View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19530_high_104 (Length: 313)
Name: NF19530_high_104
Description: NF19530
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19530_high_104 |
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Alignment Details
Target: chr7 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 17 - 306
Target Start/End: Complemental strand, 7177199 - 7176908
Alignment:
| Q |
17 |
caaacctgaaattttaataacattaattgttgaatgcaaaagcatagcagtatcagcaaaccacctaataagcatggaataaccttaggatgtcaaattc |
116 |
Q |
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| T |
7177199 |
caaacctgaaattttaataacattaattgttgaatgcaaaagcatagcagtatcagcaaaccacctaataagcatggaataaccttaggatgtcaaattc |
7177100 |
T |
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| Q |
117 |
attaaattgtcagttatttgaatgct--aacatcataaacaaatttagtgtcatagcctaattttaaaacaattctgaaagacacagacattagaactag |
214 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7177099 |
attaaattgtcagttatttgaatgcctcaacatcataaacaaatttagtgtcatagcctaattttaaaacaattctgaaagacacagacattagaactag |
7177000 |
T |
|
| Q |
215 |
tccagattacgattattaataatctagtaacaaccaagtagatttgataaacaatttagcagaagacaaaataaaacataacagaataatat |
306 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
7176999 |
tccagattacgattattaataatctagtaacaaccaagtagatttgataaacaatttagcagaagacaaaataaaacataacagaacaatat |
7176908 |
T |
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