccctgctgtcaat 125  Q
    ||||||||||||| ||||||||||||||||||||    
T  5358718 gataaactatttcgctgttacccctgctgtcaat 5358751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 257
Target Start/End: Original strand, 5358861 - 5358918
Alignment:
Q  200 tcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactat 257  Q
    |||||||||  |||| |||||||||| |||||||| | |||||||||||| |||||||    
T  5358861 tcatttatacggctaaaaagacaactttttacaactagaaatgtctttctggcactat 5358918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 309 - 386
Target Start/End: Original strand, 23553749 - 23553825
Alignment:
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaa 386  Q
    |||||||||||| ||||||||||||  || | ||||||||||||||||||| |||| | |||||| || |||| ||||    
T  23553749 ttttgacaccctcgagcttttaaaaa-catcattttgatccaagtcaacaacttaaagactacatcaacatcagttaa 23553825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 442 - 563
Target Start/End: Original strand, 41190293 - 41190413
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaact 541  Q
    ||||||| ||||| || ||  ||||||||| | |||||||||||  | ||| || ||| ||| |||| |||||| ||||| |||| |||| |||||||||    
T  41190293 tttgaaacttaaatgactagattgagaattctatcaaactaaaatgacctaattgaaattttcgaaatttaaagaactaatttgagaattctgtcaaact 41190392  T
Q  542 aaaaggaccaaacatggtattt 563  Q
    |||| |||||||| || |||||    
T  41190393 aaaa-gaccaaacgtgctattt 41190413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 154; Significance: 3e-81; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 184 - 567
Target Start/End: Original strand, 11527790 - 11528183
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaac-t 282  Q
    ||||||||| ||||| | ||||||||||||| |||| |||||||||||||||  ||||||||||||| ||| |||  ||||||||||||||| ||||  |    
T  11527790 taatggtcacaaatgataatttatagtgctataaaggcaactatttacaacataaaatgtctttctaacacaattgaacgacatttatagtggtaaaaat 11527889  T
Q  283 gatatttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaa 382  Q
    ||||||||||  |||| ||  |||| ||||||||||||||| |||||||||  ||| |||||||||||||||||||| | ||||| |  || |  |||||    
T  11527890 gatatttgtgaccattaaacataacgttttgacaccctggaacttttaaaagacagtgttttgatccaagtcaacaactgaacggttgtatcagcatcaa 11527989  T
Q  383 ttaattattaactcaca---------acagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattat 473  Q
    ||||||||||||| |||         |||| |||||  ||||| |||||||||||| |||||||||| ||||||| |||||||||||| ||| || ||||    
T  11527990 ttaattattaactaacagcatgagtaacagtgaaatagtttatcaactaaaatgacatatttgaaacttttgaaacttaaaggattaagttgggacttat 11528089  T
Q  474 gtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    |||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||  |||||||| |||||||||||| | ||||||||||    
T  11528090 gtcaaactaaaagaatatatttgaaactttttaaacttaaaggactaacttgaaaattcggtcaaacttaaaggaccaaacgttgtatttggcc 11528183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 184 - 563
Target Start/End: Complemental strand, 17180002 - 17179614
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactg 283  Q
    ||||||||  ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| || | ||    
T  17180002 taatggtcccaaatgatcatttatagtgctagaaagacaactatttaccacaacaaatgtctttctagcactattaaacgacatttatagtgctagaatg 17179903  T
Q  284 at-atttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaa 382  Q
    || |||||||  |||| |  ||||| ||||||||||||||||||||||||| | | |  ||||||| |||||||||| |||||| |||||| |  ||||     
T  17179902 atcatttgtgaccattaagcgtaacgttttgacaccctggagcttttaaaaggtaac-atttgatctaagtcaacaacttaacgactacatcagcatcag 17179804  T
Q  383 ttaattattaactcac---------aacagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattat 473  Q
    ||||||||||||| ||         ||| | ||||||| |||| |||||||| ||| |||||||||  |||||||||||||||| |||||||| |||| |    
T  17179803 ttaattattaactgacagcaggagtaacggtgaaatgacttatcaactaaaaggacctatttgaaatttttgaaatttaaaggactaacttgaaaattct 17179704  T
Q  474 gtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtattt 563  Q
     |||||||||| | | ||| |||||| ||| |||||||||| | ||| ||||  |||| ||||||| |||||| | |||| |||||||||    
T  17179703 atcaaactaaagggacctaattaaaattttcgaaacttaaaaggctaccttgtgaattctgtcaaaataaaagaaacaaatatggtattt 17179614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 204 - 479
Target Start/End: Original strand, 17131984 - 17132265
Alignment:
Q  204 ttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactgat-atttgtgttcattgaat 302  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||| || | |||| ||||||   |||| |||    
T  17131984 ttatagtgctagaaaggcaactatttacaacaacaaatgtctttctagcactattaaacgacatttacagtgctagaatgatcatttgtaaccattaaat 17132083  T
Q  303 gtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaattattaactcac---- 398  Q
    |||| |||||||||||||||| ||||||||| |||  | ||||||||| |||||||||||||||| ||||| |  |||||||||||| ||||| ||        
T  17132084 gtaatattttgacaccctggaacttttaaaaggcaatg-tttgatccaggtcaacaatttaacggttacatcagcatcaattaattaataactaacagga 17132182  T
Q  399 --aacagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaa 479  Q
      ||| |  ||||  |||||||||||| |||||||||||||| | ||||||| |||||||||||||||||||||| |||||||    
T  17132183 gtaacggtaaaatagtttataaactaatatgacttatttgaatcttttgaaacttaaaggattaacttgagaattctgtcaaa 17132265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 314 - 563
Target Start/End: Original strand, 2839937 - 2840186
Alignment:
Q  314 acaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaattattaactcacaacaga--------- 404  Q
    |||||||| |||||||||||  |||||||||||||||| ||||| | ||||||||||||| ||||||||||||||||||||| |||||||              
T  2839937 acaccctgaagcttttaaaaaacagcgttttgatccaaatcaaccacttaacggctacatcaatatcaattaattattaactaacaacaggtataacggt 2840036  T
Q  405 gaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaactttt 504  Q
    |||||  ||||| |||||||||||| ||||||||||         ||||| |||||||||||||||| ||| |||||||||| |||||||  ||||||||    
T  2840037 gaaatagtttatcaactaaaatgacctatttgaaac---------ttaaatgattaacttgagaattctgttaaactaaaaggatctattcgaaactttt 2840127  T
Q  505 gaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtattt 563  Q
    |||||||||| ||||||||||| |||| ||| |||||||||||||||||| || |||||    
T  2840128 gaaacttaaatgactaacttgagaattatgttaaactaaaaggaccaaacgtgatattt 2840186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 195 - 371
Target Start/End: Complemental strand, 9902267 - 9902090
Alignment:
Q  195 aatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactgat-atttgtgt 293  Q
    |||| ||||||||||||||||||||||| ||||||||||||| ||||| ||||||| |||||||| ||||||||||||||| || | ||||  ||||||     
T  9902267 aatgatcatttatagtgctagaaagacagctatttacaacaataaatgcctttctatcactattaaacgacatttatagtgctagaatgatcgtttgtga 9902168  T
Q  294 tcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctac 371  Q
      ||| || ||||| |||| ||||  || ||||||||||| ||||||||||||||||||||||||| |||| ||||||    
T  9902167 cgattaaacgtaacgttttaacactttgaagcttttaaaaggcagcgttttgatccaagtcaacaacttaatggctac 9902090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 412 - 567
Target Start/End: Original strand, 17180122 - 17180277
Alignment:
Q  412 tttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaactt 511  Q
    ||||| |||||||||||  |||||||||| ||| ||| |||||||| |||||||| ||||||||||||||||||| |  || |||||||||| |||||||    
T  17180122 tttatcaactaaaatgatctatttgaaacttttaaaacttaaaggactaacttgaaaattatgtcaaactaaaaggacataattaaaactttcgaaactt 17180221  T
Q  512 aaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    |||||| ||| || |||||| | | ||||||||||||||||| |||||||||||||    
T  17180222 aaaggattaatttaaaaattatataaaactaaaaggaccaaaaatggtatttggcc 17180277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 412 - 567
Target Start/End: Complemental strand, 20575553 - 20575398
Alignment:
Q  412 tttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaactt 511  Q
    ||||| |||| ||||||| |||||||||| ||| ||| |||||||| |||||||  |||| | |||||||||||| | |||||||||||||| |||||||    
T  20575553 tttatcaactgaaatgacctatttgaaacttttaaaacttaaaggactaacttggaaattctatcaaactaaaaggacctatttaaaactttcgaaactt 20575454  T
Q  512 aaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    |||||||||||||| ||||| | ||||||||||||||||||   ||||||||||||    
T  20575453 aaaggactaacttggaaattctatcaaactaaaaggaccaatagtggtatttggcc 20575398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 417 - 563
Target Start/End: Complemental strand, 32417605 - 32417459
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaagg 516  Q
    ||||||||| ||| ||||| |||| ||||||| ||||| || |||||||| |||| |||||||||||||  |  || |||||||||| ||||||||||||    
T  32417605 aaactaaaaggacatatttaaaacttttgaaacttaaatgactaacttgaaaattttgtcaaactaaaatgacataattaaaactttcgaaacttaaagg 32417506  T
Q  517 actaacttgaaaattttgtcaaactaaaaggaccaaacatggtattt 563  Q
    ||||||||||||||| ||||||||||||||||||||| ||| |||||    
T  32417505 actaacttgaaaattctgtcaaactaaaaggaccaaaaatgatattt 32417459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 417 - 563
Target Start/End: Complemental strand, 32423446 - 32423300
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaagg 516  Q
    ||||||||| ||| ||||| |||| ||||||| ||||| || |||||||| |||| |||||||||||||  |  || |||||||||| ||||||||||||    
T  32423446 aaactaaaaggacatatttaaaacttttgaaacttaaatgactaacttgaaaattttgtcaaactaaaatgacataattaaaactttcgaaacttaaagg 32423347  T
Q  517 actaacttgaaaattttgtcaaactaaaaggaccaaacatggtattt 563  Q
    ||||||||||||||| ||||||||||||||||||||| ||| |||||    
T  32423346 actaacttgaaaattctgtcaaactaaaaggaccaaaaatgatattt 32423300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 184 - 395
Target Start/End: Complemental strand, 24139370 - 24139157
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactg 283  Q
    ||||||||| | ||| | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |   ||||||| ||| |||| ||    
T  24139370 taatggtcacagatgattatttataatgctagaaagacatctatttacaacaacaaatgtctttctagcactattaaatagcatttatggtgctaaaatg 24139271  T
Q  284 at-atttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaa-tttaacggctacattaatatca 381  Q
    || |||||||  |||| ||  |||| |||| | | ||| || |||||||||| || |||||||||| |||||||||| |||||| ||||||| |  |||     
T  24139270 ataatttgtgaccattaaacataacgttttaatatcctagaacttttaaaatacaacgttttgatctaagtcaacaactttaacagctacatcagcatct 24139171  T
Q  382 attaattattaact 395  Q
     |||||||||||||    
T  24139170 gttaattattaact 24139157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 442 - 553
Target Start/End: Complemental strand, 2839736 - 2839625
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaact 541  Q
    |||||||||||||||| ||||||||||||| ||||||| |||||| | ||| || |||||||||||||||||| ||||||||||| |||| | ||||| |    
T  2839736 tttgaaatttaaaggactaacttgagaattctgtcaaattaaaaggacctaattgaaacttttgaaacttaaacgactaacttgagaattctttcaaatt 2839637  T
Q  542 aaaaggaccaaa 553  Q
    ||||||||||||    
T  2839636 aaaaggaccaaa 2839625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 442 - 545
Target Start/End: Complemental strand, 32417640 - 32417537
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaact 541  Q
    ||||||| |||||||| ||| |||  |||| |||||||||||||| |  |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  32417640 tttgaaacttaaaggactaatttggaaattctgtcaaactaaaaggacatatttaaaacttttgaaacttaaatgactaacttgaaaattttgtcaaact 32417541  T
Q  542 aaaa 545  Q
    ||||    
T  32417540 aaaa 32417537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 442 - 545
Target Start/End: Complemental strand, 32423481 - 32423378
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaact 541  Q
    ||||||| |||||||| ||| |||  |||| |||||||||||||| |  |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  32423481 tttgaaacttaaaggactaatttggaaattctgtcaaactaaaaggacatatttaaaacttttgaaacttaaatgactaacttgaaaattttgtcaaact 32423382  T
Q  542 aaaa 545  Q
    ||||    
T  32423381 aaaa 32423378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 442 - 564
Target Start/End: Original strand, 9902278 - 9902400
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaact 541  Q
    ||||||| |||||| | ||||| | |||||||||||||||||||| |  || |||||||||| |||||||||| |||||||||||||||| |||||||||    
T  9902278 tttgaaacttaaagaactaactcgggaattatgtcaaactaaaaggacataattaaaactttcgaaacttaaaagactaacttgaaaattctgtcaaact 9902377  T
Q  542 aaaaggaccaaacatggtatttg 564  Q
    ||||| |||||| ||| ||||||    
T  9902378 aaaagaaccaaaaatgatatttg 9902400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 412 - 561
Target Start/End: Original strand, 10862570 - 10862720
Alignment:
Q  412 tttataaactaaaatgacttatttgaaacctttgaaatttaaag-gattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaact 510  Q
    ||||| |||||||| ||| |||||||||| |||||||||||||  || ||||| | ||||| | |||||||||||  |  || || |||||||  |||||    
T  10862570 tttatcaactaaaaggacctatttgaaacttttgaaatttaaaatgactaactggggaattctttcaaactaaaatgacttaattgaaactttcaaaact 10862669  T
Q  511 taaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtat 561  Q
    |||||||||||||||| |||| |||||||||||||||||||||| ||||||    
T  10862670 taaaggactaacttgagaattctgtcaaactaaaaggaccaaacgtggtat 10862720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 400 - 566
Target Start/End: Original strand, 24139479 - 24139644
Alignment:
Q  400 acagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaa 499  Q
    |||| ||||| |||||| |||||||| |||||||||||||  ||||||| |||||||| |||| ||| |||| | |||||||||||| |  || ||||||    
T  24139479 acagtgaaataatttatcaactaaaaagacttatttgaaatttttgaaacttaaaggactaacctgataattctatcaaactaaaaggacttaattaaaa 24139578  T
Q  500 cttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggc 566  Q
    |||| ||||||||||||||||| |||  |||| |||| ||||||||||| ||||  || ||||||||    
T  24139579 ctttcgaaacttaaaggactaatttgtgaattatgtc-aactaaaaggatcaaaattgatatttggc 24139644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 442 - 563
Target Start/End: Complemental strand, 11527647 - 11527526
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaact 541  Q
    ||||||| |||||||| ||||||| ||||| |||||||||||||| | ||| || ||||||| ||||||||||||||||||||   |||| ||||||| |    
T  11527647 tttgaaacttaaaggactaacttgtgaattttgtcaaactaaaaggacctaattgaaactttcgaaacttaaaggactaacttaggaattatgtcaaagt 11527548  T
Q  542 aaaaggaccaaacatggtattt 563  Q
    ||||||||||||  ||||||||    
T  11527547 aaaaggaccaaaagtggtattt 11527526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 417 - 564
Target Start/End: Original strand, 16168679 - 16168826
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaagg 516  Q
    ||||||||| ||| |||||||||| |||||||  |||  || ||||||||||||| |||||||||||||| | ||| || ||||||  |||||||||| |    
T  16168679 aaactaaaaagacctatttgaaacttttgaaacgtaatagactaacttgagaattctgtcaaactaaaaggacctaattgaaacttgcgaaacttaaatg 16168778  T
Q  517 actaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttg 564  Q
    ||||| ||| ||||| ||||||||||||| || ||||  |||||||||    
T  16168779 actaatttggaaattctgtcaaactaaaaagatcaaaagtggtatttg 16168826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 310 - 405
Target Start/End: Complemental strand, 17131773 - 17131679
Alignment:
Q  310 tttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaattattaactcacaacagag 405  Q
    |||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||| ||||| || ||||||||| || ||||| |||||||||    
T  17131773 tttgacaccctggaacttttaaaatgcaacgttt-gatccaagtcaacaatttaacggttacatcaacatcaattaaataataactgacaacagag 17131679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 10963001 - 10963089
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtg 275  Q
    ||||||||| ||||| |||||| |||||||||||||||||||||||||||||||   ||||||||| || |||||| |||||||||||||||    
T  10963001 taatggtcacaaatgatcatttgtagtgctagaaagacaactatttacaacaac---tgtctttcttgctctattaaacgacatttatagtg 10963089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 442 - 567
Target Start/End: Complemental strand, 16168576 - 16168451
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaact 541  Q
    ||||||| |||||||| |||||||  |||| |||||||||||||  | ||| || |||||||  ||||||||||||||||| ||| |||| | |||||||    
T  16168576 tttgaaacttaaaggactaacttggaaattctgtcaaactaaaatgacctaattgaaactttcaaaacttaaaggactaacgtgagaattctatcaaact 16168477  T
Q  542 aaaaggaccaaacatggtatttggcc 567  Q
    ||||||||||||  ||||||||||||    
T  16168476 aaaaggaccaaaagtggtatttggcc 16168451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 184 - 364
Target Start/End: Complemental strand, 28630487 - 28630318
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactg 283  Q
    |||| |||| ||||| |||||||||  | |||||||  | |||||||||||||||||||||||||||||||||||| || |||||||||||        |    
T  28630487 taatagtcacaaatgatcatttataacgttagaaaggtagctatttacaacaacaaatgtctttctagcactattaaacaacatttatagt--------g 28630396  T
Q  284 atatttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaa 364  Q
    |||||||||  |||| || ||||||||||||||||| | |||||||||||   | | |||| |||||||||||||| ||||    
T  28630395 atatttgtgaccattaaacgtaacattttgacaccccgaagcttttaaaa---aacattttaatccaagtcaacaacttaa 28630318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 459 - 567
Target Start/End: Original strand, 20575677 - 20575783
Alignment:
Q  459 taacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatgg 558  Q
    ||||||| ||||| |||||||||||||| |  ||||||||||||| ||||||||||  |||||||||| |||| ||||||||||||| ||||||| ||||    
T  20575677 taacttgggaattttgtcaaactaaaaggacttatttaaaactttcgaaacttaaa-aactaacttgagaattctgtcaaactaaaa-gaccaaaaatgg 20575774  T
Q  559 tatttggcc 567  Q
    |||||||||    
T  20575775 tatttggcc 20575783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 309 - 545
Target Start/End: Complemental strand, 10962991 - 10962746
Alignment:
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaattattaactcac---------a 399  Q
    |||||||| |||  |||||||||||  |||| ||||||||||||||||||| ||||||||||||| |  |||| ||||||||||||| ||         |    
T  10962991 ttttgacatcctaaagcttttaaaaaacagcattttgatccaagtcaacaacttaacggctacatcagcatcagttaattattaactgacagcaagggta 10962892  T
Q  400 acagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaa 499  Q
    || |  ||||  ||||| |||||||||||| |||||||||| ||| ||| |||||||| ||| ||   |||| | | ||| |||||| ||||| || |||    
T  10962891 acggtaaaatagtttatcaactaaaatgacatatttgaaacttttaaaacttaaaggactaatttagaaattctattaaaataaaaggatctaattgaaa 10962792  T
Q  500 cttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaa 545  Q
    |||| ||||||| |  || ||||||   ||||||||||||||||||    
T  10962791 ctttcgaaactttacagaataactttggaattttgtcaaactaaaa 10962746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 442 - 550
Target Start/End: Original strand, 16168644 - 16168752
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaact 541  Q
    ||||||| ||||| || ||||||| || ||  ||||||||||||  | |||||| ||||||||||||| |||  ||||||||||| |||| |||||||||    
T  16168644 tttgaaacttaaaagactaacttgggatttcagtcaaactaaaaagacctatttgaaacttttgaaacgtaatagactaacttgagaattctgtcaaact 16168743  T
Q  542 aaaaggacc 550  Q
    |||||||||    
