View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19530_high_27 (Length: 480)

Name: NF19530_high_27
Description: NF19530
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19530_high_27
NF19530_high_27
[»] chr3 (60 HSPs)
chr3 (196-463)||(24684652-24684920)
chr3 (202-359)||(30443872-30444029)
chr3 (202-374)||(20880455-20880627)
chr3 (202-374)||(39980708-39980880)
chr3 (197-362)||(36630982-36631147)
chr3 (196-372)||(21367640-21367816)
chr3 (271-362)||(31365119-31365210)
chr3 (196-374)||(20257508-20257688)
chr3 (202-362)||(13715503-13715665)
chr3 (204-371)||(37689212-37689377)
chr3 (200-253)||(47132308-47132361)
chr3 (293-373)||(24085258-24085338)
chr3 (290-362)||(46778122-46778194)
chr3 (210-361)||(18405763-18405914)
chr3 (124-163)||(50946404-50946443)
chr3 (295-373)||(584118-584196)
chr3 (335-377)||(1288765-1288807)
chr3 (324-374)||(25447164-25447214)
chr3 (197-350)||(53789406-53789557)
chr3 (206-310)||(49556840-49556945)
chr3 (128-160)||(849555-849587)
chr3 (290-374)||(22203497-22203580)
chr3 (286-362)||(31365240-31365316)
chr3 (196-300)||(36189539-36189642)
chr3 (128-160)||(46886852-46886884)
chr3 (128-171)||(3845716-3845759)
chr3 (331-374)||(16072960-16073003)
chr3 (202-237)||(20170502-20170537)
chr3 (335-374)||(21872214-21872253)
chr3 (196-295)||(35959454-35959553)
chr3 (128-167)||(36507238-36507277)
chr3 (128-171)||(47132250-47132293)
chr3 (202-253)||(49034303-49034354)
chr3 (286-373)||(51929277-51929364)
chr3 (272-362)||(22897-22987)
chr3 (324-358)||(3845498-3845532)
chr3 (128-170)||(5456743-5456785)
chr3 (330-372)||(26911698-26911740)
chr3 (336-374)||(40240740-40240778)
chr3 (196-313)||(901897-902014)
chr3 (128-157)||(944366-944395)
chr3 (290-374)||(21574556-21574643)
chr3 (383-424)||(24653232-24653273)
chr3 (337-374)||(26990144-26990181)
chr3 (335-368)||(27795938-27795971)
chr3 (126-171)||(28240207-28240252)
chr3 (202-231)||(31365362-31365391)
chr3 (331-380)||(32582845-32582894)
chr3 (290-363)||(34610736-34610809)
chr3 (290-351)||(37389250-37389311)
chr3 (302-374)||(47132397-47132467)
chr3 (343-376)||(50211855-50211888)
chr3 (290-362)||(5436139-5436211)
chr3 (339-375)||(22055671-22055706)
chr3 (128-160)||(30956791-30956823)
chr3 (128-160)||(30972603-30972635)
chr3 (331-371)||(33405114-33405154)
chr3 (331-359)||(38902173-38902201)
chr3 (290-362)||(39602142-39602214)
chr3 (293-361)||(46886624-46886692)
[»] chr1 (76 HSPs)
chr1 (57-231)||(27970357-27970531)
chr1 (202-374)||(3233934-3234106)
chr1 (198-362)||(2295074-2295235)
chr1 (196-362)||(473137-473302)
chr1 (196-374)||(14576573-14576750)
chr1 (210-368)||(49938734-49938892)
chr1 (202-314)||(17603363-17603475)
chr1 (196-310)||(24915034-24915148)
chr1 (270-381)||(50644167-50644280)
chr1 (196-362)||(13809971-13810137)
chr1 (260-362)||(29904788-29904890)
chr1 (290-375)||(27146173-27146258)
chr1 (203-347)||(7862058-7862202)
chr1 (290-364)||(36514605-36514679)
chr1 (203-313)||(37631539-37631649)
chr1 (286-372)||(5741669-5741755)
chr1 (286-372)||(5720988-5721074)
chr1 (202-363)||(6556950-6557112)
chr1 (291-371)||(38001663-38001743)
chr1 (202-314)||(41184629-41184741)
chr1 (197-375)||(41505660-41505826)
chr1 (128-172)||(46423153-46423197)
chr1 (335-378)||(6292604-6292647)
chr1 (290-372)||(18327067-18327150)
chr1 (128-171)||(27820484-27820527)
chr1 (305-363)||(33204324-33204382)
chr1 (128-170)||(45855734-45855776)
chr1 (336-374)||(52014000-52014038)
chr1 (291-372)||(2777959-2778040)
chr1 (337-374)||(37431850-37431887)
chr1 (293-374)||(38247397-38247478)
chr1 (210-314)||(40977382-40977487)
chr1 (209-298)||(42174841-42174930)
chr1 (290-374)||(3887551-3887635)
chr1 (290-354)||(14332048-14332112)
chr1 (202-242)||(27976574-27976614)
chr1 (128-160)||(47498998-47499030)
chr1 (204-308)||(51929524-51929628)
chr1 (335-374)||(4276569-4276608)
chr1 (128-171)||(17727249-17727292)
chr1 (271-358)||(37517101-37517188)
chr1 (290-373)||(39976130-39976213)
chr1 (335-374)||(40303998-40304037)
chr1 (128-171)||(41195348-41195391)
chr1 (128-171)||(51695638-51695681)
chr1 (196-242)||(836390-836436)
chr1 (205-291)||(1510312-1510398)
chr1 (324-374)||(2295292-2295342)
chr1 (332-362)||(14385724-14385754)
chr1 (196-230)||(15477551-15477585)
chr1 (334-372)||(22416832-22416870)
chr1 (128-158)||(51688578-51688608)
chr1 (325-374)||(15477655-15477704)
chr1 (125-158)||(29904630-29904663)
chr1 (335-368)||(37416917-37416950)
chr1 (289-374)||(37617384-37617469)
chr1 (128-157)||(39906525-39906554)
chr1 (129-157)||(836491-836519)
chr1 (335-371)||(2832084-2832120)
chr1 (343-375)||(3319864-3319896)
chr1 (128-156)||(3887760-3887788)
chr1 (290-362)||(10233579-10233651)
chr1 (336-368)||(15515669-15515701)
chr1 (335-375)||(21002267-21002307)
chr1 (335-375)||(24502740-24502780)
chr1 (128-160)||(24562468-24562500)
chr1 (202-242)||(33186245-33186285)
chr1 (128-160)||(33541873-33541905)
chr1 (128-156)||(37473272-37473300)
chr1 (128-172)||(37617555-37617599)
chr1 (324-368)||(38116002-38116046)
chr1 (128-160)||(38189658-38189690)
chr1 (324-384)||(41162959-41163019)
chr1 (128-160)||(41505560-41505592)
chr1 (128-171)||(48064191-48064235)
chr1 (128-160)||(51190730-51190762)
[»] chr5 (59 HSPs)
chr5 (202-374)||(16937802-16937974)
chr5 (210-375)||(12857256-12857421)
chr5 (237-374)||(7705917-7706054)
chr5 (202-337)||(16457935-16458070)
chr5 (199-374)||(10639929-10640104)
chr5 (202-361)||(29925820-29925978)
chr5 (202-374)||(34102232-34102405)
chr5 (233-375)||(12857623-12857765)
chr5 (205-378)||(32009674-32009848)
chr5 (290-374)||(11700229-11700313)
chr5 (204-363)||(29815025-29815176)
chr5 (264-374)||(6521118-6521229)
chr5 (202-309)||(12554498-12554604)
chr5 (324-371)||(22209746-22209793)
chr5 (128-171)||(32372497-32372540)
chr5 (271-373)||(9107138-9107240)
chr5 (122-171)||(24030556-24030605)
chr5 (290-374)||(15246900-15246984)
chr5 (290-374)||(34736446-34736530)
chr5 (202-373)||(39105443-39105615)
chr5 (210-374)||(43300865-43301029)
chr5 (128-171)||(28776858-28776901)
chr5 (128-171)||(40426635-40426678)
chr5 (290-377)||(41419386-41419473)
chr5 (290-372)||(6096614-6096696)
chr5 (196-363)||(12425544-12425713)
chr5 (291-377)||(41534506-41534592)
chr5 (128-169)||(3520304-3520345)
chr5 (302-362)||(15015922-15015982)
chr5 (294-374)||(35445763-35445843)
chr5 (331-375)||(39594915-39594959)
chr5 (290-362)||(41535448-41535520)
chr5 (291-362)||(3520645-3520716)
chr5 (331-370)||(9202671-9202710)
chr5 (128-171)||(13697913-13697956)
chr5 (335-374)||(14331478-14331517)
chr5 (196-231)||(31051866-31051901)
chr5 (300-374)||(32941546-32941621)
chr5 (290-372)||(7674714-7674796)
chr5 (335-377)||(14980621-14980663)
chr5 (300-374)||(32010022-32010096)
chr5 (128-170)||(34736671-34736713)
chr5 (341-374)||(6715870-6715903)
chr5 (335-372)||(10771809-10771846)
chr5 (333-374)||(11353050-11353091)
chr5 (333-374)||(11374303-11374344)
chr5 (128-157)||(12433538-12433567)
chr5 (327-360)||(17560380-17560413)
chr5 (297-362)||(32372686-32372751)
chr5 (128-160)||(3735656-3735688)
chr5 (196-268)||(6587132-6587204)
chr5 (335-375)||(8820872-8820912)
chr5 (128-160)||(9202903-9202935)
chr5 (128-160)||(12554336-12554368)
chr5 (342-374)||(14932415-14932447)
chr5 (129-169)||(21583644-21583684)
chr5 (332-380)||(26005111-26005159)
chr5 (135-171)||(32703592-32703628)
chr5 (335-375)||(35960524-35960564)
[»] chr7 (61 HSPs)
chr7 (205-359)||(34744010-34744164)
chr7 (202-374)||(19302482-19302650)
chr7 (202-354)||(19022524-19022676)
chr7 (212-378)||(11619073-11619239)
chr7 (205-358)||(420342-420495)
chr7 (196-361)||(33601342-33601506)
chr7 (197-362)||(33678754-33678919)
chr7 (196-374)||(4970711-4970890)
chr7 (203-362)||(27863656-27863815)
chr7 (201-357)||(33601963-33602118)
chr7 (196-268)||(43694595-43694667)
chr7 (261-374)||(33266405-33266516)
chr7 (196-266)||(46280299-46280369)
chr7 (208-373)||(49019853-49020019)
chr7 (272-373)||(34464141-34464242)
chr7 (335-375)||(1418531-1418571)
chr7 (290-374)||(5947308-5947392)
chr7 (290-374)||(34035984-34036068)
chr7 (202-362)||(48470023-48470183)
chr7 (336-375)||(17988951-17988990)
chr7 (340-378)||(4966276-4966314)
chr7 (196-374)||(17944262-17944440)
chr7 (196-314)||(30570910-30571028)
chr7 (300-374)||(36517654-36517728)
chr7 (126-171)||(28900758-28900803)
chr7 (129-170)||(33552966-33553007)
chr7 (324-372)||(9210922-9210970)
chr7 (128-160)||(18865215-18865247)
chr7 (136-172)||(39907710-39907746)
chr7 (196-304)||(45264068-45264176)
chr7 (128-172)||(47177519-47177563)
chr7 (336-371)||(529475-529510)
chr7 (128-171)||(11619340-11619383)
chr7 (324-375)||(22283564-22283615)
chr7 (206-297)||(38138475-38138566)
chr7 (202-372)||(45338428-45338602)
chr7 (128-171)||(46139825-46139868)
chr7 (260-362)||(3927941-3928043)
chr7 (335-373)||(7513671-7513709)
chr7 (300-378)||(20526523-20526601)
chr7 (132-166)||(22296364-22296398)
chr7 (126-172)||(33266621-33266667)
chr7 (332-374)||(34083527-34083569)
chr7 (196-241)||(119883-119928)
chr7 (327-360)||(14768194-14768227)
chr7 (317-362)||(20234554-20234599)
chr7 (337-374)||(30134246-30134283)
chr7 (325-374)||(44822060-44822109)
chr7 (197-314)||(45790405-45790521)
chr7 (335-375)||(753126-753166)
chr7 (342-378)||(11782958-11782994)
chr7 (305-361)||(18765366-18765422)
chr7 (225-361)||(21196271-21196406)
chr7 (335-363)||(22759273-22759301)
chr7 (128-164)||(27863858-27863894)
chr7 (128-156)||(28210328-28210356)
chr7 (210-314)||(28614420-28614524)
chr7 (128-160)||(30571088-30571120)
chr7 (334-374)||(40371573-40371613)
chr7 (128-156)||(40377997-40378025)
chr7 (338-374)||(40598404-40598440)
[»] chr8 (48 HSPs)
chr8 (196-361)||(26771238-26771403)
chr8 (196-374)||(10758176-10758353)
chr8 (202-362)||(18133635-18133795)
chr8 (196-363)||(35534543-35534708)
chr8 (324-375)||(9130237-9130288)
chr8 (202-374)||(38602312-38602478)
chr8 (196-362)||(12976186-12976351)
chr8 (202-363)||(27028810-27028971)
chr8 (273-374)||(36963273-36963374)
chr8 (286-361)||(41589649-41589724)
chr8 (260-362)||(35643919-35644021)
chr8 (290-374)||(14280340-14280425)
chr8 (197-374)||(30251373-30251550)
chr8 (300-372)||(43717855-43717927)
chr8 (331-374)||(27493045-27493088)
chr8 (290-373)||(31716147-31716230)
chr8 (296-374)||(34849176-34849255)
chr8 (336-374)||(9700114-9700152)
chr8 (129-171)||(9956956-9956998)
chr8 (290-372)||(32840907-32840989)
chr8 (196-362)||(38648324-38648490)
chr8 (290-362)||(1058008-1058080)
chr8 (324-372)||(12496993-12497041)
chr8 (128-160)||(14956460-14956492)
chr8 (197-241)||(16734003-16734047)
chr8 (128-160)||(29819045-29819077)
chr8 (331-379)||(42052151-42052199)
chr8 (207-314)||(12010870-12010977)
chr8 (128-171)||(40981003-40981046)
chr8 (335-374)||(42215219-42215258)
chr8 (331-374)||(42893409-42893452)
chr8 (235-374)||(43045644-43045783)
chr8 (335-374)||(44236742-44236781)
chr8 (336-374)||(10075472-10075510)
chr8 (272-370)||(28763417-28763515)
chr8 (202-248)||(38750337-38750383)
chr8 (204-340)||(6881908-6882044)
chr8 (128-157)||(27752435-27752464)
chr8 (128-157)||(34236045-34236074)
chr8 (286-375)||(44792719-44792808)
chr8 (132-172)||(1929954-1929994)
chr8 (342-378)||(7711966-7712002)
chr8 (210-242)||(11861791-11861823)
chr8 (335-375)||(14926900-14926940)
chr8 (128-160)||(18133559-18133591)
chr8 (202-230)||(29205787-29205815)
chr8 (342-374)||(37461260-37461292)
chr8 (202-314)||(37945576-37945687)
[»] chr4 (62 HSPs)
chr4 (202-374)||(17822784-17822956)
chr4 (216-374)||(54426036-54426194)
chr4 (207-374)||(21731575-21731742)
chr4 (204-310)||(7839344-7839450)
chr4 (196-375)||(41336733-41336912)
chr4 (196-374)||(53294033-53294211)
chr4 (202-347)||(50681035-50681180)
chr4 (196-372)||(22030176-22030352)
chr4 (207-374)||(2244032-2244202)
chr4 (271-373)||(15173223-15173325)
chr4 (210-374)||(49940086-49940252)
chr4 (213-314)||(50662717-50662818)
chr4 (260-375)||(24169300-24169415)
chr4 (225-380)||(39603084-39603238)
chr4 (288-373)||(2386522-2386607)
chr4 (128-169)||(44863108-44863149)
chr4 (202-314)||(20108988-20109100)
chr4 (290-370)||(39011051-39011131)
chr4 (128-171)||(17204011-17204054)
chr4 (331-374)||(27043749-27043792)
chr4 (128-171)||(47119089-47119132)
chr4 (299-372)||(22538998-22539071)
chr4 (324-374)||(39691068-39691118)
chr4 (128-170)||(49202529-49202571)
chr4 (294-372)||(52315118-52315196)
chr4 (210-334)||(46588032-46588157)
chr4 (290-374)||(437083-437167)
chr4 (294-374)||(35571550-35571630)
chr4 (286-374)||(42403942-42404029)
chr4 (290-362)||(49939882-49939954)
chr4 (196-267)||(9760413-9760484)
chr4 (128-171)||(25904368-25904411)
chr4 (209-268)||(33586980-33587039)
chr4 (126-169)||(39603587-39603630)
chr4 (128-159)||(45935379-45935410)
chr4 (202-241)||(54069469-54069508)
chr4 (335-373)||(2977896-2977934)
chr4 (336-374)||(18512434-18512472)
chr4 (324-374)||(18815124-18815174)
chr4 (126-160)||(20108910-20108944)
chr4 (336-374)||(24193645-24193683)
chr4 (261-363)||(25904153-25904255)
chr4 (211-281)||(39691155-39691225)
chr4 (126-160)||(44248739-44248773)
chr4 (336-374)||(46187828-46187866)
chr4 (126-171)||(3155484-3155529)
chr4 (128-165)||(4212815-4212852)
chr4 (127-156)||(22030091-22030120)
chr4 (290-374)||(27123271-27123356)
chr4 (128-165)||(27330185-27330222)
chr4 (202-247)||(31076432-31076477)
chr4 (325-374)||(41512741-41512790)
chr4 (128-165)||(44797765-44797802)
chr4 (128-157)||(50662890-50662919)
chr4 (344-384)||(17975246-17975286)
chr4 (128-172)||(25885758-25885802)
chr4 (335-375)||(29126181-29126221)
chr4 (273-341)||(30668320-30668387)
chr4 (128-160)||(43505831-43505863)
chr4 (127-171)||(44138441-44138485)
chr4 (286-314)||(45622303-45622331)
chr4 (302-362)||(49003973-49004033)
[»] chr2 (59 HSPs)
chr2 (220-374)||(26202025-26202179)
chr2 (204-354)||(43279466-43279616)
chr2 (196-361)||(15757590-15757756)
chr2 (279-375)||(30331807-30331903)
chr2 (202-360)||(32592566-32592723)
chr2 (210-374)||(20952342-20952506)
chr2 (260-374)||(15305711-15305825)
chr2 (293-374)||(27317449-27317530)
chr2 (196-354)||(18066101-18066259)
chr2 (196-358)||(41851508-41851670)
chr2 (290-372)||(42419860-42419942)
chr2 (290-374)||(449914-449998)
chr2 (288-374)||(2142719-2142805)
chr2 (202-300)||(39073682-39073780)
chr2 (196-361)||(1625873-1626038)
chr2 (290-374)||(4606992-4607076)
chr2 (196-284)||(12464482-12464570)
chr2 (324-380)||(18179050-18179106)
chr2 (127-171)||(26626758-26626802)
chr2 (290-362)||(42659142-42659214)
chr2 (335-374)||(15370242-15370281)
chr2 (272-374)||(23974412-23974514)
chr2 (298-367)||(21828037-21828106)
chr2 (126-171)||(27695741-27695786)
chr2 (202-375)||(41812010-41812181)
chr2 (128-164)||(1633707-1633743)
chr2 (324-372)||(9174916-9174964)
chr2 (302-362)||(29628673-29628733)
chr2 (202-374)||(39659428-39659600)
chr2 (128-160)||(40835437-40835469)
chr2 (128-172)||(43036513-43036557)
chr2 (324-375)||(3312178-3312229)
chr2 (128-171)||(43570299-43570342)
chr2 (336-374)||(2964728-2964766)
chr2 (126-168)||(16451019-16451061)
chr2 (293-374)||(26143561-26143640)
chr2 (128-170)||(26143785-26143827)
chr2 (207-277)||(27695611-27695681)
chr2 (331-372)||(1633421-1633462)
chr2 (205-310)||(5745768-5745873)
chr2 (337-374)||(6772452-6772489)
chr2 (128-157)||(7043880-7043909)
chr2 (205-297)||(12194933-12195026)
chr2 (335-372)||(28803451-28803488)
chr2 (128-157)||(41449791-41449820)
chr2 (126-171)||(41851406-41851451)
chr2 (128-160)||(2416196-2416228)
chr2 (344-384)||(3078517-3078557)
chr2 (128-156)||(9174697-9174725)
chr2 (334-374)||(9886416-9886456)
chr2 (132-160)||(27317276-27317304)
chr2 (131-171)||(28206143-28206183)
chr2 (131-171)||(32592463-32592503)
chr2 (334-374)||(33942017-33942057)
chr2 (128-160)||(39659673-39659705)
chr2 (128-160)||(40279084-40279116)
chr2 (128-160)||(41516874-41516906)
chr2 (128-160)||(41812239-41812271)
chr2 (128-171)||(41880646-41880690)
[»] chr6 (34 HSPs)
chr6 (286-374)||(4163216-4163304)
chr6 (286-374)||(4224837-4224925)
chr6 (292-372)||(26559160-26559241)
chr6 (205-374)||(6536597-6536763)
chr6 (272-374)||(31623599-31623701)
chr6 (286-362)||(30926582-30926658)
chr6 (260-374)||(848026-848139)
chr6 (290-375)||(9559459-9559542)
chr6 (126-160)||(10645484-10645518)
chr6 (199-253)||(11784070-11784124)
chr6 (337-374)||(9202904-9202941)
chr6 (325-374)||(21405073-21405122)
chr6 (196-240)||(6909925-6909969)
chr6 (290-374)||(34404645-34404729)
chr6 (331-374)||(835180-835223)
chr6 (128-171)||(6538390-6538433)
chr6 (202-253)||(6538491-6538542)
chr6 (129-160)||(9632785-9632816)
chr6 (291-374)||(10645304-10645387)
chr6 (196-307)||(34430447-34430558)
chr6 (290-374)||(2460070-2460155)
chr6 (196-313)||(2735042-2735159)
chr6 (335-372)||(12111079-12111116)
chr6 (290-347)||(20368127-20368184)
chr6 (294-374)||(20861617-20861698)
chr6 (132-165)||(35069439-35069472)
chr6 (202-242)||(415283-415323)
chr6 (345-373)||(738461-738489)
chr6 (201-241)||(8201211-8201251)
chr6 (128-160)||(24626168-24626200)
chr6 (202-242)||(24626274-24626314)
chr6 (290-354)||(30536570-30536634)
chr6 (290-381)||(31624324-31624418)
chr6 (342-374)||(31776191-31776223)
[»] scaffold0018 (1 HSPs)
scaffold0018 (128-172)||(157980-158024)
[»] scaffold0050 (1 HSPs)
scaffold0050 (128-160)||(58477-58509)


