View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19530_high_30 (Length: 475)

Name: NF19530_high_30
Description: NF19530
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19530_high_30
NF19530_high_30
[»] chr4 (70 HSPs)
chr4 (138-449)||(43443878-43444189)
chr4 (141-449)||(43435684-43435992)
chr4 (141-442)||(43427186-43427487)
chr4 (1-120)||(47416737-47416856)
chr4 (1-115)||(9528995-9529109)
chr4 (1-109)||(2115705-2115813)
chr4 (1-120)||(53616768-53616887)
chr4 (1-109)||(9283775-9283883)
chr4 (1-120)||(50766626-50766747)
chr4 (1-102)||(34024553-34024654)
chr4 (3-120)||(43444246-43444363)
chr4 (1-120)||(1531759-1531879)
chr4 (1-120)||(10389870-10389989)
chr4 (1-104)||(20569121-20569224)
chr4 (1-102)||(38706827-38706928)
chr4 (1-109)||(9645666-9645774)
chr4 (1-109)||(43154138-43154245)
chr4 (1-101)||(35965091-35965192)
chr4 (1-120)||(25273728-25273852)
chr4 (1-102)||(51317856-51317958)
chr4 (1-102)||(6972681-6972781)
chr4 (1-120)||(31381788-31381907)
chr4 (1-88)||(56194484-56194571)
chr4 (3-87)||(37188711-37188795)
chr4 (1-120)||(4643709-4643829)
chr4 (3-120)||(10359665-10359783)
chr4 (1-102)||(21090023-21090125)
chr4 (1-120)||(868010-868136)
chr4 (1-101)||(27593955-27594054)
chr4 (9-88)||(5333656-5333734)
chr4 (49-115)||(44947261-44947327)
chr4 (9-118)||(18139038-18139146)
chr4 (1-102)||(35261059-35261164)
chr4 (9-118)||(49126251-49126359)
chr4 (1-88)||(12265340-12265428)
chr4 (9-83)||(5333584-5333658)
chr4 (37-137)||(3338816-3338917)
chr4 (1-51)||(8009476-8009526)
chr4 (185-395)||(43422655-43422865)
chr4 (4-52)||(49680458-49680506)
chr4 (1-42)||(29965565-29965606)
chr4 (55-120)||(50179624-50179689)
chr4 (3-83)||(1008185-1008265)
chr4 (1-49)||(49072874-49072922)
chr4 (1-102)||(2624368-2624470)
chr4 (5-47)||(14183729-14183771)
chr4 (1-69)||(35351277-35351345)
chr4 (35-102)||(1931854-1931921)
chr4 (1-51)||(32952863-32952913)
chr4 (1-46)||(21405440-21405485)
chr4 (3-36)||(52978744-52978777)
chr4 (4-88)||(53810893-53810980)
chr4 (13-86)||(21231603-21231678)
chr4 (1-41)||(46991247-46991287)
chr4 (3-66)||(21554927-21554990)
chr4 (6-87)||(22300711-22300794)
chr4 (4-88)||(22558621-22558709)
chr4 (9-87)||(52098044-52098123)
chr4 (3-49)||(23329094-23329140)
chr4 (5-88)||(35348171-35348256)
chr4 (10-82)||(36184335-36184409)
chr4 (253-323)||(43438358-43438428)
chr4 (3-36)||(29120519-29120552)
chr4 (3-88)||(36161579-36161664)
chr4 (3-60)||(9713801-9713860)
chr4 (3-35)||(26091070-26091102)
chr4 (3-31)||(27651872-27651900)
chr4 (3-43)||(31891445-31891485)
chr4 (3-31)||(52944236-52944264)
chr4 (3-87)||(54021727-54021814)
[»] scaffold0252 (1 HSPs)
scaffold0252 (141-449)||(21147-21455)
[»] chr6 (32 HSPs)
chr6 (1-120)||(25064076-25064195)
chr6 (1-120)||(8496806-8496925)
chr6 (1-120)||(12652781-12652900)
chr6 (1-102)||(7881220-7881321)
chr6 (1-102)||(23947434-23947535)
chr6 (1-102)||(33740695-33740796)
chr6 (1-120)||(17334617-17334735)
chr6 (1-102)||(7876162-7876263)
chr6 (1-96)||(17237401-17237496)
chr6 (3-115)||(4984697-4984808)
chr6 (1-115)||(33109680-33109794)
chr6 (1-107)||(8028235-8028341)
chr6 (1-107)||(8196524-8196629)
chr6 (3-102)||(10228539-10228637)
chr6 (1-101)||(4088319-4088420)
chr6 (1-88)||(16419031-16419118)
chr6 (1-83)||(4468437-4468519)
chr6 (1-115)||(12165687-12165801)
chr6 (1-102)||(33543735-33543838)
chr6 (11-88)||(28635249-28635326)
chr6 (1-63)||(5582769-5582831)
chr6 (3-88)||(9508835-9508919)
chr6 (9-61)||(8266535-8266587)
chr6 (1-93)||(34489116-34489211)
chr6 (3-88)||(1523254-1523339)
chr6 (18-88)||(23217124-23217194)
chr6 (3-43)||(13436705-13436745)
chr6 (9-51)||(25398476-25398518)
chr6 (4-88)||(12170341-12170428)
chr6 (3-43)||(28981070-28981110)
chr6 (3-93)||(30776507-30776599)
chr6 (1-45)||(35001506-35001550)
[»] chr8 (46 HSPs)
chr8 (1-120)||(2655717-2655836)
chr8 (1-120)||(9619475-9619594)
chr8 (1-120)||(9498719-9498837)
chr8 (1-115)||(4808817-4808931)
chr8 (1-120)||(11725530-11725649)
chr8 (1-120)||(14907041-14907160)
chr8 (3-137)||(34611635-34611769)
chr8 (1-120)||(43890242-43890361)
chr8 (1-102)||(44100049-44100150)
chr8 (1-120)||(11196740-11196857)
chr8 (1-109)||(17949106-17949214)
chr8 (1-97)||(42448145-42448241)
chr8 (1-115)||(11464025-11464137)
chr8 (1-120)||(44577884-44578003)
chr8 (1-120)||(28239680-28239801)
chr8 (3-102)||(9072583-9072682)
chr8 (1-95)||(19876085-19876179)
chr8 (1-115)||(32724606-32724721)
chr8 (1-102)||(33342303-33342405)
chr8 (1-102)||(33895948-33896048)
chr8 (1-105)||(35580320-35580425)
chr8 (1-95)||(15597283-15597378)
chr8 (3-120)||(27747231-27747348)
chr8 (16-87)||(29777110-29777181)
chr8 (14-109)||(12173362-12173455)
chr8 (2-100)||(12184156-12184251)
chr8 (14-109)||(12417790-12417883)
chr8 (2-100)||(12428584-12428679)
chr8 (1-102)||(15046758-15046861)
chr8 (9-76)||(16794185-16794252)
chr8 (1-83)||(37565996-37566079)
chr8 (1-95)||(24853555-24853650)
chr8 (3-87)||(14545056-14545144)
chr8 (4-88)||(31013726-31013813)
chr8 (4-87)||(37971140-37971226)
chr8 (3-69)||(14585565-14585634)
chr8 (1-52)||(14912989-14913040)
chr8 (4-88)||(18890861-18890947)
chr8 (1-69)||(33298751-33298823)
chr8 (4-43)||(41896405-41896444)
chr8 (9-51)||(18733938-18733980)
chr8 (3-49)||(25241721-25241767)
chr8 (1-42)||(43192462-43192503)
chr8 (3-43)||(20227440-20227480)
chr8 (7-84)||(23230494-23230575)
chr8 (3-31)||(26469351-26469379)
[»] chr5 (59 HSPs)
chr5 (246-452)||(40185922-40186130)
chr5 (1-120)||(30371568-30371687)