T  16168744 aaaaggacc 16168752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 490 - 553
Target Start/End: Complemental strand, 9902022 - 9901959
Alignment:
Q  490 ctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaa 553  Q
    ||||||||||||||||||||| |||| ||||||||| ||||| || ||||||||||||||||||    
T  9902022 ctatttaaaacttttgaaactaaaagcactaacttggaaattctggcaaactaaaaggaccaaa 9901959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 412 - 567
Target Start/End: Original strand, 32417696 - 32417851
Alignment:
Q  412 tttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaactt 511  Q
    ||||| |||||||| ||| |||||||||| | ||||| ||||| || ||||||   |||| ||||||||| |||| | ||| || ||||||| |||| ||    
T  32417696 tttatcaactaaaaggacctatttgaaacttctgaaacttaaatgactaacttagaaattttgtcaaactgaaaggacctaattgaaactttcgaaagtt 32417795  T
Q  512 aaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    |||| |||||||||  |||| ||| ||||||||| || ||||  ||||||||||||    
T  32417796 aaagaactaacttgggaattctgtaaaactaaaaagatcaaaagtggtatttggcc 32417851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 412 - 567
Target Start/End: Original strand, 32423537 - 32423692
Alignment:
Q  412 tttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaactt 511  Q
    ||||| |||||||| ||| |||||||||| | ||||| ||||| || ||||||   |||| ||||||||| |||| | ||| || ||||||| |||| ||    
T  32423537 tttatcaactaaaaggacctatttgaaacttctgaaacttaaatgactaacttagaaattttgtcaaactgaaaggacctaattgaaactttcgaaagtt 32423636  T
Q  512 aaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    |||| |||||||||  |||| ||| ||||||||| || ||||  ||||||||||||    
T  32423637 aaagaactaacttgggaattctgtaaaactaaaaagatcaaaagtggtatttggcc 32423692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 492 - 550
Target Start/End: Original strand, 20575600 - 20575658
Alignment:
Q  492 atttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggacc 550  Q
    |||| |||||||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  20575600 atttgaaacttttgaaacttaaaggactaacttgggaattctgtcaaactaaaaggacc 20575658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 441 - 542
Target Start/End: Original strand, 9946717 - 9946818
Alignment:
Q  441 ctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaac 540  Q
    ||||||||||||||||| ||| |||  ||||||||||||||||||  | ||| || ||||||| || | |||||||||||||||  ||||| ||||||||    
T  9946717 ctttgaaatttaaaggactaatttggaaattatgtcaaactaaaatgacctaattgaaactttcgagatttaaaggactaacttagaaattatgtcaaac 9946816  T
Q  541 ta 542  Q
    ||    
T  9946817 ta 9946818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 309 - 373
Target Start/End: Original strand, 28630497 - 28630561
Alignment:
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacat 373  Q
    ||||||||||||| | ||||||||| ||||| ||||||||||||||||||| |||||| ||||||    
T  28630497 ttttgacaccctgtaacttttaaaaggcagcattttgatccaagtcaacaacttaacgactacat 28630561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 493 - 549
Target Start/End: Complemental strand, 32417649 - 32417593
Alignment:
Q  493 tttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggac 549  Q
    ||||||| ||||||||||||||||||||| ||| ||||| |||||||||||||||||    
T  32417649 tttaaaaattttgaaacttaaaggactaatttggaaattctgtcaaactaaaaggac 32417593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 493 - 549
Target Start/End: Complemental strand, 32423490 - 32423434
Alignment:
Q  493 tttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggac 549  Q
    ||||||| ||||||||||||||||||||| ||| ||||| |||||||||||||||||    
T  32423490 tttaaaaattttgaaacttaaaggactaatttggaaattctgtcaaactaaaaggac 32423434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 399 - 486
Target Start/End: Complemental strand, 10407403 - 10407316
Alignment:
Q  399 aacagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaag 486  Q
    ||||| ||||| |||||| |||||||||||| |||||||||| ||||||| |||||| | |||| |  ||||| ||||||||||||||    
T  10407403 aacagtgaaataatttatcaactaaaatgacatatttgaaacttttgaaacttaaagcagtaacataggaattttgtcaaactaaaag 10407316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 309 - 387
Target Start/End: Original strand, 9946586 - 9946664
Alignment:
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaat 387  Q
    ||||||||||||| ||||||||||||||| | || |||||||||| ||||| |||||||||| || |  ||||||||||    
T  9946586 ttttgacaccctgaagcttttaaaatgcaacattctgatccaagttaacaacttaacggctatatcagaatcaattaat 9946664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 432 - 502
Target Start/End: Original strand, 20575600 - 20575670
Alignment:
Q  432 atttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaactt 502  Q
    ||||||||| ||||||| |||||||| ||||||| ||||| |||||||||||||| | |||||| ||||||    
T  20575600 atttgaaacttttgaaacttaaaggactaacttgggaattctgtcaaactaaaaggacctatttgaaactt 20575670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 318 - 373
Target Start/End: Original strand, 24139388 - 24139443
Alignment:
Q  318 cctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacat 373  Q
    |||| ||||||||||||| || |||||||||||||||||||| |||| ||||||||    
T  24139388 cctgaagcttttaaaatgtagtgttttgatccaagtcaacaacttaatggctacat 24139443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 309 - 373
Target Start/End: Original strand, 17180012 - 17180076
Alignment:
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacat 373  Q
    |||||||||| | ||| |||||||| ||||| ||||||| ||||||||||| |||||| ||||||    
T  17180012 ttttgacaccatcgagtttttaaaaggcagcattttgattcaagtcaacaacttaacgactacat 17180076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 491 - 549
Target Start/End: Complemental strand, 10407371 - 10407313
Alignment:
Q  491 tatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggac 549  Q
    ||||| ||||||||||||||||||| | |||| |   ||||||||||||||||||||||    
T  10407371 tatttgaaacttttgaaacttaaagcagtaacataggaattttgtcaaactaaaaggac 10407313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 417 - 482
Target Start/End: Original strand, 9946753 - 9946818
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaacta 482  Q
    ||||||||||||| || ||||||| || || |||||||||| ||||||   |||||||||||||||    
T  9946753 aaactaaaatgacctaattgaaactttcgagatttaaaggactaacttagaaattatgtcaaacta 9946818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 417 - 486
Target Start/End: Complemental strand, 11527612 - 11527543
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaag 486  Q
    ||||||||| ||| || ||||||| || |||| |||||||| ||||||  ||||||||||||| ||||||    
T  11527612 aaactaaaaggacctaattgaaactttcgaaacttaaaggactaacttaggaattatgtcaaagtaaaag 11527543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 417 - 486
Target Start/End: Complemental strand, 16168541 - 16168472
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaag 486  Q
    ||||||||||||| || ||||||| ||  ||| |||||||| |||| |||||||| | ||||||||||||    
T  16168541 aaactaaaatgacctaattgaaactttcaaaacttaaaggactaacgtgagaattctatcaaactaaaag 16168472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0746 (Bit Score: 133; Significance: 9e-69; HSPs: 4)
Name: scaffold0746
Description:

Target: scaffold0746; HSP #1
Raw Score: 133; E-Value: 9e-69
Query Start/End: Original strand, 194 - 553
Target Start/End: Complemental strand, 387 - 21
Alignment:
Q  194 aaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactgatatttgtgt 293  Q
    ||||||| ||||||||||||||||||||| ||||||||||| |||||||  |||  |||||||||| ||||||||||||||| |||| |||| ||||||     
T  387 aaatggttatttatagtgctagaaagacagctatttacaaccacaaatgcattttgagcactattaaacgacatttatagtgctaaaatgatgtttgtga 288  T
Q  294 tcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaattattaa 393  Q
     |||| || ||||| ||||||||||| | ||||||||||| ||| || |||||||||  ||||||| ||||| | ||||| || ||||||||||||||||    
T  287 ccattaaacgtaacgttttgacaccc-gaagcttttaaaaggcatcgctttgatccacatcaacaacttaaccgttacatcaacatcaattaattattaa 189  T
Q  394 ctcac---------aacagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaa 484  Q
    || ||         ||||| |||||  ||||| |||||||||||| |||||||||| ||| ||| |||||  | ||||||  |||||  |||||||||||    
T  188 ctgacaacaggagtaacagtgaaatagtttatcaactaaaatgacatatttgaaacttttcaaacttaaa-tactaacttaggaattcggtcaaactaaa 90  T
Q  485 agaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaa 553  Q
    || || ||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||    
T  89 aggatatatttaaaacttttgaaacttgaaggactaacttgagaattatgtcaaactaaaaggaccaaa 21  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0746; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 399 - 552
Target Start/End: Original strand, 505 - 658
Alignment:
Q  399 aacagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaa 498  Q
    ||||| |||||  ||||| |||||||||||| |||||||||| |||||||||||||||| ||||||||||||| ||||||| |||||| | ||| || ||    
T  505 aacagtgaaatagtttatcaactaaaatgacctatttgaaacttttgaaatttaaaggactaacttgagaattctgtcaaattaaaaggacctaattgaa 604  T
Q  499 acttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaa 552  Q
    |||||  |||||||||||||||||||||||||| | ||||| ||||||||||||    
T  605 actttcaaaacttaaaggactaacttgaaaattctatcaaattaaaaggaccaa 658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0746; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 309 - 373
Target Start/End: Original strand, 406 - 470
Alignment:
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacat 373  Q
    |||| ||||| |||||||||||||| ||| | || |||||||||||||||| |||||||||||||    
T  406 tttttacaccatggagcttttaaaaggcaacattgtgatccaagtcaacaacttaacggctacat 470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0746; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 125
Target Start/End: Complemental strand, 523 - 490
Alignment:
Q  92 gataaactatttcactgttacccctgctgtcaat 125  Q
    ||||||||||||||||||||||||||| ||||||    
T  523 gataaactatttcactgttacccctgccgtcaat 490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 121; Significance: 1e-61; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 194 - 564
Target Start/End: Original strand, 11871506 - 11871886
Alignment:
Q  194 aaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactgat-atttgtg 292  Q
    ||||| ||||||||||||||||||| ||| |||||||||||||||||||| |||||| |||||||| ||||||||||||||| || | |||| |||||||    
T  11871506 aaatgatcatttatagtgctagaaatacagctatttacaacaacaaatgtttttctaccactattaaacgacatttatagtgctagaatgatcatttgtg 11871605  T
Q  293 ttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaattatta 392  Q
       ||| || ||||| ||||||||||||| |||||||||||  || | |||||||| ||||||||||||||||| |||||| |  |||| ||||||||||    
T  11871606 acgattaaacgtaacgttttgacaccctgaagcttttaaaagccaccattttgatcaaagtcaacaatttaacgactacatcagcatcagttaattatta 11871705  T
Q  393 actcacaacagag---------aaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaa 483  Q
    |||   | ||| |         |||| |||||| |||||||||||| ||||| |||| ||||||| |||||||| ||||| ||||||| |||||||||||    
T  11871706 actggtagcaggggtaacggttaaataatttatcaactaaaatgacatatttaaaacttttgaaacttaaaggactaactcgagaattctgtcaaactaa 11871805  T
Q  484 aagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttg 564  Q
     || |  || || ||| |||  |||||||| |||||  |||| ||||| |||||||||||||||||||||||| |||||||    
T  11871806 gaggacataattgaaagtttcaaaacttaacggactggcttggaaattctgtcaaactaaaaggaccaaacatagtatttg 11871886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 184 - 492
Target Start/End: Complemental strand, 20535821 - 20535502
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactg 283  Q
    ||||||||| ||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |   |||||||| || || | ||    
T  20535821 taatggtcacaaataatcatttatagtgcgagaaagacaactatttacaacaacaaatgtctttctaacactattaaaatgcatttataatgctagaatg 20535722  T
Q  284 at-atttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaa 382  Q
     | |||||||   ||| || |||||||||||||||  | |||||||||||| ||| ||||||||||||||||||||| ||||||||||||| || ||||     
T  20535721 gtcatttgtgacgattaaacgtaacattttgacacttttgagcttttaaaaggcaacgttttgatccaagtcaacaacttaacggctacatcaacatcag 20535622  T
Q  383 ttaattattaactcac---------aacagagaaatgatttataaactaaaatgacttatttgaaacctttgaaa-tttaaaggattaacttgagaatta 472  Q
    ||||||||||||| ||         ||| | |||||  ||||| |||||||||||| |||||||||| ||||||| |||||| || |||||||| |||||    
T  20535621 ttaattattaactgacagcagggataacggtgaaatagtttatcaactaaaatgacctatttgaaacatttgaaactttaaatgactaacttgataatta 20535522  T
Q  473 tgtcaaactaaaagaatcta 492  Q
    ||| |||||||||| |||||    
T  20535521 tgttaaactaaaaggatcta 20535502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 184 - 406
Target Start/End: Original strand, 15506250 - 15506473
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactg 283  Q
    ||||| ||||||||| ||||| |||||||||||||||||  ||||||||||||||||||| ||||| ||||||||| ||| ||||||||||| || | ||    
T  15506250 taatgctcataaatgatcattcatagtgctagaaagacagttatttacaacaacaaatgtttttcttgcactattaaacggcatttatagtgctagaatg 15506349  T
Q  284 at-atttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaa 382  Q
    || |||||||   ||| || |||| ||||||||||||||||| ||||||||   || ||||||||| |||||||||||||||||||||||| || ||||     
T  15506350 atcatttgtgacaattaaacgtaatattttgacaccctggagattttaaaacatagtgttttgatcaaagtcaacaatttaacggctacatcaacatcag 15506449  T
Q  383 ttaattattaactcacaacagaga 406  Q
    ||||||||||| | ||| ||||||    
T  15506450 ttaattattaattgacagcagaga 15506473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 184 - 564
Target Start/End: Complemental strand, 27893422 - 27893023
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactg 283  Q
    ||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |  || | ||    
T  27893422 taatggtcacaaatgatcatttattgtgctagaaagacaactatttacaacaacaaacgtctttctagcactattaaacgacatttataattctagaatg 27893323  T
Q  284 at-atttgtgttcattgaatgtaacattttgacaccctggagcttttaa------------------aatgcagcgttttgatccaagtcaacaatttaa 364  Q
    || |||||||   ||| || ||||| |  | ||||||||||||||||||                  || |||||||||||||| |||||||||| ||||    
T  27893322 atcatttgtgacgattaaacgtaacgtcctaacaccctggagcttttaaatggcaacgttttgatctaaggcagcgttttgatctaagtcaacaacttaa 27893223  T
Q  365 cggctacattaatatcaattaattattaactcacaacaga---------gaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaag 455  Q
    ||||||||| |  |||||||||||||||||| ||| ||||         |||||  ||||| |||||||| ||| ||||||||||         ||||||    
T  27893222 cggctacatcatcatcaattaattattaactgacagcagaggtaacgttgaaatagtttatcaactaaaaagacctatttgaaac---------ttaaag 27893132  T
Q  456 gattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaaca 555  Q
    || ||||||| ||||  |||||||||||||  || || || ||||||| |||| |||||||| |||||||| |||| ||||||||||||||||||||||     
T  27893131 gactaacttgggaatactgtcaaactaaaaagatataattgaaactttcgaaatttaaaggattaacttgagaattctgtcaaactaaaaggaccaaacg 27893032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 307 - 553
Target Start/End: Original strand, 27893430 - 27893685
Alignment:
Q  307 cattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaattattaactcacaacagag- 405  Q
    |||||||||| ||| || ||||||||  ||| | ||||||||||||||||||||||||||||||||| || |||| ||||      ||| ||||||| |     
T  27893430 cattttgacatcctcgaccttttaaatggcaacattttgatccaagtcaacaatttaacggctacatcaacatcagttaaacggagactgacaacagggt 27893529  T
Q  406 --------aaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaa 497  Q
            ||||  ||||| |||||||||||  |||||||||| ||||||| |||||||| ||||||| ||||| |||||||||||||||| ||| || |    
T  27893530 taacgatgaaatagtttatcaactaaaatgatctatttgaaacttttgaaacttaaaggactaacttgggaattctgtcaaactaaaagaacctaattga 27893629  T
Q  498 aacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaa 553  Q
    |||||  |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  27893630 aacttacgaaacttaaaggactaacttgagaattttgtcaaactaaaaggaccaaa 27893685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 184 - 556
Target Start/End: Original strand, 39301578 - 39301951
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactg 283  Q
    ||||||||| | ||| | ||||||||||||||||||| |  |||||||||||||||||   ||||||||||||||| ||||||||||||||| || | ||    
T  39301578 taatggtcacagatgattatttatagtgctagaaagatagttatttacaacaacaaatacttttctagcactattaaacgacatttatagtgttagaatg 39301677  T
Q  284 at-atttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaa 382  Q
    || |||| ||   ||| || ||||  |||||||||| ||||||||||||||  || ||||||||||||||||| ||||||||  ||||| | ||  | |     
T  39301678 atcatttctgacaattaaacgtaaagttttgacaccatggagcttttaaaagacaacgttttgatccaagtcaccaatttaatagctacgtcaacgttag 39301777  T
Q  383 ttaattattaactcacaacaga---------gaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattat 473  Q
    ||||||||||||| |||||||          |||||  ||||| |||||||||| | ||||||||||         |||||| | |||||| | |||| |    
T  39301778 ttaattattaactgacaacagtagtaacagtgaaatagtttatcaactaaaatggcctatttgaaac---------ttaaagaaataacttaaaaattct 39301868  T
Q  474 gtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacat 556  Q
    ||||||||||||  || || ||||||||||| ||| ||||||||||||||| |||||| | |||||||||||||||| |||||    
T  39301869 gtcaaactaaaaagatttaattaaaacttttaaaatttaaaggactaacttaaaaattctatcaaactaaaaggaccgaacat 39301951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 433 - 550
Target Start/End: Complemental strand, 30907253 - 30907136
Alignment:
Q  433 tttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattt 532  Q
    |||||||| ||||||| ||||| || ||||||| |||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||| ||||     
T  30907253 tttgaaacttttgaaacttaaatgactaacttgggaattatgtcaatctaaaaggatctatttgaaacttttgaaacttaaaggactaacttgagaatta 30907154  T
Q  533 tgtcaaactaaaaggacc 550  Q
    ||||||||||||||||||    
T  30907153 tgtcaaactaaaaggacc 30907136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 431 - 566
Target Start/End: Complemental strand, 30907195 - 30907061
Alignment:
Q  431 tatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaat 530  Q
    |||||||||| ||||||| |||||||| |||||||||||||||||||||||||||| | ||| || ||||||| |||||||||| ||||||||||| |||    
T  30907195 tatttgaaacttttgaaacttaaaggactaacttgagaattatgtcaaactaaaaggacctaattgaaactttcgaaacttaaaagactaacttgagaat 30907096  T
Q  531 tttgtcaaactaaaaggaccaaacatggtatttggc 566  Q
    | ||||||||||||| ||||||| ||| ||||||||    
T  30907095 tctgtcaaactaaaa-gaccaaaaatgatatttggc 30907061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 431 - 553
Target Start/End: Complemental strand, 31264046 - 31263924
Alignment:
Q  431 tatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaat 530  Q
    |||||||||| ||||||| |||||||| ||||||||||||| |||||||||||||| | ||| || ||||||| ||||||||||||| ||||||| ||||    
T  31264046 tatttgaaacttttgaaacttaaaggactaacttgagaattctgtcaaactaaaaggacctaattgaaactttcgaaacttaaaggattaacttggaaat 31263947  T
Q  531 tttgtcaaactaaaaggaccaaa 553  Q
    | ||||||||||||| |||||||    
T  31263946 tctgtcaaactaaaaagaccaaa 31263924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 184 - 351
Target Start/End: Original strand, 19080891 - 19081057
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactg 283  Q