Alignment Details
Target: chr3 (Bit Score: 241; Significance: 1e-133; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 196 - 463
Target Start/End: Complemental strand, 24684920 - 24684652
Alignment:
Q  196 ataaaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaa-tcttgtgcaaattgtca 294  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  24684920 ataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataagacgaaaaaaatcttgtgcaaattgtca 24684821  T
Q  295 taagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaacaaaccttatgtcctttttgga 394  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24684820 taagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaacaaaccttatgtcctttttgga 24684721  T
Q  395 agcagagaacttaatcaagttatagtttcttgtaatttatgatcatattccacttttccagtttagttg 463  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  24684720 agcagagaacttaatcaagttatagtttcttttaatttatgatcatattccacttttccggtttagttg 24684652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 202 - 359
Target Start/End: Original strand, 30443872 - 30444029
Alignment:
Q  202 ttaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttg 301  Q
    |||||||| |||||||||||||||||| || |||||||| | |||| ||||| |||  |||||||||  ||||||| |||||| ||||||||||||| ||    
T  30443872 ttaaattgcttttgtatatgctataagctgtttttataaactatattggagaacttatgaaaataagctgaaaaaagcttgtgaaaattgtcataagctg 30443971  T
Q  302 ttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaat 359  Q
    |||||||||| || ||||||  ||||||  ||| ||||||||||||||||||||||||    
T  30443972 ttttcataagctctaccaaacagtctcaccaaatttatgccagtagataagctcaaat 30444029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 202 - 374
Target Start/End: Original strand, 20880455 - 20880627
Alignment:
Q  202 ttaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttg 301  Q
    ||||||||||||||||||||||||||  || ||||| |||| |||| ||||| |||  |||||||||   |||||| ||| || ||||||||||||| ||    
T  20880455 ttaaattgtttttgtatatgctataaactgtttttaaaagctatattggagaacttatgaaaataagctcaaaaaagcttatgaaaattgtcataagctg 20880554  T
Q  302 ttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||||||| ||||  |||||  |||| |  |||||||||| ||||||||||||||||||||  ||||||||||    
T  20880555 ttttcataggttctcccaaatagtctaaggaaacttatgcaagtagataagctcaaataagccaatccaaaca 20880627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 202 - 374
Target Start/End: Original strand, 39980708 - 39980880
Alignment:
Q  202 ttaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttg 301  Q
    |||||||||||||| | ||||||||||||| |||||||||| |||| ||||| |||  |||||||||  ||||||| ||| || ||   |||||||| ||    
T  39980708 ttaaattgtttttgaacatgctataagttgtttttataagctatattggagaacttatgaaaataagttgaaaaaagcttatgaaaccagtcataagctg 39980807  T
Q  302 ttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||||||||||||    |||  |||||| ||||||||||| |||||||||||||||| |||  ||||||||||    
T  39980808 ttttcataagttctcttaaacagtctcacaaaacttatgctagtagataagctcaaacaagccaatccaaaca 39980880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 197 - 362
Target Start/End: Complemental strand, 36631147 - 36630982
Alignment:
Q  197 taaaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcata 296  Q
    |||| |||||||||||||||| ||||||||||||| |||||| ||| |||| ||||| |||  |||||||||  ||||||| ||| || |||| ||||||    
T  36631147 taaagttaaattgtttttgtacatgctataagttgtttttatgagctatattggagaacttatgaaaataagcagaaaaaagcttttgaaaatcgtcata 36631048  T
Q  297 agttgttttcataagtt-caaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataag 362  Q
    || || ||||||||||| |  | ||| |||||||  ||||| ||||||||  |||||||||||||||    
T  36631047 agctggtttcataagttccctctaaactgtctcacgaaactaatgccagt-tataagctcaaataag 36630982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 196 - 372
Target Start/End: Original strand, 21367640 - 21367816
Alignment:
Q  196 ataaaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcat 295  Q
    ||||| |||||||||||| |||||   ||||||||| ||| |||||| || | ||||| |||  |||||||||  ||||| | |||||| | | ||||||    
T  21367640 ataaagttaaattgttttcgtataatgtataagttgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttgtgaacaatgtcat 21367739  T
Q  296 aagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaa 372  Q
    ||| |||||||||||||||  |||||  ||| || |||||||||||  |||||||| ||||||||||  ||||||||    
T  21367740 aagctgttttcataagttctcccaaacagtcccacaaaacttatgctggtagataatctcaaataagccaatccaaa 21367816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 271 - 362
Target Start/End: Complemental strand, 31365210 - 31365119
Alignment:
Q  271 gaaaaaatcttgtgcaaattgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataag 362  Q
    ||||||| ||| || ||||||||||||| || ||||||||||||  |||||  |||||| ||||||||||||| ||||||||||||||||||    
T  31365210 gaaaaaagcttatgaaaattgtcataagctgctttcataagttctcccaaacagtctcacaaaacttatgccaatagataagctcaaataag 31365119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 196 - 374
Target Start/End: Original strand, 20257508 - 20257688
Alignment:
Q  196 ataaaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgag-aaaataaggcgaaaaaatcttgtgcaaattgtca 294  Q
    ||||| |||||||||||||||||||||||||||||| ||||  |||| |||| ||||| |||  | ||||||||    ||||| ||| || |||||||||    
T  20257508 ataaagttaaattgtttttgtatatgctataagttgttttttgaagctatattggagagcttatgaaaaataagttttaaaaaacttatgaaaattgtca 20257607  T
Q  295 taagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagat-aagctcaaataagttaatccaaaca 374  Q
    | || || ||||||||||||  |||||  |||||| |||| ||||| | |||||| || ||||||||||  ||||||||||    
T  20257608 ttagctgctttcataagttctcccaaacagtctcacaaaatttatggctgtagataaaactcaaataagccaatccaaaca 20257688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 202 - 362
Target Start/End: Complemental strand, 13715665 - 13715503
Alignment:
Q  202 ttaaattgtttttgtatatgctataagttgcttt--tataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagt 299  Q
    |||| ||| ||||||||||| ||||||||| |||  ||||||| |||| ||| | |||  |||||||||  ||||||  ||| || || ||||||||||     
T  13715665 ttaatttgattttgtatatgatataagttgtttttatataagcgatattggacaacttatgaaaataagttgaaaaatgcttatgaaagttgtcataagc 13715566  T
Q  300 tgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataag 362  Q
    ||||||   |||||| ||||||  |||||| ||||| ||||| |||||||||| |||||||||    
T  13715565 tgttttaggaagttctaccaaacagtctcacaaaacatatgctagtagataagatcaaataag 13715503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 204 - 371
Target Start/End: Original strand, 37689212 - 37689377
Alignment:
Q  204 aaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttgtt 303  Q
    ||||||||||||||||||||||| |||| |||||| ||  ||||| |||  |||  |||||||||  ||||||| ||| || ||||||||||||| ||||    
T  37689212 aaattgtttttgtatatgctataggttgtttttatgag-tatatcagagcacttatgaaaataagttgaaaaaagctt-tgaaaattgtcataagctgtt 37689309  T
Q  304 ttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaa 371  Q
    ||| |||||||  ||| |  || ||| | ||| |||  ||||| ||||||||||||||| ||||||||    
T  37689310 ttcttaagttctcccatacagtatcacagaacctatttcagtaaataagctcaaataagctaatccaa 37689377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 47132308 - 47132361
Alignment:
Q  200 aattaaattgtttttgtatatgctataagttgcttttataagcaatatcggaga 253  Q
    ||||||||||||||||||||||||||| |||| |||||||||| |||| |||||    
T  47132308 aattaaattgtttttgtatatgctataggttgtttttataagctatattggaga 47132361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 373
Target Start/End: Complemental strand, 24085338 - 24085258
Alignment:
Q  293 cataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaac 373  Q
    |||||| |||||||||||||||  | ||   |||||| |||||||||||| |||||||||||||||||||  |||||||||    
T  24085338 cataagctgttttcataagttctccaaaccagtctcacaaaacttatgccggtagataagctcaaataagccaatccaaac 24085258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 290 - 362
Target Start/End: Complemental strand, 46778194 - 46778122
Alignment:
Q  290 tgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataag 362  Q
    |||||||||||||||||||||||||  |||||  || ||| |||| |||||||| || |||||||||||||||    
T  46778194 tgtcataagttgttttcataagttctcccaaacggtttcacaaaatttatgccactaaataagctcaaataag 46778122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 210 - 361
Target Start/End: Complemental strand, 18405914 - 18405763
Alignment:
Q  210 tttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttgttttcata 309  Q
    |||||||||||||||||||||| ||| |||||| || | ||||| |||  |||| ||||    |||||  || || ||| |||| | |  ||||||||||    
T  18405914 tttttgtatatgctataagttgttttcataagctatcttggagaacttatgaaattaagcttgaaaaagattatgaaaagtgtcgtgaactgttttcata 18405815  T
Q  310 agttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataa 361  Q
    |||||   ||||  |||||| |||||||||| ||||||||||||||||||||    
T  18405814 agttcttgcaaacagtctcacaaaacttatgtcagtagataagctcaaataa 18405763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 124 - 163
Target Start/End: Complemental strand, 50946443 - 50946404
Alignment:
Q  124 attatttggataaacaacttatttgcagcttatagcagaa 163  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  50946443 attatttggatatacaacttatttgcagcttatagcagaa 50946404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 373
Target Start/End: Original strand, 584118 - 584196
Alignment:
Q  295 taagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaac 373  Q
    |||| ||||||||||| |||  | |||  |||||| | ||||||||| ||||||||||||||||||||| |||||||||    
T  584118 taagctgttttcataaattctccaaaacagtctcacagaacttatgctagtagataagctcaaataagtcaatccaaac 584196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 377
Target Start/End: Complemental strand, 1288807 - 1288765
Alignment:
Q  335 cttatgccagtagataagctcaaataagttaatccaaacaaac 377  Q
    ||||||||||| ||||||||||||||||| |||||||||||||    
T  1288807 cttatgccagttgataagctcaaataagtcaatccaaacaaac 1288765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 374
Target Start/End: Complemental strand, 25447214 - 25447164
Alignment:
Q  324 gtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||||| |||||||||| |||||||||| ||||||||||| ||||||||||    
T  25447214 gtctcacaaaacttatgtcagtagataaactcaaataagtcaatccaaaca 25447164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 350
Target Start/End: Complemental strand, 53789557 - 53789406
Alignment:
Q  197 taaaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcata 296  Q
    |||||||||| |||||| ||||||||||||||||| | | |||||| ||   ||||| |||  |||| ||||  ||||||| ||| || ||| |||||||    
T  53789557 taaaattaaaatgttttggtatatgctataagttgttatcataagctatcatggagaacttatgaaattaagctgaaaaaagcttatgaaaagtgtcata 53789458  T
Q  297 agttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagata 350  Q
    || ||||| || ||||||   ||||  |||||| |||||||||| |||||||||    
T  53789457 agctgtttccaaaagttctctcaaa--gtctcacaaaacttatgtcagtagata 53789406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 206 - 310
Target Start/End: Original strand, 49556840 - 49556945
Alignment:
Q  206 attgtttttgtatat-gctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttgttt 304  Q
    ||||||||||||||| ||| | ||||| ||||||| || |||  ||||  |||||| |||||||  ||||||| ||| || ||||||||||||| |||||    
T  49556840 attgtttttgtatatcgctttgagttgtttttataggctatactggaggacttgaggaaataagttgaaaaaagcttatgaaaattgtcataagctgttt 49556939  T
Q  305 tcataa 310  Q
    ||||||    
T  49556940 tcataa 49556945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 160
Target Start/End: Original strand, 849555 - 849587
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagca 160  Q
    |||||||||||||||||||||||||||||||||    
T  849555 tttggataaacaacttatttgcagcttatagca 849587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 290 - 374
Target Start/End: Original strand, 22203497 - 22203580
Alignment:
Q  290 tgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||||||||| |||||||||||||||  |||||  |||||| |||| | ||| | |||||||||||| |||| |||||||||||||    
T  22203497 tgtcataagctgttttcataagttct-ccaaacagtctcacaaaattaatgtcggtagataagctcgaatatgttaatccaaaca 22203580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 362
Target Start/End: Complemental strand, 31365316 - 31365240
Alignment:
Q  286 aaattgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataag 362  Q
    ||||||||||||| ||| |||||||||||  |||||  || ||| |||| |||||||| ||||||| ||||||||||    
T  31365316 aaattgtcataagctgtattcataagttctcccaaacagtgtcacaaaaattatgccaatagataaactcaaataag 31365240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 196 - 300
Target Start/End: Original strand, 36189539 - 36189642
Alignment:
Q  196 ataaaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcat 295  Q
    ||||| |||||||||||||||||||| |||||| |  |||||||||  |||| ||||| |||  ||||||||  | | |||| |||||| ||||||||||    
T  36189539 ataaagttaaattgtttttgtatatgatataagctatttttataagatatattggagaacttatgaaaataa-accataaaagcttgtgaaaattgtcat 36189637  T
Q  296 aagtt 300  Q
    |||||    
T  36189638 aagtt 36189642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 160
Target Start/End: Complemental strand, 46886884 - 46886852
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagca 160  Q
    |||||||||||||||||||||||||||||||||    
T  46886884 tttggataaacaacttatttgcagcttatagca 46886852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 3845759 - 3845716
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagcagaagcacttat 171  Q
    |||||||||||||||||||||||| | |||||| ||||||||||    
T  3845759 tttggataaacaacttatttgcagttcatagcacaagcacttat 3845716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 374
Target Start/End: Complemental strand, 16073003 - 16072960
Alignment:
Q  331 aaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||||||||| || ||||||||||||||||||| ||||||||||    
T  16073003 aaaacttatgtcattagataagctcaaataagtcaatccaaaca 16072960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 202 - 237
Target Start/End: Original strand, 20170502 - 20170537
Alignment:
Q  202 ttaaattgtttttgtatatgctataagttgctttta 237  Q
    |||||||||||||||||||||||||||||| |||||    
T  20170502 ttaaattgtttttgtatatgctataagttgttttta 20170537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 374
Target Start/End: Complemental strand, 21872253 - 21872214
Alignment:
Q  335 cttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||||| ||||||||||| |||||||||||||||||||||    
T  21872253 cttatgtcagtagataagatcaaataagttaatccaaaca 21872214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 295
Target Start/End: Complemental strand, 35959553 - 35959454
Alignment:
Q  196 ataaaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcat 295  Q
    ||||| ||||||| |||||||||||||| ||||||| || ||||||| ||||  ||||  ||  |||||||||  ||||||| ||| || ||||||||||    
T  35959553 ataaagttaaattatttttgtatatgctgtaagttgtttctataagctatattagagaatttttgaaaataagctgaaaaaagcttttgaaaattgtcat 35959454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 167
Target Start/End: Complemental strand, 36507277 - 36507238
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagcagaagcac 167  Q
    ||||||| ||||||||||||||||||||||||| ||||||    
T  36507277 tttggatgaacaacttatttgcagcttatagcacaagcac 36507238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 171
Target Start/End: Original strand, 47132250 - 47132293
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagcagaagcacttat 171  Q
    |||||||||||||||||||| || ||||||||| ||||||||||    
T  47132250 tttggataaacaacttattttcaccttatagcacaagcacttat 47132293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 202 - 253
Target Start/End: Complemental strand, 49034354 - 49034303
Alignment:
Q  202 ttaaattgtttttgtatatgctataagttgcttttataagcaatatcggaga 253  Q
    ||||||||||| || ||||||||||||||| |||||||||| |||| |||||    
T  49034354 ttaaattgtttgtgcatatgctataagttgtttttataagctatattggaga 49034303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 373
Target Start/End: Complemental strand, 51929364 - 51929277
Alignment:
Q  286 aaattgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaac 373  Q
    ||||||||||||  |||||||| || |||   ||||  || ||| |||||||||||||||| ||||| |||||||||| |||||||||    
T  51929364 aaattgtcataatctgttttcagaaattctctcaaatagtatcacaaaacttatgccagtaaataaggtcaaataagtcaatccaaac 51929277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 362
Target Start/End: Complemental strand, 22987 - 22897
Alignment:
Q  272 aaaaaatcttgtgcaaattgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataag 362  Q
    |||||| |||||| ||||| || |||| ||||||||||| |||  | |||   ||||| |||||||||||||||||| ||| |||||||||    
T  22987 aaaaaaccttgtgaaaattatcgtaagctgttttcataacttctcctaaacaatctcacaaaacttatgccagtagacaagttcaaataag 22897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 358
Target Start/End: Complemental strand, 3845532 - 3845498
Alignment:
Q  324 gtctcaaaaaacttatgccagtagataagctcaaa 358  Q
    |||||| ||||||||||||||||||||||||||||    
T  3845532 gtctcacaaaacttatgccagtagataagctcaaa 3845498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 170
Target Start/End: Original strand, 5456743 - 5456785
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagcagaagcactta 170  Q
    |||||||||  |||||||||||||||||||||| |||||||||    
T  5456743 tttggataactaacttatttgcagcttatagcataagcactta 5456785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 330 - 372
Target Start/End: Original strand, 26911698 - 26911740
Alignment:
Q  330 aaaaacttatgccagtagataagctcaaataagttaatccaaa 372  Q
    ||||||||||| |||||||||| ||||||||||| ||||||||    
T  26911698 aaaaacttatgtcagtagataaactcaaataagtcaatccaaa 26911740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 374
Target Start/End: Complemental strand, 40240778 - 40240740
Alignment:
Q  336 ttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||||| |||| |||||||||||||||||||||||||||    
T  40240778 ttatgctagtatataagctcaaataagttaatccaaaca 40240740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 313
Target Start/End: Original strand, 901897 - 902014
Alignment:
Q  196 ataaaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcat 295  Q
    |||| |||| ||| ||||| |||||| ||||  ||| |||||||||| |||| ||||| |||  |||||||||  ||||||| ||| || ||| ||| ||    
T  901897 ataacattatattatttttatatatgttatactttgtttttataagctatattggagaacttatgaaaataagttgaaaaaagcttatggaaaatgttat 901996  T
Q  296 aagttgttttcataagtt 313  Q
     || ||||||||||||||    
T  901997 tagctgttttcataagtt 902014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 157
Target Start/End: Original strand, 944366 - 944395
Alignment:
Q  128 tttggataaacaacttatttgcagcttata 157  Q
    ||||||||||||||||||||||||||||||    
T  944366 tttggataaacaacttatttgcagcttata 944395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 374
Target Start/End: Original strand, 21574556 - 21574643
Alignment:
Q  290 tgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaa---cttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||||||||||||||||||||| ||  |||||  |||||||| ||    || |||||||||||||| |||||||||| | ||||||||    
T  21574556 tgtcataagttgttttcataagctctcccaaacagtctcaaacaattgattttgccagtagataagttcaaataagtcattccaaaca 21574643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 424
Target Start/End: Complemental strand, 24653273 - 24653232
Alignment:
Q  383 gtcctttttggaagcagagaacttaatcaagttatagtttct 424  Q
    |||||||||||||| ||| ||||||| |||||||||||||||    
T  24653273 gtcctttttggaagaagataacttaaccaagttatagtttct 24653232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 374
Target Start/End: Complemental strand, 26990181 - 26990144
Alignment:
Q  337 tatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  26990181 tatgtcagtagataagctcaaataagtcaatccaaaca 26990144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 368
Target Start/End: Complemental strand, 27795971 - 27795938
Alignment:
Q  335 cttatgccagtagataagctcaaataagttaatc 368  Q
    |||||||||||||||||||||||||||| |||||    
T  27795971 cttatgccagtagataagctcaaataagctaatc 27795938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 171
Target Start/End: Original strand, 28240207 - 28240252
Alignment:
Q  126 tatttggataaacaacttatttgcagcttatagcagaagcacttat 171  Q
    ||||| |||||||||||||| |||||||||||||| |||| |||||    
T  28240207 tatttagataaacaacttatctgcagcttatagcacaagcgcttat 28240252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 231
Target Start/End: Complemental strand, 31365391 - 31365362
Alignment:
Q  202 ttaaattgtttttgtatatgctataagttg 231  Q
    ||||||||||||||||||||||||||||||    
T  31365391 ttaaattgtttttgtatatgctataagttg 31365362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 32582845 - 32582894
Alignment:
Q  331 aaaacttatgccagtagataagctcaaataagttaatccaaacaaacctt 380  Q
    ||||||||||  ||||||||| ||||||||||| |||||||||| |||||    
T  32582845 aaaacttatggtagtagataaactcaaataagtcaatccaaacatacctt 32582894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 363
Target Start/End: Complemental strand, 34610809 - 34610736
Alignment:
Q  290 tgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagt 363  Q
    |||||||||  ||||||||||||||  |||||  ||   | |||||||||| ||||||||||||||||||||||    
T  34610809 tgtcataagcagttttcataagttctcccaaatagttgtacaaaacttatgtcagtagataagctcaaataagt 34610736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 351
Target Start/End: Original strand, 37389250 - 37389311
Alignment:
Q  290 tgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataa 351  Q
    |||||||||||||||||||||||||  || ||  |||||| |||||||||| | ||||||||    
T  37389250 tgtcataagttgttttcataagttctcccgaagagtctcacaaaacttatgtctgtagataa 37389311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 374
Target Start/End: Original strand, 47132397 - 47132467
Alignment:
Q  302 ttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||||||||||||  | |||  |||||| |||||||  |||||||||||||||||||||||  ||||||||||    
T  47132397 ttttcataagttctccaaaacagtctcacaaaactt--gccagtagataagctcaaataagccaatccaaaca 47132467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 376
Target Start/End: Original strand, 50211855 - 50211888
Alignment:
Q  343 agtagataagctcaaataagttaatccaaacaaa 376  Q
    |||||||||||| |||||||||||||||||||||    
T  50211855 agtagataagctaaaataagttaatccaaacaaa 50211888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 290 - 362
Target Start/End: Original strand, 5436139 - 5436211
Alignment:
Q  290 tgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataag 362  Q
    |||||||||||||||||| ||||||  | |||  || ||| |||||||||| |||| ||||| ||||||||||    
T  5436139 tgtcataagttgttttcagaagttcttcaaaacagtgtcacaaaacttatgacagttgataaactcaaataag 5436211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 339 - 375
Target Start/End: Original strand, 22055671 - 22055706
Alignment:
Q  339 tgccagtagataagctcaaataagttaatccaaacaa 375  Q
    |||||||||||||||||||||||| ||||||||||||    
T  22055671 tgccagtagataagctcaaataag-taatccaaacaa 22055706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 160
Target Start/End: Complemental strand, 30956823 - 30956791
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagca 160  Q
    |||||||||||| ||||||||||||||||||||    
T  30956823 tttggataaacagcttatttgcagcttatagca 30956791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 160
Target Start/End: Complemental strand, 30972635 - 30972603
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagca 160  Q
    |||||||||||| ||||||||||||||||||||    
T  30972635 tttggataaacagcttatttgcagcttatagca 30972603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 331 - 371
Target Start/End: Complemental strand, 33405154 - 33405114
Alignment:
Q  331 aaaacttatgccagtagataagctcaaataagttaatccaa 371  Q
    |||||||||| |||||||||| ||||||||||| |||||||    
T  33405154 aaaacttatgtcagtagataaactcaaataagtcaatccaa 33405114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 331 - 359
Target Start/End: Original strand, 38902173 - 38902201
Alignment:
Q  331 aaaacttatgccagtagataagctcaaat 359  Q
    |||||||||||||||||||||||||||||    
T  38902173 aaaacttatgccagtagataagctcaaat 38902201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 290 - 362
Target Start/End: Complemental strand, 39602214 - 39602142
Alignment:
Q  290 tgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataag 362  Q
    ||||||||| ||| |||||||| ||  |||||  | |||| |||||| |||||||||| ||||||||||||||    
T  39602214 tgtcataagctgtcttcataagctcttccaaatagcctcacaaaactgatgccagtagctaagctcaaataag 39602142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 293 - 361
Target Start/End: Complemental strand, 46886692 - 46886624
Alignment:
Q  293 cataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataa 361  Q
    |||||| ||||||||| || ||| |||||  |||||  |||| ||||||||| ||||||||||||||||    
T  46886692 cataagctgttttcatcagctcacccaaacagtctctcaaaatttatgccagcagataagctcaaataa 46886624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 175; Significance: 5e-94; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 57 - 231
Target Start/End: Complemental strand, 27970531 - 27970357
Alignment:
Q  57 gtgattgtgaatttaagctagtggttgagttgattttgtcgtgtcattgatttatcattagcaagagattatttggataaacaacttatttgcagcttat 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27970531 gtgattgtgaatttaagctagtggttgagttgattttgtcgtgtcattgatttatcattagcaagagattatttggataaacaacttatttgcagcttat 27970432  T
Q  157 agcagaagcacttatgcttgtgtataagcttacacaagcataaaattaaattgtttttgtatatgctataagttg 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27970431 agcagaagcacttatgcttgtgtataagcttacacaagcataaaattaaattgtttttgtatatgctataagttg 27970357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 202 - 374
Target Start/End: Complemental strand, 3234106 - 3233934
Alignment:
Q  202 ttaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttg 301  Q
    |||||||||||||||||||||||||||||| |||||||||| |||| ||||| |||  |||||||||  ||||||| ||| || ||| ||| ||||||||    
T  3234106 ttaaattgtttttgtatatgctataagttgtttttataagctatattggagaacttatgaaaataagtagaaaaaaacttatgaaaactgttataagttg 3234007  T
Q  302 ttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||||||||||||  || ||  |||||| |||||||| | || ||||||||||||||||||| ||||||||||    
T  3234006 ttttcataagttctccctaacagtctcacaaaacttacggcactagataagctcaaataagtcaatccaaaca 3233934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 198 - 362
Target Start/End: Original strand, 2295074 - 2295235
Alignment:
Q  198 aaaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataa 297  Q
    |||||||||||||||||||||||||||   | |  |||||||||| ||||| |||| |||| |||||||||  ||| | | ||| || ||||||||||||    
T  2295074 aaaattaaattgtttttgtatatgcta---gctatttttataagctatatcagagaacttgtgaaaataagttgaatagagcttatgaaaattgtcataa 2295170  T
Q  298 gttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataag 362  Q
    | |||||||||||||||  |||||  |||||| ||||||||||||||||||||||||||||||||    
T  2295171 gctgttttcataagttctcccaaacagtctcacaaaacttatgccagtagataagctcaaataag 2295235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 196 - 362
Target Start/End: Original strand, 473137 - 473302
Alignment:
Q  196 ataaaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcat 295  Q
    ||||| |||||||||||| || |||||||||||||| |||||||||   ||| ||||| |||  |||||||||  ||||||| ||| || ||||||| ||    
T  473137 ataaagttaaattgttttcgtgtatgctataagttgtttttataagttctattggagaacttatgaaaataagttgaaaaaagcttatgaaaattgt-at 473235  T
Q  296 aagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataag 362  Q
    ||| | |||||||||||||  ||||||||| ||| | |||||||||||||||||| |||||||||||    
T  473236 aagcttttttcataagttctcccaaaatgtttcacagaacttatgccagtagataggctcaaataag 473302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 196 - 374
Target Start/End: Complemental strand, 14576750 - 14576573
Alignment:
Q  196 ataaaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcat 295  Q
    ||||| |||||||||||||||||||||||||| ||  |||||||||| ||||  |||| |||  |||||||||  ||||||| ||| || ||||||||||    
T  14576750 ataaagttaaattgtttttgtatatgctataatttttttttataagctatattagagaactt-tgaaaataagctgaaaaaagcttttgaaaattgtcat 14576652  T
Q  296 aagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||| |||||||| |||||   |||||  ||  || |||| ||| |||||||||||||||||||||||  ||||||||||    
T  14576651 aagctgttttcacaagttgtcccaaacagtgccacaaaatttaagccagtagataagctcaaataagccaatccaaaca 14576573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 210 - 368
Target Start/End: Original strand, 49938734 - 49938892
Alignment:
Q  210 tttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttgttttcata 309  Q
    |||||||||||| ||||||||| |||||||||| ||||  |||| |||  |||||||||  ||||||| ||| || ||||||||||||| ||||||||||    
T  49938734 tttttgtatatgttataagttgtttttataagctatattagagaacttatgaaaataagttgaaaaaagcttttgaaaattgtcataagctgttttcata 49938833  T
Q  310 agttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatc 368  Q
    |||||  |||||   ||||| |||||||||||||  | |||| ||||||||||| ||||    
T  49938834 agttctcccaaacaatctcacaaaacttatgccacgatataaactcaaataagtcaatc 49938892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 202 - 314
Target Start/End: Complemental strand, 17603475 - 17603363
Alignment:
Q  202 ttaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttg 301  Q
    |||||||||||||||||||||||||||||| |||||||||| |||| ||||| |||  |||||||||  | |||||  || || ||||||||||||| ||    
T  17603475 ttaaattgtttttgtatatgctataagttgtttttataagctatattggagaacttctgaaaataagttgtaaaaagtttatgaaaattgtcataagctg 17603376  T
Q  302 ttttcataagttc 314  Q
    ||||| |||||||    
T  17603375 ttttcgtaagttc 17603363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 196 - 310
Target Start/End: Complemental strand, 24915148 - 24915034
Alignment:
Q  196 ataaaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcat 295  Q
    ||||| ||||||||||||||||||||||||||| || ||| ||||||  | | ||||| |||| |||||||||  ||||||| ||| || ||| ||||||    
T  24915148 ataaagttaaattgtttttgtatatgctataagctgttttcataagctgtcttggagaacttgtgaaaataagttgaaaaaagcttatgaaaaatgtcat 24915049  T
Q  296 aagttgttttcataa 310  Q
    |||||||||||||||    
T  24915048 aagttgttttcataa 24915034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 270 - 381
Target Start/End: Complemental strand, 50644280 - 50644167
Alignment:
Q  270 cgaaaaaatcttgtgcaaa--ttgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaat 367  Q
    |||||||| |||||| |||  ||||| ||||||||||||||||||||  |||||  |||||| ||||| ||||  ||||||||||||||||||||| |||    
T  50644280 cgaaaaaagcttgtgaaaaatttgtcgtaagttgttttcataagttctcccaaacagtctcacaaaacatatgttagtagataagctcaaataagtcaat 50644181  T
Q  368 ccaaacaaacctta 381  Q
    |||||||| |||||    
T  50644180 ccaaacaaccctta 50644167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 196 - 362
Target Start/End: Original strand, 13809971 - 13810137
Alignment:
Q  196 ataaaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcat 295  Q
    ||||| |||||||||||||||||||||||||  ||| |||||||| | ||||  |||| |||| |||||||||   | |||| ||| || ||||||||||    
T  13809971 ataaagttaaattgtttttgtatatgctatatattgtttttataaactatattagagaacttgtgaaaataagctaagaaaaacttttgaaaattgtcat 13810070  T
Q  296 aagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataag 362  Q
    ||  ||| |||||||||||    |||  |||||| |||||||| | |||||||||||| ||||||||    
T  13810071 aaactgtattcataagttctctaaaagagtctcacaaaacttacgtcagtagataagcacaaataag 13810137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 29904788 - 29904890
Alignment:
Q  260 gaaaataaggcgaaaaaatcttgtgcaaattgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaat 359  Q
    |||||||||| ||||||| ||| || |||||| |||||| |||||| ||||||||   ||||  |||||| ||||||||||| |||||||||||||||||    
T  29904788 gaaaataaggtgaaaaaagcttttgaaaattgccataagctgtttttataagttctctcaaacagtctcacaaaacttatgcaagtagataagctcaaat 29904887  T
Q  360 aag 362  Q
    |||    
T  29904888 aag 29904890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 290 - 375
Target Start/End: Complemental strand, 27146258 - 27146173
Alignment:
Q  290 tgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaacaa 375  Q
    ||||||||||||||| | |||||||  |||| | |||||| ||||||||||||| ||||||||||||||| ||| |||||||||||    
T  27146258 tgtcataagttgtttccttaagttcttccaacaagtctcacaaaacttatgccaatagataagctcaaatcagtcaatccaaacaa 27146173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 203 - 347
Target Start/End: Original strand, 7862058 - 7862202
Alignment:
Q  203 taaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttgt 302  Q
    |||||||||||||| ||||||||||| || || ||||||| |||||| ||| | | |||||||||| | || ||| |||||| ||||||||| ||| |||    
T  7862058 taaattgtttttgtctatgctataagctgtttctataagctatatcgcagaacataagaaaataagccaaagaaagcttgtgaaaattgtcagaagctgt 7862157  T
Q  303 tttcataagttcaaccaaaatgtctcaaaaaacttatgccagtag 347  Q
    ||| ||| ||||  | |||  |||| | |||||||||||||||||    
T  7862158 tttaataggttctcctaaatagtctaacaaaacttatgccagtag 7862202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 290 - 364
Target Start/End: Complemental strand, 36514679 - 36514605
Alignment:
Q  290 tgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagtt 364  Q
    ||||||||||| |||||||||||||  || ||  ||||||||||||||||| |||||||||| ||||||||||||    
T  36514679 tgtcataagttattttcataagttctccctaacagtctcaaaaaacttatggcagtagataaactcaaataagtt 36514605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 203 - 313
Target Start/End: Complemental strand, 37631649 - 37631539
Alignment:
Q  203 taaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttgt 302  Q
    |||||||||||||| |||| ||| || || |||| ||||| |||| ||||| |||  |||||||||  ||||||| |||||| ||||||||| ||| |||    
T  37631649 taaattgtttttgtgtatgatattagctgtttttgtaagctatattggagaacttatgaaaataagctgaaaaaagcttgtgaaaattgtcagaagctgt 37631550  T
Q  303 tttcataagtt 313  Q
    |||||||||||    
T  37631549 tttcataagtt 37631539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 286 - 372
Target Start/End: Original strand, 5741669 - 5741755
Alignment:
Q  286 aaattgtcataagttgttttcataagttcaaccaaaatgtctcaa-aaaacttatgccagtagataagctcaaataagttaatccaaa 372  Q
    |||||||||||||||||||||||||||||  |||||  || |||| ||||||||||| ||||| ||||||||||||||  ||||||||    
T  5741669 aaattgtcataagttgttttcataagttctcccaaacagt-tcaacaaaacttatgcaagtagttaagctcaaataagccaatccaaa 5741755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 286 - 372
Target Start/End: Original strand, 5720988 - 5721074
Alignment:
Q  286 aaattgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaa 372  Q
    ||||||||||||| |||||||||||||||  |||||  |||  | ||||||||||| ||||| ||||||||||||||  ||||||||    
T  5720988 aaattgtcataagctgttttcataagttctcccaaacagtccaacaaaacttatgcaagtagttaagctcaaataagccaatccaaa 5721074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 202 - 363
Target Start/End: Original strand, 6556950 - 6557112
Alignment:
Q  202 ttaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataag-gcgaaaaaatcttgtgcaaattgtcataagtt 300  Q
    |||||||||||||||||||| ||||||||| |||||||||  ||||   ||| |||  || ||||||    |||||| ||| || ||| ||||||||| |    
T  6556950 ttaaattgtttttgtatatgttataagttgtttttataagttatattaaagaacttatgacaataagctaaaaaaaaccttttgaaaactgtcataagct 6557049  T
Q  301 gttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagt 363  Q
     |||||||||||||   ||||  |||||| ||||||||||  |||||||||| ||||||||||    
T  6557050 attttcataagttctctcaaatagtctcacaaaacttatgttagtagataagttcaaataagt 6557112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 291 - 371
Target Start/End: Original strand, 38001663 - 38001743
Alignment:
Q  291 gtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaa 371  Q
    |||||||| |||||||||||||||  |||||  |||||| |||||||||| |||| ||||| |||||||||| | ||||||    
T  38001663 gtcataagctgttttcataagttctcccaaacagtctcacaaaacttatgtcagttgataaactcaaataagcttatccaa 38001743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 202 - 314
Target Start/End: Complemental strand, 41184741 - 41184629
Alignment:
Q  202 ttaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttg 301  Q
    |||||||||||||||||||  ||||| ||| |||||||  | |||| ||| | |||  |||||||||  ||||||| ||| || ||||||||||||| |     
T  41184741 ttaaattgtttttgtatatattataatttggttttatataccatattggaaaacttatgaaaataagttgaaaaaaacttatgaaaattgtcataagcta 41184642  T
Q  302 ttttcataagttc 314  Q
    |||||||||||||    
