View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19530_high_142 (Length: 261)
Name: NF19530_high_142
Description: NF19530
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19530_high_142 |
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Alignment Details
Target: chr5 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 13 - 247
Target Start/End: Original strand, 10329974 - 10330208
Alignment:
| Q |
13 |
aatatcccccgatttcatcatcgaaaattatcattttggaatcatgtggttgatcaaatcagagaagattgttatcttggaattgttgaaacctctggat |
112 |
Q |
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| T |
10329974 |
aatatcccccgacttcatcatcgaaaattatcattttggaatcatgtggttcatcaaatcagagaagattgttatcttcgaattgttgaaacctctggat |
10330073 |
T |
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| Q |
113 |
gggtgacaacctaattcttttgaagtctatttaaacctctatgctagtatacctcctttcctttttcaaaggtttttcaggtattattcttaaaattgag |
212 |
Q |
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| T |
10330074 |
ggatgacaacctaattcttttgaagtctatttaaacatctatgctagtatacctcctttccttttttaaaggtttttcagatatcattcttaaaattgag |
10330173 |
T |
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| Q |
213 |
acttgtaaaattcattgggttcattgagacaaagt |
247 |
Q |
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| T |
10330174 |
acttgtaaaattcgttgggttcattgagacaaagt |
10330208 |
T |
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