    ||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||| || | ||    
T  19080891 taatgatcacaaatgatcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctaccactattaaacgtcatttatagtgttagaatg 19080990  T
Q  284 at-atttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaa 351  Q
    || | | |||   ||| |||||||| ||||||||||||| ||  ||| ||| ||| |||||||||||||    
T  19080991 atcagtcgtgacgattaaatgtaacgttttgacaccctgcag--ttttaaaggcaacgttttgatccaa 19081057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 423 - 567
Target Start/End: Original strand, 30907308 - 30907453
Alignment:
Q  423 aaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaac-taaaagaatctatttaaaacttttgaaacttaaaggactaa 521  Q
    |||||||||||||||||| ||||||| |||||||| ||||||||||||| | |||||| |||||| | ||| || ||||||| |||||||||| ||||||    
T  30907308 aaatgacttatttgaaacttttgaaacttaaaggactaacttgagaattctttcaaacttaaaaggacctaattgaaactttcgaaacttaaatgactaa 30907407  T
Q  522 cttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    |||  ||||||||||||||||||||||  |||  ||||||||||||    
T  30907408 cttataaattttgtcaaactaaaaggattaaaagtggtatttggcc 30907453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 434 - 553
Target Start/End: Original strand, 16781054 - 16781174
Alignment:
Q  434 ttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaactt-aaaggactaacttgaaaattt 532  Q
    ||||||| |||||||||||||||| ||||||| ||||| |||||||||||||| | ||| ||||||||||  |||||| ||||||||||||||| ||||     
T  16781054 ttgaaacttttgaaatttaaaggactaacttgtgaattttgtcaaactaaaaggacctaattaaaactttcaaaacttaaaaggactaacttgagaattc 16781153  T
Q  533 tgtcaaactaaaaggaccaaa 553  Q
    ||||||||||||| |||||||    
T  16781154 tgtcaaactaaaatgaccaaa 16781174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 442 - 550
Target Start/End: Complemental strand, 31264095 - 31263987
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaact 541  Q
    ||||||| |||||| | ||||||| ||||| |||||||  ||||||| |||||| |||||||||||||||||||||||||||||| |||| |||||||||    
T  31264095 tttgaaacttaaagtactaacttgggaattctgtcaaagaaaaagaacctatttgaaacttttgaaacttaaaggactaacttgagaattctgtcaaact 31263996  T
Q  542 aaaaggacc 550  Q
    |||||||||    
T  31263995 aaaaggacc 31263987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 412 - 564
Target Start/End: Complemental strand, 34336175 - 34336023
Alignment:
Q  412 tttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaactt 511  Q
    ||||| |||||||| ||| ||||| |||| ||||||| |||||||| ||||||| ||||| |||||||||||||  |  || || |||||||  ||||||    
T  34336175 tttattaactaaaaagacctatttaaaacttttgaaacttaaaggactaacttgggaattctgtcaaactaaaatgacataattgaaactttcaaaactt 34336076  T
Q  512 aaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttg 564  Q
    |||||||||| ||||||||||| |||||||||||||| ||||  |||||||||    
T  34336075 aaaggactaatttgaaaattttatcaaactaaaaggatcaaaagtggtatttg 34336023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 412 - 553
Target Start/End: Original strand, 36196487 - 36196626
Alignment:
Q  412 tttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaactt 511  Q
    ||||| |||||||||||| |||||||||| ||||||| | ||| || |||||||  |||| |||||||||||||  | ||| || ||||||| |||||||    
T  36196487 tttatcaactaaaatgacctatttgaaacttttgaaactcaaatgactaacttggaaattctgtcaaactaaaaagacctaattgaaactttcgaaactt 36196586  T
Q  512 aaaggactaacttgaaaattttgtcaaactaaaaggaccaaa 553  Q
    |||||||||| |||||||  ||||||||||||||||||||||    
T  36196587 aaaggactaatttgaaaa--ttgtcaaactaaaaggaccaaa 36196626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 417 - 553
Target Start/End: Original strand, 34336262 - 34336398
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaagg 516  Q
    |||||| || |||||||||||||| |||||||||||||| | ||| ||||||||| ||||||| |||||| |  ||  | ||||||| |||| |||||||    
T  34336262 aaactacaaggacttatttgaaacttttgaaatttaaagaactaatttgagaattttgtcaaattaaaaggacttaactgaaactttcgaaatttaaagg 34336361  T
Q  517 actaacttgaaaattttgtcaaactaaaaggaccaaa 553  Q
    ||||| |||| |||| |||||||||||||||||||||    
T  34336362 actaatttgagaattctgtcaaactaaaaggaccaaa 34336398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 450 - 567
Target Start/End: Original strand, 37543101 - 37543218
Alignment:
Q  450 ttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggac 549  Q
    |||||||| || ||||  ||||||||||||||||||| |  || || |||||||  ||||||||| |||||||||||||||| |||||||||||||| ||    
T  37543101 ttaaaggactaccttggaaattatgtcaaactaaaaggacttaattgaaactttcaaaacttaaaagactaacttgaaaattctgtcaaactaaaagaac 37543200  T
Q  550 caaacatggtatttggcc 567  Q
    |||| |||||||||||||    
T  37543201 caaaaatggtatttggcc 37543218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 478 - 564
Target Start/End: Original strand, 42117196 - 42117282
Alignment:
Q  478 aactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttg 564  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||  || || || |||||||||||||||||| ||||||||||    
T  42117196 aactaaaaggacctatttaaaacttttgaaacttaaaggactaacttagaatttctgacaaactaaaaggaccaaaaatggtatttg 42117282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 442 - 549
Target Start/End: Original strand, 34336227 - 34336334
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaact 541  Q
    ||||||| ||||| ||||||||||| |||| |||||||||| ||| |  ||||| |||||||||||| |||||| ||||| |||| |||||||||||| |    
T  34336227 tttgaaacttaaaagattaacttgaaaattctgtcaaactacaaggacttatttgaaacttttgaaatttaaagaactaatttgagaattttgtcaaatt 34336326  T
Q  542 aaaaggac 549  Q
    ||||||||    
T  34336327 aaaaggac 34336334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 36196365 - 36196274
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtg 275  Q
    ||||||||| ||||| |||||||||||||||||| |||| ||||| ||||||||| |||||||| ||||||||||| | |||||||| ||||    
T  36196365 taatggtcacaaatgatcatttatagtgctagaaggacagctattaacaacaacagatgtctttttagcactattaaatgacatttaaagtg 36196274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 431 - 545
Target Start/End: Complemental strand, 8260506 - 8260392
Alignment:
Q  431 tatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaat 530  Q
    |||||||||| ||||||| ||||| || ||| ||||||| | |||||||||||||  ||||| || ||||||| ||||||||||||||||| |||| |||    
T  8260506 tatttgaaacttttgaaaattaaaagagtaatttgagaactctgtcaaactaaaatgatctaattgaaactttcgaaacttaaaggactaatttgagaat 8260407  T
Q  531 tttgtcaaactaaaa 545  Q
    | ||| |||||||||    
T  8260406 tctgtaaaactaaaa 8260392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 442 - 552
Target Start/End: Complemental strand, 34429791 - 34429681
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaact 541  Q
    ||||||| ||||||||||||||||  |||| | ||||| |||||| | ||| || ||| ||| |||| ||||||||||||||||| |||| |||||||||    
T  34429791 tttgaaacttaaaggattaacttggaaattctttcaaattaaaaggacctaattgaaattttcgaaatttaaaggactaacttgagaattctgtcaaact 34429692  T
Q  542 aaaaggaccaa 552  Q
    |||||||||||    
T  34429691 aaaaggaccaa 34429681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 442 - 546
Target Start/End: Complemental strand, 32341564 - 32341459
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaactt-aaaggactaacttgaaaattttgtcaaac 540  Q
    ||||||||||| |||| ||| ||||||||| ||||||| |||||||| |||||| ||| |||| |||||| |||||||||| ||||||||| | ||||||    
T  32341564 tttgaaatttataggactaaattgagaattctgtcaaaataaaagaacctatttgaaatttttaaaacttaaaaggactaatttgaaaattctttcaaac 32341465  T
Q  541 taaaag 546  Q
    ||||||    
T  32341464 taaaag 32341459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 412 - 553
Target Start/End: Original strand, 31264142 - 31264285
Alignment:
Q  412 tttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaactt 511  Q
    ||||| |||||||| ||| |||||||||| ||||||| |||||  | |||||||  |||| |||||||||||||| |  || || ||||||| |||||||    
T  31264142 tttatcaactaaaaggacctatttgaaacttttgaaacttaaataactaacttggaaattctgtcaaactaaaaggacttaattgaaactttcgaaactt 31264241  T
Q  512 aaaggac--taacttgaaaattttgtcaaactaaaaggaccaaa 553  Q
    |||| ||  ||||||| ||||| |||||||||||||||| ||||    
T  31264242 aaagtactataacttggaaattctgtcaaactaaaaggatcaaa 31264285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 442 - 553
Target Start/End: Original strand, 41265258 - 41265369
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaact 541  Q
    ||||||| |||||||| ||||||||||||| ||||||| ||| || |  || || ||||||| |||||||||| ||||||||||| |||| | |||||||    
T  41265258 tttgaaacttaaaggactaacttgagaattctgtcaaattaagaggacataattgaaactttcgaaacttaaatgactaacttgataattctctcaaact 41265357  T
Q  542 aaaaggaccaaa 553  Q
    ||||||| ||||    
T  41265358 aaaaggatcaaa 41265369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 442 - 521
Target Start/End: Original strand, 20535967 - 20536046
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaa 521  Q
    ||||||| ||||| || |||||||||||||||||||||||||||  || || |||||||||| | |||||||||||||||    
T  20535967 tttgaaacttaaaagactaacttgagaattatgtcaaactaaaatgatataattaaaactttcgtaacttaaaggactaa 20536046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 442 - 553
Target Start/End: Complemental strand, 37543057 - 37542948
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaact 541  Q
    ||||||| |||||||| |||||||  ||||||||||||||||||  |  || |||||||||| |||||||||| |||||||||| || || |||||||||    
T  37543057 tttgaaacttaaaggactaacttggaaattatgtcaaactaaaatgacttaattaaaactttcgaaacttaaaagactaacttg-aagttctgtcaaact 37542959  T
Q  542 aaaaggaccaaa 553  Q
     |||||||||||    
T  37542958 -aaaggaccaaa 37542948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 501 - 567
Target Start/End: Complemental strand, 21813257 - 21813191
Alignment:
Q  501 ttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    |||||||||||||||||||||||||| |||| | ||||||||||||||| |||  ||||||||||||    
T  21813257 ttttgaaacttaaaggactaacttgagaattctatcaaactaaaaggactaaaagtggtatttggcc 21813191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 309 - 370
Target Start/End: Original strand, 36196375 - 36196436
Alignment:
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggcta 370  Q
    |||||||||||| ||| |||||||| ||||| ||||||||||||||||||| ||||||||||    
T  36196375 ttttgacaccctcgagtttttaaaaggcagcattttgatccaagtcaacaacttaacggcta 36196436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 442 - 567
Target Start/End: Complemental strand, 39376283 - 39376159
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaact 541  Q
    |||||||||||||| | ||||||  |||||  || |||||||||| ||||| || |||||||  |||||| |||||| ||||||| |||| ||| |||||    
T  39376283 tttgaaatttaaag-actaacttaggaattccgtaaaactaaaaggatctagttgaaactttcaaaacttgaaggaccaacttgagaattatgttaaact 39376185  T
Q  542 aaaaggaccaaacatggtatttggcc 567  Q
    |||| ||| ||| |||||||||||||    
T  39376184 aaaatgacaaaaaatggtatttggcc 39376159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 502 - 550
Target Start/End: Complemental strand, 5116955 - 5116907
Alignment:
Q  502 tttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggacc 550  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||    
T  5116955 tttgaaacttaaaggactaatttaaaaattttgtcaaactaaaaggacc 5116907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 412 - 564
Target Start/End: Complemental strand, 19080769 - 19080617
Alignment:
Q  412 tttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaactt 511  Q
    ||||| |||||||| ||| ||| |||||| ||||||| ||||| |  |||||||| |||| |||||||||||||  | ||| || |||||||  ||||||    
T  19080769 tttatcaactaaaaggacctatatgaaacttttgaaacttaaatgtctaacttgaaaattctgtcaaactaaaatgacctaattgaaactttcaaaactt 19080670  T
Q  512 aaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttg 564  Q
    |||||| ||| |    |||| |||| |||||||| ||||||| ||||||||||    
T  19080669 aaaggattaattaaggaattctgtcgaactaaaatgaccaaaaatggtatttg 19080617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 286 - 386
Target Start/End: Complemental strand, 19080904 - 19080804
Alignment:
Q  286 atttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaatta 385  Q
    ||||||| ||||| ||  || |||||||||||||| ||||||||||||  |||  |||||||||| |||||||| ||||||| ||||| || ||||||||    
T  19080904 atttgtgatcattaaacatagcattttgacaccctcgagcttttaaaagacagtattttgatccatgtcaacaacttaacggttacatcaacatcaatta 19080805  T
Q  386 a 386  Q
    |    
T  19080804 a 19080804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 486
Target Start/End: Complemental strand, 15506126 - 15506052
Alignment:
Q  412 tttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaag 486  Q
    ||||| || ||||||||| | ||| |||| ||| ||| |||||||||||| ||||||||||||||||||||||||    
T  15506126 tttatcaattaaaatgacctctttaaaactttttaaacttaaaggattaatttgagaattatgtcaaactaaaag 15506052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 509 - 566
Target Start/End: Original strand, 13315808 - 13315865
Alignment:
Q  509 cttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggc 566  Q
    ||||||||||||||||| ||||| |||||||||||||||| |||| ||||| ||||||    
T  13315808 cttaaaggactaacttggaaattatgtcaaactaaaaggatcaaaaatggtctttggc 13315865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 493 - 550
Target Start/End: Complemental strand, 15506105 - 15506048
Alignment:
Q  493 tttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggacc 550  Q
    |||||||||||| |||||||||||| ||| |||| |||| ||||||||||||||||||    
T  15506105 tttaaaactttttaaacttaaaggattaatttgagaattatgtcaaactaaaaggacc 15506048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 502 - 563
Target Start/End: Complemental strand, 16780989 - 16780928
Alignment:
Q  502 tttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtattt 563  Q
    |||||||||||||||||||||||||||||| |||| || |||||||| ||||  ||||||||    
T  16780989 tttgaaacttaaaggactaacttgaaaattctgtcgaattaaaaggatcaaaagtggtattt 16780928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 433 - 538
Target Start/End: Original strand, 39376351 - 39376456
Alignment:
Q  433 tttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattt 532  Q
    ||||| || |||||||  ||||||| ||||||  ||| | ||||||| |||||  | |||||| |||| |||||||||||||||||||||||| |||||     
T  39376351 tttgagacttttgaaacataaaggactaacttaggaaatttgtcaaattaaaaagacctatttgaaacgtttgaaacttaaaggactaacttggaaattc 39376450  T
Q  533 tgtcaa 538  Q
    ||||||    
T  39376451 tgtcaa 39376456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 490 - 567
Target Start/End: Complemental strand, 20535565 - 20535487
Alignment:
Q  490 ctatttaaaacttttgaaactt-aaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    |||||| |||| |||||||||| ||| ||||||||||| |||| ||| |||||||||||| | ||| ||||||||||||    
T  20535565 ctatttgaaacatttgaaactttaaatgactaacttgataattatgttaaactaaaaggatctaacgtggtatttggcc 20535487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 417 - 487
Target Start/End: Complemental strand, 30907149 - 30907079
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaaga 487  Q
    ||||||||| ||| || ||||||| || |||| ||||| || ||||||||||||| |||||||||||||||    
T  30907149 aaactaaaaggacctaattgaaactttcgaaacttaaaagactaacttgagaattctgtcaaactaaaaga 30907079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 309 - 386
Target Start/End: Original strand, 20535831 - 20535908
Alignment:
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaa 386  Q
    |||| ||||||| |||||||||||| ||  | |||||||||||||||| || ||||||||||||| || |||| ||||    
T  20535831 ttttaacaccctcgagcttttaaaaggctacattttgatccaagtcaataacttaacggctacatcaacatcagttaa 20535908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 257
Target Start/End: Complemental strand, 42117059 - 42117002
Alignment:
Q  200 tcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactat 257  Q
    |||||||||| ||||||||| || ||||| ||||||| ||||||||||||||| ||||    
T  42117059 tcatttatagggctagaaaggcagctattgacaacaaaaaatgtctttctagccctat 42117002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 417 - 485
Target Start/End: Complemental strand, 31264000 - 31263932
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaa 485  Q
    ||||||||| ||| || ||||||| || |||| ||||||||||||||||  |||| |||||||||||||    
T  31264000 aaactaaaaggacctaattgaaactttcgaaacttaaaggattaacttggaaattctgtcaaactaaaa 31263932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 501 - 549
Target Start/End: Original strand, 34336226 - 34336274
Alignment:
Q  501 ttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggac 549  Q
    |||||||||||||| || ||||||||||||| |||||||||| ||||||    
T  34336226 ttttgaaacttaaaagattaacttgaaaattctgtcaaactacaaggac 34336274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 484 - 548
Target Start/End: Complemental strand, 39301444 - 39301381
Alignment:
Q  484 aagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaagga 548  Q
    ||||| |||||||||| || ||||| ||||||||||||||||| |||| ||| ||||||||||||    
T  39301444 aagaacctatttaaaatttatgaaa-ttaaaggactaacttgataattatgtgaaactaaaagga 39301381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 502 - 545
Target Start/End: Original strand, 20535967 - 20536010
Alignment:
Q  502 tttgaaacttaaaggactaacttgaaaattttgtcaaactaaaa 545  Q
    ||||||||||||| ||||||||||| |||| |||||||||||||    
T  20535967 tttgaaacttaaaagactaacttgagaattatgtcaaactaaaa 20536010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 452 - 567
Target Start/End: Complemental strand, 32341493 - 32341378
Alignment:
Q  452 aaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggacca 551  Q
    |||||| ||| |||| |||| | ||||||||||||||  || || ||| ||| |||| |||||||| |||||| | |||  |||||||||||||| ||||    
T  32341493 aaaggactaatttgaaaattctttcaaactaaaagaacttaattcaaattttcgaaatttaaaggattaacttaagaatcctgtcaaactaaaagaacca 32341394  T
Q  552 aacatggtatttggcc 567  Q
    ||  || |||||||||    
T  32341393 aaagtgatatttggcc 32341378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 445 - 488
Target Start/End: Complemental strand, 32341440 - 32341397
Alignment:
Q  445 gaaatttaaaggattaacttgagaattatgtcaaactaaaagaa 488  Q
    |||||||||||||||||||| |||||  ||||||||||||||||    
T  32341440 gaaatttaaaggattaacttaagaatcctgtcaaactaaaagaa 32341397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 417 - 488
Target Start/End: Original strand, 37543128 - 37543199
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaa 488  Q
    ||||||||| |||||| ||||||| ||  ||| ||||| || |||||||| |||| ||||||||||||||||    
T  37543128 aaactaaaaggacttaattgaaactttcaaaacttaaaagactaacttgaaaattctgtcaaactaaaagaa 37543199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 506 - 553
Target Start/End: Complemental strand, 41265155 - 41265108
Alignment:
Q  506 aaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaa 553  Q
    ||||| ||| |||||||||||||||| ||||||||||||| |||||||    
T  41265155 aaactaaaaagactaacttgaaaattatgtcaaactaaaatgaccaaa 41265108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 500 - 550
Target Start/End: Complemental strand, 34429793 - 34429743
Alignment:
Q  500 cttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggacc 550  Q
    |||||||||||||||||| ||||||| ||||| | ||||| ||||||||||    