T  41184641 ttttcataagttc 41184629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 197 - 375
Target Start/End: Original strand, 41505660 - 41505826
Alignment:
Q  197 taaaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcata 296  Q
    |||| |||||||||||| ||||||| |||||| || |||||||||| |||| ||||| ||| | ||     ||  |||||| |||| | |||||||||||    
T  41505660 taaagttaaattgttttcgtatatgttataagctgtttttataagctatattggagaactttataagcc--ggaaaaaaaaacttgggaaaattgtcata 41505757  T
Q  297 agttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaacaa 375  Q
    || |||||||||||||||          || |||| |||||||| |||||||||||||||||||||  |||||||||||    
T  41505758 agctgttttcataagttc----------tcccaaacaacttatgtcagtagataagctcaaataagccaatccaaacaa 41505826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 46423153 - 46423197
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagcagaagcacttatg 172  Q
    |||||||||||||||||||||||||||||| || |||||||||||    
T  46423153 tttggataaacaacttatttgcagcttataacacaagcacttatg 46423197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 335 - 378
Target Start/End: Original strand, 6292604 - 6292647
Alignment:
Q  335 cttatgccagtagataagctcaaataagttaatccaaacaaacc 378  Q
    |||||| |||||||||||||||||||||| ||||||||||||||    
T  6292604 cttatgtcagtagataagctcaaataagtcaatccaaacaaacc 6292647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 290 - 372
Target Start/End: Complemental strand, 18327150 - 18327067
Alignment:
Q  290 tgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaa-cttatgccagtagataagctcaaataagttaatccaaa 372  Q
    |||||||||||||||||||||||||  |||||  || ||||||   |||||| |||||||||||||||||||||  ||||||||    
T  18327150 tgtcataagttgttttcataagttcttccaaatagtgtcaaaagtgcttatgacagtagataagctcaaataagccaatccaaa 18327067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 27820527 - 27820484
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagcagaagcacttat 171  Q
    ||||||||||||||||||||||||||||||||| |||| |||||    
T  27820527 tttggataaacaacttatttgcagcttatagcataagcgcttat 27820484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 363
Target Start/End: Complemental strand, 33204382 - 33204324
Alignment:
Q  305 tcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagt 363  Q
    ||||||||||  |||||  |||||| |||||||||| ||||||||||||||||||||||    
T  33204382 tcataagttctcccaaacagtctcacaaaacttatgtcagtagataagctcaaataagt 33204324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 170
Target Start/End: Original strand, 45855734 - 45855776
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagcagaagcactta 170  Q
    ||||||||| ||||||||||||||||||||||| |||||||||    
T  45855734 tttggataaccaacttatttgcagcttatagcacaagcactta 45855776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 374
Target Start/End: Original strand, 52014000 - 52014038
Alignment:
Q  336 ttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  52014000 ttatgccaatagataagctcaaataagttaatccaaaca 52014038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 372
Target Start/End: Original strand, 2777959 - 2778040
Alignment:
Q  291 gtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaa 372  Q
    ||||||||||| ||||||||||||  | |||  |||||| ||||||||||| | |||||||||| |||||||  ||||||||    
T  2777959 gtcataagttggtttcataagttctcctaaacagtctcacaaaacttatgcaaatagataagctaaaataagccaatccaaa 2778040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 337 - 374
Target Start/End: Original strand, 37431850 - 37431887
Alignment:
Q  337 tatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  37431850 tatgccactagataagctcaaataagttaatccaaaca 37431887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 293 - 374
Target Start/End: Original strand, 38247397 - 38247478
Alignment:
Q  293 cataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||||| |||||||||||||||  |||||  ||  || |||||||||||||||||||||| ||||||||   ||||||||||    
T  38247397 cataagctgttttcataagttctcccaaacagtgacacaaaacttatgccagtagataagttcaaataacccaatccaaaca 38247478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 210 - 314
Target Start/End: Complemental strand, 40977487 - 40977382
Alignment:
Q  210 tttttgtatatgctataag-ttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttgttttcat 308  Q
    ||||||||||||||||||| ||  |||||||||| ||||  |||| | |  |||||||||  | ||||| ||| || |||||||||||| ||||||||||    
T  40977487 tttttgtatatgctataaggttaattttataagccatataagagaacatatgaaaataagctggaaaaagcttttgaaaattgtcataaattgttttcat 40977388  T
Q  309 aagttc 314  Q
    ||||||    
T  40977387 aagttc 40977382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 209 - 298
Target Start/End: Original strand, 42174841 - 42174930
Alignment:
Q  209 gtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataag 298  Q
    ||||||||||||||||||||||| |||||||||  |||| ||||| |||  |||||||||   |||| | ||| || |||||||||||||    
T  42174841 gtttttgtatatgctataagttgtttttataagttatattggagaacttatgaaaataagttaaaaacagcttatgaaaattgtcataag 42174930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 290 - 374
Target Start/End: Complemental strand, 3887635 - 3887551
Alignment:
Q  290 tgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||||||||| |||||||||||||||  |||||  | || | ||||||||| ||| |||  |||||||||||||| ||||||||||    
T  3887635 tgtcataagatgttttcataagttcttccaaacagccttacaaaacttataccaatagtaaagctcaaataagtcaatccaaaca 3887551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 290 - 354
Target Start/End: Original strand, 14332048 - 14332112
Alignment:
Q  290 tgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagct 354  Q
    |||||||| ||||||||||||||||| || ||  |||||| ||||| |||| |||||||||||||    
T  14332048 tgtcataatttgttttcataagttcacccgaacagtctcacaaaacatatgacagtagataagct 14332112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 27976574 - 27976614
Alignment:
Q  202 ttaaattgtttttgtatatgctataagttgcttttataagc 242  Q
    |||||||||||||||||||||||||||||| ||| ||||||    
T  27976574 ttaaattgtttttgtatatgctataagttgttttcataagc 27976614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 160
Target Start/End: Complemental strand, 47499030 - 47498998
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagca 160  Q
    |||||||||||||||||||||||||||||||||    
T  47499030 tttggataaacaacttatttgcagcttatagca 47498998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 204 - 308
Target Start/End: Complemental strand, 51929628 - 51929524
Alignment:
Q  204 aaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttgtt 303  Q
    ||||||||||| |||||||  |||| || |||||||| | |||| ||||| |||  | |||||||  ||||||| ||| || ||||||||||||| ||||    
T  51929628 aaattgtttttatatatgccttaagctgtttttataaactatattggagaacttatggaaataagttgaaaaaagcttatgaaaattgtcataagctgtt 51929529  T
Q  304 ttcat 308  Q
    |||||    
T  51929528 ttcat 51929524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 374
Target Start/End: Complemental strand, 4276608 - 4276569
Alignment:
Q  335 cttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||||||||| |||||||||||||||||| ||||||||||    
T  4276608 cttatgccagaagataagctcaaataagtaaatccaaaca 4276569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 17727292 - 17727249
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagcagaagcacttat 171  Q
    |||||||||||||||||| || ||||||||||| ||||||||||    
T  17727292 tttggataaacaacttatgtgtagcttatagcacaagcacttat 17727249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 358
Target Start/End: Complemental strand, 37517188 - 37517101
Alignment:
Q  271 gaaaaaatcttgtgcaaattgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaa 358  Q
    ||||||| ||| || ||||||||||||| ||||||| |||||||   || |  |||||| ||||||||||| |||| |||||||||||    
T  37517188 gaaaaaagcttttgaaaattgtcataagctgttttcgtaagttctttcatacagtctcacaaaacttatgcaagtatataagctcaaa 37517101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 290 - 373
Target Start/End: Complemental strand, 39976213 - 39976130
Alignment:
Q  290 tgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaac 373  Q
    |||||||| || |||||||||||||   ||||  || ||| |||||||||| |||||||||| ||||||||||| | |||||||    
T  39976213 tgtcataaattattttcataagttctctcaaacagtttcacaaaacttatgtcagtagataatctcaaataagtcagtccaaac 39976130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 374
Target Start/End: Complemental strand, 40304037 - 40303998
Alignment:
Q  335 cttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||||||||||||||||| || |||||||||||||||||||    
T  40304037 cttatgccagtagataatctgaaataagttaatccaaaca 40303998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 41195391 - 41195348
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagcagaagcacttat 171  Q
    |||||||||| |||||||||||||||||||||| |||| |||||    
T  41195391 tttggataaataacttatttgcagcttatagcacaagcgcttat 41195348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 51695681 - 51695638
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagcagaagcacttat 171  Q
    |||||||||||| |||| |||||||||| |||||||||||||||    
T  51695681 tttggataaacagcttaattgcagcttacagcagaagcacttat 51695638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 836436 - 836390
Alignment:
Q  196 ataaaattaaattgtttttgtatatgctataagttgcttttataagc 242  Q
    |||||| ||||||||||||||||| ||||||||||  ||||||||||    
T  836436 ataaaactaaattgtttttgtataagctataagttatttttataagc 836390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 291
Target Start/End: Complemental strand, 1510398 - 1510312
Alignment:
Q  205 aattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattg 291  Q
    ||||||||||||||| | ||||||||| ||||||||||  ||| ||||| |||  |||||||||  ||||||| ||| || ||||||    
T  1510398 aattgtttttgtataggttataagttgtttttataagctctattggagaacttacgaaaataagttgaaaaaagcttatgaaaattg 1510312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 374
Target Start/End: Original strand, 2295292 - 2295342
Alignment:
Q  324 gtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||||| |||||||| | |||||||||||||||||||||  ||||||||||    
T  2295292 gtctcagaaaacttaagtcagtagataagctcaaataagccaatccaaaca 2295342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 362
Target Start/End: Complemental strand, 14385754 - 14385724
Alignment:
Q  332 aaacttatgccagtagataagctcaaataag 362  Q
    |||||||||||||||||||||||||||||||    
T  14385754 aaacttatgccagtagataagctcaaataag 14385724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 230
Target Start/End: Original strand, 15477551 - 15477585
Alignment:
Q  196 ataaaattaaattgtttttgtatatgctataagtt 230  Q
    ||||| |||||||||||||||||||||||||||||    
T  15477551 ataaagttaaattgtttttgtatatgctataagtt 15477585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 372
Target Start/End: Complemental strand, 22416870 - 22416832
Alignment:
Q  334 acttatgccagtagataagctcaaataagttaatccaaa 372  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  22416870 acttatgccagtagataagctcaaataagccaatccaaa 22416832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 158
Target Start/End: Original strand, 51688578 - 51688608
Alignment:
Q  128 tttggataaacaacttatttgcagcttatag 158  Q
    |||||||||||||||||||||||||||||||    
T  51688578 tttggataaacaacttatttgcagcttatag 51688608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 374
Target Start/End: Original strand, 15477655 - 15477704
Alignment:
Q  325 tctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||||| ||||||||||| ||||||||||||| ||||||  ||||||||||    
T  15477655 tctcacaaaacttatgcaagtagataagctctaataagccaatccaaaca 15477704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 158
Target Start/End: Original strand, 29904630 - 29904663
Alignment:
Q  125 ttatttggataaacaacttatttgcagcttatag 158  Q
    ||||||||||||||||||||| ||||||||||||    
T  29904630 ttatttggataaacaacttatatgcagcttatag 29904663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 368
Target Start/End: Original strand, 37416917 - 37416950
Alignment:
Q  335 cttatgccagtagataagctcaaataagttaatc 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  37416917 cttatgccactagataagctcaaataagttaatc 37416950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 374
Target Start/End: Complemental strand, 37617469 - 37617384
Alignment:
Q  289 ttgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||||| ||| ||||||||||| |||   ||||  |||||| |||||||| | || ||||||| ||||||||||| ||||||||||    
T  37617469 ttgtcaaaagctgttttcataaattctcgcaaacagtctcacaaaacttacggcaatagataaactcaaataagtcaatccaaaca 37617384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 157
Target Start/End: Original strand, 39906525 - 39906554
Alignment:
Q  128 tttggataaacaacttatttgcagcttata 157  Q
    ||||||||||||||||||||||||||||||    
T  39906525 tttggataaacaacttatttgcagcttata 39906554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 129 - 157
Target Start/End: Complemental strand, 836519 - 836491
Alignment:
Q  129 ttggataaacaacttatttgcagcttata 157  Q
    |||||||||||||||||||||||||||||    
T  836519 ttggataaacaacttatttgcagcttata 836491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 335 - 371
Target Start/End: Original strand, 2832084 - 2832120
Alignment:
Q  335 cttatgccagtagataagctcaaataagttaatccaa 371  Q
    ||||||| |||||||||||||||||||| ||||||||    
T  2832084 cttatgctagtagataagctcaaataagctaatccaa 2832120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 375
Target Start/End: Complemental strand, 3319896 - 3319864
Alignment:
Q  343 agtagataagctcaaataagttaatccaaacaa 375  Q
    ||||||||||||||||||||| |||||||||||    
T  3319896 agtagataagctcaaataagtcaatccaaacaa 3319864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 156
Target Start/End: Complemental strand, 3887788 - 3887760
Alignment:
Q  128 tttggataaacaacttatttgcagcttat 156  Q
    |||||||||||||||||||||||||||||    
T  3887788 tttggataaacaacttatttgcagcttat 3887760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 290 - 362
Target Start/End: Complemental strand, 10233651 - 10233579
Alignment:
Q  290 tgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataag 362  Q
    ||||||||| |||||||||||||||  |||||  |||| | ||||| |||| |||| ||||||||| ||||||    
T  10233651 tgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 10233579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 336 - 368
Target Start/End: Original strand, 15515669 - 15515701
Alignment:
Q  336 ttatgccagtagataagctcaaataagttaatc 368  Q
    |||||||||||||||||||||||||||| ||||    
T  15515669 ttatgccagtagataagctcaaataagtcaatc 15515701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 335 - 375
Target Start/End: Original strand, 21002267 - 21002307
Alignment:
Q  335 cttatgccagtagataagctcaaataagttaatccaaacaa 375  Q
    ||||||| ||||||||||||||||||||  |||||||||||    
T  21002267 cttatgcaagtagataagctcaaataagccaatccaaacaa 21002307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 24502780 - 24502740
Alignment:
Q  335 cttatgccagtagataagctcaaataagttaatccaaacaa 375  Q
    |||||| |||||||||||||||| |||||| ||||||||||    
T  24502780 cttatgtcagtagataagctcaattaagttcatccaaacaa 24502740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 160
Target Start/End: Complemental strand, 24562500 - 24562468
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagca 160  Q
    |||||||||||| ||||||||||||||||||||    
T  24562500 tttggataaacagcttatttgcagcttatagca 24562468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 33186245 - 33186285
Alignment:
Q  202 ttaaattgtttttgtatatgctataagttgcttttataagc 242  Q
    ||||||| || ||||||||||||||||||| ||||||||||    
T  33186245 ttaaatttttcttgtatatgctataagttgtttttataagc 33186285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 160
Target Start/End: Complemental strand, 33541905 - 33541873
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagca 160  Q
    |||||||||||||||||||||||| ||||||||    
T  33541905 tttggataaacaacttatttgcagtttatagca 33541873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 156
Target Start/End: Original strand, 37473272 - 37473300
Alignment:
Q  128 tttggataaacaacttatttgcagcttat 156  Q
    |||||||||||||||||||||||||||||    
T  37473272 tttggataaacaacttatttgcagcttat 37473300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 172
Target Start/End: Complemental strand, 37617599 - 37617555
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagcagaagcacttatg 172  Q
    |||| |||||||| ||||||||||||||||||| |||| ||||||    
T  37617599 tttgtataaacaatttatttgcagcttatagcacaagcccttatg 37617555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 38116046 - 38116002
Alignment:
Q  324 gtctcaaaaaacttatgccagtagataagctcaaataagttaatc 368  Q
    |||||| |||||||| | |||||||||||||||||||||| ||||    
T  38116046 gtctcacaaaacttacgtcagtagataagctcaaataagtcaatc 38116002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 160
Target Start/End: Original strand, 38189658 - 38189690
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagca 160  Q
    |||||||||||||||||||||||| ||||||||    
T  38189658 tttggataaacaacttatttgcagtttatagca 38189690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 324 - 384
Target Start/End: Complemental strand, 41163019 - 41162959
Alignment:
Q  324 gtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaacaaaccttatgt 384  Q
    |||||||||||||||||||| |||||| | || ||||| | |||||||||| ||| |||||    
T  41163019 gtctcaaaaaacttatgccaatagatatgatccaataaatcaatccaaacagaccctatgt 41162959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 160
Target Start/End: Original strand, 41505560 - 41505592
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagca 160  Q
    |||||||||||| ||||||||||||||||||||    
T  41505560 tttggataaacagcttatttgcagcttatagca 41505592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 171
Target Start/End: Original strand, 48064191 - 48064235
Alignment:
Q  128 tttggataaacaactta-tttgcagcttatagcagaagcacttat 171  Q
    ||||||||||||||||| |||||||||||||||| |||| |||||    
T  48064191 tttggataaacaacttaatttgcagcttatagcataagcccttat 48064235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 160
Target Start/End: Original strand, 51190730 - 51190762
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagca 160  Q
    ||||||||||||||||||||| |||||||||||    
T  51190730 tttggataaacaacttatttgtagcttatagca 51190762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 6e-38; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 202 - 374
Target Start/End: Complemental strand, 16937974 - 16937802
Alignment:
Q  202 ttaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttg 301  Q
    |||||||||||||||||||||||||||||| ||||||| || |||| ||||| |||  |||||||||  ||||||| ||| || || |||||||||| ||    
T  16937974 ttaaattgtttttgtatatgctataagttgtttttatacgctatattggagaacttaggaaaataagctgaaaaaagcttatgaaatttgtcataagctg 16937875  T
Q  302 ttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||||||||||||  |||||   ||||| ||||||||||| ||||||||||||||||||||  ||||||||||    
T  16937874 ttttcataagttcttccaaacactctcacaaaacttatgctagtagataagctcaaataagccaatccaaaca 16937802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 210 - 375
Target Start/End: Complemental strand, 12857421 - 12857256
Alignment:
Q  210 tttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttgttttcata 309  Q
    |||||||| ||||||| || || |||||||||| |||| ||||| |||   ||||||||  ||||||| |||||| ||||||||||||||||||||||||    
T  12857421 tttttgtacatgctattagctgattttataagctatattggagaacttacaaaaataagctgaaaaaagcttgtgaaaattgtcataagttgttttcata 12857322  T
Q  310 agttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaacaa 375  Q
    |||||  |  ||| || ||| |||||||| | || |||||||||||||||||   |||||||||||    
T  12857321 agttctccggaaaagtttcacaaaacttacgtcaatagataagctcaaataaaccaatccaaacaa 12857256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 237 - 374
Target Start/End: Complemental strand, 7706054 - 7705917
Alignment:
Q  237 ataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaact 336  Q
    |||||| |||| ||||| |||| ||||||||| |||||||| |  ||| ||| ||||||||| |||||||||||||||  |||||  |  ||| ||||||    
T  7706054 ataagctatattggagaacttgtgaaaataagccgaaaaaagcaggtgaaaactgtcataagctgttttcataagttctcccaaagagcgtcacaaaact 7705955  T
Q  337 tatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||||| |||||||| |||||||||||| ||||||||||    
T  7705954 tatgctagtagatatgctcaaataagtcaatccaaaca 7705917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 202 - 337
Target Start/End: Complemental strand, 16458070 - 16457935
Alignment:
Q  202 ttaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttg 301  Q
    |||||||||||||||||||||||||||||| |||||| ||| | || ||||| |||| ||||||||   ||||| | ||| || ||| ||||||||| ||    
T  16458070 ttaaattgtttttgtatatgctataagttgtttttatgagctaaattggagaacttgtgaaaataaactgaaaagagcttatgaaaactgtcataagctg 16457971  T
Q  302 ttttcataagttcaaccaaaatgtctcaaaaaactt 337  Q
    |||||||||||||  |||||  |||||| |||||||    
T  16457970 ttttcataagttctcccaaacagtctcacaaaactt 16457935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 199 - 374
Target Start/End: Original strand, 10639929 - 10640104
Alignment:
Q  199 aaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataag 298  Q
    |||||||||||||||||||||||  || ||||| ||  |||| | || | ||||| |||  |||||||||    ||||| ||| || ||| |||||||||    
T  10639929 aaattaaattgtttttgtatatgtgatgagttgtttacataaactattttggagaacttatgaaaataagctagaaaaagcttatgaaaaatgtcataag 10640028  T
Q  299 ttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
     |||||||||||||||  |||||   | ||| |||||||||| |||||||||| |||||||||| |||||||||||    
T  10640029 ctgttttcataagttctcccaaacaatatcacaaaacttatgtcagtagataaactcaaataagctaatccaaaca 10640104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 202 - 361
Target Start/End: Original strand, 29925820 - 29925978
Alignment:
Q  202 ttaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttg 301  Q
    ||||||||||| ||||| |||||||||||| ||  |||||| |||| ||||| |||  |||||||||  ||||||| |   || | ||||||||||| ||    
T  29925820 ttaaattgtttctgtatgtgctataagttgtttacataagctatattggagaacttatgaaaataagttgaaaaaaacacatgaacattgtcataagctg 29925919  T
Q  302 ttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataa 361  Q
    |||||||||||||  |||||  |||||| ||||||| ||| ||||||||||| |||||||    
T  29925920 ttttcataagttctcccaaacggtctcacaaaactt-tgctagtagataagcccaaataa 29925978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 202 - 374
Target Start/End: Complemental strand, 34102405 - 34102232
Alignment:
Q  202 ttaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcga-aaaaatcttgtgcaaattgtcataagtt 300  Q
    |||| ||||||||||||||||||||||||| |||||||||| || | ||||| ||   ||||| ||| | | |||||  || || |||||||| |||| |    
T  34102405 ttaatttgtttttgtatatgctataagttgtttttataagccatgttggagaactcatgaaaacaagtcaataaaaaagttatgaaaattgtcttaagct 34102306  T
Q  301 gttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
     ||||||||| |||  |||||  || ||| ||||||||||||| ||| ||||||||||||||| | ||||||||    
T  34102305 attttcataaattcccccaaacagtgtcacaaaacttatgccaatagttaagctcaaataagtgattccaaaca 34102232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 233 - 375
Target Start/End: Complemental strand, 12857765 - 12857623
Alignment:
Q  233 ttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttgttttcataagttcaaccaaaatgtctcaaaa 332  Q
    |||||||||| |||| ||||| |||  |||||||||  |||||||  ||||| |||||||||||||||||||||||||||||  |  ||  || ||| ||    
T  12857765 ttttataagctatattggagaacttatgaaaataagctgaaaaaaggttgtgaaaattgtcataagttgttttcataagttctccggaacagtttcacaa 12857666  T
Q  333 aacttatgccagtagataagctcaaataagttaatccaaacaa 375  Q
    |||||| | || ||||| |||||||||||   |||||||||||    
T  12857665 aacttacgtcaatagatgagctcaaataaaccaatccaaacaa 12857623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 205 - 378
Target Start/End: Original strand, 32009674 - 32009848
Alignment:
Q  205 aattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatc-ttgtgcaaattgtcataagttgtt 303  Q
    ||||||| ||||||||||||||| ||| |||||||||| |||| ||||| |||  ||||| |||   |||||| | || || ||||||||| ||| ||||    
T  32009674 aattgttcttgtatatgctataaattgtttttataagctatattggagaacttatgaaaacaagttcaaaaaagctttatgaaaattgtcacaagctgtt 32009773  T
Q  304 ttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaacaaacc 378  Q
    ||||||||||   |||||  |||||| |||||||| | ||  |||||  |||||||| || ||||||||||||||    
T  32009774 ttcataagtttttccaaatagtctcacaaaacttaggtcaacagatagactcaaatatgtcaatccaaacaaacc 32009848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 290 - 374
Target Start/End: Original strand, 11700229 - 11700313
Alignment:
Q  290 tgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||||||||||||||| |||||||||    |||  |||||| ||||||||||||||| ||||||||||||||||  ||||||||||    
T  11700229 tgtcataagttgtttccataagttctgtgaaacagtctcacaaaacttatgccagtggataagctcaaataagcaaatccaaaca 11700313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 204 - 363
Target Start/End: Complemental strand, 29815176 - 29815025
Alignment:
Q  204 aaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttgtt 303  Q
    |||||||||||||||||||||||||||| || |||||    ||   |||| |||  |||||||||||| ||||  ||| || ||||||| ||||||||||    
T  29815176 aaattgtttttgtatatgctataagttgtttctataa----ta---gagaacttatgaaaataaggcggaaaag-cttttgaaaattgttataagttgtt 29815085  T
Q  304 ttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagt 363  Q
    ||| |||||||  | |||  |||||| ||||||||| | |||||||||||| ||||||||    
T  29815084 ttcgtaagttcttctaaatagtctcacaaaacttatacaagtagataagctaaaataagt 29815025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 374
Target Start/End: Original strand, 6521118 - 6521229
Alignment:
Q  264 ataaggcgaaaaaatcttgtgcaaattgtcataagtt-gttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataag 362  Q
    ||||| |||||||| |||||| ||||||||||||||  ||||||||||||||  |||||   ||||| ||||| |||| |||||| | ||||| ||||||    
T  6521118 ataagccgaaaaaagcttgtgaaaattgtcataagtccgttttcataagttctcccaaacaatctcacaaaacatatgtcagtagttcagctctaataag 6521217  T
Q  363 ttaatccaaaca 374  Q
    | ||||||||||    
T  6521218 tcaatccaaaca 6521229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 202 - 309
Target Start/End: Original strand, 12554498 - 12554604
Alignment:
Q  202 ttaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttg 301  Q
    |||||||||||||||||||||||||||||| |||||||| | |||| | | | | |  |||||| | || |||||||||| || |||||| |||||||||    
T  12554498 ttaaattgtttttgtatatgctataagttgtttttataacctatattgaaaaacctttgaaaatta-gccaaaaaatcttatgaaaattggcataagttg 12554596  T
Q  302 ttttcata 309  Q
    ||||||||    
T  12554597 ttttcata 12554604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 324 - 371
Target Start/End: Complemental strand, 22209793 - 22209746
Alignment:
Q  324 gtctcaaaaaacttatgccagtagataagctcaaataagttaatccaa 371  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||    
T  22209793 gtctcagaaaacttatgccagtagataagctcaaataagtcaatccaa 22209746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 171
Target Start/End: Original strand, 32372497 - 32372540
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagcagaagcacttat 171  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  32372497 tttggataaacaacttatttgcagcttatagcacaagcacttat 32372540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 271 - 373
Target Start/End: Original strand, 9107138 - 9107240
Alignment:
Q  271 gaaaaaatcttgtgcaaattgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatcca 370  Q
    |||||||  ||||| |||||||| |||| ||||||||| |||||  |||||   ||||| |||||||||| || ||||||| ||||||||||| ||||||    
T  9107138 gaaaaaagtttgtgaaaattgtcctaagctgttttcatgagttctcccaaacattctcacaaaacttatgtcactagataaactcaaataagtcaatcca 9107237  T
Q  371 aac 373  Q
    |||    
T  9107238 aac 9107240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 24030605 - 24030556
Alignment:
Q  122 agattatttggataaacaacttatttgcagcttatagcagaagcacttat 171  Q
    ||||| |||||||||||| |||||||||||||||||||| ||||||||||    
T  24030605 agattgtttggataaacagcttatttgcagcttatagcacaagcacttat 24030556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 290 - 374
Target Start/End: Original strand, 15246900 - 15246984
Alignment:
Q  290 tgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||||||||||| ||||||||||||  |||||   ||| | |||||||||| ||||||||||||||||||||   ||||||||||    
T  15246900 tgtcataagttgctttcataagttctcccaaacattctaataaaacttatgtcagtagataagctcaaataaacaaatccaaaca 15246984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 290 - 374
Target Start/End: Complemental strand, 34736530 - 34736446
Alignment:
Q  290 tgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||||| || ||| |||| ||||||  ||||| ||||||| |||||||||| ||  |||||||||||||||||| ||||||||||    
T  34736530 tgtcattagctgtgttcaaaagttctcccaaactgtctcacaaaacttatgtcaccagataagctcaaataagtcaatccaaaca 34736446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 202 - 373
Target Start/End: Original strand, 39105443 - 39105615
Alignment:
Q  202 ttaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttg 301  Q
    |||||||||||| ||||| |||||||  || ||| |||||| || | ||||| |||  |||||||||   |||| | ||| || | | ||||||||| ||    
T  39105443 ttaaattgttttcgtataagctataatctgttttcataagctatcttggagaacttatgaaaataagctaaaaatagcttatgaacaatgtcataagctg 39105542  T
Q  302 ttttcataagttcaaccaaaat-gtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaac 373  Q
    ||||||||| |||  ||||||  |||||| ||||||||| ||  ||||||| ||||||||||| |||||||||    
T  39105543 ttttcataaattctcccaaaaaagtctcataaaacttatacccctagataaactcaaataagtcaatccaaac 39105615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 210 - 374
Target Start/End: Original strand, 43300865 - 43301029
Alignment:
Q  210 tttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttgttttcata 309  Q
    ||||||||||| |||||||||| |||| ||||| || | ||||| |||  |||||||||  |||| |  ||| |  ||| ||||||| | |||||| |||    
T  43300865 tttttgtatatcctataagttgtttttgtaagctatcttggagaacttatgaaaataagctgaaacatgcttatataaaatgtcataggctgtttttata 43300964  T
Q  310 agttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    | |||  || ||  |||||| ||||||||||||| || |||||||||||||||  ||||||||||    
T  43300965 acttctccccaacagtctcataaaacttatgccattatataagctcaaataagccaatccaaaca 43301029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 128 - 171
Target Start/End: Original strand, 28776858 - 28776901
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagcagaagcacttat 171  Q
    ||||||||||||||||||||||||||||||||  ||||||||||    
T  28776858 tttggataaacaacttatttgcagcttatagcctaagcacttat 28776901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 128 - 171
Target Start/End: Original strand, 40426635 - 40426678
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagcagaagcacttat 171  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||    
T  40426635 tttggataaacaactcatttgcagcttatagcacaagcacttat 40426678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 290 - 377
Target Start/End: Original strand, 41419386 - 41419473
Alignment:
Q  290 tgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaacaaac 377  Q
    ||||||||| |||||||| |||||   |||||   ||||| |||| ||||| |||||||| ||||||||||||| |||||||||||||    
T  41419386 tgtcataagctgttttcacaagttatcccaaacaatctcacaaaatttatgtcagtagattagctcaaataagtcaatccaaacaaac 41419473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 290 - 372
Target Start/End: Original strand, 6096614 - 6096696
Alignment:
Q  290 tgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaa 372  Q
    ||||| ||| ||||| | |||||||  || ||| |||||| |||||||||||||||||||||| ||||||| || ||||||||    
T  6096614 tgtcacaagctgtttacgtaagttcttcctaaaagtctcacaaaacttatgccagtagataagttcaaatacgtcaatccaaa 6096696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 363
Target Start/End: Original strand, 12425544 - 12425713
Alignment:
Q  196 ataaaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcat 295  Q
    ||||| |||||||||||| ||||| |||||||| || ||| | |||| || | ||||| |||  |||||||||  ||||| | ||| |  | | |||  |    
T  12425544 ataaagttaaattgttttcgtataagctataagctgttttcacaagctatcttggagaacttatgaaaataagttgaaaacaacttattgacaatgtttt 12425643  T
Q  296 aagttgttttcata--agttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagt 363  Q
    | ||||||||||||  |||||  |||||  |||||| |||||||||| ||||||||||||||||||||||    
T  12425644 aggttgttttcatataagttctcccaaacagtctcacaaaacttatgacagtagataagctcaaataagt 12425713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 377
Target Start/End: Original strand, 41534506 - 41534592
Alignment:
Q  291 gtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaacaaac 377  Q
    |||||||| |||||||| |||||   |||||   ||||| |||| ||||| |||||||| ||||||||||||| |||||||||||||    
T  41534506 gtcataagctgttttcacaagttatcccaaacaatctcacaaaatttatgtcagtagattagctcaaataagtcaatccaaacaaac 41534592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 3520304 - 3520345
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagcagaagcactt 169  Q
    |||||||||||||||||||| |||||||||||| ||||||||    
T  3520304 tttggataaacaacttattttcagcttatagcacaagcactt 3520345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 362
Target Start/End: Original strand, 15015922 - 15015982
Alignment:
Q  302 ttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataag 362  Q
    |||||||||||||  |||||  |||||| ||| |||||| |||||||||||||||||||||    
T  15015922 ttttcataagttctcccaaacagtctcacaaagcttatgtcagtagataagctcaaataag 15015982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 374
Target Start/End: Complemental strand, 35445843 - 35445763
Alignment:
Q  294 ataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||||| ||||||||||| |||   ||||  |||||| |||||||||| |||||||||| |||||||||| | |||||||||    
T  35445843 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataagatgatccaaaca 35445763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 39594915 - 39594959
Alignment:
Q  331 aaaacttatgccagtagataagctcaaataagttaatccaaacaa 375  Q
    |||||||||| | |||||||||||||||||||| |||||||||||    
T  39594915 aaaacttatgtcggtagataagctcaaataagtcaatccaaacaa 39594959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 290 - 362
Target Start/End: Original strand, 41535448 - 41535520
Alignment:
Q  290 tgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataag 362  Q
    |||||||||||||||||||||||||  ||||| ||| ||| |||||| ||   |||||||||||| |||||||    
T  41535448 tgtcataagttgttttcataagttctcccaaactgtttcacaaaactgatataagtagataagcttaaataag 41535520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 362
Target Start/End: Original strand, 3520645 - 3520716
Alignment:
Q  291 gtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataag 362  Q
    |||||||| |||||||||||||||  |||||  |||||| | ||||||| | ||||||| ||||||||||||    
T  3520645 gtcataagatgttttcataagttctcccaaacagtctcacacaacttatactagtagatgagctcaaataag 3520716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 370
Target Start/End: Complemental strand, 9202710 - 9202671
Alignment:
Q  331 aaaacttatgccagtagataagctcaaataagttaatcca 370  Q
    |||||||||||||| |||||||||||||||||| ||||||    
T  9202710 aaaacttatgccaggagataagctcaaataagtcaatcca 9202671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 13697956 - 13697913
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagcagaagcacttat 171  Q
    |||||||||||||||||||||||||||||| || ||||| ||||    
T  13697956 tttggataaacaacttatttgcagcttataacataagcatttat 13697913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 374
Target Start/End: Original strand, 14331478 - 14331517
Alignment:
Q  335 cttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||||| |||||||||||||||||||||| ||||||||||    
T  14331478 cttatgacagtagataagctcaaataagtcaatccaaaca 14331517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 231
Target Start/End: Original strand, 31051866 - 31051901
Alignment:
Q  196 ataaaattaaattgtttttgtatatgctataagttg 231  Q
    |||||||||||||||||| |||||||||||||||||    
T  31051866 ataaaattaaattgttttggtatatgctataagttg 31051901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 374
Target Start/End: Original strand, 32941546 - 32941621
Alignment:
Q  300 tgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagat-aagctcaaataagttaatccaaaca 374  Q