chr5 (1-100)||(10649317-10649416)
chr5 (1-115)||(34881559-34881672)
chr5 (1-115)||(26578098-26578212)
chr5 (1-98)||(21060398-21060495)
chr5 (4-120)||(36344609-36344725)
chr5 (1-88)||(27266977-27267064)
chr5 (1-102)||(7241644-7241745)
chr5 (1-102)||(7246820-7246921)
chr5 (1-102)||(18677583-18677684)
chr5 (1-120)||(28235429-28235548)
chr5 (3-115)||(16981139-16981251)
chr5 (1-105)||(43261934-43262038)
chr5 (1-88)||(781265-781352)
chr5 (1-96)||(35475453-35475548)
chr5 (1-73)||(2057955-2058027)
chr5 (3-115)||(7887056-7887168)
chr5 (1-86)||(7150452-7150537)
chr5 (9-102)||(11767669-11767762)
chr5 (5-102)||(19281065-19281162)
chr5 (1-120)||(42579721-42579843)
chr5 (1-120)||(19259929-19260046)
chr5 (2-102)||(3271526-3271624)
chr5 (1-98)||(20257811-20257908)
chr5 (3-88)||(14211077-14211162)
chr5 (17-120)||(41184578-41184680)
chr5 (6-88)||(11192243-11192324)
chr5 (39-96)||(27751782-27751840)
chr5 (3-88)||(2979469-2979556)
chr5 (1-103)||(6445797-6445899)
chr5 (5-69)||(8088371-8088436)
chr5 (1-69)||(27576466-27576535)
chr5 (3-88)||(28097029-28097113)
chr5 (1-42)||(30298130-30298171)
chr5 (3-88)||(39567140-39567227)
chr5 (1-61)||(42432803-42432863)
chr5 (3-87)||(43148607-43148691)
chr5 (1-82)||(15570791-15570873)
chr5 (1-51)||(42886392-42886442)
chr5 (1-33)||(1696983-1697015)
chr5 (3-103)||(8514796-8514896)
chr5 (1-64)||(3166259-3166322)
chr5 (1-64)||(10148698-10148761)
chr5 (1-88)||(31802591-31802676)
chr5 (7-62)||(38549152-38549207)
chr5 (36-86)||(41418694-41418745)
chr5 (1-51)||(1582238-1582288)
chr5 (1-51)||(1602527-1602577)
chr5 (3-60)||(26878235-26878295)
chr5 (38-88)||(33029726-33029776)
chr5 (3-88)||(7036072-7036160)
chr5 (4-66)||(24229942-24230006)
chr5 (3-36)||(28541069-28541102)
chr5 (10-95)||(42432203-42432287)
chr5 (48-88)||(4953958-4953998)
chr5 (1-69)||(17682836-17682903)
chr5 (1-33)||(27751857-27751889)
chr5 (35-115)||(35676227-35676306)
[»] chr7 (50 HSPs)
chr7 (1-120)||(2843344-2843463)
chr7 (1-120)||(46821855-46821974)
chr7 (1-115)||(46338899-46339013)
chr7 (1-102)||(21266251-21266352)
chr7 (1-109)||(26492217-26492325)
chr7 (1-120)||(32684526-32684645)
chr7 (7-109)||(26583566-26583668)
chr7 (1-115)||(35496292-35496406)
chr7 (1-88)||(23425488-23425575)
chr7 (1-120)||(42311121-42311240)
chr7 (1-88)||(42067177-42067264)
chr7 (1-102)||(1485373-1485474)
chr7 (1-102)||(20116442-20116543)
chr7 (5-102)||(22927991-22928088)
chr7 (1-104)||(35667348-35667451)
chr7 (1-88)||(48207776-48207862)
chr7 (1-94)||(1448946-1449039)
chr7 (1-120)||(31235908-31236029)
chr7 (1-88)||(433809-433896)
chr7 (4-98)||(42408225-42408319)
chr7 (1-102)||(23085380-23085481)
chr7 (1-85)||(3860828-3860912)
chr7 (3-109)||(14627998-14628105)
chr7 (1-88)||(45199148-45199235)
chr7 (1-88)||(6001894-6001982)
chr7 (51-120)||(12539122-12539191)
chr7 (1-120)||(32522043-32522166)
chr7 (3-88)||(20083205-20083289)
chr7 (3-119)||(35261139-35261256)
chr7 (3-88)||(1749300-1749385)
chr7 (37-94)||(17610998-17611055)
chr7 (1-98)||(36143729-36143826)
chr7 (3-43)||(5546277-5546317)
chr7 (3-88)||(19404911-19404998)
chr7 (3-88)||(24351000-24351087)
chr7 (3-88)||(35132798-35132885)
chr7 (61-115)||(6558762-6558817)
chr7 (3-60)||(22742813-22742872)
chr7 (4-87)||(34899764-34899850)
chr7 (9-88)||(1100890-1100969)
chr7 (35-102)||(17499797-17499864)
chr7 (35-102)||(17553350-17553417)
chr7 (3-88)||(5078551-5078637)
chr7 (3-88)||(28476070-28476155)
chr7 (3-58)||(48930657-48930714)
chr7 (1-30)||(7640899-7640928)
chr7 (3-44)||(25067978-25068019)
chr7 (4-88)||(30756976-30757063)
chr7 (3-88)||(37837615-37837702)
chr7 (3-43)||(44311953-44311993)
[»] chr2 (53 HSPs)
chr2 (1-120)||(27249268-27249387)
chr2 (1-120)||(36233850-36233969)
chr2 (1-108)||(30420534-30420641)
chr2 (1-120)||(45128050-45128168)
chr2 (1-98)||(21570525-21570622)
chr2 (1-137)||(7015827-7015962)
chr2 (1-115)||(3270345-3270459)
chr2 (1-102)||(2808587-2808688)
chr2 (1-102)||(6173495-6173596)
chr2 (1-109)||(8971743-8971853)
chr2 (1-120)||(41712882-41713001)
chr2 (1-115)||(3725031-3725145)
chr2 (1-120)||(34598832-34598952)
chr2 (1-115)||(459391-459505)
chr2 (1-120)||(9986462-9986583)
chr2 (1-115)||(40626144-40626258)
chr2 (1-115)||(40660048-40660159)
chr2 (1-95)||(27477025-27477119)
chr2 (3-87)||(4192717-4192801)
chr2 (1-88)||(32913119-32913206)
chr2 (1-102)||(42949577-42949679)
chr2 (1-102)||(32680699-32680799)
chr2 (1-120)||(20047199-20047317)
chr2 (1-86)||(4228011-4228096)
chr2 (1-101)||(39641976-39642076)
chr2 (13-102)||(25086897-25086986)
chr2 (25-120)||(33229129-33229224)
chr2 (1-137)||(27949252-27949387)
chr2 (10-86)||(24587593-24587669)
chr2 (1-52)||(31581836-31581887)
chr2 (1-69)||(26025526-26025595)
chr2 (1-64)||(41430929-41430992)
chr2 (3-88)||(43397277-43397363)
chr2 (3-88)||(3308794-3308881)
chr2 (3-88)||(10237370-10237457)
chr2 (1-84)||(30923591-30923672)
chr2 (4-51)||(8805781-8805828)
chr2 (1-115)||(37614241-37614356)
chr2 (37-138)||(9374702-9374804)
chr2 (1-82)||(17319208-17319287)
chr2 (3-61)||(23933778-23933838)
chr2 (1-51)||(18694961-18695012)
chr2 (9-76)||(32197919-32197986)
chr2 (6-88)||(32448782-32448865)
chr2 (3-77)||(14955389-14955465)
chr2 (1-42)||(22421659-22421700)
chr2 (3-88)||(12648081-12648168)
chr2 (3-88)||(24461294-24461379)
chr2 (70-120)||(31581888-31581938)
chr2 (3-88)||(39285415-39285501)
chr2 (1-102)||(8308036-8308137)
chr2 (9-53)||(13719284-13719328)
chr2 (4-88)||(36943281-36943368)
[»] chr3 (50 HSPs)
chr3 (1-137)||(14464330-14464465)