T  34429793 cttttgaaacttaaaggattaacttggaaattctttcaaattaaaaggacc 34429743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 500 - 545
Target Start/End: Complemental strand, 5117008 - 5116963
Alignment:
Q  500 cttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaa 545  Q
    ||||||||| |||||||| |||||||  ||||||||||||||||||    
T  5117008 cttttgaaagttaaaggagtaacttgtgaattttgtcaaactaaaa 5116963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 476 - 545
Target Start/End: Original strand, 19081055 - 19081124
Alignment:
Q  476 caaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaa 545  Q
    ||||||||||  | ||| || ||||||| |||||||||| |||||| |||| |||| |||||||||||||    
T  19081055 caaactaaaaacacctaattgaaactttcgaaacttaaaagactaatttgagaattctgtcaaactaaaa 19081124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 117; Significance: 3e-59; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 184 - 502
Target Start/End: Complemental strand, 31247505 - 31247178
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactg 283  Q
    |||| |||| ||||| ||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||| |||| || | ||    
T  31247505 taattgtcacaaatgatcaattatagtgctagaaaggcagctatttacaacaacaaatgtctttctagcactattaaacgacatttacagtgctagaatg 31247406  T
Q  284 at-atttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaa 382  Q
    || ||||||   |||| || |||| ||||||||||| |||| |||||||||  || ||||||||||||||||||||| ||||||||||||| |  |||||    
T  31247405 atcatttgtaaccattaaacgtaatattttgacaccatggaacttttaaaagacaacgttttgatccaagtcaacaacttaacggctacatcagcatcaa 31247306  T
Q  383 ttaattattaactcac---------aacagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattat 473  Q
    ||||||| ||||| ||         |||||  ||||  ||||| |||||| | |||||||||||||| ||||||| ||||| || ||||||||||||| |    
T  31247305 ttaattaataactgacagcaggagtaacagtaaaatagtttatcaactaataggacttatttgaaacttttgaaacttaaa-gactaacttgagaatttt 31247207  T
Q  474 gtcaaactaaaagaatctatttaaaactt 502  Q
    ||||||||||||| || ||||||||||||    
T  31247206 gtcaaactaaaaggatatatttaaaactt 31247178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 184 - 393
Target Start/End: Original strand, 53783138 - 53783348
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactg 283  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||| || |||||||||||| || | ||    
T  53783138 taatggtcacaaatgatcatttatagtgctagaaagacaactatttacaactacaaatatctttctaacactattaaacaacatttatagtgctagaatg 53783237  T
Q  284 at-atttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaa 382  Q
    || |||||||   ||| || |||| ||||||||||| ||||||||||||||||||| ||||||||| || ||||||| |||||| |||||| || ||||     
T  53783238 atcatttgtgactattaaacgtaatattttgacaccttggagcttttaaaatgcagtgttttgatctaaatcaacaacttaacgactacatcaacatcag 53783337  T
Q  383 ttaattattaa 393  Q
    |||||||||||    
T  53783338 ttaattattaa 53783348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 184 - 394
Target Start/End: Complemental strand, 3087418 - 3087207
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactg 283  Q
    ||||||| | ||||| ||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||| |  |||||||||||| || |  |    
T  3087418 taatggttacaaatgatcatttatagtgctagaaaggtagctatttacaacaacaaatgtctttctagcactattaaataacatttatagtgttagaacg 3087319  T
Q  284 at-atttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaa 382  Q
    || |||| ||  |||| || ||||| |||||||||| | ||| |||||||||||||||||||||||||||||||||| |||| |||||||| |  |||||    
T  3087318 atcatttatgaccattaaacgtaacgttttgacacctttgagattttaaaatgcagcgttttgatccaagtcaacaacttaaaggctacatcagcatcaa 3087219  T
Q  383 ttaattattaac 394  Q
    ||||||||||||    
T  3087218 ttaattattaac 3087207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 405 - 567
Target Start/End: Original strand, 31247620 - 31247782
Alignment:
Q  405 gaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaactttt 504  Q
    ||||| |||||| |||||||||||| |||||||||| ||||||| |||||| | ||||||| ||||| |||| ||||||||| | ||| || |||||||     
T  31247620 gaaataatttatcaactaaaatgacatatttgaaacttttgaaacttaaagcactaacttgggaattctgtccaactaaaaggacctaattgaaactttc 31247719  T
Q  505 gaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    ||||||||||||||||||||| ||||| ||||||| |||||||||||||  || |||||||||    
T  31247720 gaaacttaaaggactaacttggaaattctgtcaaattaaaaggaccaaaagtgatatttggcc 31247782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 444 - 549
Target Start/End: Complemental strand, 3087190 - 3087086
Alignment:
Q  444 tgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaa 543  Q
    ||||||||||| |||| ||||||||||| |||||||||||||| || |||||||||||||||||||||||| |||||||||||||||| | ||||| |||    
T  3087190 tgaaatttaaaagatttacttgagaattctgtcaaactaaaaggatttatttaaaacttttgaaacttaaa-gactaacttgaaaattctatcaaattaa 3087092  T
Q  544 aaggac 549  Q
    ||||||    
T  3087091 aaggac 3087086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 399 - 553
Target Start/End: Complemental strand, 4276289 - 4276135
Alignment:
Q  399 aacagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaa 498  Q
    ||||| |||||  ||||| |||||||||||  |||||||||| ||||||| |||||| | |||| | | ||||||||||||||||||  |  || || ||    
T  4276289 aacagtgaaatagtttatcaactaaaatgaactatttgaaacttttgaaacttaaagaactaacataaaaattatgtcaaactaaaaagacttaattgaa 4276190  T
Q  499 acttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaa 553  Q
    |||||  |||||||||| |||||||| ||||| ||||||||||||||||||||||    
T  4276189 actttcaaaacttaaagaactaacttaaaaatattgtcaaactaaaaggaccaaa 4276135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 303 - 563
Target Start/End: Complemental strand, 35555788 - 35555516
Alignment:
Q  303 gtaacattttgacaccctggagcttttaaaat--gcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaattattaactcacaa 400  Q
    ||||| |||| ||||||||||| ||||||||   | |||||||||||| |||||| ||| |||||||||| || || || | ||||||||||||| | |     
T  35555788 gtaacgttttaacaccctggagtttttaaaagaggaagcgttttgatctaagtcagcaacttaacggctatatcaacattagttaattattaactgatag 35555689  T
Q  401 cagaga---------aatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatct 491  Q
    ||| ||         |||  ||||| ||||||||||| ||||||||||| ||  |||||||| ||| |||||||| |||| |||||||||||||  || |    
T  35555688 cagggataacggtgaaatagtttatcaactaaaatgatttatttgaaactttcaaaatttaatggactaacttgataattctgtcaaactaaaatgattt 35555589  T
Q  492 atttaaaacttttgaaacttaaagga-ctaacttgaaaattttgtcaaactaaaaggaccaaacatggtattt 563  Q
    | || |||||||||||||||||| || ||||||||  |||| ||||||  |||||||||||||| || |||||    
T  35555588 aattgaaacttttgaaacttaaaagatctaacttgtgaattctgtcaatttaaaaggaccaaacgtgatattt 35555516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 285 - 395
Target Start/End: Complemental strand, 24707684 - 24707574
Alignment:
Q  285 tatttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaatt 384  Q
    ||||||||  |||| |||||| | |||||||||||| |||||||| ||| ||| | |||||||| || ||||||||||||||||||||| || |||||||    
T  24707684 tatttgtgaccattaaatgtagcgttttgacaccctcgagctttttaaaggcaacattttgatctaaatcaacaatttaacggctacatcaacatcaatt 24707585  T
Q  385 aattattaact 395  Q
    |||||||||||    
T  24707584 aattattaact 24707574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 463 - 564
Target Start/End: Complemental strand, 50530336 - 50530235
Alignment:
Q  463 ttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatt 562  Q
    ||||||||| |||||||||||||  | ||| |||| |||||||||||||||| |||||| ||||||||| |||||||||||||||| |||| ||| ||||    
T  50530336 ttgagaattctgtcaaactaaaatgacctaattaatacttttgaaacttaaaagactaagttgaaaattctgtcaaactaaaaggatcaaaaatgatatt 50530237  T
Q  563 tg 564  Q
    ||    
T  50530236 tg 50530235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 184 - 272
Target Start/End: Original strand, 4276399 - 4276486
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttata 272  Q
    ||||||||| ||||  ||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||| || |||||||||    
T  4276399 taatggtcacaaataatcatttatagtgctagaaagacagctatttacaacaacaaatg-cttcctagcactattaaacaacatttata 4276486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 303 - 403
Target Start/End: Complemental strand, 14629474 - 14629375
Alignment:
Q  303 gtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaattattaactcacaaca 402  Q
    |||||||||||||||||| |||||||||||| ||||||||||||| ||| ||||||| |||||||||||| ||  || | ||||||||||||| ||||||    
T  14629474 gtaacattttgacaccctagagcttttaaaaggcagcgttttgattcaaatcaacaacttaacggctaca-tagcattagttaattattaactgacaaca 14629376  T

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Target: chr3; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 286 - 373
Target Start/End: Original strand, 35555831 - 35555918
Alignment:
Q  286 atttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacat 373  Q
    ||||||| ||||| || ||| | |||||||||||| |||||||||||||| ||| ||||||||||||||||||| |||||||||||||    
T  35555831 atttgtgatcattaaacgtagcgttttgacacccttgagcttttaaaatgaagcattttgatccaagtcaacaacttaacggctacat 35555918  T

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Target: chr3; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 412 - 565
Target Start/End: Complemental strand, 21376707 - 21376554
Alignment:
Q  412 tttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaactt 511  Q
    ||||| |||||||||||| ||||| |||| ||||||| ||||||||  ||| ||| |||| | ||||||||||||||  || ||||||||||| ||| ||    
T  21376707 tttatcaactaaaatgacatatttaaaacttttgaaacttaaaggaccaacctgaaaattctatcaaactaaaagaacttaattaaaacttttaaaattt 21376608  T
Q  512 aaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttgg 565  Q
    ||| | ||||||| ||| ||  |||||| ||||||||| ||| ||| |||||||    
T  21376607 aaaagtctaacttaaaagttcagtcaaattaaaaggactaaaaatgatatttgg 21376554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 442 - 553
Target Start/End: Original strand, 3088106 - 3088217
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaact 541  Q
    ||||||| |||||||| ||||| |  ||| ||||||||||||||| |  || || ||||||| |||| |||||| | ||||||||||||| |||||||||    
T  3088106 tttgaaacttaaaggactaactaggaaatcatgtcaaactaaaaggacataattgaaactttcgaaatttaaagcattaacttgaaaattctgtcaaact 3088205  T
Q  542 aaaaggaccaaa 553  Q
    ||||||||||||    
T  3088206 aaaaggaccaaa 3088217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 467 - 566
Target Start/End: Original strand, 21377037 - 21377136
Alignment:
Q  467 gaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggc 566  Q
    |||||||||||||||||||  | ||| || ||||||| |||| |||||| | ||||||| ||||| |||||||||||||||||||||| || ||||||||    
T  21377037 gaattatgtcaaactaaaatgacctaattgaaactttcgaaatttaaagtattaacttggaaattctgtcaaactaaaaggaccaaacgtgttatttggc 21377136  T

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Target: chr3; HSP #16
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 309 - 386
Target Start/End: Original strand, 14629540 - 14629617
Alignment:
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaa 386  Q
    |||||||||||| |||||||||||| ||||| |||||||||||||||| || ||||||||||||| || |||| ||||    
T  14629540 ttttgacaccctcgagcttttaaaaggcagcattttgatccaagtcaataacttaacggctacatcaacatcagttaa 14629617  T

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Target: chr3; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 433 - 546
Target Start/End: Original strand, 54456799 - 54456912
Alignment:
Q  433 tttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattt 532  Q
    |||||||| ||||||| |||||||| |||||||  |||||||||||| |||||| | |||||| |||||||||| |||||| ||| ||| ||| || ||     
T  54456799 tttgaaacttttgaaacttaaaggactaacttggaaattatgtcaaattaaaaggacctatttgaaacttttgatacttaagggaataatttggaagttc 54456898  T
Q  533 tgtcaaactaaaag 546  Q
    | ||||||||||||    
T  54456899 tatcaaactaaaag 54456912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 502 - 567
Target Start/End: Complemental strand, 14629336 - 14629271
Alignment:
Q  502 tttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    ||||||||||||||||||||||||  |||| ||||||| |||||||||||||| | ||||||||||    
T  14629336 tttgaaacttaaaggactaacttgggaattctgtcaaagtaaaaggaccaaacgtagtatttggcc 14629271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 491 - 548
Target Start/End: Complemental strand, 31247248 - 31247192
Alignment:
Q  491 tatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaagga 548  Q
    ||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  31247248 tatttgaaacttttgaaacttaaag-actaacttgagaattttgtcaaactaaaagga 31247192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 497 - 550
Target Start/End: Original strand, 54456803 - 54456856
Alignment:
Q  497 aaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggacc 550  Q
    ||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  54456803 aaacttttgaaacttaaaggactaacttggaaattatgtcaaattaaaaggacc 54456856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 477 - 548
Target Start/End: Original strand, 5505728 - 5505800
Alignment:
Q  477 aaactaaaagaatctatttaaaacttttgaaactt-aaaggactaacttgaaaattttgtcaaactaaaagga 548  Q
    |||||||||| |||||||||||||||||||||||| |||||||||| ||  ||||| |||||||| |||||||    
T  5505728 aaactaaaaggatctatttaaaacttttgaaacttaaaaggactaattttgaaattatgtcaaacaaaaagga 5505800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 421 - 553
Target Start/End: Original strand, 54456847 - 54456979
Alignment:
Q  421 taaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggacta 520  Q
    ||||| ||| |||||||||| ||||| | |||| ||| ||| |||  | || | |||||||||||||||||| || || ||||  ||||||||||| |||    
T  54456847 taaaaggacctatttgaaacttttgatacttaagggaataatttggaagttctatcaaactaaaagaatctaattgaagctttctaaacttaaagggcta 54456946  T
Q  521 acttgaaaattttgtcaaactaaaaggaccaaa 553  Q
    |||||| |||| | | |||||||||||||||||    
T  54456947 acttgagaattctattaaactaaaaggaccaaa 54456979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 502 - 549
Target Start/End: Complemental strand, 14964784 - 14964737
Alignment:
Q  502 tttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggac 549  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||    
T  14964784 tttgaaacttaaaagactaacttgaaaattctgtcaaactaaaaggac 14964737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 478 - 549
Target Start/End: Complemental strand, 24707542 - 24707471
Alignment:
Q  478 aactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggac 549  Q
    ||||||||  || |||||||||||||  |||||||||||||||||||| ||||| ||| |||||||||||||    
T  24707542 aactaaaatgatatatttaaaactttgaaaacttaaaggactaacttggaaattctgtaaaactaaaaggac 24707471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 417 - 486
Target Start/End: Original strand, 3088141 - 3088210
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaag 486  Q
    ||||||||| ||| || ||||||| || ||||||||||| |||||||||| |||| ||||||||||||||    
T  3088141 aaactaaaaggacataattgaaactttcgaaatttaaagcattaacttgaaaattctgtcaaactaaaag 3088210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 417 - 486
Target Start/End: Original strand, 21377047 - 21377116
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaag 486  Q
    ||||||||||||| || ||||||| || ||||||||||| |||||||||  |||| ||||||||||||||    
T  21377047 aaactaaaatgacctaattgaaactttcgaaatttaaagtattaacttggaaattctgtcaaactaaaag 21377116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 21376755 - 21376803
Alignment:
Q  134 atgtagccactacgttgttgacttgaattaaaatgttgtcttttaaaag 182  Q
    ||||||||  || ||||||||||||||||||||||||||||||||||||    
T  21376755 atgtagccgttaagttgttgacttgaattaaaatgttgtcttttaaaag 21376803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 502 - 553
Target Start/End: Original strand, 35555987 - 35556038
Alignment:
Q  502 tttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaa 553  Q
    |||||||||||||||| |||||||  ||||||| ||||||||||||||||||    
T  35555987 tttgaaacttaaaggattaacttgggaattttgccaaactaaaaggaccaaa 35556038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 502 - 564
Target Start/End: Original strand, 50530397 - 50530459
Alignment:
Q  502 tttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttg 564  Q
    |||||||||||||||||||||||  |||||  || |||||||||||| |||| ||||||||||    
T  50530397 tttgaaacttaaaggactaacttagaaattaagtgaaactaaaaggatcaaaaatggtatttg 50530459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 309 - 386
Target Start/End: Complemental strand, 4276388 - 4276311
Alignment:
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaa 386  Q
    |||||||||||| |||||||||||| ||| | |||||||| || ||||||| ||||| ||||||| || |||| ||||    
T  4276388 ttttgacaccctcgagcttttaaaaggcaccattttgatctaaatcaacaacttaaccgctacatcaacatcagttaa 4276311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 442 - 563
Target Start/End: Original strand, 4276629 - 4276741
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaact 541  Q
    ||||||| |||||||| ||||||| ||||| |||||||||||||  ||||| ||         ||||||||||||| | | |||  |||| |||||||||    
T  4276629 tttgaaacttaaaggactaacttgggaattctgtcaaactaaaatgatctaatt---------gaaacttaaaggatttatttgggaattctgtcaaact 4276719  T
Q  542 aaaaggaccaaacatggtattt 563  Q
    ||||| ||||||||||||||||    
T  4276720 aaaagtaccaaacatggtattt 4276741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 309 - 366
Target Start/End: Complemental strand, 53783128 - 53783071
Alignment:
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacg 366  Q
    |||||||||||| |  ||||||||||||||| ||||||||||| ||||||| ||||||    
T  53783128 ttttgacaccctcggtcttttaaaatgcagcattttgatccaaatcaacaacttaacg 53783071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 491 - 564
Target Start/End: Complemental strand, 54456733 - 54456660
Alignment:
Q  491 tatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttg 564  Q
    ||||| ||||||| |||||||||| |||||| ||  ||||| |||||||||||||||| |||| ||| ||||||    
T  54456733 tatttgaaactttcgaaacttaaatgactaatttcgaaattctgtcaaactaaaaggatcaaaaatgatatttg 54456660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 123
Target Start/End: Original strand, 4276271 - 4276302
Alignment:
Q  92 gataaactatttcactgttacccctgctgtca 123  Q
    ||||||||||||||||||||||||||||||||    
T  4276271 gataaactatttcactgttacccctgctgtca 4276302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 182
Target Start/End: Original strand, 31247304 - 31247363
Alignment:
Q  123 aattgatgctcatgtagccactacgttgttgacttgaattaaaatgttgtcttttaaaag 182  Q
    |||||||||| ||||||||  || |||||||||||| || |||| |||||||||||||||    
T  31247304 aattgatgctgatgtagccgttaagttgttgacttggatcaaaacgttgtcttttaaaag 31247363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 309 - 395
Target Start/End: Original strand, 21376891 - 21376976
Alignment:
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaattattaact 395  Q
    ||||| |||||| ||||||||||||  || |||||||||||||| |||||| |||| || ||||| ||  ||| |||||||||||||    
T  21376891 ttttggcaccctagagcttttaaaagacaacgttttgatccaagacaacaacttaa-ggatacatcaacctcagttaattattaact 21376976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 506 - 567