    |||||||||||||||  |||||  |||||| | |||||||| |||||||| |||||| ||||||| ||||||||||    
T  32941546 tgttttcataagttctcccaaacggtctcacagaacttatgtcagtagataaagctctaataagtcaatccaaaca 32941621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 372
Target Start/End: Original strand, 7674714 - 7674796
Alignment:
Q  290 tgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaa 372  Q
    ||||||||||||||| |||||||||  ||||   |||||| |||||||| |   |||||||||||||||||||  ||||||||    
T  7674714 tgtcataagttgtttccataagttcttccaagcagtctcacaaaacttaagtaggtagataagctcaaataagccaatccaaa 7674796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 377
Target Start/End: Original strand, 14980621 - 14980663
Alignment:
Q  335 cttatgccagtagataagctcaaataagttaatccaaacaaac 377  Q
    ||||||||||||||||||||||||||||| | |||||| ||||    
T  14980621 cttatgccagtagataagctcaaataagtcattccaaataaac 14980663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 374
Target Start/End: Original strand, 32010022 - 32010096
Alignment:
Q  300 tgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||||||||||||||   ||||  |||| || |||||||||  ||||||||| ||||||||||| ||||||||||    
T  32010022 tgttttcataagttctctcaaacagtctgaagaaacttatgtgagtagataaactcaaataagtcaatccaaaca 32010096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 170
Target Start/End: Complemental strand, 34736713 - 34736671
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagcagaagcactta 170  Q
    |||||||||||||||||| |||||||||||||| || ||||||    
T  34736713 tttggataaacaacttatctgcagcttatagcacaaacactta 34736671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 374
Target Start/End: Complemental strand, 6715903 - 6715870
Alignment:
Q  341 ccagtagataagctcaaataagttaatccaaaca 374  Q
    ||||||||||||||| ||||||||||||||||||    
T  6715903 ccagtagataagctcgaataagttaatccaaaca 6715870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 372
Target Start/End: Complemental strand, 10771846 - 10771809
Alignment:
Q  335 cttatgccagtagataagctcaaataagttaatccaaa 372  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  10771846 cttatgccagtagataagctcaaataagccaatccaaa 10771809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 374
Target Start/End: Original strand, 11353050 - 11353091
Alignment:
Q  333 aacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||||||||||| || |||||||||||||||| ||||||||||    
T  11353050 aacttatgccactatataagctcaaataagtgaatccaaaca 11353091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 374
Target Start/End: Complemental strand, 11374344 - 11374303
Alignment:
Q  333 aacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||||||||||| || |||||||||||||||| ||||||||||    
T  11374344 aacttatgccactatataagctcaaataagtgaatccaaaca 11374303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 157
Target Start/End: Complemental strand, 12433567 - 12433538
Alignment:
Q  128 tttggataaacaacttatttgcagcttata 157  Q
    ||||||||||||||||||||||||||||||    
T  12433567 tttggataaacaacttatttgcagcttata 12433538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 360
Target Start/End: Complemental strand, 17560413 - 17560380
Alignment:
Q  327 tcaaaaaacttatgccagtagataagctcaaata 360  Q
    |||||||||||||||||||| |||||||||||||    
T  17560413 tcaaaaaacttatgccagtaaataagctcaaata 17560380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 362
Target Start/End: Original strand, 32372686 - 32372751
Alignment:
Q  297 agttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataag 362  Q
    ||||||||| | ||||||  |||||  |||||| ||||||||||||||||||||||  ||||||||    
T  32372686 agttgttttaaaaagttcttccaaacagtctcacaaaacttatgccagtagataaggccaaataag 32372751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 160
Target Start/End: Complemental strand, 3735688 - 3735656
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagca 160  Q
    |||||||||||||| ||||||||||||||||||    
T  3735688 tttggataaacaacctatttgcagcttatagca 3735656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 196 - 268
Target Start/End: Complemental strand, 6587204 - 6587132
Alignment:
Q  196 ataaaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataag 268  Q
    ||||| || ||||||||| ||||| ||||||||||| ||| |||||| |||  ||||| |||| |||||||||    
T  6587204 ataaacttcaattgttttcgtataagctataagttgttttcataagctatagtggagaacttgtgaaaataag 6587132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 335 - 375
Target Start/End: Original strand, 8820872 - 8820912
Alignment:
Q  335 cttatgccagtagataagctcaaataagttaatccaaacaa 375  Q
    ||||||| |||||||||| |||||||||| |||||||||||    
T  8820872 cttatgctagtagataagatcaaataagtaaatccaaacaa 8820912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 160
Target Start/End: Complemental strand, 9202935 - 9202903
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagca 160  Q
    |||||||||||| ||||||||||||||||||||    
T  9202935 tttggataaacatcttatttgcagcttatagca 9202903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 160
Target Start/End: Original strand, 12554336 - 12554368
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagca 160  Q
    |||||||||||||||||||||||||||| ||||    
T  12554336 tttggataaacaacttatttgcagcttaaagca 12554368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 342 - 374
Target Start/End: Original strand, 14932415 - 14932447
Alignment:
Q  342 cagtagataagctcaaataagttaatccaaaca 374  Q
    |||||||||||||||||||||| ||||||||||    
T  14932415 cagtagataagctcaaataagtcaatccaaaca 14932447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 21583684 - 21583644
Alignment:
Q  129 ttggataaacaacttatttgcagcttatagcagaagcactt 169  Q
    |||||||||||||||||| | |||||||||||||| |||||    
T  21583684 ttggataaacaacttattagtagcttatagcagaaacactt 21583644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 332 - 380
Target Start/End: Complemental strand, 26005159 - 26005111
Alignment:
Q  332 aaacttatgccagtagataagctcaaataagttaatccaaacaaacctt 380  Q
    ||||||||| || | |||||||| |||||||||||||||||||| ||||    
T  26005159 aaacttatggcactggataagcttaaataagttaatccaaacaagcctt 26005111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 135 - 171
Target Start/End: Complemental strand, 32703628 - 32703592
Alignment:
Q  135 aaacaacttatttgcagcttatagcagaagcacttat 171  Q
    |||||||||||||||||||||||||| ||||| ||||    
T  32703628 aaacaacttatttgcagcttatagcacaagcatttat 32703592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 335 - 375
Target Start/End: Original strand, 35960524 - 35960564
Alignment:
Q  335 cttatgccagtagataagctcaaataagttaatccaaacaa 375  Q
    ||||||||| | |||||||||||||||||||| ||||||||    
T  35960524 cttatgccaattgataagctcaaataagttaacccaaacaa 35960564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 6e-32; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 205 - 359
Target Start/End: Original strand, 34744010 - 34744164
Alignment:
Q  205 aattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttgttt 304  Q
    ||||||||||||||||| ||||||||| ||| |||||| |||| ||||| |||   ||||||||||||||||| |||||| ||||||||||||||| |||    
T  34744010 aattgtttttgtatatggtataagttgttttcataagctatattggagaacttataaaaataaggcgaaaaaagcttgtgaaaattgtcataagttcttt 34744109  T
Q  305 tcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaat 359  Q
    |||| |||||  |||||  |||||| ||| ||||||  |||||||||||||||||    
T  34744110 tcattagttcttccaaacagtctcacaaatcttatgttagtagataagctcaaat 34744164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 202 - 374
Target Start/End: Complemental strand, 19302650 - 19302482
Alignment:
Q  202 ttaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttg 301  Q
    |||||||||||||||||||| ||||||||| |||||||||| |||    ||| |||  |||||||||  |||||||  || || ||||||||||||| ||    
T  19302650 ttaaattgtttttgtatatgttataagttgtttttataagctata----agaacttatgaaaataagttgaaaaaagtttatgaaaattgtcataagctg 19302555  T
Q  302 ttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||||||||| |||  |||||   ||||| |||||||||| |||||||||||||||||||||| ||| ||||||    
T  19302554 ttttcataaattctcccaaatattctcacaaaacttatgtcagtagataagctcaaataagtcaattcaaaca 19302482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 202 - 354
Target Start/End: Complemental strand, 19022676 - 19022524
Alignment:
Q  202 ttaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttg 301  Q
    ||||||||||||  || ||||||||||||| |||||||||| |||| ||||| |||  |||||||||  ||| | | ||| || ||||||||||||||||    
T  19022676 ttaaattgttttaataaatgctataagttgtttttataagctatattggagaacttatgaaaataagttgaagacaacttatgaaaattgtcataagttg 19022577  T
Q  302 ttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagct 354  Q
    ||||||||| |||  |||||   ||||| |||||| ||| |||||||||||||    
T  19022576 ttttcataaattctcccaaacaatctcacaaaactcatgtcagtagataagct 19022524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 212 - 378
Target Start/End: Complemental strand, 11619239 - 11619073
Alignment:
Q  212 tttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttgttttcataag 311  Q
    |||| ||||||||| | ||| |||||||||| |  | ||||| |||  |||| ||||  ||||||| ||| || |||||||||||||||||||||||||     
T  11619239 tttgaatatgctatcaattgtttttataagctacgttggagaacttatgaaattaagttgaaaaaagcttatgaaaattgtcataagttgttttcataaa 11619140  T
Q  312 ttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaacaaacc 378  Q
    |||  ||||  ||| |||  || |||||| |||||||||||||||||||||  ||||||||||||||    
T  11619139 ttctcccaatctgtttcatgaagcttatgtcagtagataagctcaaataagccaatccaaacaaacc 11619073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 205 - 358
Target Start/End: Original strand, 420342 - 420495
Alignment:
Q  205 aattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttgttt 304  Q
    ||||||||||||||||||||||||||| ||   ||||| |||| ||||| |||  |||||||||  ||||||  |||  | ||| |||||||| ||||||    
T  420342 aattgtttttgtatatgctataagttgtttccgtaagctatattggagaacttatgaaaataagttgaaaaaggctttagaaaactgtcataaattgttt 420441  T
Q  305 tcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaa 358  Q
    ||||||||||  |||||  |||||| ||| |||| ||||||||| |||||||||    
T  420442 tcataagttctcccaaacagtctcacaaagcttaagccagtagacaagctcaaa 420495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 196 - 361
Target Start/End: Complemental strand, 33601506 - 33601342
Alignment:
Q  196 ataaaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcat 295  Q
    ||||| ||||||| ||||||||| |||||||||||| |||||||||| || |  |||| |||  |||  ||||  ||||||| ||| || ||| ||||||    
T  33601506 ataaagttaaattatttttgtatttgctataagttg-ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcat 33601408  T
Q  296 aagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataa 361  Q
    ||| |||||||||||||||    |||  |||||| ||||||||||||| |||||||||||||||||    
T  33601407 aagctgttttcataagttctcgaaaagagtctcacaaaacttatgccaatagataagctcaaataa 33601342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 197 - 362
Target Start/End: Original strand, 33678754 - 33678919
Alignment:
Q  197 taaaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcata 296  Q
    |||| |||||| ||||||||| | |||||||| || ||| |||||| || | ||| | |||| |||||||||  ||||| ||||  || | | ||| |||    
T  33678754 taaagttaaatggtttttgtaaaagctataagctgttttcataagctatcttggaaaacttgtgaaaataagttgaaaacatctcatgaacaatgttata 33678853  T
Q  297 agttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataag 362  Q
    ||||||||||||||||||  ||||| ||||||| ||||||||||| |||||||||| | |||||||    
T  33678854 agttgttttcataagttctcccaaattgtctcacaaaacttatgcaagtagataagtttaaataag 33678919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 196 - 374
Target Start/End: Complemental strand, 4970890 - 4970711
Alignment:
Q  196 ataaaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgt-gcaaattgtca 294  Q
    ||||||| |||||||||||||||||||||||||||  |||||||||  ||||  |||| |||  ||||||||   |||    | || | | |||||| ||    
T  4970890 ataaaataaaattgtttttgtatatgctataagttctttttataagatatattagagaacttatgaaaataaactgaatttttttttttgaaaattgcca 4970791  T
Q  295 taagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||||||||||||||||||||  |||||  |||||| || ||||||| ||  |||||||||||||||||| ||||||||||    
T  4970790 taagttgttttcataagttctcccaaacagtctcacaagacttatgtcacgagataagctcaaataagtcaatccaaaca 4970711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 203 - 362
Target Start/End: Complemental strand, 27863815 - 27863656
Alignment:
Q  203 taaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttgt 302  Q
    |||||| | |||||||||||||||||||| ||| |||| | ||||  |||| |||  ||| |||||  |||||||  || || ||||| ||  ||| |||    
T  27863815 taaattttatttgtatatgctataagttgttttaataaactatattagagaacttatgaacataagctgaaaaaagtttttgaaaattttctcaagctgt 27863716  T
Q  303 tttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataag 362  Q
    ||||||||||||   ||||  |||||| ||||||||||||||| ||||||||||||||||    
T  27863715 tttcataagttctctcaaatagtctcacaaaacttatgccagtggataagctcaaataag 27863656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 201 - 357
Target Start/End: Complemental strand, 33602118 - 33601963
Alignment:
Q  201 attaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagtt 300  Q
    |||||||||||||||||| |||||||||| | |||||||||| || |  |||| |||  |||  ||||  ||||||  ||| || ||| ||||||||| |    
T  33602118 attaaattgtttttgtatttgctataagtgg-ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagct 33602020  T
Q  301 gttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaa 357  Q
    |||||||||||||     |||  |||||| |||||||||||||||||||||||||||    
T  33602019 gttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 33601963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 196 - 268
Target Start/End: Complemental strand, 43694667 - 43694595
Alignment:
Q  196 ataaaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataag 268  Q
    ||||| ||||||||||||||||||||||||||| || |||||||||| |||||| ||| |||  |||||||||    
T  43694667 ataaatttaaattgtttttgtatatgctataagctgtttttataagctatatcgaagaacttatgaaaataag 43694595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 261 - 374
Target Start/End: Complemental strand, 33266516 - 33266405
Alignment:
Q  261 aaaataaggcgaaaaaatcttgtgcaaattgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaata 360  Q
    ||||||||  ||||||| ||| ||| |||||||||  ||||||||| ||| |||  |||||  || ||| |||||||||| | |||||||||||||||||    
T  33266516 aaaataagctgaaaaaaacttttgcgaattgtcat--gttgttttcgtaaattctcccaaatagtttcacaaaacttatgtcggtagataagctcaaata 33266419  T
Q  361 agttaatccaaaca 374  Q
    ||| ||||||||||    
T  33266418 agtcaatccaaaca 33266405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 196 - 266
Target Start/End: Complemental strand, 46280369 - 46280299
Alignment:
Q  196 ataaaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaata 266  Q
    ||||| ||||||||||||||||||||||||||| || |||||||||| |||| ||||| |||  |||||||    
T  46280369 ataaatttaaattgtttttgtatatgctataagctgtttttataagctatattggagaacttatgaaaata 46280299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 208 - 373
Target Start/End: Original strand, 49019853 - 49020019
Alignment:
Q  208 tgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataag-ttgttttc 306  Q
    ||||||||||||||||||||| |  |||||||||  |||| | ||| |||  ||||||||  ||||||||  ||||| ||||| ||||||| || ||| |    
T  49019853 tgtttttgtatatgctataagctatttttataagttatattgtagaacttatgaaaataaaccgaaaaaagattgtgaaaattttcataagcttttttcc 49019952  T
Q  307 ataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaac 373  Q
    | ||||||  |||||  |||||| ||||| |||| ||| |||||||||  ||||||| |||||||||    
T  49019953 acaagttctcccaaacagtctcacaaaacatatgtcagcagataagctacaataagtcaatccaaac 49020019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 272 - 373
Target Start/End: Complemental strand, 34464242 - 34464141
Alignment:
Q  272 aaaaaatcttgtgcaaattgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaa 371  Q
    |||||| |||||| ||||||||||||| ||||||||||||| |  |||||| ||||   |||| ||||| || ||||||| ||||||||| | |||||||    
T  34464242 aaaaaagcttgtgaaaattgtcataagctgttttcataagtcctcccaaaaagtcttgtaaaatttatgtcaatagataaactcaaataaatcaatccaa 34464143  T
Q  372 ac 373  Q
    ||    
T  34464142 ac 34464141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 375
Target Start/End: Original strand, 1418531 - 1418571
Alignment:
Q  335 cttatgccagtagataagctcaaataagttaatccaaacaa 375  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  1418531 cttatgccagtagataagctcaaataagtcaatccaaacaa 1418571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 290 - 374
Target Start/End: Original strand, 5947308 - 5947392
Alignment:
Q  290 tgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||||||||| || ||||| ||||||  |||||  |||||| ||||||||| ||| ||||||||||||||||||  ||||||||||    
T  5947308 tgtcataagctggtttcaaaagttcttccaaacagtctcataaaacttataccaatagataagctcaaataagccaatccaaaca 5947392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 290 - 374
Target Start/End: Original strand, 34035984 - 34036068
Alignment:
Q  290 tgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||||||||||| |||||||||||||  ||||   |||||| || || |||| |||||||||||||||||||||| ||| ||||||    
T  34035984 tgtcataagttattttcataagttcttccaagtagtctcacaatacatatgtcagtagataagctcaaataagtcaattcaaaca 34036068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 202 - 362
Target Start/End: Original strand, 48470023 - 48470183
Alignment:
Q  202 ttaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttg 301  Q
    |||||||||||||||||||  ||||||||| ||| |||||| || | | | | |||  ||| |||||   |||||| ||| || ||| || |||||| ||    
T  48470023 ttaaattgtttttgtatataatataagttgttttcataagctattttgaataacttatgaacataagctcaaaaaagcttatgaaaaatgccataagctg 48470122  T
Q  302 ttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataag 362  Q
    |||||||||||||  |||||   ||||| |||||||||| |  ||||||||||||||||||    
T  48470123 ttttcataagttctcccaaacaatctcataaaacttatgtctatagataagctcaaataag 48470183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 336 - 375
Target Start/End: Complemental strand, 17988990 - 17988951
Alignment:
Q  336 ttatgccagtagataagctcaaataagttaatccaaacaa 375  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  17988990 ttatgcgagtagataagctcaaataagttaatccaaacaa 17988951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 378
Target Start/End: Original strand, 4966276 - 4966314
Alignment:
Q  340 gccagtagataagctcaaataagttaatccaaacaaacc 378  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  4966276 gccagtagataagctcaaataatttaatccaaacaaacc 4966314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 374
Target Start/End: Complemental strand, 17944440 - 17944262
Alignment:
Q  196 ataaaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcat 295  Q
    ||||| |||||||||||||||||||| | ||||||| ||| |||||  || | ||| |  ||  |||| ||||  ||||||| | | || ||| ||||||    
T  17944440 ataaagttaaattgtttttgtatatgttgtaagttgttttcataagttatcttggataatttatgaaattaagctgaaaaaagcatatgaaaagtgtcat 17944341  T
Q  296 aagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||| |||||| |||||||     |||  |||||| ||| |||||||||||||||||||| |||||||| | ||||||||    
T  17944340 aagctgtttttataagttgtctgaaacagtctcacaaagcttatgccagtagataagcttaaataagtcactccaaaca 17944262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 314
Target Start/End: Complemental strand, 30571028 - 30570910
Alignment:
Q  196 ataaaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcat 295  Q
    ||||| ||||||| ||||||||||||||||||| |  |||||||| | | || ||||| |||  |||| |||   ||||||| ||| || ||||||||||    
T  30571028 ataaagttaaattatttttgtatatgctataagctatttttataacctacattggagaacttatgaaattaacatgaaaaaagcttatgaaaattgtcat 30570929  T
Q  296 aagttgttttcataagttc 314  Q
    ||| |||||||| ||||||    
T  30570928 aagctgttttcacaagttc 30570910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 374
Target Start/End: Original strand, 36517654 - 36517728
Alignment:
Q  300 tgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||||| ||||||||  |||||  |||| | ||||||||||||||||| ||||||||||||| | ||||||||||    
T  36517654 tgttttaataagttctcccaaacagtcttagaaaacttatgccagtagctaagctcaaataaatgaatccaaaca 36517728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 126 - 171
Target Start/End: Original strand, 28900758 - 28900803
Alignment:
Q  126 tatttggataaacaacttatttgcagcttatagcagaagcacttat 171  Q
    |||||||||||||||||||||||||||||||| || ||||| ||||    
T  28900758 tatttggataaacaacttatttgcagcttataacacaagcatttat 28900803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 33553007 - 33552966
Alignment:
Q  129 ttggataaacaacttatttgcagcttatagcagaagcactta 170  Q
    |||||||||||||||||||||||||||| ||| |||||||||    
T  33553007 ttggataaacaacttatttgcagcttattgcacaagcactta 33552966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 372
Target Start/End: Original strand, 9210922 - 9210970
Alignment:
Q  324 gtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaa 372  Q
    |||||| |||||||||  |||||||||||||||||||||| ||||||||    
T  9210922 gtctcagaaaacttatatcagtagataagctcaaataagtcaatccaaa 9210970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 160
Target Start/End: Complemental strand, 18865247 - 18865215
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagca 160  Q
    |||||||||||||||||||||||||||||||||    
T  18865247 tttggataaacaacttatttgcagcttatagca 18865215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 136 - 172
Target Start/End: Original strand, 39907710 - 39907746
Alignment:
Q  136 aacaacttatttgcagcttatagcagaagcacttatg 172  Q
    ||||||||||||||||||||||||| |||||||||||    
T  39907710 aacaacttatttgcagcttatagcataagcacttatg 39907746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 196 - 304
Target Start/End: Original strand, 45264068 - 45264176
Alignment:
Q  196 ataaaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcat 295  Q
    ||||| ||||||||||||||||||||||||||| |  |||||| |   ||||| |||| |||  ||||||||| |||||||| || ||| |  |||||||    
T  45264068 ataaagttaaattgtttttgtatatgctataagctatttttatgatatatatcagagaacttaggaaaataagccgaaaaaaactcgtgaactttgtcat 45264167  T
Q  296 aagttgttt 304  Q
    ||| |||||    
T  45264168 aagctgttt 45264176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 47177519 - 47177563
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagcagaagcacttatg 172  Q
    |||||||||||||||||||||| | |||||||| |||||||||||    
T  47177519 tttggataaacaacttatttgctgattatagcataagcacttatg 47177563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 336 - 371
Target Start/End: Original strand, 529475 - 529510
Alignment:
Q  336 ttatgccagtagataagctcaaataagttaatccaa 371  Q
    |||||||||||||||||||||||||||| |||||||    
T  529475 ttatgccagtagataagctcaaataagtcaatccaa 529510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 11619383 - 11619340
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagcagaagcacttat 171  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||    
T  11619383 tttggataaacaacttatttgcagattattgcacaagcacttat 11619340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 375
Target Start/End: Complemental strand, 22283615 - 22283564
Alignment:
Q  324 gtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaacaa 375  Q
    |||||| |||| ||||| ||||||||||| |||||||||| |||||||||||    
T  22283615 gtctcacaaaatttatgacagtagataagttcaaataagtcaatccaaacaa 22283564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 297
Target Start/End: Complemental strand, 38138566 - 38138475
Alignment:
Q  206 attgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataa 297  Q
    |||| ||||||||||||||||||||| |||||| ||| |||| |  || |||  |||||||||  ||||||| ||| || ||||||||||||    
T  38138566 attgattttgtatatgctataagttgtttttattagctatattgacgaacttatgaaaataagttgaaaaaagcttatgaaaattgtcataa 38138475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 202 - 372
Target Start/End: Original strand, 45338428 - 45338602
Alignment:
Q  202 ttaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagtt- 300  Q
    |||||||||||||||||||||| ||||||| |||| ||||| |||| ||||| ||   |||||||||  ||||||| ||  |  |||||||||||||||     
T  45338428 ttaaattgtttttgtatatgctgtaagttg-ttttttaagctatattggagaactgatgaaaataagttgaaaaaaactaataaaaattgtcataagtta 45338526  T
Q  301 ----gttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaa 372  Q
        |     ||||||||  |||||  |||||||||||||||||| ||| ||||| ||||||||||  ||||||||    
T  45338527 agcagaaagaataagttctcccaaacagtctcaaaaaacttatgctagtggataaactcaaataagccaatccaaa 45338602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 171
Target Start/End: Original strand, 46139825 - 46139868
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagcagaagcacttat 171  Q
    ||||| |||||||||||||||||||||||| || ||||||||||    
T  46139825 tttggttaaacaacttatttgcagcttataacacaagcacttat 46139868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 3928043 - 3927941
Alignment:
Q  260 gaaaataaggcgaaaaaatcttgtgcaaattgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaat 359  Q
    |||||||||  ||||||| ||| || |||||||||||| ||||||| | || |||   ||||  |||||| ||||||||||| ||||||||  |||||||    
T  3928043 gaaaataagttgaaaaaagcttatgaaaattgtcataaattgttttaaaaaattctctcaaatagtctcacaaaacttatgctagtagatagcctcaaat 3927944  T
Q  360 aag 362  Q
    |||    
T  3927943 aag 3927941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 373
Target Start/End: Original strand, 7513671 - 7513709
Alignment:
Q  335 cttatgccagtagataagctcaaataagttaatccaaac 373  Q
    ||||||||||||||||||||||||||||| ||| |||||    
T  7513671 cttatgccagtagataagctcaaataagtcaattcaaac 7513709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 378
Target Start/End: Original strand, 20526523 - 20526601
Alignment:
Q  300 tgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaacaaacc 378  Q
    |||||||||||||||   ||||  |||||| |||| || | ||| ||||||| ||||||||||| ||||||||||||||    
T  20526523 tgttttcataagttctctcaaacagtctcacaaaatttctaccaatagataaactcaaataagtcaatccaaacaaacc 20526601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 166
Target Start/End: Complemental strand, 22296398 - 22296364
Alignment:
Q  132 gataaacaacttatttgcagcttatagcagaagca 166  Q
    ||||||||||||||||||||||||||||| |||||    
T  22296398 gataaacaacttatttgcagcttatagcacaagca 22296364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 33266667 - 33266621
Alignment:
Q  126 tatttggataaacaacttatttgcagcttatagcagaagcacttatg 172  Q
    |||||||||||||| | |||||||||||||||| | |||||||||||    
T  33266667 tatttggataaacatcatatttgcagcttatagtacaagcacttatg 33266621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 374
Target Start/End: Complemental strand, 34083569 - 34083527
Alignment:
Q  332 aaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||||||||| ||||||| ||||||||||||| ||||||||||    
T  34083569 aaacttatgcaagtagatgagctcaaataagtcaatccaaaca 34083527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 241
Target Start/End: Original strand, 119883 - 119928
Alignment:
Q  196 ataaaattaaattgtttttgtatatgctataagttgcttttataag 241  Q
    ||||| ||||||||||| |||| ||||||||||||| |||||||||    
T  119883 ataaagttaaattgtttgtgtaaatgctataagttgtttttataag 119928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 360
Target Start/End: Original strand, 14768194 - 14768227
Alignment:
Q  327 tcaaaaaacttatgccagtagataagctcaaata 360  Q
    |||||||||||||||||||| |||||||||||||    
T  14768194 tcaaaaaacttatgccagtaaataagctcaaata 14768227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 362
Target Start/End: Original strand, 20234554 - 20234599
Alignment:
Q  317 ccaaaatgtctcaaaaaacttatgccagtagataagctcaaataag 362  Q
    |||||| |||||| ||||||||||| |||| |||||||||||||||    
T  20234554 ccaaaaagtctcacaaaacttatgcaagtatataagctcaaataag 20234599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 374
Target Start/End: Original strand, 30134246 - 30134283
Alignment:
Q  337 tatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||| |||||||||||||||||||||||||| ||||||    
T  30134246 tatgtcagtagataagctcaaataagttaattcaaaca 30134283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 374
Target Start/End: Original strand, 44822060 - 44822109
Alignment:
Q  325 tctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||||| |||||||||| ||| |||||| ||||||||||| ||||||||||    
T  44822060 tctcacaaaacttatgtcagcagataaactcaaataagtcaatccaaaca 44822109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 314
Target Start/End: Complemental strand, 45790521 - 45790405
Alignment:
Q  197 taaaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcata 296  Q
    |||| |||| |||||| | |||| ||||||||||| |||||||| | |||| ||| | |||  |||||||||  ||||||  ||| |  |||||||||||    
T  45790521 taaagttaatttgtttatttataagctataagttgtttttataaactatattggataacttatgaaaataagctgaaaaag-cttttaaaaattgtcata 45790423  T
Q  297 agttgttttcataagttc 314  Q
    |||| |||||||||||||    
T  45790422 agttattttcataagttc 45790405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 753166 - 753126
Alignment:
Q  335 cttatgccagtagataagctcaaataagttaatccaaacaa 375  Q
    ||||||||| || |||||||||||||||| |||||||||||    
T  753166 cttatgccaatacataagctcaaataagtaaatccaaacaa 753126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 342 - 378
Target Start/End: Complemental strand, 11782994 - 11782958
Alignment:
Q  342 cagtagataagctcaaataagttaatccaaacaaacc 378  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  11782994 cagtagataatctcaaataagtcaatccaaacaaacc 11782958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 361
Target Start/End: Original strand, 18765366 - 18765422
Alignment:
Q  305 tcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataa 361  Q
    ||||||||||  |||||  |||||| |||||||||| || |||||||||||||||||    
T  18765366 tcataagttctcccaaacagtctcacaaaacttatgtcaatagataagctcaaataa 18765422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 225 - 361
Target Start/End: Original strand, 21196271 - 21196406
Alignment:
Q  225 taagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttgttttcataagttcaaccaaaatg 324  Q
    ||||||| ||||||||||  ||| | ||| ||| ||||||||||   |||||| | | || ||||||||||| | ||||| ||||| |||  | |||  |    
T  21196271 taagttgtttttataagctttattgcagaacttaagaaaataagttaaaaaaagcatatgaaaattgtcata-gctgtttgcataaattcttctaaacag 21196369  T
Q  325 tctcaaaaaacttatgccagtagataagctcaaataa 361  Q
    ||||| ||||||||||| |||| ||||||||||||||    
T  21196370 tctcacaaaacttatgctagtatataagctcaaataa 21196406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 335 - 363
Target Start/End: Original strand, 22759273 - 22759301
Alignment:
Q  335 cttatgccagtagataagctcaaataagt 363  Q
    |||||||||||||||||||||||||||||    
T  22759273 cttatgccagtagataagctcaaataagt 22759301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 27863894 - 27863858
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagcagaag 164  Q
    ||||||||||||||||||||| ||||||||||| |||    
T  27863894 tttggataaacaacttatttgtagcttatagcacaag 27863858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 156
Target Start/End: Original strand, 28210328 - 28210356
Alignment:
Q  128 tttggataaacaacttatttgcagcttat 156  Q
    |||||||||||||||||||||||||||||    
T  28210328 tttggataaacaacttatttgcagcttat 28210356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 314
Target Start/End: Original strand, 28614420 - 28614524
Alignment:
Q  210 tttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttgttttcata 309  Q
    |||||||||||| ||| || || ||||| ||||  ||| ||||| |||  |||| |||   ||||||| |||||| ||||||| ||| ||||||||||||    
T  28614420 tttttgtatatgatattagctgtttttaaaagctgtattggagaacttatgaaattaaactgaaaaaagcttgtgaaaattgttatatgttgttttcata 28614519  T
Q  310 agttc 314  Q
    |||||    
T  28614520 agttc 28614524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 160
Target Start/End: Complemental strand, 30571120 - 30571088
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagca 160  Q
    |||||||||||| ||||||||||||||||||||    
T  30571120 tttggataaacagcttatttgcagcttatagca 30571088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 334 - 374
Target Start/End: Complemental strand, 40371613 - 40371573
Alignment:
Q  334 acttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||||| |||| |||||||||||||||||| ||||||||||    
T  40371613 acttataccagaagataagctcaaataagtcaatccaaaca 40371573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 156
Target Start/End: Complemental strand, 40378025 - 40377997
Alignment:
Q  128 tttggataaacaacttatttgcagcttat 156  Q
    |||||||||||||||||||||||||||||    
T  40378025 tttggataaacaacttatttgcagcttat 40377997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 374
Target Start/End: Complemental strand, 40598440 - 40598404
Alignment:
Q  338 atgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||| ||||||||||||||||||||| ||||||||||    
T  40598440 atgctagtagataagctcaaataagtcaatccaaaca 40598404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 6e-29; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 196 - 361
Target Start/End: Original strand, 26771238 - 26771403
Alignment:
Q  196 ataaaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcat 295  Q
    ||||| ||||||||||||||||||||||||||| |  |||||||||  ||||  |||| |||  |||||||||  ||||||  ||| || ||||||||||    
T  26771238 ataaacttaaattgtttttgtatatgctataagctttttttataagatatattagagaacttatgaaaataagttgaaaaaggcttttgaaaattgtcat 26771337  T
Q  296 aagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataa 361  Q
    ||| |||||||||||||||  |||||  |||||| |||||||||||| ||||||||||||| ||||    
T  26771338 aagctgttttcataagttctcccaaacagtctcacaaaacttatgcccgtagataagctcagataa 26771403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 196 - 374
Target Start/End: Complemental strand, 10758353 - 10758176
Alignment:
Q  196 ataaaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcat 295  Q
    ||||| ||||||||||||||||||||||||||||||  ||||||||| ||||  |  | |||  ||||| |||  ||||||| ||| || ||||||||||    
T  10758353 ataaagttaaattgtttttgtatatgctataagttgtctttataagctatattagcaa-cttatgaaaacaagctgaaaaaagcttttgaaaattgtcat 10758255  T
Q  296 aagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||| ||||||||||| ||| | ||||  |||||| ||||||||||  || ||||||| |||||||||| ||| ||||||    
T  10758254 aagctgttttcataaattctatcaaacagtctcacaaaacttatgttagcagataagttcaaataagtcaattcaaaca 10758176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 202 - 362
Target Start/End: Original strand, 18133635 - 18133795
Alignment:
Q  202 ttaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttg 301  Q
    |||||||| |||||||||| ||||||| || |||||||| | |||| ||||| |||  |||||||||  ||||||| |||||| ||||||| ||||| ||    
T  18133635 ttaaattgcttttgtatatcctataagctggttttataaactatattggagaacttatgaaaataagctgaaaaaagcttgtgaaaattgttataagctg 18133734  T
Q  302 ttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataag 362  Q
     ||||| ||| ||  |||||  |||||| ||||||||| | |||||||||||| |||||||    
T  18133735 atttcacaagctctcccaaacagtctcacaaaacttatactagtagataagcttaaataag 18133795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 196 - 363
Target Start/End: Complemental strand, 35534708 - 35534543
Alignment:
Q  196 ataaaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcat 295  Q
    ||||| ||||||||||||||||| |  |||| |||| ||| |||||  |||| ||||| |||  |||| |||| |||||||| |||||  ||||||||||    
T  35534708 ataaagttaaattgtttttgtatgt--tatatgttgttttcataagttatattggagaacttatgaaagtaagccgaaaaaagcttgttaaaattgtcat 35534611  T
Q  296 aagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagt 363  Q
    ||| |||||||| ||||||   ||||  |||||| ||||||||||  |||||||||||||||||||||    
T  35534610 aagctgttttcacaagttctctcaaacagtctcacaaaacttatgttagtagataagctcaaataagt 35534543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 324 - 375
Target Start/End: Complemental strand, 9130288 - 9130237
Alignment:
Q  324 gtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaacaa 375  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  9130288 gtctcacaaaacttatgccagtagataagctcaaataagctaatccaaacaa 9130237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 202 - 374
Target Start/End: Original strand, 38602312 - 38602478
Alignment:
Q  202 ttaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttg 301  Q
    |||||||| ||||| |||||||||||| || |||||||||| |||  |||||  ||| ||||||||| |||||| | ||||||  | | |  ||||| ||    