chr3 (1-120)||(44907516-44907635)
chr3 (5-108)||(12115944-12116047)
chr3 (1-120)||(36905960-36906079)
chr3 (1-120)||(32607306-32607425)
chr3 (1-120)||(25631644-25631763)
chr3 (1-102)||(46934499-46934600)
chr3 (1-108)||(35499318-35499426)
chr3 (7-102)||(4178421-4178516)
chr3 (1-108)||(38440694-38440801)
chr3 (1-120)||(38855154-38855272)
chr3 (1-120)||(39917513-39917632)
chr3 (1-102)||(50611534-50611635)
chr3 (1-88)||(3850572-3850659)
chr3 (4-102)||(49552343-49552441)
chr3 (1-102)||(4172423-4172524)
chr3 (3-115)||(2342336-2342447)
chr3 (1-120)||(25162275-25162393)
chr3 (1-88)||(29503333-29503420)
chr3 (19-115)||(51202384-51202480)
chr3 (1-102)||(37169087-37169189)
chr3 (9-88)||(22802892-22802971)
chr3 (9-102)||(36735277-36735370)
chr3 (1-88)||(46178447-46178535)
chr3 (1-88)||(17237673-17237760)
chr3 (1-77)||(21487993-21488069)
chr3 (1-115)||(31793924-31794037)
chr3 (55-120)||(47980839-47980904)
chr3 (55-120)||(47990126-47990191)
chr3 (55-120)||(47999413-47999478)
chr3 (55-120)||(48008700-48008765)
chr3 (40-86)||(6823553-6823599)
chr3 (7-73)||(42719406-42719472)
chr3 (4-98)||(9797686-9797784)
chr3 (3-87)||(50194440-50194526)
chr3 (17-102)||(19605908-19605993)
chr3 (3-78)||(29249099-29249175)
chr3 (3-88)||(33579713-33579800)
chr3 (4-88)||(54148833-54148920)
chr3 (3-83)||(29921903-29921985)
chr3 (3-83)||(29971056-29971138)
chr3 (1-59)||(6913263-6913321)
chr3 (3-88)||(21289977-21290063)
chr3 (3-88)||(47042208-47042296)
chr3 (4-88)||(21431470-21431556)
chr3 (3-77)||(51303796-51303871)
chr3 (3-102)||(3606616-3606716)
chr3 (3-31)||(7546516-7546544)
chr3 (3-43)||(40957010-40957050)
chr3 (4-36)||(51923629-51923661)
[»] chr1 (51 HSPs)
chr1 (1-109)||(19716014-19716121)
chr1 (1-137)||(50272257-50272392)
chr1 (1-115)||(30878925-30879039)
chr1 (1-109)||(25728076-25728184)
chr1 (1-120)||(35584738-35584857)
chr1 (1-120)||(40646533-40646652)
chr1 (1-115)||(5701107-5701221)
chr1 (1-120)||(18569427-18569546)
chr1 (1-115)||(20266151-20266266)
chr1 (3-108)||(30818464-30818569)
chr1 (1-102)||(51868762-51868863)
chr1 (6-102)||(5324679-5324775)
chr1 (1-120)||(50148217-50148336)
chr1 (1-103)||(9172350-9172452)
chr1 (1-103)||(9180332-9180434)
chr1 (1-102)||(25406401-25406502)
chr1 (1-102)||(51871728-51871828)
chr1 (1-92)||(14545393-14545484)
chr1 (1-96)||(28035008-28035103)
chr1 (1-120)||(40881130-40881249)
chr1 (1-102)||(45426179-45426281)
chr1 (1-93)||(7997659-7997751)
chr1 (1-120)||(19723179-19723297)
chr1 (3-98)||(33291537-33291633)
chr1 (1-88)||(27872616-27872703)
chr1 (3-88)||(45805928-45806013)
chr1 (1-102)||(7312215-7312316)
chr1 (13-102)||(7342585-7342674)
chr1 (1-102)||(50166216-50166316)
chr1 (1-120)||(38520650-38520770)
chr1 (1-88)||(44637299-44637386)
chr1 (1-120)||(11453780-11453900)
chr1 (1-88)||(3871285-3871373)
chr1 (1-59)||(9919295-9919353)
chr1 (3-83)||(16161685-16161767)
chr1 (9-63)||(39987292-39987346)
chr1 (20-88)||(48365887-48365955)
chr1 (1-44)||(34519054-34519097)
chr1 (5-87)||(34528568-34528650)
chr1 (5-88)||(49626758-49626843)
chr1 (4-88)||(29738793-29738880)
chr1 (1-88)||(41081820-41081909)
chr1 (3-88)||(1742129-1742216)
chr1 (12-98)||(19052460-19052546)
chr1 (3-88)||(31984028-31984116)
chr1 (3-60)||(34413247-34413307)
chr1 (3-60)||(36775873-36775931)
chr1 (3-36)||(48750091-48750124)
chr1 (3-47)||(15492182-15492226)
chr1 (5-88)||(18939170-18939254)
chr1 (1-84)||(39927671-39927755)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-115)||(361913-362025)
[»] scaffold0311 (1 HSPs)
scaffold0311 (1-115)||(8566-8680)
[»] scaffold0495 (1 HSPs)
scaffold0495 (3-102)||(5258-5356)
[»] scaffold0426 (1 HSPs)
scaffold0426 (4-115)||(6185-6295)
[»] scaffold0146 (1 HSPs)
scaffold0146 (1-88)||(16439-16526)
[»] scaffold0888 (1 HSPs)
scaffold0888 (3-78)||(1831-1908)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-47)||(201488-201534)
[»] scaffold0608 (1 HSPs)
scaffold0608 (55-120)||(83-148)
[»] scaffold0264 (1 HSPs)
scaffold0264 (1-102)||(20511-20610)
[»] scaffold0009 (1 HSPs)
scaffold0009 (3-88)||(58236-58323)
[»] scaffold0127 (1 HSPs)
scaffold0127 (7-88)||(15337-15420)
[»] scaffold0113 (1 HSPs)
scaffold0113 (3-63)||(36804-36864)
[»] scaffold0002 (1 HSPs)
scaffold0002 (3-43)||(453851-453891)
[»] scaffold0134 (1 HSPs)
scaffold0134 (17-88)||(17405-17476)
[»] scaffold0049 (1 HSPs)
scaffold0049 (3-88)||(71441-71526)
[»] scaffold0026 (1 HSPs)
scaffold0026 (4-88)||(72021-72108)


Alignment Details
Target: chr4 (Bit Score: 284; Significance: 1e-159; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 138 - 449
Target Start/End: Complemental strand, 43444189 - 43443878
Alignment:
Q  138 attaacccgaatattgttagctttcatatcatcgaatgccttaagtacttcttcaaacctccccgtctcacaaagtccgaaaataagttgactgtaggtg 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  43444189 attaacccgaatattgttagctttcatatcatcgaatgccttaagtgcttcttcaaacctccccgtcttacaaagtccgaaaataagttgactgtaggtg 43444090  T
Q  238 atgctatctggctcgtagccagcatttttcatggtctcgacaatcttttcagcttcatcaaatttcccagcacttgtcaaagacctatgaataccatcat 337  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43444089 atgctatctggctcgtagccatcatttttcatggtctcgacaatcttttcagcttcatcaaatttcccagcacttgtcaaagacctatgaataccatcat 43443990  T
Q  338 agactgccttggaaagagtataccctgatgactcaaatttcttagctaccctgaaaactaaatccaaatttggcttatagcttgcagagatgctctttaa 437  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  43443989 agactgccttggaaagagtataccctgatgactcgaatttcttagctaccctgaaaactaaatccaaattcggcttatcgcttgcagagatgctctttaa 43443890  T