Target Start/End: Original strand, 18745502 - 18745563
Alignment:
Q  506 aaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    |||||||||| ||||| |||| |||||| ||||| | ||||||||||| || ||||||||||    
T  18745502 aaacttaaagtactaatttgataattttatcaaatttaaaggaccaaaaattgtatttggcc 18745563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 309 - 386
Target Start/End: Complemental strand, 21376819 - 21376742
Alignment:
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaa 386  Q
    |||||||||| | ||||||||||||  || | |||| || ||||||||||| ||||||||||||| || |||| ||||    
T  21376819 ttttgacaccatcgagcttttaaaagacaacattttaattcaagtcaacaacttaacggctacatcaacatcagttaa 21376742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 3e-56; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 184 - 486
Target Start/End: Complemental strand, 52568060 - 52567750
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactg 283  Q
    ||||||||| ||||| |||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||  |||| |||||||||| |||| ||    
T  52568060 taatggtcacaaatgatcatttatagtgatagaaagacaaccatttacaacaataaatgtctttctagcactattgaacgatatttatagtgctaaaatg 52567961  T
Q  284 atatttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaat 383  Q
    |||||||||  |||| ||  |||| ||||||||||||| || ||||||||  || | |||||||||||| ||| || |||||| |||||| || ||||||    
T  52567960 atatttgtgaccatt-aacataacgttttgacaccctgaagtttttaaaagacaacattttgatccaagacaataacttaacgactacatcaacatcaat 52567862  T
Q  384 taattattaactcac---------aacagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatg 474  Q
    |||||||||||| ||         ||||| |||||  ||||| |||||||||||| ||||| |||| ||||||| ||||| || |||||| |||||| ||    
T  52567861 taattattaactgacagcaggagtaacagtgaaatagtttatcaactaaaatgacctatttaaaacttttgaaacttaaatgactaacttaagaattctg 52567762  T
Q  475 tcaaactaaaag 486  Q
    ||||||||||||    
T  52567761 tcaaactaaaag 52567750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 184 - 553
Target Start/End: Complemental strand, 31229629 - 31229254
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactg 283  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||  ||||||||| ||||| ||||||||||||||| || | ||    
T  31229629 taatggtcacaaatgatcatttatagtgctagaaagacaactatttacaacaataaatgcatttctagcattattaaacgacatttatagtgctagaatg 31229530  T
Q  284 at-atttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaa 382  Q
    || |||||||   ||| || ||||| ||||| |||||| ||| ||||||||   ||| ||||| |||||   ||||| |||||| |||||| |  |||||    
T  31229529 atcatttgtgacgattaaacgtaacgttttgccaccct-gag-ttttaaaagttagcattttggtccaa---aacaagttaacgactacatcagcatcaa 31229435  T
Q  383 ttaattattaactcacaacaga---------gaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattat 473  Q
    ||||||||||||| ||| ||||         |||||  ||||| ||||||||  || |||||||||| ||||||| ||||| || ||||||||||||| |    
T  31229434 ttaattattaactgacagcagaggtaacggtgaaatagtttatcaactaaaagaacctatttgaaacttttgaaacttaaatgactaacttgagaattct 31229335  T
Q  474 gtcaaactaaaagaatctatttaaaacttttgaaactt-aaaggactaacttgaaaattttgtcaaactaaaaggaccaaa 553  Q
     |||||||||||  | |||  | ||||||| ||||||| |||||||||| ||||||||| ||||||| ||||| |||||||    
T  31229334 atcaaactaaaaagacctaagtgaaactttcgaaacttaaaaggactaatttgaaaattctgtcaaattaaaaagaccaaa 31229254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 208 - 564
Target Start/End: Original strand, 30542907 - 30543254
Alignment:
Q  208 agtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactgatatttgtgttcattgaatgtaac 307  Q
    ||||||||||||  |  ||||||||||||||||||||||||||||| ||||| |||| |||||||||| |||| ||||||||| |  |||| || ||||     
T  30542907 agtgctagaaaggtagttatttacaacaacaaatgtctttctagcattattaaacgatatttatagtgttaaaatgatatttgcgaccattaaacgtaat 30543006  T
Q  308 attttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaattattaactcacaaca----- 402  Q
     |||||||||| || |||||||||||  || |||||||||  |||||||||||||||| ||| ||  ||||||||||||||||||||| ||||||         
T  30543007 gttttgacaccatgaagcttttaaaagtcaacgttttgatttaagtcaacaatttaacagctccaacaatatcaattaattattaactgacaacaggggt 30543106  T
Q  403 ----gagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaa 498  Q
        | |||||  ||||| || |||||||| |||         |||||||||||||||| |||||||| |||| ||||||||||||||||  ||||||      
T  30543107 aacggtgaaatagtttatcaattaaaatgattta---------tttgaaatttaaaggactaacttgataattttgtcaaactaaaagaaaatattta-- 30543195  T
Q  499 acttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttg 564  Q
           |||||||||||| ||| ||| ||||||||||||| ||||||||||||||||| ||||||    
T  30543196 -------aaacttaaaggattaatttggaaattttgtcaaattaaaaggaccaaacatgatatttg 30543254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 309 - 562
Target Start/End: Complemental strand, 52181968 - 52181706
Alignment:
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaattattaactcacaacagag--- 405  Q
    ||||||||||||||||||||||||| ||| | |||||||| |||||||||| |||||| |||||| || |||||||||||||||| ||||| ||| |       
T  52181968 ttttgacaccctggagcttttaaaaggcaacattttgatcaaagtcaacaacttaacgactacatcaacatcaattaattattaattcacagcagcggta 52181869  T
Q  406 ------aaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaa 499  Q
          ||||  ||||| || ||||||||| | |||||||| ||||||| |||||||| ||||||| ||||| |||||||||||||| |  |  || |||    
T  52181868 acggtgaaatagtttatcaattaaaatgacatgtttgaaacttttgaaacttaaaggactaacttgggaattctgtcaaactaaaaggacatgattgaaa 52181769  T
Q  500 cttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatt 562  Q
    ||||  ||| |||||| |||||||||| ||||||||||||||||||||| |||| ||||||||    
T  52181768 ctttcaaaatttaaagaactaacttgagaattttgtcaaactaaaaggatcaaaaatggtatt 52181706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 200 - 564
Target Start/End: Complemental strand, 8408707 - 8408340
Alignment:
Q  200 tcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcact--attagacgacatttatagtgataaactgat-atttgtgttca 296  Q
    ||||||||| |||||||||||||  ||||||||||||||||| ||||||| ||||   |||| | ||||||||||||| || | |||| |||||||  ||    
T  8408707 tcatttataatgctagaaagacagttatttacaacaacaaatatctttcttgcacacaattaaatgacatttatagtgctagaatgatcatttgtgacca 8408608  T
Q  297 ttgaatgtaacattttgacaccctgga-gcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaattattaact 395  Q
    || ||  |||| |||||||||| | || |||| ||||| ||| | ||||||| ||||||||||| |||| |||||| | || ||   |||||||||||||    
T  8408607 ttaaacataacgttttgacacctttgaagcttgtaaaaggcaacattttgattcaagtcaacaacttaaaggctacctcaacattggttaattattaact 8408508  T
Q  396 cac--------aacagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaaga 487  Q
     ||        ||| | |||||   |||| ||||||||||||||||||||||| ||| ||| ||||| || | ||||||||||| ||||||||||||||     
T  8408507 gactgtaggttaacggtgaaatagcttatcaactaaaatgacttatttgaaacttttcaaacttaaaagacttacttgagaattttgtcaaactaaaagg 8408408  T
Q  488 atctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttg 564  Q
    |||||         |||||||||||||| ||||||||| |||||||||||||||||||||||||||| || ||||||    
T  8408407 atcta---------tttgaaacttaaagaactaacttggaaattttgtcaaactaaaaggaccaaacttgatatttg 8408340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 412 - 548
Target Start/End: Original strand, 26329930 - 26330066
Alignment:
Q  412 tttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaactt 511  Q
    ||||| |||||||||||| |||||||||| ||||||| ||||| || ||||||| |||||||||||||||||||| | |||||| |||||||||||||||    
T  26329930 tttatcaactaaaatgacctatttgaaacttttgaaacttaaatgactaacttgggaattatgtcaaactaaaaggacctatttgaaacttttgaaactt 26330029  T
Q  512 aaaggactaacttgaaaattttgtcaaactaaaagga 548  Q
    ||||||||||||||  |||| ||| ||||||||||||    
T  26330030 aaaggactaacttgggaattctgtaaaactaaaagga 26330066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 416 - 563
Target Start/End: Original strand, 43098399 - 43098546
Alignment:
Q  416 taaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaag 515  Q
    |||||||||||||| |||||||||| ||||||| |||||||| ||||||| ||||| |||||||||||||| | ||| || ||||||| |||||||||||    
T  43098399 taaactaaaatgacatatttgaaacttttgaaacttaaaggactaacttgggaattttgtcaaactaaaaggacctaattgaaactttcgaaacttaaag 43098498  T
Q  516 gactaacttgaaaattttgtcaaactaaaaggaccaaacatggtattt 563  Q
     ||||| ||  ||||| ||||||||||||||||||||| |||||||||    
T  43098499 aactaagttagaaattctgtcaaactaaaaggaccaaaaatggtattt 43098546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 417 - 567
Target Start/End: Original strand, 26329995 - 26330145
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaagg 516  Q
    ||||||||| ||| |||||||||| ||||||| |||||||| ||||||| ||||| ||| |||||||||| ||||| || |||||||  |||||||||||    
T  26329995 aaactaaaaggacctatttgaaacttttgaaacttaaaggactaacttgggaattctgtaaaactaaaaggatctaattgaaactttcaaaacttaaagg 26330094  T
Q  517 actaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    |||||||||| |||| ||||||||||||||||| |||  ||||||||||||    
T  26330095 actaacttgagaattctgtcaaactaaaaggactaaaagtggtatttggcc 26330145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 194 - 373
Target Start/End: Original strand, 52866119 - 52866298
Alignment:
Q  194 aaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactgat-atttgtg 292  Q
    ||||| |||||||||||||| ||||||||| |||||||||||||||||||| ||||| |||||||| ||||||||||||||| || | |||| |||||||    
T  52866119 aaatgatcatttatagtgctggaaagacaattatttacaacaacaaatgtcgttctaacactattaaacgacatttatagtgctagaatgatcatttgtg 52866218  T
Q  293 ttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacat 373  Q
       ||| ||  |||  ||||||||||||||||||||||||| | | ||||||||||||||| ||||| ||||||| |||||    
T  52866219 acgatt-aaactaatgttttgacaccctggagcttttaaaaagaaacgttttgatccaagtgaacaacttaacgggtacat 52866298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 206 - 515
Target Start/End: Original strand, 5387388 - 5387706
Alignment:
Q  206 atagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactgat-atttgtgttcattgaatgt 304  Q
    |||||||||||||  ||||||||||||||||||||| |||||||| |||||||| |||||||||| ||||||| | |||| |||| |    ||| |||||    
T  5387388 atagtgctagaaaagcaactatttacaacaacaaatatctttctatcactattaaacgacatttacagtgatagaatgatcatttataactattaaatgt 5387487  T
Q  305 aacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaattattaactcac------ 398  Q
    ||| ||||||||   || ||||||||||| | |||| |||||| ||| |||||||||||| | |||||| || |||| ||||||||||||| ||          
T  5387488 aactttttgacatattgaagcttttaaaaggaagcgatttgatacaaatcaacaatttaaagactacatcaacatcagttaattattaactaacagcagg 5387587  T
Q  399 ---aacagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctattt 495  Q
       ||| | ||||| |||||| || | |||  || |||||||||| ||| |||||||||||  | |||| |||||| ||||||||||||| ||| |||||    
T  5387588 ggtaacggtgaaataatttatcaagtgaaagtacatatttgaaacttttaaaatttaaaggtcttacttaagaattttgtcaaactaaaa-aatttattt 5387686  T
Q  496 aaaacttttgaaacttaaag 515  Q
     |||||| | ||||||||||    
T  5387687 gaaacttataaaacttaaag 5387706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 19681451 - 19681542
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtg 275  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||    
T  19681451 taatggtcacaaatgatcatttatagtgctagaaagacaactatttacaacaacaaatgcctttctagcactcttaaacgacatttatagtg 19681542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 457 - 567
Target Start/End: Complemental strand, 19631859 - 19631749
Alignment:
Q  457 attaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacat 556  Q
    ||||||||||||||| |||||||||||||| | ||| || ||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||| |    
T  19631859 attaacttgagaattctgtcaaactaaaaggacctaattgaaactttcgaaacttaaaggactaacttgagaattttgtcaaaataaaaggaccaaacgt 19631760  T
Q  557 ggtatttggcc 567  Q
    | |||||||||    
T  19631759 gatatttggcc 19631749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 417 - 567
Target Start/End: Original strand, 22025290 - 22025439
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaagg 516  Q
    |||||||||| || ||||||||||||||||| || |||||| ||||||| ||||| |||||||||||||||| ||| || ||||||| ||||||| ||||    
T  22025290 aaactaaaattacctatttgaaacctttgaactt-aaaggactaacttgggaattctgtcaaactaaaagaacctaattgaaactttcgaaacttcaagg 22025388  T
Q  517 actaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    |||||||||| |||| ||||||||||||| ||| |||  | ||||||||||    
T  22025389 actaacttgataattatgtcaaactaaaatgactaaaagttgtatttggcc 22025439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 442 - 550
Target Start/End: Original strand, 2788928 - 2789036
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaact 541  Q
    ||||||| ||||| || ||||||||||||| |||||||||||||  | |||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  2788928 tttgaaacttaaatgactaacttgagaattctgtcaaactaaaatgacctatttgaaacttttgaaacttaaaggactaacttgaaaattctgtcaaact 2789027  T
Q  542 aaaaggacc 550  Q
    |||| ||||    
T  2789028 aaaatgacc 2789036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 417 - 546
Target Start/End: Original strand, 2788963 - 2789092
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaagg 516  Q
    ||||||||||||| |||||||||| ||||||| |||||||| |||||||| |||| |||||||||||||  | ||| || ||||||   |||||||||||    
T  2788963 aaactaaaatgacctatttgaaacttttgaaacttaaaggactaacttgaaaattctgtcaaactaaaatgacctaattgaaacttccaaaacttaaagg 2789062  T
Q  517 actaacttgaaaattttgtcaaactaaaag 546  Q
    ||||| || |||||||||||||||||||||    
T  2789063 actaatttaaaaattttgtcaaactaaaag 2789092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 421 - 546
Target Start/End: Complemental strand, 9320142 - 9320017
Alignment:
Q  421 taaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggacta 520  Q
    ||||||||  |||||||||| ||||||||||||| || ||| ||||||||| ||||||||||||||||  || || ||||||| ||||||||||  ||||    
T  9320142 taaaatgatctatttgaaacttttgaaatttaaatgactaaattgagaattctgtcaaactaaaagaacttaattgaaactttcgaaacttaaaaaacta 9320043  T
Q  521 acttgaaaattttgtcaaactaaaag 546  Q
    |||||| |||||||||||||||||||    
T  9320042 acttgagaattttgtcaaactaaaag 9320017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 490 - 565
Target Start/End: Original strand, 42116069 - 42116144
Alignment:
Q  490 ctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttgg 565  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||    
T  42116069 ctatttaaaacttttgaaacttaaaggactaacttaaaaattttgtcaaactaaaatgaccaaaaatggtatttgg 42116144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 412 - 553
Target Start/End: Original strand, 8408843 - 8408984
Alignment:
Q  412 tttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaactt 511  Q
    ||||| |||||| ||||| |||||||||| ||||||| ||||| || |||||||| |||| ||||||||||||||||  |  || ||| ||| |||||||    
T  8408843 tttatcaactaagatgacctatttgaaacttttgaaacttaaatgactaacttgaaaattctgtcaaactaaaagaacatcattgaaattttcgaaactt 8408942  T
Q  512 aaaggactaacttgaaaattttgtcaaactaaaaggaccaaa 553  Q
    ||| ||||||||||| |||| ||||||||||||| |||||||    
T  8408943 aaatgactaacttgagaattatgtcaaactaaaatgaccaaa 8408984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 442 - 551
Target Start/End: Complemental strand, 41735923 - 41735814
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaact 541  Q
    |||||||||||||||| | |||||  |||| |||||||||||||| | |||||| |||||||||||||||||||||||||||||  |||| ||| |||||    
T  41735923 tttgaaatttaaaggactgacttggaaattctgtcaaactaaaaggacctatttgaaacttttgaaacttaaaggactaacttgggaattatgttaaact 41735824  T
Q  542 aaaaggacca 551  Q
    ||||||||||    
T  41735823 aaaaggacca 41735814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 442 - 563
Target Start/End: Original strand, 52183437 - 52183558
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaact 541  Q
    ||||||| |||||||| |  |||| ||||| ||||||||||||||   ||| || ||||||| |||||||||||||||||||||| |||||||| |||||    
T  52183437 tttgaaacttaaaggactggcttgggaattctgtcaaactaaaagggcctaattgaaactttcgaaacttaaaggactaacttgagaattttgtaaaact 52183536  T
Q  542 aaaaggaccaaacatggtattt 563  Q
    ||||||||||||| ||||||||    
T  52183537 aaaaggaccaaacgtggtattt 52183558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 436 - 544
Target Start/End: Complemental strand, 35046545 - 35046437
Alignment:
Q  436 gaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgt 535  Q
    ||||| ||||||| |||||||| ||| ||  ||||| |||||||||||||| ||||| |||||||||| ||||||||||||||||| ||||||||| |||    
T  35046545 gaaacttttgaaacttaaaggactaatttaggaattctgtcaaactaaaaggatctaattaaaactttcgaaacttaaaggactaaattgaaaattatgt 35046446  T
Q  536 caaactaaa 544  Q
    |||||||||    
T  35046445 caaactaaa 35046437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 442 - 550
Target Start/End: Original strand, 43098365 - 43098473
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaact 541  Q
    ||||||| |||||||| ||||||| ||||| ||| |||||||||  |  ||||| |||||||||||||||||||||||||||||  ||||||||||||||    
T  43098365 tttgaaacttaaaggactaacttgggaattctgttaaactaaaatgacatatttgaaacttttgaaacttaaaggactaacttgggaattttgtcaaact 43098464  T
Q  542 aaaaggacc 550  Q
    |||||||||    
T  43098465 aaaaggacc 43098473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 417 - 563
Target Start/End: Complemental strand, 41735888 - 41735743
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaagg 516  Q
    ||||||||| ||| |||||||||| ||||||| |||||||| ||||||| ||||||||| |||||||||| | | | || |||||||  ||||| ||||     
T  41735888 aaactaaaaggacctatttgaaacttttgaaacttaaaggactaacttgggaattatgttaaactaaaaggacc-agttgaaactttcaaaactaaaaga 41735790  T
Q  517 actaacttgaaaattttgtcaaactaaaaggaccaaacatggtattt 563  Q
    |||||||||| ||| |||| |||||||||||||||||  ||||||||    
T  41735789 actaacttgagaatcttgttaaactaaaaggaccaaaagtggtattt 41735743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 442 - 567
Target Start/End: Complemental strand, 52866067 - 52865942
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaact 541  Q
    ||||||| |||||||| ||  ||||| ||| ||||||||||||||||  || || |||||||  ||||||||||||||||||||| |||| |||||||||    
T  52866067 tttgaaacttaaaggactagattgagcattttgtcaaactaaaagaacataatttaaactttcaaaacttaaaggactaacttgagaattctgtcaaact 52865968  T
Q  542 aaaaggaccaaacatggtatttggcc 567  Q
    |||||||| |||  ||||||||||||    
T  52865967 aaaaggacaaaaagtggtatttggcc 52865942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 442 - 546
Target Start/End: Complemental strand, 2909286 - 2909182
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaact 541  Q
    |||||||||||||||| ||||||||||||| ||| |||||||||||| ||| || | ||||| ||||||||||| |||||||||| |||| ||| |||||    
T  2909286 tttgaaatttaaaggactaacttgagaattctgtaaaactaaaagaacctaattgacactttcgaaacttaaagaactaacttgagaattctgtgaaact 2909187  T
Q  542 aaaag 546  Q
    |||||    
T  2909186 aaaag 2909182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 412 - 548
Target Start/End: Complemental strand, 5387267 - 5387131
Alignment:
Q  412 tttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaactt 511  Q
    ||||| |||||||| ||  |||||||||| ||||||| |||||||  ||||||| ||||| |||||||||||||  || || || |||||||| ||||||    