T  38602312 ttaaattgcttttgcatatgctataagctgtttttataagctatactggagaatttgtgaaaataagccgaaaacagcttgtg--agtag--ataagctg 38602407  T
Q  302 ttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||  ||||||||  |||||  | |||| |||||||||| |||||||||||||||||||||| ||||||||||    
T  38602408 ttt--ataagttctcccaaacagcctcacaaaacttatgtcagtagataagctcaaataagtcaatccaaaca 38602478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 196 - 362
Target Start/End: Original strand, 12976186 - 12976351
Alignment:
Q  196 ataaaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcat 295  Q
    ||||| |||||||  |||| ||||||||| || ||| |||||||||| ||||  |||| |||  |||| ||||  ||||||| ||| || ||||||| |     
T  12976186 ataaagttaaattaattttttatatgctacaatttgtttttataagctatattagagaacttatgaaa-taagctgaaaaaagcttttgaaaattgttag 12976284  T
Q  296 aagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataag 362  Q
    ||| |||| |||||||||| || |||  |||||| ||| ||||||| ||||||||||||||||||||    
T  12976285 aagctgttctcataagttctactaaacagtctcacaaaccttatgctagtagataagctcaaataag 12976351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 202 - 363
Target Start/End: Original strand, 27028810 - 27028971
Alignment:
Q  202 ttaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttg 301  Q
    ||||||||||| ||||||||||||||| || ||| |||||| || | ||||| |||  |||||||||  ||||| | ||| || ||| |||| |||| ||    
T  27028810 ttaaattgtttgtgtatatgctataagctgttttcataagctatcttggagagcttatgaaaataagctgaaaatagcttatgaaaaatgtcctaagctg 27028909  T
Q  302 ttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagt 363  Q
    |||||| || |||  |||||   |||||  |||||||||||||| ||||| |||||||||||    
T  27028910 ttttcagaatttctcccaaacaatctcactaaacttatgccagtggataaactcaaataagt 27028971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 273 - 374
Target Start/End: Complemental strand, 36963374 - 36963273
Alignment:
Q  273 aaaaatcttgtgcaaattgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaa 372  Q
    ||||| ||| || ||||||||| ||| ||||||  |||||||  |||||  |||||| ||||||||||||||||||| ||||||||||||  ||||||||    
T  36963374 aaaaagcttttgaaaattgtcaaaagctgtttttgtaagttctcccaaacagtctcacaaaacttatgccagtagattagctcaaataagccaatccaaa 36963275  T
Q  373 ca 374  Q
    ||    
T  36963274 ca 36963273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 286 - 361
Target Start/End: Original strand, 41589649 - 41589724
Alignment:
Q  286 aaattgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataa 361  Q
    ||||||| |||||||||||||||||||||  | |||  |||||||||| |||||| ||||||| ||||||||||||    
T  41589649 aaattgttataagttgttttcataagttctccaaaacagtctcaaaaagcttatgtcagtagacaagctcaaataa 41589724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 35644021 - 35643919
Alignment:
Q  260 gaaaataaggcgaaaaaatcttgtgcaaattgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaat 359  Q
    |||||||||  ||||||| ||| || ||||||||||||  | ||||||||||||   |||||  |||||| |||| |||||||||||||||||| |||||    
T  35644021 gaaaataagttgaaaaaagcttatgaaaattgtcataaactattttcataagttatcccaaacagtctcacaaaaattatgccagtagataagcccaaat 35643922  T
Q  360 aag 362  Q
    |||    
T  35643921 aag 35643919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 290 - 374
Target Start/End: Complemental strand, 14280425 - 14280340
Alignment:
Q  290 tgtcataagttgttttcataagttcaaccaaaatgtctca-aaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||||||| |||||||||||| |||| |||||   || || ||||||||||||||||||||||  |||||||||| ||||||||||    
T  14280425 tgtcataaattgttttcataaattcacccaaacaatcacacaaaaacttatgccagtagataaaatcaaataagtcaatccaaaca 14280340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 197 - 374
Target Start/End: Complemental strand, 30251550 - 30251373
Alignment:
Q  197 taaaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcata 296  Q
    |||||| || ||||| ||||||||| |||||| || ||| |||||| || | |||   |||  |||||||||  | ||||| ||| || ||| ||  |||    
T  30251550 taaaataaagttgttattgtatatgttataagctgttttcataagctatcttggaccacttatgaaaataagctgtaaaaagcttatgaaaaatgcaata 30251451  T
Q  297 agttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    || ||||||| |||||||  |||||  ||||||  ||||||||| |||||||||||||||||||||  ||||||||||    
T  30251450 agctgttttcgtaagttctcccaaacagtctcacgaaacttatgtcagtagataagctcaaataagccaatccaaaca 30251373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 372
Target Start/End: Complemental strand, 43717927 - 43717855
Alignment:
Q  300 tgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaa 372  Q
    |||||||||||||||  |||||  |||||| |||||||||| || ||||||||||||||||||  ||||||||    
T  43717927 tgttttcataagttctcccaaatagtctcacaaaacttatgtcaatagataagctcaaataagccaatccaaa 43717855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 331 - 374
Target Start/End: Original strand, 27493045 - 27493088
Alignment:
Q  331 aaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||||||||| |||| |||||||||||||||||||||||||||||    
T  27493045 aaaacttataccagcagataagctcaaataagttaatccaaaca 27493088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 290 - 373
Target Start/End: Complemental strand, 31716230 - 31716147
Alignment:
Q  290 tgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaac 373  Q
    ||||||||| |||||||| ||||||  | |||  |||||||||||  ||||||| |||||||||||||||||| |||| |||||    
T  31716230 tgtcataagctgttttcaaaagttctccgaaacagtctcaaaaaaaatatgccaatagataagctcaaataagctaattcaaac 31716147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 296 - 374
Target Start/End: Original strand, 34849176 - 34849255
Alignment:
Q  296 aagttgttttcataagttcaaccaaaatgtctcaaaaa-acttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||||||||||||| |||||  |||||  |||||||||  |||||||||||||| |||||||||||||| |||||| ||||    
T  34849176 aagttgttttcattagttctcccaaacagtctcaaaagtacttatgccagtagctaagctcaaataagctaatccgaaca 34849255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 374
Target Start/End: Original strand, 9700114 - 9700152
Alignment:
Q  336 ttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  9700114 ttatgctagtagataagctcaaataagttaatccaaaca 9700152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 171
Target Start/End: Complemental strand, 9956998 - 9956956
Alignment:
Q  129 ttggataaacaacttatttgcagcttatagcagaagcacttat 171  Q
    |||||||||||||||||||| ||||||||||| ||||||||||    
T  9956998 ttggataaacaacttatttgtagcttatagcacaagcacttat 9956956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 290 - 372
Target Start/End: Complemental strand, 32840989 - 32840907
Alignment:
Q  290 tgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaa 372  Q
    |||||||||||||||||||||||||  |||||  |||||  ||||||| ||  ||||||||||||||| ||||| ||| ||||    
T  32840989 tgtcataagttgttttcataagttctcccaaacagtctcgcaaaacttgtgtgagtagataagctcaagtaagtcaattcaaa 32840907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 362
Target Start/End: Original strand, 38648324 - 38648490
Alignment:
Q  196 ataaaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcat 295  Q
    |||||||||| ||||||||||||||| ||| ||||| ||| |||||| || | | ||| |||  |||| || |   |||||| ||| ||  || ||||||    
T  38648324 ataaaattaacttgtttttgtatatgttatgagttgttttcataagctatcttgtagaacttatgaaattacgcttaaaaaagcttatgagaactgtcat 38648423  T
Q  296 aagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataag 362  Q
     || |||||||||||| ||  |||||  |||||| |||||||||| |||||||||| || |||||||    
T  38648424 gagctgttttcataaggtctcccaaacagtctcacaaaacttatgtcagtagataatcttaaataag 38648490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 290 - 362
Target Start/End: Complemental strand, 1058080 - 1058008
Alignment:
Q  290 tgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataag 362  Q
    |||||||||  ||||||| ||||||  |||||  |||||| ||||||||||  ||||||||||||||||||||    
T  1058080 tgtcataagcagttttcaaaagttctcccaaacagtctcacaaaacttatgtaagtagataagctcaaataag 1058008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 372
Target Start/End: Complemental strand, 12497041 - 12496993
Alignment:
Q  324 gtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaa 372  Q
    |||||| |||||||||||||| |||||||||||||||| | ||||||||    
T  12497041 gtctcacaaaacttatgccaggagataagctcaaataaatcaatccaaa 12496993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 160
Target Start/End: Complemental strand, 14956492 - 14956460
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagca 160  Q
    |||||||||||||||||||||||||||||||||    
T  14956492 tttggataaacaacttatttgcagcttatagca 14956460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 197 - 241
Target Start/End: Original strand, 16734003 - 16734047
Alignment:
Q  197 taaaattaaattgtttttgtatatgctataagttgcttttataag 241  Q
    |||| |||||||||||||||||||||||||||||| ||| |||||    
T  16734003 taaacttaaattgtttttgtatatgctataagttgttttgataag 16734047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 160
Target Start/End: Complemental strand, 29819077 - 29819045
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagca 160  Q
    |||||||||||||||||||||||||||||||||    
T  29819077 tttggataaacaacttatttgcagcttatagca 29819045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 331 - 379
Target Start/End: Original strand, 42052151 - 42052199
Alignment:
Q  331 aaaacttatgccagtagataagctcaaataagttaatccaaacaaacct 379  Q
    |||||||||||||||||||||| | | |||||| |||||||||||||||    
T  42052151 aaaacttatgccagtagataagtttagataagtcaatccaaacaaacct 42052199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 207 - 314
Target Start/End: Original strand, 12010870 - 12010977
Alignment:
Q  207 ttgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttgttttc 306  Q
    |||||||||| |||||||||||||| ||| |||| |  ||| ||||| ||| |||||||||  |||||| |  ||| | ||||||| ||||| |||||||    
T  12010870 ttgtttttgtgtatgctataagttgttttcataatctgtattggagaactttagaaaataaaccgaaaatagtttgcgaaaattgttataagctgttttc 12010969  T
Q  307 ataagttc 314  Q
    || |||||    
T  12010970 atcagttc 12010977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 171
Target Start/End: Original strand, 40981003 - 40981046
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagcagaagcacttat 171  Q
    |||||||||||| |||||||||||||||||||| |||| |||||    
T  40981003 tttggataaacagcttatttgcagcttatagcacaagcgcttat 40981046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 374
Target Start/End: Complemental strand, 42215258 - 42215219
Alignment:
Q  335 cttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||||||||||| ||||||||||||||||||||| |||||    
T  42215258 cttatgccagtaaataagctcaaataagttaatctaaaca 42215219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 374
Target Start/End: Complemental strand, 42893452 - 42893409
Alignment:
Q  331 aaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||| ||||||| |||||||| ||||||||||||||||||||||    
T  42893452 aaaaattatgccggtagataaactcaaataagttaatccaaaca 42893409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 235 - 374
Target Start/End: Complemental strand, 43045783 - 43045644
Alignment:
Q  235 ttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaa 334  Q
    |||||| | |||| ||||| |||  |||||||||  ||||||| ||| |  |||||||  |||| |||||||||||| ||  | |||  |||||| |||     
T  43045783 ttataaactatattggagaacttatgaaaataagttgaaaaaagcttattaaaattgttgtaagctgttttcataagatctccaaaacagtctcacaaat 43045684  T
Q  335 cttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||||||| |||||||||||| |||||||  ||||||||||    
T  43045683 cttatgctagtagataagcttaaataagccaatccaaaca 43045644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 374
Target Start/End: Complemental strand, 44236781 - 44236742
Alignment:
Q  335 cttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||||||||||||||||| |||||||||| |||||||||||    
T  44236781 cttatgccagtagataaactcaaataaggtaatccaaaca 44236742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 374
Target Start/End: Complemental strand, 10075510 - 10075472
Alignment:
Q  336 ttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||||||||||||||| |||||||||||||||| |||||    
T  10075510 ttatgccagtagataaactcaaataagttaatcgaaaca 10075472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 370
Target Start/End: Original strand, 28763417 - 28763515
Alignment:
Q  272 aaaaaatcttgtgcaaattgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatcca 370  Q
    |||||| ||| || ||||||| ||||| |||||||||||||||  |||||  |||||| ||||||||||  | ||||||||| | |||||  |||||||    
T  28763417 aaaaaagcttatgaaaattgttataagctgttttcataagttctcccaaacagtctcacaaaacttatgttactagataagcccgaataaactaatcca 28763515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 202 - 248
Target Start/End: Original strand, 38750337 - 38750383
Alignment:
Q  202 ttaaattgtttttgtatatgctataagttgcttttataagcaatatc 248  Q
    ||||| |||||||||||||| ||||||||| |||||||||| |||||    
T  38750337 ttaaaatgtttttgtatatgatataagttgtttttataagctatatc 38750383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 340
Target Start/End: Original strand, 6881908 - 6882044
Alignment:
Q  204 aaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataag-gcgaaaaaatcttgtgcaaattgtcataagttgt 302  Q
    ||||||||||| ||||||||||||| || |||||||||| | || ||||| |||  |||||||||    |||||| |||||  ||||| |||| || |||    
T  6881908 aaattgtttttatatatgctataagctg-ttttataagctaaattggagaacttatgaaaataagcaaaaaaaaagcttgttaaaattatcatgagctgt 6882006  T
Q  303 tttcataagttcaaccaaaatgtctcaaaaaacttatg 340  Q
    ||||||| ||||  |||||  |||||| ||||||||||    
T  6882007 tttcataggttctcccaaacagtctcacaaaacttatg 6882044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 157
Target Start/End: Original strand, 27752435 - 27752464
Alignment:
Q  128 tttggataaacaacttatttgcagcttata 157  Q
    ||||||||||||||||||||||||||||||    
T  27752435 tttggataaacaacttatttgcagcttata 27752464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 157
Target Start/End: Original strand, 34236045 - 34236074
Alignment:
Q  128 tttggataaacaacttatttgcagcttata 157  Q
    ||||||||||||||||||||||||||||||    
T  34236045 tttggataaacaacttatttgcagcttata 34236074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 375
Target Start/End: Original strand, 44792719 - 44792808
Alignment:
Q  286 aaattgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaacaa 375  Q
    |||||| ||||||||||| |  |||||||  | |||  |||||| | || |||| ||||||||||||||||||||||  |||||||||||    
T  44792719 aaattgccataagttgttgttctaagttctccaaaacagtctcacataatttatcccagtagataagctcaaataagccaatccaaacaa 44792808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 1929954 - 1929994
Alignment:
Q  132 gataaacaacttatttgcagcttatagcagaagcacttatg 172  Q
    ||||||||||||| ||||||||||||||| |||| ||||||    
T  1929954 gataaacaacttacttgcagcttatagcacaagcgcttatg 1929994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 342 - 378
Target Start/End: Complemental strand, 7712002 - 7711966
Alignment:
Q  342 cagtagataagctcaaataagttaatccaaacaaacc 378  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  7712002 cagtagataagctcaaataagtcaattcaaacaaacc 7711966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 11861791 - 11861823
Alignment:
Q  210 tttttgtatatgctataagttgcttttataagc 242  Q
    |||||||||||||||||||||| ||||||||||    
T  11861791 tttttgtatatgctataagttgtttttataagc 11861823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 14926940 - 14926900
Alignment:
Q  335 cttatgccagtagataagctcaaataagttaatccaaacaa 375  Q
    |||||||||||| ||||| |||||||||| |||||||||||    
T  14926940 cttatgccagtaaataagttcaaataagtcaatccaaacaa 14926900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 160
Target Start/End: Original strand, 18133559 - 18133591
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagca 160  Q
    |||||||||||||||||||||||||||| ||||    
T  18133559 tttggataaacaacttatttgcagcttacagca 18133591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 230
Target Start/End: Original strand, 29205787 - 29205815
Alignment:
Q  202 ttaaattgtttttgtatatgctataagtt 230  Q
    |||||||||||||||||||||||||||||    
T  29205787 ttaaattgtttttgtatatgctataagtt 29205815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 342 - 374
Target Start/End: Original strand, 37461260 - 37461292
Alignment:
Q  342 cagtagataagctcaaataagttaatccaaaca 374  Q
    ||||||||||| |||||||||||||||||||||    
T  37461260 cagtagataagttcaaataagttaatccaaaca 37461292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 314
Target Start/End: Original strand, 37945576 - 37945687
Alignment:
Q  202 ttaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttg 301  Q
    |||||||  |||||||||||||||| |||| |||||||||| |||| | | | |||  |||||||||   |||||  ||| || ||||||||||||| ||    
T  37945576 ttaaattaattttgtatatgctata-gttgtttttataagctatattgtacaacttctgaaaataagttaaaaaatgcttatggaaattgtcataagctg 37945674  T
Q  302 ttttcataagttc 314  Q
    |||||| ||||||    
T  37945675 ttttcagaagttc 37945687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 2e-28; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 202 - 374
Target Start/End: Complemental strand, 17822956 - 17822784
Alignment:
Q  202 ttaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttg 301  Q
    |||||||||| || |||||||||||||||| ||| |||||| || | ||||| |||  |||||||||   |||||| ||| || ||| ||||||||| ||    
T  17822956 ttaaattgttattttatatgctataagttgttttcataagctatcttggagaacttatgaaaataagctaaaaaaagcttatgaaaaatgtcataagctg 17822857  T
Q  302 ttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||||||| ||||  | |||  |||||| | |||||||| |||||||||||||||||||||||||||||||||    
T  17822856 ttttcatatgttctcctaaatagtctcacagaacttatgtcagtagataagctcaaataagttaatccaaaca 17822784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 216 - 374
Target Start/End: Original strand, 54426036 - 54426194
Alignment:
Q  216 tatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttgttttcataagttca 315  Q
    |||||| ||||||||| |||||||| | |||| ||||| |||  ||||||||   ||||||| ||| || ||||||||||||| ||||||| |||||||     
T  54426036 tatatgttataagttgtttttataatctatattggagaacttatgaaaataacttgaaaaaagcttatgaaaattgtcataagctgttttcctaagttct 54426135  T
Q  316 accaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
     ||||   |||||| ||||||||||||||||||||||||||||||||  ||||||||||    
T  54426136 cccaagcagtctcacaaaacttatgccagtagataagctcaaataagccaatccaaaca 54426194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 207 - 374
Target Start/End: Complemental strand, 21731742 - 21731575
Alignment:
Q  207 ttgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttgttttc 306  Q
    |||||||||||| |||||||||||| |||||||||| |||| |||||  ||  |||| ||||  |||||||  || || ||||||| ||||| |||||||    
T  21731742 ttgtttttgtatgtgctataagttgtttttataagctatattggagaatttatgaaagtaagttgaaaaaagtttatgaaaattgtgataagctgttttc 21731643  T
Q  307 ataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||||||||  |||||   ||||| |||||||||| ||||||||| ||||||||||   ||||||||||    
T  21731642 ataagttctcccaaacaatctcacaaaacttatgtcagtagatatgctcaaataaaccaatccaaaca 21731575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 204 - 310
Target Start/End: Complemental strand, 7839450 - 7839344
Alignment:
Q  204 aaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttgtt 303  Q
    |||||||||||||||||||||||| ||| |||||||||| | || | ||| |||  |||||||||  ||||||| ||| || ||||||||||||||||||    
T  7839450 aaattgtttttgtatatgctataaattgtttttataagctagattgaagaacttacgaaaataagttgaaaaaagcttatgaaaattgtcataagttgtt 7839351  T
Q  304 ttcataa 310  Q
    |||||||    
T  7839350 ttcataa 7839344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 196 - 375
Target Start/End: Original strand, 41336733 - 41336912
Alignment:
Q  196 ataaaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcat 295  Q
    ||||| |||||||||||||||||||| ||||| ||| |||| ||||| |    | |||  ||  |||||||||  ||||||| ||| || ||| ||||||    
T  41336733 ataaagttaaattgtttttgtatatgttataaattgtttttctaagctagggtgaagaatttacgaaaataagttgaaaaaagcttatgaaaactgtcat 41336832  T
Q  296 aagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaacaa 375  Q
    ||| ||||||| |||||||  || || | ||||| ||||||||||  ||||||||| ||||||||||| |||||||||||    
T  41336833 aagctgttttcttaagttcttcctaactatctcacaaaacttatgtgagtagataaactcaaataagtcaatccaaacaa 41336912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 196 - 374
Target Start/End: Complemental strand, 53294211 - 53294033
Alignment:
Q  196 ataaaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcat 295  Q
    ||||| |||||||||||||||||||||||||||||| |||||||| | ||||  |||| |||  ||||| |||  ||||| | ||| || |||   ||||    
T  53294211 ataaatttaaattgtttttgtatatgctataagttgtttttataaactatattagagaacttatgaaaacaagctgaaaatagcttttgaaaaccatcat 53294112  T
Q  296 aagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    || |||||||||| ||||   |||||  |||| | |||||| ||| |||||||||||| ||||| ||| ||||||||||    
T  53294111 aatttgttttcatgagttttcccaaacagtcttacaaaactcatgtcagtagataagcacaaattagtcaatccaaaca 53294033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 202 - 347
Target Start/End: Complemental strand, 50681180 - 50681035
Alignment:
Q  202 ttaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttg 301  Q
    |||||||||||||||||||||||||||||| || ||||||| |||| |||||  ||  ||||||||   ||||||| ||| || |||||||||| |  ||    
T  50681180 ttaaattgtttttgtatatgctataagttgtttatataagctatattggagaaattatgaaaataaattgaaaaaagcttatgaaaattgtcattaactg 50681081  T
Q  302 ttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtag 347  Q
    |||||||||||||   ||||  |||||| |||||||| || |||||    
T  50681080 ttttcataagttctctcaaacagtctcacaaaacttaagcgagtag 50681035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 196 - 372
Target Start/End: Original strand, 22030176 - 22030352
Alignment:
Q  196 ataaaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcat 295  Q
    ||||| ||| ||| |||||||||||||||||||||| | ||| |||  | ||  |||| |||  ||||||||   || |||| ||| || ||||||||||    
T  22030176 ataaagttatattatttttgtatatgctataagttgttcttacaagttaaattagagaacttatgaaaataacctgagaaaagcttttgaaaattgtcat 22030275  T
Q  296 aagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaa 372  Q
    ||| |||||||||||||||  |||||  | |||| ||||||||||| | |||| |||||||||||||| ||| ||||    
T  22030276 aagctgttttcataagttctcccaaataggctcacaaaacttatgctaatagacaagctcaaataagtcaatacaaa 22030352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 207 - 374
Target Start/End: Original strand, 2244032 - 2244202
Alignment:
Q  207 ttgtttttgtat-atgctataagttgcttt--tataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttgtt 303  Q
    |||||||||||| ||||||||||||| |||  ||||||| |||| ||||| |||  |||||||||| |||||||  || || | ||||||||||| ||||    
T  2244032 ttgtttttgtattatgctataagttgttttaatataagctatattggagaacttatgaaaataaggtgaaaaaagtttatgaatattgtcataagctgtt 2244131  T
Q  304 ttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    || | || |||  |||||  || |||||||||||||| |||||||||| |||  |||| | ||||||||||    
T  2244132 tttaaaaattctcccaaacagtttcaaaaaacttatgtcagtagataaactcggataaatcaatccaaaca 2244202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 271 - 373
Target Start/End: Complemental strand, 15173325 - 15173223
Alignment:
Q  271 gaaaaaatcttgtgcaaattgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatcca 370  Q
    ||||||| ||| || ||||||||||||| | |||||||||  ||  |||||  |||||| |||||||||| ||||||||||| |||||||||| ||||||    
T  15173325 gaaaaaaacttatgaaaattgtcataagctattttcataaagtctcccaaacagtctcacaaaacttatgtcagtagataagttcaaataagtcaatcca 15173226  T
Q  371 aac 373  Q
    |||    
T  15173225 aac 15173223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 210 - 374
Target Start/End: Complemental strand, 49940252 - 49940086
Alignment:
Q  210 tttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcga-aaaaatcttgtgcaaattgtcat-aagttgttttca 307  Q
    ||||||||||||||||||| || |||||||||| | |||||||| |||  | ||||||| | | ||||| |||||  ||||| || | ||| ||||||||    
T  49940252 tttttgtatatgctataagctgtttttataagctacatcggagaacttacggaaataagccaataaaaagcttgttaaaattatctttaagctgttttca 49940153  T
Q  308 taagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||||||   ||||  |||||| ||||||||||  || || ||||||||||||||| ||||||||||    
T  49940152 taagttctctcaaacagtctcacaaaacttatgttagcaggtaagctcaaataagtcaatccaaaca 49940086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 213 - 314
Target Start/End: Complemental strand, 50662818 - 50662717
Alignment:
Q  213 ttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttgttttcataagt 312  Q
    ||||||||||||||||||| || ||||||| |||| |||||  ||| |||||||||  ||||||| ||| || |||||||||| |  |||||||||||||    
T  50662818 ttgtatatgctataagttgtttatataagctatattggagaaattgtgaaaataagttgaaaaaagcttatgaaaattgtcattaactgttttcataagt 50662719  T
Q  313 tc 314  Q
    ||    
T  50662718 tc 50662717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 260 - 375
Target Start/End: Original strand, 24169300 - 24169415
Alignment:
Q  260 gaaaataaggcgaaaaaatcttgtgcaaattgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaat 359  Q
    |||||||||  ||||||||||| || ||| ||||||||| | |||| | ||||||   ||||  |||||| ||||||||||||||||||||| ||| |||    
T  24169300 gaaaataagttgaaaaaatcttatgaaaaatgtcataagctatttttaaaagttctctcaaatagtctcacaaaacttatgccagtagataaactctaat 24169399  T
Q  360 aagttaatccaaacaa 375  Q
    |||  |||||||||||    
T  24169400 aagccaatccaaacaa 24169415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 225 - 380
Target Start/End: Complemental strand, 39603238 - 39603084
Alignment:
Q  225 taagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttgttttcataagttcaaccaaaatg 324  Q
    ||||||| |||||||||  |||| ||||| |||  ||||||||    |||||| ||| |  ||||||||||||| ||||||| |||||||  |||||  |    
T  39603238 taagttgtttttataaggtatattggagaacttatgaaaataacttaaaaaaagcttataaaaattgtcataagctgttttcctaagttctcccaaacag 39603139  T
Q  325 tctcaaaaaacttatgccagtagataagctcaaataagttaatccaaacaaacctt 380  Q
    ||||| ||||||||| ||| |||| |||||||||||||  ||||||||||| ||||    
T  39603138 tctcacaaaacttataccaataga-aagctcaaataagccaatccaaacaagcctt 39603084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 288 - 373
Target Start/End: Original strand, 2386522 - 2386607
Alignment:
Q  288 attgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaac 373  Q
    ||||||||||||||||||||||| |||   |||| |||  || |||| |||||||||||| |||||||||| |||| |||||||||    
T  2386522 attgtcataagttgttttcataacttctcacaaattgtagcacaaaatttatgccagtagctaagctcaaacaagtcaatccaaac 2386607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 44863149 - 44863108
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagcagaagcactt 169  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  44863149 tttggataaacaacttatttgcagcttatagcacaagcactt 44863108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 202 - 314
Target Start/End: Original strand, 20108988 - 20109100
Alignment:
Q  202 ttaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttg 301  Q
    |||| ||||||||||||||| |||||| || |||||||||  ||||  |||| |||  |||||| || |||||||| |||||| || || ||| ||| ||    
T  20108988 ttaagttgtttttgtatatggtataagctgtttttataagatatattagagaacttttgaaaatgagtcgaaaaaagcttgtgaaatttttcacaaggtg 20109087  T
Q  302 ttttcataagttc 314  Q
    |||||||||||||    
T  20109088 ttttcataagttc 20109100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 290 - 370
Target Start/End: Complemental strand, 39011131 - 39011051
Alignment:
Q  290 tgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatcca 370  Q
    ||||||||| |||||||||| ||||  ||||| |||||||  | ||||||||| | |||||||||||||||||| ||||||    
T  39011131 tgtcataagctgttttcatatgttctcccaaactgtctcacgatacttatgcccgaagataagctcaaataagtcaatcca 39011051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 128 - 171
Target Start/End: Original strand, 17204011 - 17204054
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagcagaagcacttat 171  Q
    ||||||||||||||||||||||||||||||| | ||||||||||    
T  17204011 tttggataaacaacttatttgcagcttatagaacaagcacttat 17204054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 331 - 374
Target Start/End: Complemental strand, 27043792 - 27043749
Alignment:
Q  331 aaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||||||||| |||||||||||||||||||||| ||||||||||    
T  27043792 aaaacttatgtcagtagataagctcaaataagtcaatccaaaca 27043749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 47119132 - 47119089
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagcagaagcacttat 171  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||    
T  47119132 tttggataaacaacttatttgcaacttatagcacaagcacttat 47119089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 372
Target Start/End: Complemental strand, 22539071 - 22538998
Alignment:
Q  299 ttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaa-taagttaatccaaa 372  Q
    |||||||| |||||||  ||||| ||||||| ||| |||||||||||||||||||||||| ||||| ||||||||    
T  22539071 ttgttttcgtaagttctcccaaattgtctcacaaa-cttatgccagtagataagctcaaagtaagtcaatccaaa 22538998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 374
Target Start/End: Complemental strand, 39691118 - 39691068
Alignment:
Q  324 gtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||||| ||||||||||| ||||||||||||||||||||| ||| ||||||    
T  39691118 gtctcacaaaacttatgctagtagataagctcaaataagtcaattcaaaca 39691068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 170
Target Start/End: Original strand, 49202529 - 49202571
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagcagaagcactta 170  Q
    ||||||||||||||||||||||||||||||| | |||||||||    
T  49202529 tttggataaacaacttatttgcagcttatagtacaagcactta 49202571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 372
Target Start/End: Complemental strand, 52315196 - 52315118
Alignment:
Q  294 ataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaa 372  Q
    |||||||||||| ||||||||  |||||   ||||| |||||||| | |||||||||| ||||||||||| ||||||||    
T  52315196 ataagttgttttgataagttcttccaaacaatctcacaaaacttacgtcagtagataaactcaaataagtcaatccaaa 52315118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 210 - 334
Target Start/End: Complemental strand, 46588157 - 46588032
Alignment:
Q  210 tttttgtatatgctataagttgctttt-ataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttgttttcat 308  Q
    ||||| |||||||||||||||| |||| |||||  |||| ||||| |||  |||||||||  | ||||  ||| || ||||||||||||||| ||||| |    
T  46588157 tttttatatatgctataagttgttttttataagttatattggagaacttatgaaaataagttggaaaaggcttatgaaaattgtcataagttattttcgt 46588058  T
Q  309 aagttcaaccaaaatgtctcaaaaaa 334  Q
    |||||| ||||||  | |||||||||    
T  46588057 aagttctaccaaacaggctcaaaaaa 46588032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 290 - 374
Target Start/End: Complemental strand, 437167 - 437083
Alignment:
Q  290 tgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||||||||||||||||||||||||   |||||  |||||| |||| |||||| | |||||| ||||||||||   ||||||||||    
T  437167 tgtcataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 437083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 374
Target Start/End: Complemental strand, 35571630 - 35571550
Alignment:
Q  294 ataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||||| |||||| | ||||||  ||||| | || || ||||||||||| ||||||||||||||||||||  ||||||||||    
T  35571630 ataagctgtttttaaaagttctcccaaactatcccacaaaacttatgctagtagataagctcaaataagccaatccaaaca 35571550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 374
Target Start/End: Complemental strand, 42404029 - 42403942
Alignment:
Q  286 aaattgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||||||||||||| |||||||| || |||  |||||  | | || |||||||||| |||| ||||||||||||||||| ||||||||||    
T  42404029 aaattgtcataagctgttttcagaaattctcccaaatag-cacacaaaacttatgtcagttgataagctcaaataagtcaatccaaaca 42403942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 290 - 362
Target Start/End: Complemental strand, 49939954 - 49939882
Alignment:
Q  290 tgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataag 362  Q
    ||||||||| | |||||||||||||  |||||  |||||| ||| ||||||| |||||||||||| |||||||    
T  49939954 tgtcataagctcttttcataagttcttccaaatagtctcacaaagcttatgctagtagataagcttaaataag 49939882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 267
Target Start/End: Original strand, 9760413 - 9760484
Alignment:
Q  196 ataaaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataa 267  Q
    ||||| ||||||| |||||  ||||||||||||||| |||||||||| |||| ||||| |||  ||||||||    
T  9760413 ataaagttaaattcttttttaatatgctataagttgtttttataagctatattggagaacttatgaaaataa 9760484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 25904411 - 25904368
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagcagaagcacttat 171  Q
    ||||||||||||||| |||||||| |||||||| ||||||||||    
T  25904411 tttggataaacaactcatttgcagattatagcacaagcacttat 25904368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 33587039 - 33586980
Alignment:
Q  209 gtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataag 268  Q
    ||||||||||||| |||| |||| |||||||||| |||||||||| |||  |||||||||    
T  33587039 gtttttgtatatgttataggttgtttttataagctatatcggagaacttatgaaaataag 33586980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 39603630 - 39603587
Alignment:
Q  126 tatttggataaacaacttatttgcagcttatagcagaagcactt 169  Q
    |||||||||||||| |||||||||||||||||||| | ||||||    
T  39603630 tatttggataaacagcttatttgcagcttatagcacaggcactt 39603587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 159
Target Start/End: Complemental strand, 45935410 - 45935379
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagc 159  Q
    ||||||||||||||||||||||||||||||||    
T  45935410 tttggataaacaacttatttgcagcttatagc 45935379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 202 - 241
Target Start/End: Complemental strand, 54069508 - 54069469
Alignment:
Q  202 ttaaattgtttttgtatatgctataagttgcttttataag 241  Q
    |||||||||||||||||||||||||| ||| |||||||||    
T  54069508 ttaaattgtttttgtatatgctataatttgtttttataag 54069469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 373
Target Start/End: Complemental strand, 2977934 - 2977896
Alignment:
Q  335 cttatgccagtagataagctcaaataagttaatccaaac 373  Q
    ||||||||| ||||| |||||||||||||||||||||||    
T  2977934 cttatgccactagatcagctcaaataagttaatccaaac 2977896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 374
Target Start/End: Complemental strand, 18512472 - 18512434
Alignment:
Q  336 ttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||||| ||||||||||||||||||||||||||| |||||    
T  18512472 ttatgtcagtagataagctcaaataagttaatcgaaaca 18512434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 374
Target Start/End: Original strand, 18815124 - 18815174
Alignment:
Q  324 gtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||||| ||||||||||| ||||| ||||||||||||||  ||||||||||    
T  18815124 gtctcacaaaacttatgctagtaggtaagctcaaataagccaatccaaaca 18815174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 160
Target Start/End: Original strand, 20108910 - 20108944
Alignment:
Q  126 tatttggataaacaacttatttgcagcttatagca 160  Q
    |||||||||||||||||| ||||||||||||||||    
T  20108910 tatttggataaacaacttttttgcagcttatagca 20108944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 374
Target Start/End: Original strand, 24193645 - 24193683
Alignment:
Q  336 ttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||||||||| |||||||||||||||||| ||||||||||    
T  24193645 ttatgccaggagataagctcaaataagtcaatccaaaca 24193683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 363
Target Start/End: Complemental strand, 25904255 - 25904153
Alignment:
Q  261 aaaataaggcgaaaaaatcttgtgcaaattgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaata 360  Q
    ||||||||  ||||||| ||| || ||| || |||||| |||||||||||| ||  |||||  |||||| |||| ||||| || | ||||||||||||||    
T  25904255 aaaataagctgaaaaaagcttatgaaaaatggcataagctgttttcataagctctcccaaacagtctcacaaaatttatgtcattggataagctcaaata 25904156  T
Q  361 agt 363  Q
    |||    
T  25904155 agt 25904153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 211 - 281
Target Start/End: Complemental strand, 39691225 - 39691155
Alignment:
Q  211 ttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatctt 281  Q