Q  438 aagcatgatgca 449  Q
    |||||| |||||    
T  43443889 aagcataatgca 43443878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 141 - 449
Target Start/End: Complemental strand, 43435992 - 43435684
Alignment:
Q  141 aacccgaatattgttagctttcatatcatcgaatgccttaagtacttcttcaaacctccccgtctcacaaagtccgaaaataagttgactgtaggtgatg 240  Q
    ||||| |||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  43435992 aacccaaatattgttagctttcatatcatcgattaccttaagtgcttcttcaaacctccccgtcttacaaagtccgaaaataagttgactgtaggtgatg 43435893  T
Q  241 ctatctggctcgtagccagcatttttcatggtctcgacaatcttttcagcttcatcaaatttcccagcacttgtcaaagacctatgaataccatcataga 340  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43435892 ctatctggctcgtagccatcatttttcatggtctcgacaatcttttcagcttcatcaaatttcccagcacttgtcaaagacctatgaataccatcataga 43435793  T
Q  341 ctgccttggaaagagtataccctgatgactcaaatttcttagctaccctgaaaactaaatccaaatttggcttatagcttgcagagatgctctttaaaag 440  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  43435792 ctgccttggaaagagtataccctgatgactcgaatttcttagctaccctgaaaactaaatccaaattcggcttatcgcttgcagagatgctctttaaaag 43435693  T
Q  441 catgatgca 449  Q
    ||| |||||    
T  43435692 cataatgca 43435684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 141 - 442
Target Start/End: Complemental strand, 43427487 - 43427186
Alignment:
Q  141 aacccgaatattgttagctttcatatcatcgaatgccttaagtacttcttcaaacctccccgtctcacaaagtccgaaaataagttgactgtaggtgatg 240  Q
    ||||| || |||| |||||| ||||| ||||| | |||||||| ||||||  ||||||| ||||| ||||| ||||||||||||||||||||| ||||||    
T  43427487 aacccaaagattgatagcttgcatatgatcgattaccttaagtgcttctttgaacctcctcgtcttacaaaatccgaaaataagttgactgtatgtgatg 43427388  T
Q  241 ctatctggctcgtagccagcatttttcatggtctcgacaatcttttcagcttcatcaaatttcccagcacttgtcaaagacctatgaataccatcataga 340  Q
     ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  43427387 ttatctggttcgtagccagcatttttcatggtctcgacaatcttttcagcttcatcaaatttcccagcacctgtcaaagacctatgaataccatcataga 43427288  T
Q  341 ctgccttggaaagagtataccctgatgactcaaatttcttagctaccctgaaaactaaatccaaatttggcttatagcttgcagagatgctctttaaaag 440  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||   ||| ||| | ||||||||||||    
T  43427287 ctgccttggaaagagtataccctgttgactcaaatttcttagttaccctgaaaactaaatccaaatctggcttatcctttgtagataggctctttaaaag 43427188  T
Q  441 ca 442  Q
    ||    
T  43427187 ca 43427186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 47416856 - 47416737
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||| |||| |||||||||||    
T  47416856 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaagtcaataattgacccaaaatcacccctcaatgaaga 47416757  T
Q  101 aattgtaagggaaaaactag 120  Q
    ||||||||| ||||| ||||    
T  47416756 aattgtaagagaaaacctag 47416737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 9528995 - 9529109
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||| ||||||    
T  9528995 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagataaagaggggtgatttcaggtcaagaattgacccaaaaccacccctcagtgaaga 9529094  T
Q  101 aattgtaagggaaaa 115  Q
    || |||||| |||||    
T  9529095 aactgtaagagaaaa 9529109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 2115705 - 2115813
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||| ||||||||| |    
T  2115705 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaaaagtgatttcaggtcaataattgacccaaaaccacccctcaatgaata 2115804  T
Q  101 aattgtaag 109  Q
    |||||||||    
T  2115805 aattgtaag 2115813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 53616768 - 53616887
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||  |||| ||||| |||||    
T  53616768 tctatgtgaaaatcacttatttagattgaaataaagagaaaacgatgaagagtggtgatttcaggtcaagaattgacccaaagtcacccctcaacgaaga 53616867  T
Q  101 aattgtaagggaaaaactag 120  Q
    ||||||||| ||||| ||||    
T  53616868 aattgtaagagaaaacctag 53616887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 9283883 - 9283775
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||| ||||||||||||||||| |||||||||||    
T  9283883 tctatgtaaaaatcacttatttagattgaaataaagagaaaacgatgaagaggggtgatttcaggttaagtattgacccaaaaccacccctcaatgaaga 9283784  T
Q  101 aattgtaag 109  Q
    |||||||||    
T  9283783 aattgtaag 9283775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 50766626 - 50766747
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatga--a 98  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||| ||||||||  |    
T  50766626 tctatgtgaaaatcatttatttagattgaaataaagagaaaaagatgaagagggatgatttcagatcaagaattgacccaaaaccacctctcaatgaaga 50766725  T
Q  99 gaaattgtaagggaaaaactag 120  Q
    ||||||||||| ||||| ||||    
T  50766726 gaaattgtaagagaaaacctag 50766747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 34024553 - 34024654
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  34024553 tctatgtgaaaataacttatttagattgaaatagagagaaaaagatgaagaggggtgatttcaggtcaagaattgatccaaaaccacccctcaatgaaga 34024652  T
Q  101 aa 102  Q
    ||    
T  34024653 aa 34024654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 3 - 120
Target Start/End: Complemental strand, 43444363 - 43444246
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaa 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||| |||||||||||||| ||| |||||||||| ||    
T  43444363 tatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagatgggtgatttcagatcaaaaattgacccaaaactacccctcaatgaaggaa 43444264  T