T  5387267 tttatcaactaaaaagatctatttgaaacttttgaaacttaaagggctaacttgggaattctgtcaaactaaaatgatataattgaaacttttaaaactt 5387168  T
Q  512 aaaggactaacttgaaaattttgtcaaactaaaagga 548  Q
    |||||||||||||  |||||  |||||||||||||||    
T  5387167 aaaggactaacttagaaattcagtcaaactaaaagga 5387131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 449 - 548
Target Start/End: Complemental strand, 2788894 - 2788795
Alignment:
Q  449 tttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaagga 548  Q
    ||||||| | ||||||||||||| |||||||||||||| | ||| || ||||||| |||||||||||||||||||||| |||||  ||||||||||||||    
T  2788894 tttaaagtactaacttgagaattctgtcaaactaaaaggacctaattgaaactttcgaaacttaaaggactaacttgagaatttcatcaaactaaaagga 2788795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 412 - 564
Target Start/End: Complemental strand, 43098319 - 43098171
Alignment:
Q  412 tttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaactt 511  Q
    ||||| |||||||| |||||||||||||| ||||||| ||    || ||||||  ||| | ||  |||||||||| | ||| || |||||||  ||||||    
T  43098319 tttatcaactaaaaggacttatttgaaacttttgaaactt----gactaacttcggaactctggtaaactaaaaggacctaattgaaactttcaaaactt 43098224  T
Q  512 aaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttg 564  Q
    |||||||||||||  |||||||||||||||||||||||||||  |||||||||    
T  43098223 aaaggactaacttagaaattttgtcaaactaaaaggaccaaaagtggtatttg 43098171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 490 - 564
Target Start/End: Complemental strand, 52567806 - 52567732
Alignment:
Q  490 ctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttg 564  Q
    ||||||||||||||||||||||||| ||||||||| | |||| |||||||||||||||||||||| || ||||||    
T  52567806 ctatttaaaacttttgaaacttaaatgactaacttaagaattctgtcaaactaaaaggaccaaacgtgatatttg 52567732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 446 - 563
Target Start/End: Original strand, 23085224 - 23085340
Alignment:
Q  446 aaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaa 545  Q
    |||||||||||| ||| |||| |||| | | ||||||||||| |||| || |||||||||||||||||| ||||||||| ||| || |||||||||||||    
T  23085224 aaatttaaaggactaatttgaaaattctataaaactaaaagattctaattgaaacttttgaaacttaaa-gactaacttaaaatttctgtcaaactaaaa 23085322  T
Q  546 ggaccaaacatggtattt 563  Q
    | |||||| ||| |||||    
T  23085323 gaaccaaaaatgatattt 23085340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 188 - 271
Target Start/End: Complemental strand, 19632104 - 19632021
Alignment:
Q  188 ggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttat 271  Q
    ||||| ||||| |||||||||||||||||||||||  |||||||||||||||||| |||||||| | ||||| ||||| |||||    
T  19632104 ggtcacaaatgatcatttatagtgctagaaagacatatatttacaacaacaaatgcctttctagtattattaaacgacgtttat 19632021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 502 - 549
Target Start/End: Original strand, 44916324 - 44916371
Alignment:
Q  502 tttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggac 549  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  44916324 tttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggac 44916371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 501 - 564
Target Start/End: Original strand, 52866366 - 52866429
Alignment:
Q  501 ttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttg 564  Q
    |||||||||||||||||||||||||  |||| |||||||||||||| |||||||||||||||||    
T  52866366 ttttgaaacttaaaggactaacttgggaattctgtcaaactaaaagaaccaaacatggtatttg 52866429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 491 - 564
Target Start/End: Original strand, 19632248 - 19632320
Alignment:
Q  491 tatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttg 564  Q
    ||||||||||||||||||||||||| ||||| |||| |||| ||||||||||||||||||||| || |||||||    
T  19632248 tatttaaaacttttgaaacttaaag-actaatttgagaattctgtcaaactaaaaggaccaaaaatcgtatttg 19632320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 492 - 563
Target Start/End: Complemental strand, 2508323 - 2508252
Alignment:
Q  492 atttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtattt 563  Q
    |||| ||||||||||| ||||||||||||||||| ||||| |||||||||||||||| |||| || ||||||    
T  2508323 atttgaaacttttgaagcttaaaggactaacttggaaattctgtcaaactaaaaggatcaaaaatagtattt 2508252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 286 - 564
Target Start/End: Complemental strand, 19681464 - 19681184
Alignment:
Q  286 atttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaatta 385  Q
    |||||||  |||| || ||||| |||||||| ||| ||||||||||||  || | || |||||||||||||||| ||||||||||||| || |||| | |    
T  19681464 atttgtgaccattaaacgtaacgttttgacatcctcgagcttttaaaagacaacattatgatccaagtcaacaacttaacggctacatcaacatcagtca 19681365  T
Q  386 attattaactcacaaca---------gagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtc 476  Q
    |||| ||||| | | ||         | |||||  ||||| |||||||||||| |||||||| |||||| |  |||||||    ||||  ||||| ||||    
T  19681364 atta-taactgatagcaggggtaatggtgaaatagtttatcaactaaaatgacctatttgaatcctttgcaccttaaagg----acttcggaattctgtc 19681270  T
Q  477 aaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttg 564  Q
    |||||||||  ||||| || ||| ||| ||||||||||  |||||||||| ||||  ||||||||  |||||||||| ||||||||||    
T  19681269 aaactaaaatgatctaattgaaaatttcgaaacttaaaaaactaacttgagaattcggtcaaact--aaggaccaaaaatggtatttg 19681184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 431 - 545
Target Start/End: Original strand, 52568197 - 52568311
Alignment:
Q  431 tatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaat 530  Q
    |||||||||| ||||||| |||||||| | ||||||||||| | |||||||||||  | ||| || |||||||||||| |||||| ||||| |||  | |    
T  52568197 tatttgaaacttttgaaacttaaaggactgacttgagaattctatcaaactaaaatgacctaattgaaacttttgaaatttaaagtactaaattgggagt 52568296  T
Q  531 tttgtcaaactaaaa 545  Q
    | |||||||||||||    
T  52568297 tatgtcaaactaaaa 52568311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 461 - 546
Target Start/End: Original strand, 22025274 - 22025358
Alignment:
Q  461 acttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaag 546  Q
    ||||||||||| |||||||||||||  | |||||| |||| |||| |||||||||||||||||||  |||| ||||||||||||||    
T  22025274 acttgagaattctgtcaaactaaaattacctatttgaaacctttg-aacttaaaggactaacttgggaattctgtcaaactaaaag 22025358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 497 - 550
Target Start/End: Complemental strand, 26329879 - 26329826
Alignment:
Q  497 aaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggacc 550  Q
    |||||||||||||||||||| |||||||| ||||| ||||||||||||||||||    
T  26329879 aaacttttgaaacttaaagggctaacttggaaattctgtcaaactaaaaggacc 26329826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 492 - 545
Target Start/End: Original strand, 35046550 - 35046603
Alignment:
Q  492 atttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaa 545  Q
    ||||||||||||||||||||||||||||||||||  |||| |||||||||||||    
T  35046550 atttaaaacttttgaaacttaaaggactaacttgggaattatgtcaaactaaaa 35046603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 490 - 550
Target Start/End: Original strand, 26329948 - 26330008
Alignment:
Q  490 ctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggacc 550  Q
    |||||| |||||||||||||||||| ||||||||||  |||| ||||||||||||||||||    
T  26329948 ctatttgaaacttttgaaacttaaatgactaacttgggaattatgtcaaactaaaaggacc 26330008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 432 - 524
Target Start/End: Original strand, 35046550 - 35046642
Alignment:
Q  432 atttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaactt 524  Q
    |||| |||| ||||||| |||||||| ||||||| |||||||||||||||||||    | | |||||||||| ||||||||||| ||||||||    
T  35046550 atttaaaacttttgaaacttaaaggactaacttgggaattatgtcaaactaaaatggccaaattaaaactttcgaaacttaaagcactaactt 35046642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 309 - 486
Target Start/End: Original strand, 19632118 - 19632302
Alignment:
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaattattaactcacaacagagaaa 408  Q
    ||||||||| || |||||||||||||| | | ||||||||| ||||||||| ||||||||||||| || |||| |||| |    ||| ||||||| | ||    
T  19632118 ttttgacactcttgagcttttaaaatgtaacattttgatcctagtcaacaacttaacggctacatcaacatcagttaaatggagactaacaacagggtaa 19632217  T
Q  409 ---tga-----tttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaag 486  Q
       |||     ||||| |||||||||||| ||||| |||| ||||||| ||||| || ||| ||||||||| ||||||||||||||    
T  19632218 cagtgaagtagtttatcaactaaaatgacatatttaaaacttttgaaacttaaa-gactaatttgagaattctgtcaaactaaaag 19632302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 316 - 395
Target Start/End: Original strand, 52182046 - 52182125
Alignment:
Q  316 accctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaattattaact 395  Q
    ||||||||||||||||||  || | |||||||  |||||||||| ||||||||||||| || |||| |||||||||||||    
T  52182046 accctggagcttttaaaagacatcattttgatttaagtcaacaacttaacggctacatcaacatcagttaattattaact 52182125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 483 - 550
Target Start/End: Original strand, 52568189 - 52568256
Alignment:
Q  483 aaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggacc 550  Q
    |||| |||||||| ||||||||||||||||||||||| |||||| |||| | ||||||||||| ||||    
T  52568189 aaaggatctatttgaaacttttgaaacttaaaggactgacttgagaattctatcaaactaaaatgacc 52568256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 478 - 550
Target Start/End: Complemental strand, 22025188 - 22025116
Alignment:
Q  478 aactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggacc 550  Q
    ||||||||||| |||||| |||||||| || ||||| |||||||||| | |||| ||||||||||||| ||||    
T  22025188 aactaaaagaacctatttgaaactttttaatcttaacggactaacttaagaattctgtcaaactaaaatgacc 22025116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 417 - 485
Target Start/End: Original strand, 52568243 - 52568311
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaa 485  Q
    ||||||||||||| || ||||||| |||||||||||||| | ||| ||| || ||||||||||||||||    
T  52568243 aaactaaaatgacctaattgaaacttttgaaatttaaagtactaaattgggagttatgtcaaactaaaa 52568311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 478 - 545
Target Start/End: Original strand, 2508684 - 2508751
Alignment:
Q  478 aactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaa 545  Q
    ||||||||| |  |||||||||||||||||| |||||||| |||||| |||||||| ||||| |||||    
T  2508684 aactaaaaggacatatttaaaacttttgaaatttaaaggagtaacttaaaaattttatcaaattaaaa 2508751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 478 - 545
Target Start/End: Original strand, 35023969 - 35024036
Alignment:
Q  478 aactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaa 545  Q
    ||||||||| ||| ||| ||||||||| ||||||||| ||||||||||| |||| ||| |||||||||    
T  35023969 aactaaaaggatcaattaaaaacttttaaaacttaaaagactaacttgagaattgtgtaaaactaaaa 35024036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 417 - 486
Target Start/End: Complemental strand, 19631839 - 19631770
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaag 486  Q
    ||||||||| ||| || ||||||| || |||| |||||||| ||||||||||||| ||||||| ||||||    
T  19631839 aaactaaaaggacctaattgaaactttcgaaacttaaaggactaacttgagaattttgtcaaaataaaag 19631770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 405 - 485
Target Start/End: Original strand, 2508671 - 2508751
Alignment:
Q  405 gaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaa 485  Q
    ||||| |||||| |||||||| ||| ||||| |||| |||||||||||||||| |||||| | |||| | ||||| |||||    
T  2508671 gaaataatttatcaactaaaaggacatatttaaaacttttgaaatttaaaggagtaacttaaaaattttatcaaattaaaa 2508751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 309 - 373
Target Start/End: Original strand, 31229639 - 31229703
Alignment:
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacat 373  Q
    |||||||||||| |||||||| ||| | ||| ||||||| ||||||||||| |||||| ||||||    
T  31229639 ttttgacaccctcgagcttttgaaaggaagcattttgattcaagtcaacaacttaacgactacat 31229703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 491 - 531
Target Start/End: Complemental strand, 42115694 - 42115654
Alignment:
Q  491 tatttaaaacttttgaaacttaaaggactaacttgaaaatt 531  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  42115694 tatttaaaacttttgagacttaaaggactaacttgagaatt 42115654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 309 - 357
Target Start/End: Original strand, 52568070 - 52568118
Alignment:
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaac 357  Q
    |||||||||||| |||||||||||| ||| | |||||||||||||||||    
T  52568070 ttttgacaccctagagcttttaaaacgcatcattttgatccaagtcaac 52568118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 417 - 488
Target Start/End: Complemental strand, 9320086 - 9320015
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaa 488  Q
    |||||||||  ||||| ||||||| || |||| |||||  | ||||||||||||| ||||||||||||||||    
T  9320086 aaactaaaagaacttaattgaaactttcgaaacttaaaaaactaacttgagaattttgtcaaactaaaagaa 9320015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 520 - 567
Target Start/End: Complemental strand, 26329809 - 26329762
Alignment:
Q  520 aacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    ||||||| |||| ||||||| ||||||||||||| |||||||||||||    
T  26329809 aacttgagaattctgtcaaattaaaaggaccaaaaatggtatttggcc 26329762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 497 - 548
Target Start/End: Complemental strand, 35046544 - 35046493
Alignment:
Q  497 aaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaagga 548  Q
    ||||||||||||||||||||||||| ||   |||| ||||||||||||||||    
T  35046544 aaacttttgaaacttaaaggactaatttaggaattctgtcaaactaaaagga 35046493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 422 - 562
Target Start/End: Complemental strand, 36890542 - 36890399
Alignment:
Q  422 aaaatgacttatttgaaacctttgaaatttaaagga-ttaacttgagaattatgtcaaa-ctaaaagaatctatttaaaacttttgaaactta-aaggac 518  Q
    ||||||||||||||||||| ||||||| ||||| || | |||||  ||||| ||||||| | ||||  ||||| || |||||||  ||||||| ||||||    
T  36890542 aaaatgacttatttgaaacttttgaaacttaaaagactaaacttcggaattctgtcaaaccaaaaatgatctaattgaaactttcaaaacttagaaggac 36890443  T
Q  519 taacttgaaaattttgtcaaactaaaaggaccaaacatggtatt 562  Q
    | |||||  ||||  |||| |||||||||||||||  |||||||    
T  36890442 tgacttgggaattcagtcatactaaaaggaccaaaagtggtatt 36890399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 502 - 545
Target Start/End: Complemental strand, 36890583 - 36890540
Alignment:
Q  502 tttgaaacttaaaggactaacttgaaaattttgtcaaactaaaa 545  Q
    |||||||||||||||||||||||| ||||| ||||||| |||||    
T  36890583 tttgaaacttaaaggactaacttggaaattatgtcaaattaaaa 36890540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 497 - 548
Target Start/End: Original strand, 36890655 - 36890706
Alignment:
Q  497 aaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaagga 548  Q
    |||||||| ||||||||| || |||||| |||||| ||||||||||||||||    
T  36890655 aaacttttaaaacttaaatgattaacttaaaaattctgtcaaactaaaagga 36890706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 405 - 486
Target Start/End: Complemental strand, 2508348 - 2508269
Alignment:
Q  405 gaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaag 486  Q
    |||||| ||||| ||||| ||||||  ||||||||| ||||||  |||||||| |||||||  |||| ||||||||||||||    
T  2508348 gaaatggtttatcaactagaatgac--atttgaaacttttgaagcttaaaggactaacttggaaattctgtcaaactaaaag 2508269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 348 - 402
Target Start/End: Complemental strand, 19631972 - 19631918
Alignment:
Q  348 ccaagtcaacaatttaacggctacattaatatcaattaattattaactcacaaca 402  Q
    |||||||||||| ||||||||||||| |  |||||||||||||||| | ||||||    
T  19631972 ccaagtcaacaacttaacggctacatcagcatcaattaattattaaatgacaaca 19631918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 433 - 511
Target Start/End: Complemental strand, 26329883 - 26329805
Alignment:
Q  433 tttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaactt 511  Q
    |||||||| ||||||| |||||||  |||||||  |||| |||||||||||||| | ||| || ||||||| |||||||    
T  26329883 tttgaaacttttgaaacttaaagggctaacttggaaattctgtcaaactaaaaggacctaattgaaactttcgaaactt 26329805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 412 - 486
Target Start/End: Original strand, 36890630 - 36890704
Alignment:
Q  412 tttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaag 486  Q
    ||||| |||||||||||| ||||  |||| ||| ||| ||||| ||||||||| | |||| ||||||||||||||    
T  36890630 tttatcaactaaaatgacctattataaacttttaaaacttaaatgattaacttaaaaattctgtcaaactaaaag 36890704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 442 - 488
Target Start/End: Original strand, 52866367 - 52866413
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaa 488  Q
    ||||||| |||||||| ||||||| ||||| ||||||||||||||||    
T  52866367 tttgaaacttaaaggactaacttgggaattctgtcaaactaaaagaa 52866413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 417 - 486
Target Start/End: Complemental strand, 2788866 - 2788797
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaag 486  Q
    ||||||||| ||| || ||||||| || |||| |||||||| |||||||||||||   ||||||||||||    
T  2788866 aaactaaaaggacctaattgaaactttcgaaacttaaaggactaacttgagaatttcatcaaactaaaag 2788797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 501 - 546
Target Start/End: Complemental strand, 2909287 - 2909242
Alignment:
Q  501 ttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaag 546  Q
    |||||||| ||||||||||||||||| |||| ||| ||||||||||    
T  2909287 ttttgaaatttaaaggactaacttgagaattctgtaaaactaaaag 2909242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 285 - 386
Target Start/End: Complemental strand, 30542897 - 30542796
Alignment:
Q  285 tatttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaatt 384  Q
    |||||||| ||||| || ||| | |||||||||||| ||| ||||||||| || | |||| ||| |||| ||||| ||||||| ||||| | ||| ||||    
T  30542897 tatttgtgatcattaaacgtagcgttttgacaccctagagtttttaaaatacaacattttaatctaagttaacaacttaacggttacatcagtattaatt 30542798  T
Q  385 aa 386  Q
    ||    
T  30542797 aa 30542796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 510 - 567
Target Start/End: Original strand, 41735958 - 41736015
Alignment:
Q  510 ttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    |||||| |||||||||  |||| |||||||||||||||| ||||  ||||||||||||    
T  41735958 ttaaagtactaacttgggaattctgtcaaactaaaaggatcaaaagtggtatttggcc 41736015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 473
Target Start/End: Complemental strand, 42115705 - 42115652
Alignment:
Q  420 ctaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattat 473  Q
    |||||| ||||||||| |||| ||||| | |||||||| |||||||||||||||    
T  42115705 ctaaaaggacttatttaaaacttttgagacttaaaggactaacttgagaattat 42115652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 412 - 485
Target Start/End: Original strand, 42116051 - 42116124
Alignment:
Q  412 tttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaa 485  Q
    ||||| || ||||| ||| ||||| |||| ||||||| |||||||| |||||| | |||| |||||||||||||    
T  42116051 tttatcaattaaaaagacctatttaaaacttttgaaacttaaaggactaacttaaaaattttgtcaaactaaaa 42116124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 417 - 486