    ||||||||||||||||||||| |||||||||| |||| | ||| |||  |||||||||  ||||||| |||    
T  39691225 ttttgtatatgctataagttgtttttataagctatattgaagaacttacgaaaataagttgaaaaaaactt 39691155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 160
Target Start/End: Original strand, 44248739 - 44248773
Alignment:
Q  126 tatttggataaacaacttatttgcagcttatagca 160  Q
    ||||||||||||||||| |||||||||||||||||    
T  44248739 tatttggataaacaactaatttgcagcttatagca 44248773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 374
Target Start/End: Complemental strand, 46187866 - 46187828
Alignment:
Q  336 ttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  46187866 ttatgccagtagataagctcaaataagatcatccaaaca 46187828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 171
Target Start/End: Original strand, 3155484 - 3155529
Alignment:
Q  126 tatttggataaacaacttatttgcagcttatagcagaagcacttat 171  Q
    |||||||||||||||||||| |||||||||||| | |||| |||||    
T  3155484 tatttggataaacaacttatctgcagcttatagtacaagcgcttat 3155529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 165
Target Start/End: Original strand, 4212815 - 4212852
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagcagaagc 165  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  4212815 tttggataaacaacttattttcagcttatagcacaagc 4212852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 156
Target Start/End: Original strand, 22030091 - 22030120
Alignment:
Q  127 atttggataaacaacttatttgcagcttat 156  Q
    ||||||||||||||||||||||||||||||    
T  22030091 atttggataaacaacttatttgcagcttat 22030120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 374
Target Start/End: Complemental strand, 27123356 - 27123271
Alignment:
Q  290 tgtcataagttgttttcataagttcaaccaaaatgtctcaaaaa-acttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||||||||||||||| |||||| ||   ||||  |||||| ||  |||||||| |||  |||||||||||||||||||||||||||    
T  27123356 tgtcataagttgtttccataagctctctcaaacagtctcacaagtacttatgctagtttataagctcaaataagttaatccaaaca 27123271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 165
Target Start/End: Complemental strand, 27330222 - 27330185
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagcagaagc 165  Q
    ||||||||||||||||||||| ||||||||||| ||||    
T  27330222 tttggataaacaacttatttgtagcttatagcacaagc 27330185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 31076477 - 31076432
Alignment:
Q  202 ttaaattgtttttgtatatgctataagttgcttttataagcaatat 247  Q
    ||||| |||||||||||||||||||| ||| |||||||||| ||||    
T  31076477 ttaaactgtttttgtatatgctataaattgtttttataagctatat 31076432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 374
Target Start/End: Original strand, 41512741 - 41512790
Alignment:
Q  325 tctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||||| |||||||| |||| ||||||  ||||||||||||||||||||||    
T  41512741 tctcacaaaacttaagccattagatacactcaaataagttaatccaaaca 41512790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 165
Target Start/End: Original strand, 44797765 - 44797802
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagcagaagc 165  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  44797765 tttggataaacaacttatttgcaacttatagcacaagc 44797802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 157
Target Start/End: Complemental strand, 50662919 - 50662890
Alignment:
Q  128 tttggataaacaacttatttgcagcttata 157  Q
    ||||||||||||||||||||||||||||||    
T  50662919 tttggataaacaacttatttgcagcttata 50662890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 344 - 384
Target Start/End: Complemental strand, 17975286 - 17975246
Alignment:
Q  344 gtagataagctcaaataagttaatccaaacaaaccttatgt 384  Q
    |||||||||||||||||||| ||||||||||  ||||||||    
T  17975286 gtagataagctcaaataagtcaatccaaacagcccttatgt 17975246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 25885758 - 25885802
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagcagaagcacttatg 172  Q
    |||||||||||||||||||||||||||| |||  || ||||||||    
T  25885758 tttggataaacaacttatttgcagcttacagcgcaaacacttatg 25885802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 29126221 - 29126181
Alignment:
Q  335 cttatgccagtagataagctcaaataagttaatccaaacaa 375  Q
    |||||||| |||||||||||||||||||  |||||||||||    
T  29126221 cttatgccggtagataagctcaaataagccaatccaaacaa 29126181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 273 - 341
Target Start/End: Complemental strand, 30668387 - 30668320
Alignment:
Q  273 aaaaatcttgtgcaaattgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgc 341  Q
    ||||| ||| || ||| ||||||||| |||||||| ||||||  |||||| ||||||||||||||||||    
T  30668387 aaaaagcttatgaaaagtgtcataagctgttttcacaagttct-ccaaaaagtctcaaaaaacttatgc 30668320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 160
Target Start/End: Original strand, 43505831 - 43505863
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagca 160  Q
    ||||||||||||||||||||||| |||||||||    
T  43505831 tttggataaacaacttatttgcaacttatagca 43505863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 44138441 - 44138485
Alignment:
Q  127 atttggataaacaacttatttgcagcttatagcagaagcacttat 171  Q
    ||||||||||||| |||||||||||||| ||| | ||||||||||    
T  44138441 atttggataaacagcttatttgcagcttttagtacaagcacttat 44138485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 314
Target Start/End: Original strand, 45622303 - 45622331
Alignment:
Q  286 aaattgtcataagttgttttcataagttc 314  Q
    |||||||||||||||||||||||||||||    
T  45622303 aaattgtcataagttgttttcataagttc 45622331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 302 - 362
Target Start/End: Complemental strand, 49004033 - 49003973
Alignment:
Q  302 ttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataag 362  Q
    |||||||||||||   ||||  |||||| |||||||| || ||||||||||||||||||||    
T  49004033 ttttcataagttctctcaaatagtctcacaaaacttaagctagtagataagctcaaataag 49003973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 3e-27; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 220 - 374
Target Start/End: Original strand, 26202025 - 26202179
Alignment:
Q  220 tgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttgttttcataagttcaacca 319  Q
    |||||||||||| |||||||||  |||| ||||| |||  |||||||||  ||||||| ||| || |||||||||||||||||| |||||| ||| | ||    
T  26202025 tgctataagttgtttttataagatatattggagaacttatgaaaataagttgaaaaaagcttatgaaaattgtcataagttgttctcataaattctagca 26202124  T
Q  320 aaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||   ||||| |||||||||| ||| ||||||| |||||||||||||||||||||    
T  26202125 aagaatctcacaaaacttatgtcagcagataagttcaaataagttaatccaaaca 26202179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 204 - 354
Target Start/End: Complemental strand, 43279616 - 43279466
Alignment:
Q  204 aaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttgtt 303  Q
    |||||||||||||||  ||||||||||| |||||||||| |||| ||||| |||| |||||||||  ||||||| ||| || ||||||||||||| ||||    
T  43279616 aaattgtttttgtat--gctataagttgtttttataagctatattggagaacttgtgaaaataagttgaaaaaagcttatgaaaattgtcataagctgtt 43279519  T
Q  304 ttcataagt--tcaaccaaaatgtctcaaaaaacttatgccagtagataagct 354  Q
    ||||||| |  ||  |||||  |||||| ||||||||||| ||||||||||||    
T  43279518 ttcataaattctctcccaaacagtctcacaaaacttatgctagtagataagct 43279466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 196 - 361
Target Start/End: Complemental strand, 15757756 - 15757590
Alignment:
Q  196 ataaaattaaattgttttt-gtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtca 294  Q
    ||||| ||||||||||||| |||||||||||||||||  ||||||||| |||   |||| | |  |||||||||  ||||||| ||| || |||||||||    
T  15757756 ataaagttaaattgttttttgtatatgctataagttgtatttataagctatacaagagaacgtatgaaaataagctgaaaaaagcttctgaaaattgtca 15757657  T
Q  295 taagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataa 361  Q
    ||||  |||||||||| |||  ||||   |||||| |||||||||||||||| ||||||||||||||    
T  15757656 taagcagttttcataaattctcccaagcagtctcacaaaacttatgccagtaaataagctcaaataa 15757590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 279 - 375
Target Start/End: Original strand, 30331807 - 30331903
Alignment:
Q  279 cttgtgcaaattgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaacaa 375  Q
    |||||| ||||||||||||| | |||||||||||||  |||||  |||||| |||||||||| ||||||||||||| |||||||| |||||||||||    
T  30331807 cttgtgaaaattgtcataaggttttttcataagttctcccaaacagtctcacaaaacttatgtcagtagataagctgaaataagtcaatccaaacaa 30331903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 202 - 360
Target Start/End: Original strand, 32592566 - 32592723
Alignment:
Q  202 ttaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttg 301  Q
    |||||||||||| ||||| ||||||||||| ||||||||||||||| ||||| |||  |||||||||  || |||| ||| || |||||||| |||| |     
T  32592566 ttaaattgtttt-gtatacgctataagttgtttttataagcaatattggagaacttatgaaaataagttgagaaaagcttatgaaaattgtcgtaagcta 32592664  T
Q  302 ttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaata 360  Q
    |||||||||||||  |||||  | |||  |||||||||||||  ||||||||| |||||    
T  32592665 ttttcataagttctcccaaatagactcccaaaacttatgccatcagataagcttaaata 32592723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 210 - 374
Target Start/End: Original strand, 20952342 - 20952506
Alignment:
Q  210 tttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttgttttcata 309  Q
    ||||| |||||||||||||||| |||||| ||| |||| ||||| |||  |||||||||  |||||||  |  || |||||| |||||  ||||||||||    
T  20952342 tttttttatatgctataagttgtttttattagctatattggagaacttatgaaaataagttgaaaaaagttaatgaaaattggcataaactgttttcata 20952441  T
Q  310 agttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||||    |||  |||| | ||||||| |||||||| |||||||||||||||| ||||||||||    
T  20952442 agttctcttaaatagtctaacaaaacttttgccagtatataagctcaaataagtcaatccaaaca 20952506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 374
Target Start/End: Original strand, 15305711 - 15305825
Alignment:
Q  260 gaaaataaggcgaaaaaatcttgtgcaaattgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaat 359  Q
    |||||||||  ||||||| ||| || |||||| ||||||||||| ||| |||||| ||||||  || ||| |||||||||| || |||||||||||||||    
T  15305711 gaaaataagttgaaaaaaacttatgaaaattgccataagttgttgtcaaaagttctaccaaacagtttcacaaaacttatgtcaatagataagctcaaat 15305810  T
Q  360 aagttaatccaaaca 374  Q
    |||  ||||||||||    
T  15305811 aagccaatccaaaca 15305825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 293 - 374
Target Start/End: Original strand, 27317449 - 27317530
Alignment:
Q  293 cataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||||||||||||||||||||||   ||||  |||||| |||||||||| | |||||||||||||||||||| ||||||||||    
T  27317449 cataagttgttttcataagttctctcaaacagtctcataaaacttatgtcggtagataagctcaaataagtcaatccaaaca 27317530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 196 - 354
Target Start/End: Original strand, 18066101 - 18066259
Alignment:
Q  196 ataaaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcat 295  Q
    ||||| ||||||||||||  |||| |||||||| || ||| |||||| || | ||||| ||| ||||||||||| ||||| | ||| ||   | ||||||    
T  18066101 ataaagttaaattgttttcatataagctataagctgttttcataagctatcttggagaacttaagaaaataaggtgaaaatagcttatgagcaatgtcat 18066200  T
Q  296 aagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagct 354  Q
    ||| ||||||||||||||  || |||  || ||| |||||||||| |||||||||||||    
T  18066201 aagctgttttcataagttgtacaaaacagtttcacaaaacttatgtcagtagataagct 18066259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 196 - 358
Target Start/End: Original strand, 41851508 - 41851670
Alignment:
Q  196 ataaaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcat 295  Q
    ||||| |||||||||||||||||||||||||||||| ||| | |||| || | |||||  ||  |||| ||||  || |||| ||| || ||| ||||||    
T  41851508 ataaagttaaattgtttttgtatatgctataagttgttttcagaagctatcttggagaatttatgaaattaagctgagaaaagcttatgaaaagtgtcat 41851607  T
Q  296 aagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaa 358  Q
    ||||||||| ||||| |||  ||||   |||||| ||||||| || || ||||||||||||||    
T  41851608 aagttgtttccataaattctcccaatcagtctcacaaaacttttgtcaatagataagctcaaa 41851670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 290 - 372
Target Start/End: Original strand, 42419860 - 42419942
Alignment:
Q  290 tgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaa 372  Q
    ||||||||| ||||||| |||||||  |||||  ||||||||||||||||| ||| |||||| ||||||||||| ||||||||    
T  42419860 tgtcataagctgttttcgtaagttctcccaaacagtctcaaaaaacttatgtcagaagataaactcaaataagtcaatccaaa 42419942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 290 - 374
Target Start/End: Original strand, 449914 - 449998
Alignment:
Q  290 tgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||||||||| |||||||| |||| |  |||||   ||||| ||||||||||| ||||||||||||||||||||||||| ||||||    
T  449914 tgtcataagctgttttcaaaagtcctcccaaacaatctcataaaacttatgctagtagataagctcaaataagttaatgcaaaca 449998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 288 - 374
Target Start/End: Original strand, 2142719 - 2142805
Alignment:
Q  288 attgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||||||| || ||||||||||||||||  |||||  |||||| |||||||||||  |||||||| ||||||||||| || |||||||    
T  2142719 attgtcacaacttgttttcataagttctcccaaacagtctcataaaacttatgcatgtagataaactcaaataagtcaaaccaaaca 2142805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 202 - 300
Target Start/End: Complemental strand, 39073780 - 39073682
Alignment:
Q  202 ttaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagtt 300  Q
    ||||||||||||||||||||||||||||   |||||||||| |||| ||||| || | |||||||||  |||  || ||| || |||||||||||||||    
T  39073780 ttaaattgtttttgtatatgctataagtaatttttataagctatattggagaactagtgaaaataagttgaacgaaacttatgaaaattgtcataagtt 39073682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 196 - 361
Target Start/End: Original strand, 1625873 - 1626038
Alignment:
Q  196 ataaaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcat 295  Q
    ||||| |||||||||||| ||||| | ||||||||| ||| |||||| || | ||||| |||  |||||| ||  ||||| ||||| || | ||||||||    
T  1625873 ataaagttaaattgttttcgtataagttataagttgttttcataagctatcttggagaacttacgaaaatcagctgaaaacatcttatgaacattgtcat 1625972  T
Q  296 aagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataa 361  Q
    ||| |  ||||||||||||   ||||  |||| | |||||||||| |||  |||||||||||||||    
T  1625973 aagctactttcataagttctctcaaatagtcttacaaaacttatgtcaggggataagctcaaataa 1626038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 290 - 374
Target Start/End: Original strand, 4606992 - 4607076
Alignment:
Q  290 tgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||||||||||||||||| ||||||  |||||  |||||| |||||||||    |||||||||||||||||||  ||||||||||    
T  4606992 tgtcataagttgttttcacaagttctcccaaatagtctcacaaaacttatattggtagataagctcaaataagccaatccaaaca 4607076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 196 - 284
Target Start/End: Complemental strand, 12464570 - 12464482
Alignment:
Q  196 ataaaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtg 284  Q
    ||||| ||||||||||||||||||||||||||| |  ||| |||||| || | ||||| |||| |||||||||  ||||||| ||||||    
T  12464570 ataaagttaaattgtttttgtatatgctataagctattttcataagctatcttggagaacttgtgaaaataagctgaaaaaagcttgtg 12464482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 18179050 - 18179106
Alignment:
Q  324 gtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaacaaacctt 380  Q
    |||||| ||||||||||  ||||||||||||||||||||| |||||||||| |||||    
T  18179050 gtctcacaaaacttatgttagtagataagctcaaataagtcaatccaaacagacctt 18179106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 26626758 - 26626802
Alignment:
Q  127 atttggataaacaacttatttgcagcttatagcagaagcacttat 171  Q
    |||||||||||||||||||||||||||||||||| |||| |||||    
T  26626758 atttggataaacaacttatttgcagcttatagcataagctcttat 26626802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 290 - 362
Target Start/End: Complemental strand, 42659214 - 42659142
Alignment:
Q  290 tgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataag 362  Q
    ||||||||| |||||||| || |||  |||||  |||||| |||||||||||||||| |||||||||||||||    
T  42659214 tgtcataagctgttttcaaaacttctcccaaacagtctcacaaaacttatgccagtaaataagctcaaataag 42659142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 335 - 374
Target Start/End: Complemental strand, 15370281 - 15370242
Alignment:
Q  335 cttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  15370281 cttatgccagtagataagctcaaataagtcaatccaaaca 15370242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 272 - 374
Target Start/End: Complemental strand, 23974514 - 23974412
Alignment:
Q  272 aaaaaatcttgtgcaaattgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaa 371  Q
    |||||| |||||| ||||||||||||| |||||||||||||||  | |||   |||||  || || ||| |||||||||| | ||||||||| |||||||    
T  23974514 aaaaaaacttgtgaaaattgtcataagctgttttcataagttctccaaaacaatctcactaatctcatgtcagtagataaacccaaataagtcaatccaa 23974415  T
Q  372 aca 374  Q
    |||    
T  23974414 aca 23974412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 298 - 367
Target Start/End: Original strand, 21828037 - 21828106
Alignment:
Q  298 gttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaat 367  Q
    |||||||||| ||||||  | |||  |||||| |||||||||||||||||||||| ||||||||| ||||    
T  21828037 gttgttttcaaaagttcttctaaacagtctcacaaaacttatgccagtagataaggtcaaataagctaat 21828106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 126 - 171
Target Start/End: Complemental strand, 27695786 - 27695741
Alignment:
Q  126 tatttggataaacaacttatttgcagcttatagcagaagcacttat 171  Q
    ||||||||||||||||||||||| ||||||||||| || |||||||    
T  27695786 tatttggataaacaacttatttgtagcttatagcacaaacacttat 27695741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 202 - 375
Target Start/End: Complemental strand, 41812181 - 41812010
Alignment:
Q  202 ttaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttg 301  Q
    ||||||||||||||||||||||| ||| || ||| | |||| || | ||| | ||| || |||||||  ||||||| ||| || ||| ||||||||| ||    
T  41812181 ttaaattgtttttgtatatgctacaagatg-tttcaaaagctatcttggaaaactt-aggaaataagttgaaaaaagcttatgaaaaatgtcataagctg 41812084  T
Q  302 ttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaacaa 375  Q
    |||||| ||||||  |||||  | ||||  |||||| || | | |||||||||||||||||  |||||||||||    
T  41812083 ttttcaaaagttctcccaaacagcctcactaaacttttgactgcagataagctcaaataagccaatccaaacaa 41812010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 1633743 - 1633707
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagcagaag 164  Q
    |||||||||||| ||||||||||||||||||||||||    
T  1633743 tttggataaacagcttatttgcagcttatagcagaag 1633707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 372
Target Start/End: Original strand, 9174916 - 9174964
Alignment:
Q  324 gtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaa 372  Q
    |||||| | ||||||||||| ||||||||||||||||||| ||||||||    
T  9174916 gtctcacataacttatgccaatagataagctcaaataagtaaatccaaa 9174964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 362
Target Start/End: Complemental strand, 29628733 - 29628673
Alignment:
Q  302 ttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataag 362  Q
    |||| ||||||||  ||| | ||||||| |||||||||| |||||||||||||||||||||    
T  29628733 tttttataagttcttccagactgtctcacaaaacttatgacagtagataagctcaaataag 29628673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 374
Target Start/End: Complemental strand, 39659600 - 39659428
Alignment:
Q  202 ttaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttg 301  Q
    ||||||||||||||| |||| ||||| ||| |||||||||| ||||  |||| |||  ||| |||||| || |||| |||    || |||||||||| ||    
T  39659600 ttaaattgtttttgtctatgttataacttgtttttataagctatattagagaacttatgaagataaggtgacaaaagcttagaaaatttgtcataagctg 39659501  T
Q  302 ttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||||| |||||||   || |  | ||||  ||||||||| ||||||||||||||||  |||  ||||||||||    
T  39659500 ttttcgtaagttctctcagacagcctcacgaaacttatgtcagtagataagctcaagcaagccaatccaaaca 39659428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 160
Target Start/End: Original strand, 40835437 - 40835469
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagca 160  Q
    |||||||||||||||||||||||||||||||||    
T  40835437 tttggataaacaacttatttgcagcttatagca 40835469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 43036513 - 43036557
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagcagaagcacttatg 172  Q
    |||||||||||||||||||||| |||||||||| || ||||||||    
T  43036513 tttggataaacaacttatttgccgcttatagcataaccacttatg 43036557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 375
Target Start/End: Original strand, 3312178 - 3312229
Alignment:
Q  324 gtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaacaa 375  Q
    |||||| |||||||| | |||||||||||||||||||||  |||||||||||    
T  3312178 gtctcacaaaacttacgtcagtagataagctcaaataagccaatccaaacaa 3312229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 171
Target Start/End: Original strand, 43570299 - 43570342
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagcagaagcacttat 171  Q
    ||||| |||||| |||||||||||||||||||| ||||||||||    
T  43570299 tttgggtaaacagcttatttgcagcttatagcacaagcacttat 43570342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 374
Target Start/End: Complemental strand, 2964766 - 2964728
Alignment:
Q  336 ttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||||||| ||||||||| |||||||||||||||||||||    
T  2964766 ttatgccggtagataagttcaaataagttaatccaaaca 2964728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 168
Target Start/End: Original strand, 16451019 - 16451061
Alignment:
Q  126 tatttggataaacaacttatttgcagcttatagcagaagcact 168  Q
    |||||||||||||| ||||||||||||||| |||| |||||||    
T  16451019 tatttggataaacatcttatttgcagcttacagcataagcact 16451061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 374
Target Start/End: Complemental strand, 26143640 - 26143561
Alignment:
Q  293 cataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||||||||||||| |||||||  |||||  |||||||||   ||||| ||||||||||||||||| |||  ||||||||||    
T  26143640 cataagttgttttcgtaagttctcccaaacagtctcaaaat--ttatgtcagtagataagctcaaacaagccaatccaaaca 26143561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 170
Target Start/End: Complemental strand, 26143827 - 26143785
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagcagaagcactta 170  Q
    |||||||||||||||||||||||| ||||| || |||||||||    
T  26143827 tttggataaacaacttatttgcagtttataacacaagcactta 26143785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 277
Target Start/End: Complemental strand, 27695681 - 27695611
Alignment:
Q  207 ttgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaa 277  Q
    ||||||||||||||| |||||| || |||||||||| |||| || || |||| ||||||||| | ||||||    
T  27695681 ttgtttttgtatatgatataagctgtttttataagctatattggggaacttgtgaaaataagccaaaaaaa 27695611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 372
Target Start/End: Complemental strand, 1633462 - 1633421
Alignment:
Q  331 aaaacttatgccagtagataagctcaaataagttaatccaaa 372  Q
    ||||||||||| ||||||||| ||||||||||| ||||||||    
T  1633462 aaaacttatgctagtagataaactcaaataagtaaatccaaa 1633421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 310
Target Start/End: Complemental strand, 5745873 - 5745768
Alignment:
Q  205 aattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttgttt 304  Q
    |||||||||| |||||||||||||||  || ||||||| ||||  |||  |||  |||||| ||  | ||||| ||| || ||||||||||||| |||||    
T  5745873 aattgtttttttatatgctataagttatttctataagctatatttgaggacttaggaaaattagttggaaaaagcttatgaaaattgtcataagctgttt 5745774  T
Q  305 tcataa 310  Q
    ||||||    
T  5745773 tcataa 5745768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 374
Target Start/End: Complemental strand, 6772489 - 6772452
Alignment:
Q  337 tatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||||| |||||||||||||||||||| ||||||||||    
T  6772489 tatgcctgtagataagctcaaataagtcaatccaaaca 6772452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 157
Target Start/End: Complemental strand, 7043909 - 7043880
Alignment:
Q  128 tttggataaacaacttatttgcagcttata 157  Q
    ||||||||||||||||||||||||||||||    
T  7043909 tttggataaacaacttatttgcagcttata 7043880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 297
Target Start/End: Original strand, 12194933 - 12195026
Alignment:
Q  205 aattgtttttg-tatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataa 297  Q
    ||||||||||| |||||| |||| |||| || ||||||  |||| ||||| |||| |||||||||  ||||||| ||| || ||||||||||||    
T  12194933 aattgtttttggtatatgttataggttgtttatataagttatattggagaacttgtgaaaataagttgaaaaaagcttatgaaaattgtcataa 12195026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 372
Target Start/End: Complemental strand, 28803488 - 28803451
Alignment:
Q  335 cttatgccagtagataagctcaaataagttaatccaaa 372  Q
    |||||||| |||||||||||||||||||| ||||||||    
T  28803488 cttatgccggtagataagctcaaataagtcaatccaaa 28803451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 157
Target Start/End: Original strand, 41449791 - 41449820
Alignment:
Q  128 tttggataaacaacttatttgcagcttata 157  Q
    ||||||||||||||||||||||||||||||    
T  41449791 tttggataaacaacttatttgcagcttata 41449820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 171
Target Start/End: Original strand, 41851406 - 41851451
Alignment:
Q  126 tatttggataaacaacttatttgcagcttatagcagaagcacttat 171  Q
    |||||||||||||| |||||||||||| ||||||| |||| |||||    
T  41851406 tatttggataaacatcttatttgcagcatatagcacaagcgcttat 41851451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 160
Target Start/End: Original strand, 2416196 - 2416228
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagca 160  Q
    |||||||||||||||||||| ||||||||||||    
T  2416196 tttggataaacaacttattttcagcttatagca 2416228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 344 - 384
Target Start/End: Complemental strand, 3078557 - 3078517
Alignment:
Q  344 gtagataagctcaaataagttaatccaaacaaaccttatgt 384  Q
    |||||||||||||||||||| ||||||||||  ||||||||    
T  3078557 gtagataagctcaaataagtcaatccaaacagcccttatgt 3078517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 156
Target Start/End: Original strand, 9174697 - 9174725
Alignment:
Q  128 tttggataaacaacttatttgcagcttat 156  Q
    |||||||||||||||||||||||||||||    
T  9174697 tttggataaacaacttatttgcagcttat 9174725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 334 - 374
Target Start/End: Original strand, 9886416 - 9886456
Alignment:
Q  334 acttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||||||||||||||||||  ||||||||||| |||||||||    
T  9886416 acttatgccagtagataaattcaaataagttgatccaaaca 9886456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 132 - 160
Target Start/End: Complemental strand, 27317304 - 27317276
Alignment:
Q  132 gataaacaacttatttgcagcttatagca 160  Q
    |||||||||||||||||||||||||||||    
T  27317304 gataaacaacttatttgcagcttatagca 27317276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 28206143 - 28206183
Alignment:
Q  131 ggataaacaacttatttgcagcttatagcagaagcacttat 171  Q
    ||||||||||||| |||||||||||||||| | ||||||||    
T  28206143 ggataaacaacttgtttgcagcttatagcaaatgcacttat 28206183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 32592463 - 32592503
Alignment:
Q  131 ggataaacaacttatttgcagcttatagcagaagcacttat 171  Q
    |||||||||||||||||| ||||||||||| || |||||||    
T  32592463 ggataaacaacttatttgtagcttatagcacaaacacttat 32592503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 334 - 374
Target Start/End: Original strand, 33942017 - 33942057
Alignment:
Q  334 acttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||||||||||||||||| ||||||||||  ||||||||||    
T  33942017 acttatgccagtagataacctcaaataagccaatccaaaca 33942057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 160
Target Start/End: Complemental strand, 39659705 - 39659673
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagca 160  Q
    |||||||||||||||||||||||||||| ||||    
T  39659705 tttggataaacaacttatttgcagcttagagca 39659673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 160
Target Start/End: Original strand, 40279084 - 40279116
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagca 160  Q
    ||||||||||||||||||||| |||||||||||    
T  40279084 tttggataaacaacttatttgtagcttatagca 40279116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 160
Target Start/End: Complemental strand, 41516906 - 41516874
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagca 160  Q
    |||||||||||||||||||||||| ||||||||    
T  41516906 tttggataaacaacttatttgcaggttatagca 41516874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 160
Target Start/End: Complemental strand, 41812271 - 41812239
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagca 160  Q
    |||||||||||||||||||||||| ||||||||    
T  41812271 tttggataaacaacttatttgcagtttatagca 41812239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 41880690 - 41880646
Alignment:
Q  128 tttggataaacaactta-tttgcagcttatagcagaagcacttat 171  Q
    ||||||||||||||||| |||||||||||||||| |||| |||||    
T  41880690 tttggataaacaacttactttgcagcttatagcacaagcgcttat 41880646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 286 - 374
Target Start/End: Original strand, 4163216 - 4163304
Alignment:
Q  286 aaattgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||||||||||||||||||||||| ||||   | ||  |||||  ||||||||||||||||||||||||||||||||  ||||||||||    
T  4163216 aaattgtcataagttgttttcataggttctcacgaacagtctcgtaaaacttatgccagtagataagctcaaataagccaatccaaaca 4163304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 286 - 374
Target Start/End: Original strand, 4224837 - 4224925
Alignment:
Q  286 aaattgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||||||||||||||||||||||| ||||   | ||  |||||  ||||||||||||||||||||||||||||||||  ||||||||||    
T  4224837 aaattgtcataagttgttttcataggttctcacgaacagtctcgtaaaacttatgccagtagataagctcaaataagccaatccaaaca 4224925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 292 - 372
Target Start/End: Complemental strand, 26559241 - 26559160
Alignment:
Q  292 tcataagttgttttcataagttcaaccaaaatgtctcaaaaaa-cttatgccagtagataagctcaaataagttaatccaaa 372  Q
    |||||||||||||||||||||||  |||||  |||||| |||  ||||||||||||| ||| ||||||||||||||||||||    
T  26559241 tcataagttgttttcataagttcttccaaacagtctcacaaatgcttatgccagtaggtaaactcaaataagttaatccaaa 26559160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 205 - 374
Target Start/End: Original strand, 6536597 - 6536763
Alignment:
Q  205 aattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcataagttgttt 304  Q
    ||||||||||||||||||||||||||| ||||| |||| |||| |||||  ||  |||||||||  ||||||| ||| || ||||||   |||| || ||    
T  6536597 aattgtttttgtatatgctataagttgtttttagaagctatattggagaatttatgaaaataagttgaaaaaagcttatgaaaattgctgtaagctg-tt 6536695  T
Q  305 tcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    | |||| |||  |||||  |  ||| |||||||||| |||||| ||| ||||||||| ||||||||||||    
T  6536696 tgataaattctcccaaacag--tcacaaaacttatgtcagtaggtaaactcaaataatttaatccaaaca 6536763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 272 - 374
Target Start/End: Original strand, 31623599 - 31623701
Alignment:
Q  272 aaaaaatcttgtgcaaattgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaa 371  Q
    |||||| |||||| ||||||||||||| | |||||| ||||||  |||||    ||||||||||||| ||||||||||||  |||||||||| ||| |||    
T  31623599 aaaaaagcttgtgaaaattgtcataagctattttcagaagttctcccaaaccacctcaaaaaacttaggccagtagataaattcaaataagtcaattcaa 31623698  T
Q  372 aca 374  Q
    |||    
T  31623699 aca 31623701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 286 - 362
Target Start/End: Original strand, 30926582 - 30926658
Alignment:
Q  286 aaattgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataag 362  Q
    ||||||||||||| |||||||||||||||  |||||  ||||||  ||| ||||||||| | |||||||||||||||    
T  30926582 aaattgtcataagctgttttcataagttcttccaaacagtctcatcaaatttatgccagaaaataagctcaaataag 30926658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 374
Target Start/End: Original strand, 848026 - 848139
Alignment:
Q  260 gaaaataaggcgaaaaaatcttgtgcaaattgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaat 359  Q
    |||||||||  ||||||| |||  | ||| |||||||||  ||||| ||||||||  |||||  |||||| ||||||||||| | |||||||||||||||    
T  848026 gaaaataagctgaaaaaagcttaagaaaaatgtcataagcagtttttataagttcttccaaacagtctcacaaaacttatgcta-tagataagctcaaat 848124  T
Q  360 aagttaatccaaaca 374  Q
    |||  ||||||||||    
T  848125 aaggcaatccaaaca 848139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 290 - 375
Target Start/End: Complemental strand, 9559542 - 9559459
Alignment:
Q  290 tgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaacaa 375  Q
    |||||||||||||||||||||||||  |||||  |||||  |||| |||||||| ||||||||| ||| ||||  |||||||||||    
T  9559542 tgtcataagttgttttcataagttctcccaaatagtctc--aaaatttatgccaatagataagcgcaactaagccaatccaaacaa 9559459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 160
Target Start/End: Complemental strand, 10645518 - 10645484
Alignment:
Q  126 tatttggataaacaacttatttgcagcttatagca 160  Q
    |||||||||||||||||||||||||||||||||||    
T  10645518 tatttggataaacaacttatttgcagcttatagca 10645484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 253
Target Start/End: Complemental strand, 11784124 - 11784070
Alignment:
Q  199 aaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggaga 253  Q
    |||||||||||||||||||||||||||||| || ||| |||||| |||| |||||    
T  11784124 aaattaaattgtttttgtatatgctataagctgttttcataagctatattggaga 11784070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 337 - 374
Target Start/End: Complemental strand, 9202941 - 9202904
Alignment:
Q  337 tatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  9202941 tatgccagtagataagctcaaataagtcaatccaaaca 9202904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 325 - 374
Target Start/End: Complemental strand, 21405122 - 21405073
Alignment:
Q  325 tctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||||| |||||||||| ||||| |||||||||||||||| ||||||||||    
T  21405122 tctcacaaaacttatgtcagtatataagctcaaataagtcaatccaaaca 21405073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 196 - 240
Target Start/End: Complemental strand, 6909969 - 6909925
Alignment:
Q  196 ataaaattaaattgtttttgtatatgctataagttgcttttataa 240  Q
    ||||| |||||||||||||||||||||||||||||| ||| ||||    
T  6909969 ataaagttaaattgtttttgtatatgctataagttgttttcataa 6909925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 290 - 374
Target Start/End: Complemental strand, 34404729 - 34404645
Alignment:
Q  290 tgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||||||||| | |||||||||||||  |||||   || || |||||||||| |||| ||||| ||||||||||| ||||||||||    
T  34404729 tgtcataagatattttcataagttctcccaaagactcacacaaaacttatgtcagttgataaactcaaataagtaaatccaaaca 34404645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 374
Target Start/End: Complemental strand, 835223 - 835180
Alignment:
Q  331 aaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||||||||||| ||||||||||||||||||||  ||||||||||    
T  835223 aaaacttatgctagtagataagctcaaataaggcaatccaaaca 835180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 171
Target Start/End: Original strand, 6538390 - 6538433
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagcagaagcacttat 171  Q
    |||||||||| | |||||||||||||||||||| ||||||||||    
T  6538390 tttggataaatagcttatttgcagcttatagcacaagcacttat 6538433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 202 - 253
Target Start/End: Original strand, 6538491 - 6538542
Alignment:
Q  202 ttaaattgtttttgtatatgctataagttgcttttataagcaatatcggaga 253  Q
    ||||||||||| |||||||||||||||||| ||||||| || |||| |||||    
T  6538491 ttaaattgtttatgtatatgctataagttgtttttataggctatattggaga 6538542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 160
Target Start/End: Original strand, 9632785 - 9632816
Alignment:
Q  129 ttggataaacaacttatttgcagcttatagca 160  Q
    ||||||||||||||||||||||||||||||||    
T  9632785 ttggataaacaacttatttgcagcttatagca 9632816  T