Q  103 ttgtaagggaaaaactag 120  Q
    ||||||| ||||| ||||    
T  43444263 ttgtaagagaaaacctag 43444246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 1531879 - 1531759
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagaga-aaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaag 99  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||| ||||| |||||||||||||||||||||||||||| |||||| ||||||||||    
T  1531879 tctatgtgaaaatcacttatttagattgaaatagagagagaaaagataaagaggggtgatttcaggtcaagaattgacccaataccacccctcaatgaag 1531780  T
Q  100 aaattgtaagggaaaaactag 120  Q
    ||| |||||| ||||| ||||    
T  1531779 aaactgtaagagaaaacctag 1531759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 10389870 - 10389989
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||   |||||||||||||||||||||||||||||||||| |||||||||||    
T  10389870 tctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagatgagtgatttcaggtcaagaattgacccaaaaccacccctcaatgaaga 10389969  T
Q  101 aattgtaagggaaaaactag 120  Q
    || | |||| ||||| ||||    
T  10389970 aactataagagaaaacctag 10389989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 20569224 - 20569121
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||  ||||||||||    
T  20569224 tctatgtgaaaatcatttatttagattgaaataaagagaaaaaaatgaagaggggtgatttcaggttaagaattgacccaaaaccacccatcaatgaaga 20569125  T
Q  101 aatt 104  Q
    ||||    
T  20569124 aatt 20569121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 38706827 - 38706928
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||| || ||||||||||||||||||||||| |||||||||||    
T  38706827 tctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagaagggtgattttagatcaagaattgacccaaaaccacccctcaatgaaga 38706926  T
Q  101 aa 102  Q
    ||    
T  38706927 aa 38706928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 9645666 - 9645774
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||| ||||||||||||||||||||| ||| |||||||||||||| |||||| |||||||||||||||||||||||| ||| |||||||||||    
T  9645666 tctatgtgaaagtcacttatttagattgaaatagagacaaaaagatgaagaggggtgatatcaggtcaagaattgacccaaaacgacccctcaatgaaga 9645765  T
Q  101 aattgtaag 109  Q
    || ||||||    
T  9645766 aactgtaag 9645774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 43154138 - 43154245
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||| |||||||||||||||||||||||| ||||||| | |    
T  43154138 tctatgtgaaaatcacttatttagattgaaatagagagaaaa-gatgaagaggggtgatttcaagtcaagaattgacccaaaaccacctctcaatggata 43154236  T
Q  101 aattgtaag 109  Q
    |||||||||    
T  43154237 aattgtaag 43154245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 35965091 - 35965192
Alignment:
Q  1 tctatgtgaaaa-tcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaag 99  Q
    |||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||    
T  35965091 tctatgtgaaaaatcacttattcagattgaaatagagagaaaaagatgaagagaggtgatttcaggtaaaaaattgacccaaaaccacccctcaatgaag 35965190  T
Q  100 aa 101  Q
    ||    
T  35965191 aa 35965192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 25273852 - 25273728
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaa-----agatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaat 95  Q
    ||||||||||||||||||||||||||||||||| ||||||||     |||||||||| ||||||||||||||||||||||| ||||||||||| ||||||    
T  25273852 tctatgtgaaaatcacttatttagattgaaatagagagaaaagatgaagatgaagaggggtgatttcaggtcaagaattgatccaaaaccacccctcaat 25273753  T
Q  96 gaagaaattgtaagggaaaaactag 120  Q
    | ||||| |||||| ||||| ||||    
T  25273752 ggagaaactgtaagagaaaatctag 25273728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 51317958 - 51317856
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtc-aagaattgacccaaaaccaccgctcaatgaag 99  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||   ||||||||||||| |||||||||||||||| |||| ||||||||||    
T  51317958 tctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagatgagtgatttcaggtcaaagaattgacccaaaatcacccctcaatgaag 51317859  T
Q  100 aaa 102  Q
    |||    
T  51317858 aaa 51317856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 6972781 - 6972681
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||| ||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||    
T  6972781 tctatgtaaaagtcacttatttagattgaaatacagataaaaagatgaagagaggtgatttcagatcaagaattgacccaaaaccacc-cccaatgaaga 6972683  T
Q  101 aa 102  Q
    ||    
T  6972682 aa 6972681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 31381788 - 31381907
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||||||| ||||||| | ||||||||||||||  || |||||||||||||||||||||||||||||||||||  |||| |||||    
T  31381788 tctatgtgaaaatcacttatttaaattgaaaaagagagaaaaagatgagaaggggtgatttcaggtcaagaattgacccaaaaccacccatcaacgaaga 31381887  T
Q  101 aattgtaagggaaaaactag 120  Q
    ||  ||||| ||||| ||||    
T  31381888 aaccgtaagagaaaatctag 31381907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 56194571 - 56194484
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||||   |||||||||||||||||||||||||||||||||    
T  56194571 tctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagaggtttgatttcaggtcaagaattgacccaaaaccacc 56194484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 37188711 - 37188795
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccac 87  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||   ||||||||||||||| |||||||||||||||||    