Target Start/End: Original strand, 52183472 - 52183541
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaag 486  Q
    ||||||||| | | || ||||||| || |||| |||||||| ||||||||||||| ||| ||||||||||    
T  52183472 aaactaaaagggcctaattgaaactttcgaaacttaaaggactaacttgagaattttgtaaaactaaaag 52183541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 110; Significance: 5e-55; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 194 - 403
Target Start/End: Original strand, 28816 - 29024
Alignment:
Q  194 aaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactgatatttgtgt 293  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||  |||  |||||||||| ||||||||||||||| |||| |||| ||||||     
T  28816 aaatggtcatttatagtactagaaagacagctatttacaacaacaaatgcattttgagcactattaaacgacatttatagtgctaaaatgatgtttgtga 28915  T
Q  294 tcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaattattaa 393  Q
    ||||| || ||||| ||||||||||| | ||||||||||| ||| ||||||||||||| ||||||| ||||| ||||||| || ||||||||||||||||    
T  28916 tcattaaacgtaacgttttgacaccc-gaagcttttaaaaggcatcgttttgatccaaatcaacaacttaaccgctacatcaacatcaattaattattaa 29014  T
Q  394 ctcacaacag 403  Q
    || |||||||    
T  29015 ctgacaacag 29024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 399 - 552
Target Start/End: Complemental strand, 28698 - 28545
Alignment:
Q  399 aacagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaa 498  Q
    ||||| |||||  ||||| |||||||||||| |||||||||| |||||| ||||||||| ||||||||||||| ||||||| |||||| | ||| || ||    
T  28698 aacagtgaaatagtttatcaactaaaatgacctatttgaaacttttgaattttaaaggactaacttgagaattctgtcaaattaaaaggacctaattgaa 28599  T
Q  499 acttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaa 552  Q
    |||||  |||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  28598 actttcaaaacttaaaggactaacttggaaattctgtcaaattaaaaggaccaa 28545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 106; Significance: 1e-52; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 184 - 519
Target Start/End: Complemental strand, 8903140 - 8902795
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactg 283  Q
    ||||||||||||||| ||||||||||| |||||||  ||||||||| |||||||||||||||||||| |||||||  ||||||| |||| || || | ||    
T  8903140 taatggtcataaatgatcatttatagtcctagaaaagcaactatttgcaacaacaaatgtctttctaacactattcaacgacatatataatgctagaatg 8903041  T
Q  284 at-atttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaa 382  Q
    || | |||||   ||| || ||||| |||||||||  |||||||||||||| ||| ||||||||||||||||||||| ||||||||||||| |  ||||     
T  8903040 atcacttgtgacgattaaacgtaacgttttgacacggtggagcttttaaaaggcatcgttttgatccaagtcaacaacttaacggctacatcagcatcag 8902941  T
Q  383 ttaattattaactcac---------aacagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattat 473  Q
    |||||||||||   ||         ||||| ||||| |||||| |||||||| ||||||||| |||| ||||||| |||||||| ||||||| ||||| |    
T  8902940 ttaattattaatcgacaacaggggtaacagtgaaataatttatcaactaaaaggacttatttaaaacttttgaaacttaaaggactaacttgggaatttt 8902841  T
Q  474 gtcaaactaaaagaatctatttaaaacttttgaaacttaaaggact 519  Q
    ||||||||||||  |  || || ||||||| ||||||| |||||||    
T  8902840 gtcaaactaaaatgacttaattgaaactttcgaaacttcaaggact 8902795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 184 - 395
Target Start/End: Original strand, 34254761 - 34254971
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactg 283  Q
    ||||||||| ||| | |||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||  ||| ||    
T  34254761 taatggtcacaaacgatcatttctagtgctagaaagacaactatttacaacaacaaattactttctagcactattaaacgacatttatagtgccaaaatg 34254860  T
Q  284 atatttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaat 383  Q
    |||||||||  |||| || ||||| |||||||| |||| |||||||||||  |||||||||||| ||||||||||| ||||||||||  | |  ||||||    
T  34254861 atatttgtgaccattaaacgtaacgttttgaca-cctgaagcttttaaaagacagcgttttgatacaagtcaacaacttaacggctatttcagcatcaat 34254959  T
Q  384 taattattaact 395  Q
    ||||||||||||    
T  34254960 taattattaact 34254971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 303 - 563
Target Start/End: Complemental strand, 27351313 - 27351041
Alignment:
Q  303 gtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaat---ttaacggctacattaatatcaattaattattaactcaca 399  Q
    ||||| ||||||||||||| | ||||||||| ||| | ||||||| |||||||||||    |||||||||| || || |||| ||||||||||||| |||    
T  27351313 gtaacgttttgacaccctgtatcttttaaaaggcaacattttgattcaagtcaacaaaaacttaacggctatatcaacatcagttaattattaactgaca 27351214  T
Q  400 acagag---------aaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatc 490  Q
     ||| |         ||||  ||||| |||||||||||||||||||| || ||||||| |||||||| |||||||||||||||||||||||||||| |      
T  27351213 gcaggggtaacggtgaaatagtttatcaactaaaatgacttatttgatacttttgaaacttaaaggactaacttgagaattatgtcaaactaaaaggact 27351114  T
Q  491 tatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtattt 563  Q
    || || ||||||| |||||||||||||||||||||  |||| ||||||| ||||| |||||||| ||||||||    
T  27351113 taattgaaactttcgaaacttaaaggactaacttgcgaattctgtcaaagtaaaaagaccaaacgtggtattt 27351041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 265 - 524
Target Start/End: Original strand, 49650844 - 49651096
Alignment:
Q  265 catttatagtgataaactgatatttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaa 364  Q
    |||||||| || |||| |||||||||||  |||| || ||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||    
T  49650844 catttataatgctaaaatgatatttgtgaccattaaacgtagcattttgacaccctggagattttaaaaggcagcgttttgatccaagtcaacaacttaa 49650943  T
Q  365 cggctacattaatatcaattaattatta--actcacaacagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaac 462  Q
    || |||||| || |||||||||||||||  |     ||||| |||||  ||||| |||||||  ||| ||||||||||         |||||||| ||||    
T  49650944 cgactacatcaacatcaattaattattagcaggggtaacagtgaaatagtttatcaactaaagggacctatttgaaac---------ttaaaggactaac 49651034  T
Q  463 ttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaactt 524  Q
    ||||||||| |||||||||||||  |||||||||||||||| ||||||| ||||||||||||    
T  49651035 ttgagaattctgtcaaactaaaatgatctatttaaaactttcgaaacttgaaggactaactt 49651096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 184 - 395
Target Start/End: Complemental strand, 10686575 - 10686363
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactg 283  Q
    ||||||||| ||||| ||||||  |||||||||||||||||| |||||||||||||||||||||||||||| |||| ||| ||||||||||| || | ||    
T  10686575 taatggtcacaaatgatcatttgcagtgctagaaagacaactgtttacaacaacaaatgtctttctagcacgattaaacggcatttatagtgctagaatg 10686476  T
Q  284 at-atttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaa 382  Q
    || |||||||   ||| || ||||  |||||||||||  |||||||||||| |||   ||||||| ||||||||||| ||||||||||||| |  ||||     
T  10686475 atcatttgtgacgattaaacgtaatgttttgacaccccagagcttttaaaaggcaatattttgatacaagtcaacaacttaacggctacatcagcatcag 10686376  T
Q  383 ttaattattaact 395  Q
    |||||||||||||    
T  10686375 ttaattattaact 10686363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 200 - 373
Target Start/End: Original strand, 29418806 - 29418980
Alignment:
Q  200 tcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactga-tatttgtgttcatt 298  Q
    |||||||||||||||||||||||| ||||||||||| ||||||  |||||| |||||||| ||||||||||||||| || | ||| |||||||| | |||    
T  29418806 tcatttatagtgctagaaagacaattatttacaacagcaaatgcatttctatcactattaaacgacatttatagtgttataatgattatttgtgatgatt 29418905  T
Q  299 gaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacat 373  Q
     || ||||| | |||||||||||||| ||||||||  |||  ||||||||||||||||||| |||||||||||||    
T  29418906 aaacgtaacgtgttgacaccctggagtttttaaaagacagtattttgatccaagtcaacaacttaacggctacat 29418980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 431 - 567
Target Start/End: Complemental strand, 34254621 - 34254485
Alignment:
Q  431 tatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaat 530  Q
    |||||||||| ||||||| |||||||| | ||||  ||||| |||||||||||||| |||||||||||||||||||| |||||||||| ||||||| |||    
T  34254621 tatttgaaacttttgaaacttaaaggactgacttaggaattctgtcaaactaaaaggatctatttaaaacttttgaaccttaaaggaccaacttgagaat 34254522  T
Q  531 tttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    | |||||||||||||||| ||||||| ||||||||||    
T  34254521 tctgtcaaactaaaaggaacaaacattgtatttggcc 34254485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 417 - 567
Target Start/End: Original strand, 44964062 - 44964211
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaagg 516  Q
    ||||||||| ||| |||||||||| ||| ||| |||||||| ||||||||||||| |||||||||||||  ||||| || ||||||| |||||||||| |    
T  44964062 aaactaaaaggacctatttgaaacttttaaaacttaaaggaataacttgagaattctgtcaaactaaaatgatctaattgaaactttcgaaacttaaa-g 44964160  T
Q  517 actaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    |||||||||| ||||||||| ||||||||||| |||| |||||||||||||    
T  44964161 actaacttgagaattttgtctaactaaaaggatcaaaaatggtatttggcc 44964211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 348 - 566
Target Start/End: Original strand, 48352652 - 48352879
Alignment:
Q  348 ccaagtcaacaatttaacggctacattaatatcaattaattattaactcaca---------acagagaaatgatttataaactaaaatgacttatttgaa 438  Q
    ||||||||| || ||||||||||||||  ||||| ||||||||||||| |||         |||| |||||  ||||| |||||||||||| ||||| ||    
T  48352652 ccaagtcaataacttaacggctacattggtatcagttaattattaactgacagcaagggtaacagtgaaatagtttatcaactaaaatgacctatttaaa 48352751  T
Q  439 acctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaa 538  Q
    || ||||||| |||||||| ||||||| ||||||||||||||||||   | ||| || || |||| |||||||||| |||||||| |  |||| ||||||    
T  48352752 acttttgaaacttaaaggactaacttgggaattatgtcaaactaaatagacctaattgaatctttcgaaacttaaaagactaactcgggaattctgtcaa 48352851  T
Q  539 actaaaaggaccaaacatggtatttggc 566  Q
    |||||||||||||||  |||||||||||    
T  48352852 actaaaaggaccaaaagtggtatttggc 48352879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 412 - 553
Target Start/End: Original strand, 10686697 - 10686838
Alignment:
Q  412 tttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaactt 511  Q
    ||||| |||||||||||| |||||||||| ||| ||| ||||| || ||||||||||||| |||  || |||||| | |||  | ||||||| |||||||    
T  10686697 tttatcaactaaaatgacctatttgaaacttttaaaacttaaatgactaacttgagaattctgttgaagtaaaaggacctaacttaaactttcgaaactt 10686796  T
Q  512 aaaggactaacttgaaaattttgtcaaactaaaaggaccaaa 553  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  10686797 aaaggactaacttgaaaattctgtcaaactaaaaggaccaaa 10686838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 433 - 545
Target Start/End: Original strand, 44964018 - 44964130
Alignment:
Q  433 tttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattt 532  Q
    |||||||| ||| |||||||||||| ||||||||||||| |||||||||||||| | |||||| |||||||| |||||||||||| |||||||| ||||     
T  44964018 tttgaaacttttaaaatttaaaggactaacttgagaattctgtcaaactaaaaggacctatttgaaacttttaaaacttaaaggaataacttgagaattc 44964117  T
Q  533 tgtcaaactaaaa 545  Q
    |||||||||||||    
T  44964118 tgtcaaactaaaa 44964130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 417 - 564
Target Start/End: Original strand, 17898836 - 17898983
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaagg 516  Q
    |||||||||||||||||||||||| ||||||| |||||||| ||| ||| ||||| | |||||||||||| | ||| || ||| |||| ||||||||||     
T  17898836 aaactaaaatgacttatttgaaacttttgaaacttaaaggactaatttgtgaattctatcaaactaaaaggacctaattgaaatttttaaaacttaaaga 17898935  T
Q  517 actaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttg 564  Q
    ||||| |||| |||  |||||||||||||||||||||  |||||||||    
T  17898936 actaatttgagaatcatgtcaaactaaaaggaccaaaagtggtatttg 17898983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 195 - 387
Target Start/End: Complemental strand, 4772460 - 4772268
Alignment:
Q  195 aatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactgat-atttgtgt 293  Q
    |||| |||||||||||| ||||||||||||||||  ||| ||||||||||||||||||||||||| || ||||||| | || || | |||| |||||||     
T  4772460 aatgatcatttatagtggtagaaagacaactattcgcaataacaaatgtctttctagcactattaaacaacatttacaatgctagaatgatcatttgtga 4772361  T
Q  294 tcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaat 387  Q
     |||| || ||||| |||||||| || | ||||||||||| |||| |||| ||||||||||||||| |||| || ||||| |  ||||||||||    
T  4772360 ccattaaacgtaacgttttgaca-ccagaagcttttaaaaggcagagtttcgatccaagtcaacaacttaatggttacatcatcatcaattaat 4772268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 450 - 564
Target Start/End: Complemental strand, 11897945 - 11897831
Alignment:
Q  450 ttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggac 549  Q
    |||||||||||||||| ||||| |||||||||||||| | ||| || ||||||| |||||||||| ||||||||||| |||| ||||||||||||| |||    
T  11897945 ttaaaggattaacttgggaattctgtcaaactaaaaggacctaattgaaactttcgaaacttaaatgactaacttgagaattctgtcaaactaaaatgac 11897846  T
Q  550 caaacatggtatttg 564  Q
    ||||  |||||||||    
T  11897845 caaaagtggtatttg 11897831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 452 - 567
Target Start/End: Original strand, 39302711 - 39302826
Alignment:
Q  452 aaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggacca 551  Q
    |||||| |||||||| |||| ||| |||||||||  || || || |||||||| ||| ||||||||||||||||| |||| |||||||||||||||||||    
T  39302711 aaaggagtaacttgaaaattttgttaaactaaaacgatatagttgaaacttttaaaatttaaaggactaacttgagaattctgtcaaactaaaaggacca 39302810  T
Q  552 aacatggtatttggcc 567  Q
    ||| ||||||||||||    
T  39302811 aacgtggtatttggcc 39302826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 411 - 553
Target Start/End: Original strand, 29419027 - 29419173
Alignment:
Q  411 atttataaactaaaatgacttat----ttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttga 506  Q
    |||||| ||||||||||||||||    ||||||| ||||||| ||||| || ||| ||  ||||| |||||||||||||| | ||| || ||||||| ||    
T  29419027 atttatcaactaaaatgacttatttatttgaaacttttgaaacttaaaagactaattttggaattctgtcaaactaaaaggacctaattgaaactttcga 29419126  T
Q  507 aacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaa 553  Q
    ||||| || |||||||||| ||||| |||||||||||||||||||||    
T  29419127 aacttgaaagactaacttggaaattatgtcaaactaaaaggaccaaa 29419173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 417 - 545
Target Start/End: Original strand, 1765916 - 1766044
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaagg 516  Q
    |||||||||||||||||||||||| ||||||  |||||||| |||| ||||| || |||||||||||||  |  || || |||||||||||| ||||| |    
T  1765916 aaactaaaatgacttatttgaaacttttgaagcttaaaggactaacatgagatttctgtcaaactaaaatgacataatttaaacttttgaaatttaaaag 1766015  T
Q  517 actaacttgaaaattttgtcaaactaaaa 545  Q
    |||||||||| |||| ||||||| |||||    
T  1766016 actaacttgagaattctgtcaaattaaaa 1766044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 184 - 284
Target Start/End: Original strand, 37663309 - 37663408
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactg 283  Q
    ||||||||| ||||| ||||||||||||||||||||| ||||||||||||||| |||||  ||||||||||||||| || |||||||||||| || ||||    
T  37663309 taatggtcacaaatgatcatttatagtgctagaaagataactatttacaacaa-aaatgcatttctagcactattaaacaacatttatagtgctagactg 37663407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 442 - 553
Target Start/End: Complemental strand, 10685959 - 10685848
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaact 541  Q
    ||||||| |||||||| |||||||  |||| |||||||||||||  |  || || |||| || ||||||||||||||||||||||||||| |||||||||    
T  10685959 tttgaaacttaaaggactaacttggaaattctgtcaaactaaaaagacgtaattgaaacgttcgaaacttaaaggactaacttgaaaattctgtcaaact 10685860  T
Q  542 aaaaggaccaaa 553  Q
    ||||||||||||    
T  10685859 aaaaggaccaaa 10685848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 435 - 550
Target Start/End: Original strand, 17898794 - 17898909
Alignment:
Q  435 tgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttg 534  Q
    |||||| |||||||||||||||| ||| |||| |||| |||||||||||||  |  ||||| ||||||||||||||||||||||||| |||  |||| |     
T  17898794 tgaaacttttgaaatttaaaggactaatttgataattctgtcaaactaaaatgacttatttgaaacttttgaaacttaaaggactaatttgtgaattcta 17898893  T
Q  535 tcaaactaaaaggacc 550  Q
    ||||||||||||||||    
T  17898894 tcaaactaaaaggacc 17898909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 184 - 257
Target Start/End: Complemental strand, 27351405 - 27351332
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactat 257  Q
    ||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||    
T  27351405 taatggtcacaaatgatcatttatagtgctagaaagacagctatttacaacaacaaatgcctttttagcactat 27351332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 446 - 545
Target Start/End: Complemental strand, 35701548 - 35701450
Alignment:
Q  446 aaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaa 545  Q
    ||||||||| || ||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||  | |||||| |||||| ||| |||||||||    
T  35701548 aaatttaaaagactaacttgagaattatgtcaaattaaaagaatttatttaaaacttttgaaatttaaa-aattaacttaaaaattctgttaaactaaaa 35701450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 48352557 - 48352466
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtg 275  Q
    ||||||||| ||||| ||||||||||||||||||| ||| || ||||||||| |||||| |||| ||||||||||| || ||||||||||||    
T  48352557 taatggtcacaaatgatcatttatagtgctagaaatacacctttttacaacaccaaatgcctttatagcactattaaacaacatttatagtg 48352466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 399 - 485
Target Start/End: Original strand, 8903249 - 8903335
Alignment:
Q  399 aacagagaaatgatttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaa 485  Q
    ||||| ||||| |||||  |||||||||||  |||||||||| || |||| ||||||||||||||||||||||||||||||||||||    
T  8903249 aacagtgaaataatttagcaactaaaatgatatatttgaaactttcgaaacttaaaggattaacttgagaattatgtcaaactaaaa 8903335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 452 - 562
Target Start/End: Complemental strand, 49650674 - 49650564
Alignment:
Q  452 aaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggacca 551  Q
    |||||| ||||||||||||| |||||||||||||| | ||| || ||| |||  ||| ||||||||||||||||| |||| ||||||||||||||||  |    
T  49650674 aaaggactaacttgagaattctgtcaaactaaaaggacctaattgaaattttcaaaatttaaaggactaacttgagaattatgtcaaactaaaaggataa 49650575  T
Q  552 aacatggtatt 562  Q
    || ||||||||    
T  49650574 aaaatggtatt 49650564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 215 - 403
Target Start/End: Complemental strand, 4030590 - 4030401
Alignment:
Q  215 gaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactgat-atttgtgttcattgaatgtaacattttg 313  Q
    |||||||||||||||||||||| |||||  ||||||||||||||| ||  ||||||||||| || | |||| ||| |||   ||| || ||||| |||      
T  4030590 gaaagacaactatttacaacaaaaaatgcatttctagcactattaaacagcatttatagtggtagaatgatcattggtgacgattaaacgtaacgtttct 4030491  T
Q  314 acaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaattattaactcacaacag 403  Q
    ||| | |||| ||||||||| |||| ||||||||| |||||||||| |||| ||||| || |  |||| || |||||||||| |||||||    