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Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 10645387 - 10645304
Alignment:
Q  291 gtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    |||| |||||||||||||||||||  |||||  |||| | |||||||||| || ||||||| ||||||| ||  ||||||||||    
T  10645387 gtcaaaagttgttttcataagttctcccaaacagtcttacaaaacttatgtcattagataacctcaaattagccaatccaaaca 10645304  T

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Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 307
Target Start/End: Complemental strand, 34430558 - 34430447
Alignment:
Q  196 ataaaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcat 295  Q
    ||||||| |||||||||||||||||| |||||| || ||| |||||| || | |||||  ||  |||||||||  ||||||| ||| ||  || ||||||    
T  34430558 ataaaataaaattgtttttgtatatgttataaggtgttttcataagctatcttggagaagttatgaaaataagctgaaaaaagcttatgataaatgtcat 34430459  T
Q  296 aagttgttttca 307  Q
    ||| ||||||||    
T  34430458 aagctgttttca 34430447  T

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Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 374
Target Start/End: Complemental strand, 2460155 - 2460070
Alignment:
Q  290 tgtcataagttgttttcataagttcaaccaaaatgtctcaaaaa-acttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||||||||||||||| |||||| ||   ||||  |||||| ||  |||||||| |||  |||||||||||||||||||||||||||    
T  2460155 tgtcataagttgtttccataagctctctcaaacagtctcacaagtacttatgctagtttataagctcaaataagttaatccaaaca 2460070  T

