View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19530_high_117 (Length: 296)
Name: NF19530_high_117
Description: NF19530
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19530_high_117 |
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Alignment Details
Target: chr5 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 17 - 287
Target Start/End: Complemental strand, 11367786 - 11367516
Alignment:
| Q |
17 |
acaataccgctattacaaatggatataacaaaagaaggagacgtataaagactcccaggtgagaaacctaataccaaaccagaggtccaaaacagaccag |
116 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
11367786 |
acaataccgctattacaaatggatataacaaaagaaggagacgtataaagactcccaggtgagaaaactaataccaaaccagaggtccaaaacagaccag |
11367687 |
T |
|
| Q |
117 |
gtatgccaccaccaaaccacgcattccaattctagaccaccaaaacagaccgcctgcaaacacatcgtaaggcaaagcacataattgggttccaccacca |
216 |
Q |
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|||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11367686 |
gtatgccaccaccaaaccgcgcattccgattctagaccaccaaaacagaccgcctgcaaacacatcgtaaggcaaagcacataattgggttccaccacca |
11367587 |
T |
|
| Q |
217 |
ttcatattataaacaagagctcttcgccattctactaaggaaccacttccaagacaccacttttattttct |
287 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11367586 |
ttcatattataaacaagagctcttcgccattctactaaggaaccacttccaagacaccacttttattttct |
11367516 |
T |
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