T  4030490 acatcatggaacttttaaaaggcagtgttttgatcaaagtcaacaacttaatggctagatcagcatcagttgattattaactaacaacag 4030401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 478 - 545
Target Start/End: Complemental strand, 8902896 - 8902829
Alignment:
Q  478 aactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaa 545  Q
    ||||||||| |  |||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  8902896 aactaaaaggacttatttaaaacttttgaaacttaaaggactaacttgggaattttgtcaaactaaaa 8902829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 478 - 543
Target Start/End: Complemental strand, 1765828 - 1765763
Alignment:
Q  478 aactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaa 543  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||  ||||| |||||||||||    
T  1765828 aactaaaaggatctatttaaaacttttgaaacttaaaggactaatttagaaattatgtcaaactaa 1765763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 442 - 545
Target Start/End: Original strand, 1765881 - 1765984
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaact 541  Q
    ||||||| |||||||| |||||||  |||| |||||||||||||  |  ||||| ||||||||||| |||||||||||||| ||| | || |||||||||    
T  1765881 tttgaaacttaaaggagtaacttggaaattctgtcaaactaaaatgacttatttgaaacttttgaagcttaaaggactaacatgagatttctgtcaaact 1765980  T
Q  542 aaaa 545  Q
    ||||    
T  1765981 aaaa 1765984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 491 - 564
Target Start/End: Complemental strand, 2965553 - 2965480
Alignment:
Q  491 tatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttg 564  Q
    ||||||||||||||||||||||||||  |||||||||||||  |||||||||||| ||| |||  |||||||||    
T  2965553 tatttaaaacttttgaaacttaaaggtataacttgaaaattcggtcaaactaaaaagacaaaaattggtatttg 2965480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 502 - 563
Target Start/End: Complemental strand, 4772222 - 4772161
Alignment:
Q  502 tttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtattt 563  Q
    ||||||||||||||||||| ||||  ||||||||||||||||||||||| ||| ||||||||    
T  4772222 tttgaaacttaaaggactaccttgtgaattttgtcaaactaaaaggacctaacgtggtattt 4772161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 478 - 567
Target Start/End: Original strand, 8903268 - 8903357
Alignment:
Q  478 aactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    ||||||||  || ||||| ||||||| ||||||||||||| |||||||| |||| ||||||||||||| |||||||  | ||||||||||    
T  8903268 aactaaaatgatatatttgaaactttcgaaacttaaaggattaacttgagaattatgtcaaactaaaaagaccaaaagtagtatttggcc 8903357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 502 - 550
Target Start/End: Original strand, 4772650 - 4772698
Alignment:
Q  502 tttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggacc 550  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  4772650 tttgaaacttaaaggactaacttggaaattctgtcaaactaaaaggacc 4772698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 307 - 395
Target Start/End: Original strand, 27351413 - 27351501
Alignment:
Q  307 cattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaattattaact 395  Q
    ||||| |||||||| ||||||||||||  || | |||||||| |||||||||| ||||||||||||| |  |||| |||||||||||||    
T  27351413 catttcgacaccctagagcttttaaaaaacaacattttgatcaaagtcaacaacttaacggctacatcagcatcacttaattattaact 27351501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 442 - 553
Target Start/End: Original strand, 27351548 - 27351659
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaact 541  Q
    ||||||| |||||||| ||| ||||||||| | ||||| |||||  |  || |||||||||| ||||||||||| |  ||||||| |||| ||||||| |    
T  27351548 tttgaaacttaaaggactaatttgagaattctatcaaaataaaacgacataattaaaactttcgaaacttaaagtatcaacttgagaattatgtcaaatt 27351647  T
Q  542 aaaaggaccaaa 553  Q
    ||||||||||||    
T  27351648 aaaaggaccaaa 27351659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 416 - 486
Target Start/End: Original strand, 39302735 - 39302805
Alignment:
Q  416 taaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaag 486  Q
    |||||||||| ||  || ||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||    
T  39302735 taaactaaaacgatatagttgaaacttttaaaatttaaaggactaacttgagaattctgtcaaactaaaag 39302805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 479 - 548
Target Start/End: Complemental strand, 34254633 - 34254564
Alignment:
Q  479 actaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaagga 548  Q
    |||||||| || ||||| ||||||||||||||||||||||| ||||   |||| ||||||||||||||||    
T  34254633 actaaaagcatatatttgaaacttttgaaacttaaaggactgacttaggaattctgtcaaactaaaagga 34254564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 497 - 550
Target Start/End: Original strand, 44964022 - 44964075
Alignment:
Q  497 aaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggacc 550  Q
    |||||||| ||| ||||||||||||||||| |||| ||||||||||||||||||    
T  44964022 aaacttttaaaatttaaaggactaacttgagaattctgtcaaactaaaaggacc 44964075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 417 - 486
Target Start/End: Complemental strand, 49650649 - 49650580
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaag 486  Q
    ||||||||| ||| || ||||||  ||  |||||||||||| ||||||||||||||||||||||||||||    
T  49650649 aaactaaaaggacctaattgaaattttcaaaatttaaaggactaacttgagaattatgtcaaactaaaag 49650580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 467 - 546
Target Start/End: Complemental strand, 4030390 - 4030310
Alignment:
Q  467 gaattatgtcaaactaaaa-gaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaag 546  Q
    ||||| ||||||||||||| | | ||| || ||||||| ||||||||||||| |||||| | |||||||||||||||||||    
T  4030390 gaattctgtcaaactaaaaaggacctaattgaaactttcgaaacttaaaggattaacttaagaattttgtcaaactaaaag 4030310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 502 - 545
Target Start/End: Original strand, 49651014 - 49651057
Alignment:
Q  502 tttgaaacttaaaggactaacttgaaaattttgtcaaactaaaa 545  Q
    ||||||||||||||||||||||||| |||| |||||||||||||    
T  49651014 tttgaaacttaaaggactaacttgagaattctgtcaaactaaaa 49651057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 491 - 549
Target Start/End: Complemental strand, 44963961 - 44963903
Alignment:
Q  491 tatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggac 549  Q
    ||||||||||||||||||||||||||||||| |||  |||  | |||||||||||||||    
T  44963961 tatttaaaacttttgaaacttaaaggactaatttgggaatcctatcaaactaaaaggac 44963903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 412 - 485
Target Start/End: Complemental strand, 2965572 - 2965499
Alignment:
Q  412 tttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaa 485  Q
    ||||| |||||||||||| ||||| |||| ||||||| |||||||  |||||||| ||||  ||||||||||||    
T  2965572 tttatcaactaaaatgacatatttaaaacttttgaaacttaaaggtataacttgaaaattcggtcaaactaaaa 2965499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 417 - 486
Target Start/End: Complemental strand, 10685924 - 10685855
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaag 486  Q
    ||||||||| ||| || ||||||| || |||| |||||||| |||||||| |||| ||||||||||||||    
T  10685924 aaactaaaaagacgtaattgaaacgttcgaaacttaaaggactaacttgaaaattctgtcaaactaaaag 10685855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 430 - 535
Target Start/End: Complemental strand, 35701504 - 35701400
Alignment:
Q  430 ttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaa 529  Q
    |||||| |||| |||||||||||||  |||||||| | |||| ||| |||||||||  ||||| ||||||||||  ||||||||| || ||| || ||||    
T  35701504 ttatttaaaacttttgaaatttaaa-aattaacttaaaaattctgttaaactaaaaagatctaattaaaactttcaaaacttaaaagattaaattaaaaa 35701406  T
Q  530 ttttgt 535  Q
    ||||||    
T  35701405 ttttgt 35701400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 478 - 567
Target Start/End: Complemental strand, 39302406 - 39302317
Alignment:
Q  478 aactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    ||||||||||| ||| |  ||||||||||||||||||| | ||| |||  |||| |||||||||||||| | ||||  ||||||||||||    
T  39302406 aactaaaagaacctaatcgaaacttttgaaacttaaagaattaatttgtgaattctgtcaaactaaaagaaacaaaagtggtatttggcc 39302317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 288 - 373
Target Start/End: Complemental strand, 49650839 - 49650754
Alignment:
Q  288 ttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacat 373  Q
    ||||| ||||| || ||| | ||||||||||||| | |||||||||  || | ||||||||||| ||||||| |||||||||||||    
T  49650839 ttgtgatcattaaacgtatcgttttgacaccctgaaacttttaaaagacaacattttgatccaaatcaacaacttaacggctacat 49650754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 434 - 486
Target Start/End: Complemental strand, 4030362 - 4030310
Alignment:
Q  434 ttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaag 486  Q
    ||||||| || |||| ||||||||||||||| |||||| ||||||||||||||    
T  4030362 ttgaaactttcgaaacttaaaggattaacttaagaattttgtcaaactaaaag 4030310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 309 - 369
Target Start/End: Original strand, 8903150 - 8903210
Alignment:
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggct 369  Q
    |||| ||||||| || ||||||||| ||| | ||||||||||||| |||||||||||||||    
T  8903150 tttttacaccctcgaacttttaaaaggcaccattttgatccaagttaacaatttaacggct 8903210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 417 - 485
Target Start/End: Complemental strand, 11897918 - 11897850
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaa 485  Q
    ||||||||| ||| || ||||||| || |||| ||||| || ||||||||||||| |||||||||||||    
T  11897918 aaactaaaaggacctaattgaaactttcgaaacttaaatgactaacttgagaattctgtcaaactaaaa 11897850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 309 - 373
Target Start/End: Complemental strand, 39302518 - 39302454
Alignment:
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacat 373  Q
    ||||||||||||| ||||||||||| ||| | |||||||||| || |||||||| |||| |||||    
T  39302518 ttttgacaccctgaagcttttaaaaggcaacattttgatccacgttaacaatttcacggttacat 39302454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 309 - 359
Target Start/End: Complemental strand, 34254751 - 34254701
Alignment:
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaa 359  Q
    |||| ||||| || ||||||||||| ||||| |||||||||||||||||||    
T  34254751 ttttaacaccatgaagcttttaaaaggcagcattttgatccaagtcaacaa 34254701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 309 - 386
Target Start/End: Original strand, 4772517 - 4772594
Alignment:
Q  309 ttttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaattaa 386  Q
    ||||||||||||  ||||||||||| ||| | |||||||| || ||||||| || || ||||||| ||||||| ||||    
T  4772517 ttttgacaccctcaagcttttaaaaggcaacattttgatctaaatcaacaacttcacagctacatcaatatcagttaa 4772594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 27351257 - 27351294
Alignment:
Q  148 ttgttgacttgaattaaaatgttgtcttttaaaagata 185  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  27351257 ttgttgacttgaatcaaaatgttgccttttaaaagata 27351294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 417 - 486
Target Start/End: Complemental strand, 34254575 - 34254506
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaag 486  Q
    ||||||||| ||  ||||| |||| ||||||  ||||||||  |||||||||||| ||||||||||||||    
T  34254575 aaactaaaaggatctatttaaaacttttgaaccttaaaggaccaacttgagaattctgtcaaactaaaag 34254506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 320 - 373
Target Start/End: Complemental strand, 48352442 - 48352389
Alignment:
Q  320 tggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacat 373  Q
    ||||||||||||||||||    ||| |||||||||||||| |||||||||||||    
T  48352442 tggagcttttaaaatgcattagtttaatccaagtcaacaacttaacggctacat 48352389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 97; Significance: 3e-47; HSPs: 4)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 184 - 395
Target Start/End: Original strand, 9648 - 9859
Alignment:
Q  184 taatggtcataaatggtcatttatagtgctagaaagacaactatttacaacaacaaatgtctttctagcactattagacgacatttatagtgataaactg 283  Q
    ||||||||| ||||| |||||||||||| | |||||||||||||||||||||||||||||||||  | |||||||| |||||||||||| || || | ||    
T  9648 taatggtcacaaatgatcatttatagtgtt-gaaagacaactatttacaacaacaaatgtcttttcaacactattaaacgacatttataatgctagaatg 9746  T
Q  284 at-atttgtgttcattgaatgtaacattttgacaccctggagcttttaaaatgcagcgttttgatccaagtcaacaatttaacggctacattaatatcaa 382  Q
    || |||||||   ||| |||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||| |||||| |   || |    
T  9747 atcatttgtgacgattaaatgtaacgttttgacaccctggagcttttaaaagacagcgttttgatccaagtcaacaatgtaacgactacatcagcctcga 9846  T
Q  383 ttaattattaact 395  Q
    |||||||||||||    
T  9847 ttaattattaact 9859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 452 - 565
Target Start/End: Original strand, 9896 - 10009
Alignment:
Q  452 aaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggacca 551  Q
    |||||| ||||||| |||||||||||||||||||| | ||| || ||||||| ||||||||||| |||||||||| |||| ||||||||||||||||| |    
T  9896 aaaggactaacttgggaattatgtcaaactaaaaggaactaattgaaactttcgaaacttaaagaactaacttgagaattctgtcaaactaaaaggacga 9995  T
Q  552 aacatggtatttgg 565  Q
    ||| || |||||||    
T  9996 aacgtgatatttgg 10009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 442 - 564
Target Start/End: Complemental strand, 9505 - 9383
Alignment:
Q  442 tttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaact 541  Q
    ||||||| |||||| | ||||||||||||| | | |||||||||| | ||| || ||||||  |||||||||| ||||||||| | |||| |||||||||    
T  9505 tttgaaacttaaagaactaacttgagaattctattaaactaaaaggacctaattgaaacttccgaaacttaaatgactaacttaagaattctgtcaaact 9406  T
Q  542 aaaaggaccaaacatggtatttg 564  Q
    |||||||| ||| ||| ||||||    
T  9405 aaaaggacgaaaaatgatatttg 9383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 417 - 486
Target Start/End: Original strand, 9921 - 9990
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaag 486  Q
    ||||||||| ||  || ||||||| || |||| |||||| | ||||||||||||| ||||||||||||||    
T  9921 aaactaaaaggaactaattgaaactttcgaaacttaaagaactaacttgagaattctgtcaaactaaaag 9990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 68; Significance: 5e-30; HSPs: 3)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 433 - 564
Target Start/End: Complemental strand, 124262 - 124132
Alignment:
Q  433 tttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattt 532  Q
    |||||||| ||||||| |||||| | ||| ||| ||||| |||||||||||||| | || ||| |||||||||||||||||||||||||||||  |||||    
T  124262 tttgaaacttttgaaacttaaag-actaaattgggaattctgtcaaactaaaagcacctgtttgaaacttttgaaacttaaaggactaacttgggaattt 124164  T
Q  533 tgtcaaactaaaaggaccaaacatggtatttg 564  Q
    |||||||||||||||||||||  |||||||||    
T  124163 tgtcaaactaaaaggaccaaaagtggtatttg 124132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 417 - 567
Target Start/End: Original strand, 124345 - 124495
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaagg 516  Q
    ||||||||| ||| || ||||||| || |||| |||||||| |||||||  |||| |||||||||||||| | ||| || ||||||| ||||||||||||    
T  124345 aaactaaaaagacctaattgaaactttcgaaacttaaaggactaacttggaaattctgtcaaactaaaaggacctaattgaaactttcgaaacttaaagg 124444  T
Q  517 actaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    |||||||||  |||| | |||||| ||||||||||||  ||||||||||||    
T  124445 actaacttgggaattatatcaaacaaaaaggaccaaaagtggtatttggcc 124495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 460 - 550
Target Start/End: Original strand, 124328 - 124418
Alignment:
Q  460 aacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggacc 550  Q
    |||||| ||||| |||||||||||||  | ||| || ||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||    
T  124328 aacttgggaattctgtcaaactaaaaagacctaattgaaactttcgaaacttaaaggactaacttggaaattctgtcaaactaaaaggacc 124418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 59; Significance: 1e-24; HSPs: 3)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 431 - 553
Target Start/End: Original strand, 45205 - 45327
Alignment:
Q  431 tatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaat 530  Q
    |||||||||| ||| ||| ||||| || ||| |||| ||||||||||||||||||| | ||| || |||||||| ||||||||| ||||||||||| |||    
T  45205 tatttgaaacttttaaaacttaaatgactaatttgaaaattatgtcaaactaaaaggacctaattgaaacttttaaaacttaaaagactaacttgagaat 45304  T
Q  531 tttgtcaaactaaaaggaccaaa 553  Q
    | |||||||| ||||||||||||    
T  45305 tatgtcaaaccaaaaggaccaaa 45327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 463 - 550
Target Start/End: Original strand, 45177 - 45264
Alignment:
Q  463 ttgagaattatgtcaaactaaaagaatctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggacc 550  Q
    ||||||||| ||||||| |||||| |||||||| |||||||| ||||||||| |||||| ||||||||| ||||||||||||||||||    
T  45177 ttgagaattctgtcaaattaaaaggatctatttgaaacttttaaaacttaaatgactaatttgaaaattatgtcaaactaaaaggacc 45264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 417 - 486
Target Start/End: Original strand, 45251 - 45320
Alignment:
Q  417 aaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaag 486  Q
    ||||||||| ||| || ||||||| ||| ||| ||||| || |||||||||||||||||||||| |||||    
T  45251 aaactaaaaggacctaattgaaacttttaaaacttaaaagactaacttgagaattatgtcaaaccaaaag 45320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374 (Bit Score: 48; Significance: 5e-18; HSPs: 4)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 490 - 553
Target Start/End: Complemental strand, 16236 - 16173
Alignment:
Q  490 ctatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaa 553  Q
    ||||||||||||||| |||||||||||||||| ||| ||||||| |||||||||||||||||||    
T  16236 ctatttaaaactttttaaacttaaaggactaatttggaaattttatcaaactaaaaggaccaaa 16173  T

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Target: scaffold0374; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 498 - 567
Target Start/End: Complemental strand, 16128 - 16059
Alignment:
Q  498 aacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaaggaccaaacatggtatttggcc 567  Q
    ||||||||||||||||| ||||||||| | |||||||| ||||||||| || ||||  ||||||||||||    
T  16128 aacttttgaaacttaaaagactaacttaagaattttgtgaaactaaaatgatcaaaagtggtatttggcc 16059  T

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Target: scaffold0374; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 412 - 487
Target Start/End: Original strand, 16590 - 16665
Alignment:
Q  412 tttataaactaaaatgacttatttgaaacctttgaaatttaaaggattaacttgagaattatgtcaaactaaaaga 487  Q
    ||||| |||||||||||||||||| |||| ||| ||| ||||||||||||||||  |||| | |||||| ||||||    
T  16590 tttatcaactaaaatgacttatttaaaactttttaaacttaaaggattaacttggaaattttatcaaacaaaaaga 16665  T

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Target: scaffold0374; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 491 - 546
Target Start/End: Original strand, 16609 - 16664
Alignment:
Q  491 tatttaaaacttttgaaacttaaaggactaacttgaaaattttgtcaaactaaaag 546  Q
    |||||||||||||| |||||||||||| ||||||| ||||||| |||||| |||||    
T  16609 tatttaaaactttttaaacttaaaggattaacttggaaattttatcaaacaaaaag 16664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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