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Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 313
Target Start/End: Original strand, 2735042 - 2735159
Alignment:
Q  196 ataaaattaaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaattgtcat 295  Q
    ||||| ||||||| ||||||||||  ||||||| || ||| ||||||||| | | | | |||  ||||||||| |||||| | ||| || ||| ||||||    
T  2735042 ataaagttaaattatttttgtataatctataagctgttttcataagcaatcttgaacaacttatgaaaataagccgaaaacagcttatgaaaaatgtcat 2735141  T
Q  296 aagttgttttcataagtt 313  Q
    |||  |||||||||||||    
T  2735142 aagccgttttcataagtt 2735159  T

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Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 372
Target Start/End: Original strand, 12111079 - 12111116
Alignment:
Q  335 cttatgccagtagataagctcaaataagttaatccaaa 372  Q
    ||||||| ||||||||||||||||||||| ||||||||    
T  12111079 cttatgctagtagataagctcaaataagtcaatccaaa 12111116  T

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Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 347
Target Start/End: Complemental strand, 20368184 - 20368127
Alignment:
Q  290 tgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtag 347  Q
    |||||||||||||||||||||||||  |||||  |||| | |||||||||| ||||||    
T  20368184 tgtcataagttgttttcataagttctcccaaatagtcttacaaaacttatgtcagtag 20368127  T

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Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 374
Target Start/End: Complemental strand, 20861698 - 20861617
Alignment:
Q  294 ataagttgttttcataagttcaaccaaaatgtctcaaaaa-acttatgccagtagataagctcaaataagttaatccaaaca 374  Q
    ||||| |||||||||||| ||  |||||| |||||  | | |||||||||||||| ||||||||||||||  ||||||||||    
T  20861698 ataagatgttttcataagctctcccaaaaagtctcgcatatacttatgccagtaggtaagctcaaataagacaatccaaaca 20861617  T

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Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 165
Target Start/End: Original strand, 35069439 - 35069472
Alignment:
Q  132 gataaacaacttatttgcagcttatagcagaagc 165  Q
    ||||||||||||||||||||||||||||| ||||    
T  35069439 gataaacaacttatttgcagcttatagcacaagc 35069472  T

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Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 415283 - 415323
Alignment:
Q  202 ttaaattgtttttgtatatgctataagttgcttttataagc 242  Q
    |||||||||||| ||||| ||||||||||| ||||||||||    
T  415283 ttaaattgttttcgtataagctataagttgtttttataagc 415323  T

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Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 345 - 373
Target Start/End: Complemental strand, 738489 - 738461
Alignment:
Q  345 tagataagctcaaataagttaatccaaac 373  Q
    |||||||||||||||||||||||||||||    
T  738489 tagataagctcaaataagttaatccaaac 738461  T

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Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 201 - 241
Target Start/End: Original strand, 8201211 - 8201251
Alignment:
Q  201 attaaattgtttttgtatatgctataagttgcttttataag 241  Q
    |||||||||||||||| ||| |||||||||| |||||||||    
T  8201211 attaaattgtttttgtgtatcctataagttgtttttataag 8201251  T

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Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 160
Target Start/End: Original strand, 24626168 - 24626200
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagca 160  Q
    |||||||||||||||||||| ||||||||||||    
T  24626168 tttggataaacaacttatttacagcttatagca 24626200  T

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Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 24626274 - 24626314
Alignment:
Q  202 ttaaattgtttttgtatatgctataagttgcttttataagc 242  Q
    ||||||||||||||||||| |||||||||| ||| ||||||    
T  24626274 ttaaattgtttttgtatattctataagttgttttcataagc 24626314  T

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Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 290 - 354
Target Start/End: Original strand, 30536570 - 30536634
Alignment:
Q  290 tgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagct 354  Q
    ||||||||| | ||||||||||| |  |||||  |||||| |||||||| |||||||||||||||    
T  30536570 tgtcataagctattttcataagtcctcccaaacagtctcacaaaacttacgccagtagataagct 30536634  T

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Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 290 - 381
Target Start/End: Original strand, 31624324 - 31624418
Alignment:
Q  290 tgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaac---ttatgccagtagataagctcaaataagttaatccaaacaaacctta 381  Q
    |||||| || ||||||||||| ||| ||||||  |||||  |||||   ||||| ||||| |||||||||||||||  |||||||||| ||||||    
T  31624324 tgtcatgagctgttttcataaattctaccaaacagtctctcaaaacagcttatgtcagtatataagctcaaataagccaatccaaacagacctta 31624418  T

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Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 342 - 374
Target Start/End: Complemental strand, 31776223 - 31776191
Alignment:
Q  342 cagtagataagctcaaataagttaatccaaaca 374  Q
    |||||||||||||||||||||| ||||||||||    
T  31776223 cagtagataagctcaaataagtcaatccaaaca 31776191  T

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Target: scaffold0018 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 157980 - 158024
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagcagaagcacttatg 172  Q
    |||||||||||| |||||||||||||||||||| || ||||||||    
T  157980 tttggataaacagcttatttgcagcttatagcacaaacacttatg 158024  T

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Target: scaffold0050 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 160
Target Start/End: Original strand, 58477 - 58509
Alignment:
Q  128 tttggataaacaacttatttgcagcttatagca 160  Q
    |||||||||||||||||||||||||||| ||||    
T  58477 tttggataaacaacttatttgcagcttagagca 58509  T

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