T  37188711 tatgtgaaaatcacttatttagattgaaatatagagaaaaagatgaagatgagtgatttcaggtcaataattgacccaaaaccac 37188795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 4643829 - 4643709
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga--gaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaa 98  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||  | |||||||||||||||| |||| ||| ||||||||| |||||||||    
T  4643829 tctatgtgaaa-tcacttatttagattgaaatagagagaaaaagatgaagaggggggtgatttcaggtcaaaaattcacctaaaaccacccctcaatgaa 4643731  T
Q  99 gaaattgtaagggaaaaactag 120  Q
    || | |||||| ||||| ||||    
T  4643730 gagactgtaagagaaaacctag 4643709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 3 - 120
Target Start/End: Original strand, 10359665 - 10359783
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaacca-ccgctcaatgaagaa 101  Q
    ||||| |||||||||||||||||| |||||| ||||||||||||||||   |||||||||||||||| |||||||||||||||| || ||||||||||||    
T  10359665 tatgttaaaatcacttatttagatcgaaatagagagaaaaagatgaagttgggtgatttcaggtcaaaaattgacccaaaaccaccccctcaatgaagaa 10359764  T
Q  102 attgtaagggaaaaactag 120  Q
    | || ||| ||||| ||||    
T  10359765 actgaaagagaaaatctag 10359783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 21090125 - 21090023
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaacca-ccgctcaatgaag 99  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||   |||||||||| ||||  ||||||||||||||| || ||||||||||    
T  21090125 tctatgtgaaaatcacttatttatattgaaatagagagaaaaagatgaagatgagtgatttcagatcaaagattgacccaaaaccaccccctcaatgaag 21090026  T
Q  100 aaa 102  Q
    |||    
T  21090025 aaa 21090023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 868136 - 868010
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaat-------aaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctca 93  Q
    ||||||||||||| ||||||||||||||||||       | |||||||||||||||||| |||||||||| ||||||||| |||| ||||||||| ||||    
T  868136 tctatgtgaaaataacttatttagattgaaatttgaaatagagagaaaaagatgaagaggggtgatttcatgtcaagaatcgacctaaaaccacccctca 868037  T
Q  94 atgaagaaattgtaagggaaaaactag 120  Q
    ||||||||| || ||| ||||| ||||    
T  868036 atgaagaaactggaagagaaaacctag 868010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 27593955 - 27594054
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||| || |||||||||||||||||| |||||||||||||||||| |||||||||| ||||| |||||||| |||| ||||  ||||||||||    
T  27593955 tctatgtgaaactcgcttatttagattgaaatatagagaaaaagatgaagag-ggtgatttcatgtcaaaaattgacctaaaatcacccatcaatgaaga 27594053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 5333656 - 5333734
Alignment:
Q  9 aaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||||||||||||| ||||||||| |||||||||||||||||| |||||||||| ||||| ||||||||||||||||||    
T  5333656 aaaatcacttatttatattgaaatagagagaaaaagatgaagag-ggtgatttcatgtcaaaaattgacccaaaaccacc 5333734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 49 - 115
Target Start/End: Complemental strand, 44947327 - 44947261
Alignment:
Q  49 agagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaattgtaagggaaaa 115  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||    
T  44947327 agagaggtgatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaactgtaagagaaaa 44947261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 18139038 - 18139146
Alignment:
Q  9 aaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaattgtaa 108  Q
    ||||||||||||||||||||||||| |||||||| |||||||||  |||||| |||||||| |||| ||| |||| |||| ||||||||| |||||| ||    
T  18139038 aaaatcacttatttagattgaaatagagagaaaatgatgaagaggtgtgattccaggtcaaaaatttacctaaaatcacccctcaatgaa-aaattggaa 18139136  T
Q  109 gggaaaaact 118  Q
    | ||||||||    
T  18139137 gtgaaaaact 18139146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 35261164 - 35261059
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaaga-gaaaaagatgaagagagg----tgatttcaggtcaagaattgacccaaaaccaccgctcaat 95  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||    | |||||||||||| ||||||||||||| |||| ||||||    
T  35261164 tctatgtgaaaatcacttatttagattgcaataaagaggaaaaagatgaagaggggatgattatttcaggtcaaaaattgacccaaaatcacc-ctcaat 35261066  T
Q  96 gaagaaa 102  Q
    |||||||    
T  35261065 gaagaaa 35261059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 49126251 - 49126359
Alignment:
Q  9 aaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaattgtaa 108  Q
    ||||||||||||||||||||||||| |||||||| |||||||||  |||||| |||||||| |||| ||| |||| |||| ||||||||| |||||| ||    
T  49126251 aaaatcacttatttagattgaaatagagagaaaatgatgaagaggtgtgattccaggtcaaaaatttacctaaaatcacccctcaatgaa-aaattggaa 49126349  T
Q  109 gggaaaaact 118  Q
    | ||||||||    
T  49126350 gtgaaaaact 49126359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 12265428 - 12265340
Alignment:
Q  1 tctatgtgaaaa-tcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    |||||||||||| |||||||||||||||||||||  || |||||||||||||| |||||||||||||||| |||||||| |||| ||||    
T  12265428 tctatgtgaaaaatcacttatttagattgaaatagggataaaaagatgaagaggggtgatttcaggtcaaaaattgaccaaaaatcacc 12265340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 5333584 - 5333658
Alignment:
Q  9 aaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaa 83  Q
    ||||||||||||||| ||||||||| |||||||||||||||||   ||||||||||||||| |||||||||||||    
T  5333584 aaaatcacttatttatattgaaatagagagaaaaagatgaagatgtgtgatttcaggtcaaaaattgacccaaaa 5333658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 3338816 - 3338917
Alignment:
Q  37 agaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaattgtaag-ggaaaaactagggccagcttgttgga 135  Q
    |||||||||||||||  | |||||| ||||||| |||||||||||||||||| ||||||||||||| || ||| | ||||||||||| | ||||||||||    
T  3338816 agaaaaagatgaagattgatgattttaggtcaaaaattgacccaaaaccacctctcaatgaagaaactggaagagaaaaaactagggtcggcttgttgga 3338915  T
Q  136 ga 137  Q
    ||    
T  3338916 ga 3338917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 8009476 - 8009526
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga 51  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8009476 tctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaaga 8009526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 185 - 395
Target Start/End: Complemental strand, 43422865 - 43422655
Alignment:
Q  185 cttcttcaaacctccccgtctcacaaagtccgaaaataagttgactgtaggtgatgctatctggctcgtagccagcatttttcatggtctcgacaatctt 284  Q
    ||||||||| ||||  | ||| ||||||||| ||||  ||||||||||| ||  |  |||| || || | |||| ||||| |||| ||||  ||||| ||    
T  43422865 cttcttcaaccctcttcatcttacaaagtccaaaaaccagttgactgtatgtagtattatcaggttcatggccaccatttctcatagtcttaacaatatt 43422766  T
Q  285 ttcagcttcatcaaatttcccagcacttgtcaaagacctatgaataccatcatagactgccttggaaagagtataccctgatgactcaaatttcttagct 384  Q
    ||||||||  |||||||||||  ||||||||||| |||| || || |||||||||| | ||||||  |||||||||||||  || ||| ||||||| |||    
T  43422765 ttcagctttgtcaaatttccccacacttgtcaaacacctgtgtattccatcatagatttccttggtgagagtataccctgcggattcatatttcttggct 43422666  T
Q  385 accctgaaaac 395  Q
    |||| ||||||    
T  43422665 acccggaaaac 43422655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 49680506 - 49680458
Alignment:
Q  4 atgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagag 52  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  49680506 atgtgaaaatcacttatttggattgaaataaagagaaaaagatgaagag 49680458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 29965606 - 29965565
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaa 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  29965606 tctatgtgaaaatcacttatttagattgaaataaagagaaaa 29965565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 55 - 120
Target Start/End: Complemental strand, 50179689 - 50179624
Alignment:
Q  55 gtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaattgtaagggaaaaactag 120  Q
    |||||||||||| ||||||||||||||||||||| ||||||| ||||| |||||| ||||| ||||    
T  50179689 gtgatttcaggttaagaattgacccaaaaccacccctcaatggagaaactgtaagagaaaagctag 50179624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 1008265 - 1008185
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaa 83  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||| |||   ||||||||| |||||  ||||| ||||||    
T  1008265 tatgtgaaaatcacttatttagattaaaatagagagaaaaagatgcagatgagtgatttcaagtcaaatattgatccaaaa 1008185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 49072874 - 49072922
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaa 49  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||||    
T  49072874 tctatgtgaaaatcacttatatagattgaaataaagagaaaaatatgaa 49072922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 2624470 - 2624368
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaata-aagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaag 99  Q
    ||||||||||||||||||||||||||||||||| |  | |||||||||| ||   || |||||||||||| |||  |||||||| |||| |||||| |||    
T  2624470 tctatgtgaaaatcacttatttagattgaaatagactataaaaagatgatgatgagttatttcaggtcaaaaatcaacccaaaatcacccctcaataaag 2624371  T
Q  100 aaa 102  Q
    |||    
T  2624370 aaa 2624368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 14183771 - 14183729
Alignment:
Q  5 tgtgaaaatcacttatttagattgaaataaagagaaaaagatg 47  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  14183771 tgtgaaaatcacttatttagattgaaatagagagaaaaagatg 14183729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 35351277 - 35351345
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaa 69  Q
    |||||||||| |||||||||||| |||||||||||| ||||| ||||||||   |||||||| ||||||    
T  35351277 tctatgtgaatatcacttatttaaattgaaataaagcgaaaaggatgaagatgtgtgatttctggtcaa 35351345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 35 - 102
Target Start/End: Original strand, 1931854 - 1931921
Alignment:
Q  35 agagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaa 102  Q
    |||||||||||||||||   |||||||||||| ||  |||||||| |||||||| |||||||||||||    
T  1931854 agagaaaaagatgaagatgagtgatttcaggttaaatattgacccgaaaccacctctcaatgaagaaa 1931921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 32952863 - 32952913
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga 51  Q
    |||||||||||| ||||||||||  |||||||| |||||||||||||||||    
T  32952863 tctatgtgaaaaacacttatttaatttgaaatagagagaaaaagatgaaga 32952913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 21405485 - 21405440
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagat 46  Q
    ||||||||||||||||||| ||||||||||||| |||| |||||||    
T  21405485 tctatgtgaaaatcacttaattagattgaaatagagaggaaaagat 21405440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 36
Target Start/End: Complemental strand, 52978777 - 52978744
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaag 36  Q
    ||||||||||||||||||||||||||||||||||    
T  52978777 tatgtgaaaatcacttatttagattgaaataaag 52978744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 53810980 - 53810893
Alignment:
Q  4 atgtgaaaatcacttatttagattgaaataaa---gagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    |||||||||||||||||||| ||||||| |||   | |||||||||| |||| |||||||  ||||||| || ||||| |||||||||    
T  53810980 atgtgaaaatcacttatttaaattgaaagaaaagggggaaaaagatgtagaggggtgattataggtcaaaaaatgacctaaaaccacc 53810893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 21231603 - 21231678
Alignment:
Q  13 tcacttatttagattgaaataaagagaaaaa--gatgaagagaggtgatttcaggtcaagaattgacccaaaacca 86  Q
    ||||||||||||| ||||| |||||||||||  |||| ||||||||||||| || |||| || ||||| |||||||    
T  21231603 tcacttatttagaatgaaagaaagagaaaaaaagatggagagaggtgattttagatcaaaaaatgacctaaaacca 21231678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 46991247 - 46991287
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaa 41  Q
    ||||||||||||||||| ||||||||||||||| |||||||    
T  46991247 tctatgtgaaaatcactcatttagattgaaatagagagaaa 46991287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 21554927 - 21554990
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggt 66  Q
    |||||||||||||||||||| || ||||||||| | |||||||| ||||   ||||||||||||    
T  21554927 tatgtgaaaatcacttatttcgaatgaaataaatataaaaagattaagatgcgtgatttcaggt 21554990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 22300794 - 22300711
Alignment:
Q  6 gtgaaaatcacttatttagattgaaa-taaagagaaaaa-gatgaagagaggtgatttcaggtcaagaattgacccaaaaccac 87  Q
    |||||||||||||||||| |||||||  ||||||||||| |||| | || |||||||| ||||||| || ||||| ||||||||    
T  22300794 gtgaaaatcacttatttaaattgaaagaaaagagaaaaaggatgcaaaggggtgattttaggtcaaaaaatgacctaaaaccac 22300711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 22558621 - 22558709
Alignment:
Q  4 atgtgaaaatcacttatttagattgaaataaagag----aaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||||||| |||||||||||||||||| ||| ||    ||||||||| ||||||||||||  | ||||| || ||||| |||||||||    
T  22558621 atgtgaaaaccacttatttagattgaaagaaaaaggggaaaaaagatgtagagaggtgattctatgtcaaaaaatgacctaaaaccacc 22558709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 52098044 - 52098123
Alignment:
Q  9 aaaatcacttatttagattgaaataaagagaaaaagatgaaga-gaggtgatttcaggtcaagaattgacccaaaaccac 87  Q
    |||||||||||||||||||||||||  ||||||| |||||| |  |||||||||||  |||| |||||| | ||||||||    
T  52098044 aaaatcacttatttagattgaaatagggagaaaaggatgaacataaggtgatttcaaatcaaaaattgatctaaaaccac 52098123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 23329140 - 23329094
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaa 49  Q
    ||||||||||||| |||||||| |||||||| ||| |||||||||||    
T  23329140 tatgtgaaaatcagttatttaggttgaaatagagataaaaagatgaa 23329094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 35348256 - 35348171
Alignment:
Q  5 tgtgaaaatcacttatttagattgaaataaa--gagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    |||||||| |||||||||||||||||| |||  |  ||||||||| ||||||||||||  ||||||| || ||||| |||| ||||    
T  35348256 tgtgaaaaccacttatttagattgaaagaaaagggaaaaaagatgtagagaggtgattctaggtcaaaaaatgacctaaaatcacc 35348171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 36184409 - 36184335
Alignment:
Q  10 aaatcacttatttagattgaaat-aaaga-gaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaa 82  Q
    |||||||||||||| |||||||| | |||  |||||||||||||||| |||||| || |||| ||||||||||||    
T  36184409 aaatcacttatttaaattgaaatgagagataaaaaagatgaagagagatgattttagatcaataattgacccaaa 36184335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 323
Target Start/End: Complemental strand, 43438428 - 43438358
Alignment:
Q  253 tagccagcatttttcatggtctcgacaatcttttcagcttcatcaaatttcccagcacttgtcaaagacct 323  Q
    |||||||||||| |||| ||||  ||||| ||||||||||  |||||||||||| |||| |||||| ||||    
T  43438428 tagccagcatttctcatagtcttaacaatattttcagctttttcaaatttcccaacactggtcaaacacct 43438358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 36
Target Start/End: Original strand, 29120519 - 29120552
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaag 36  Q
    |||||||||| |||||||||||||||||||||||    
T  29120519 tatgtgaaaaccacttatttagattgaaataaag 29120552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 36161664 - 36161579
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||| ||||||||||||||||||||||| |||  | |||| ||| |||  |||||||  ||||||| || ||||| |||||||||    
T  36161664 tatgtaaaaatcacttatttagattgaaagaaatgggaaaaaatgcagatgggtgattctaggtcaaaaaatgacctaaaaccacc 36161579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 9713860 - 9713801
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagag--aaaaagatgaagagaggtgatt 60  Q
    |||||| |||||||||||||||||||||| |||| |  ||||||||| ||||| ||||||    
T  9713860 tatgtggaaatcacttatttagattgaaagaaaggggaaaaaagatgtagagaagtgatt 9713801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 26091070 - 26091102
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaa 35  Q
    |||||||||| ||||||||||||||||||||||    
T  26091070 tatgtgaaaaccacttatttagattgaaataaa 26091102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 31
Target Start/End: Complemental strand, 27651900 - 27651872
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaa 31  Q
    |||||||||||||||||||||||||||||    
T  27651900 tatgtgaaaatcacttatttagattgaaa 27651872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 31891445 - 31891485
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagagaaaaa 43  Q
    ||||| ||||||||||||||||||||||| |||| ||||||    
T  31891445 tatgtaaaaatcacttatttagattgaaagaaagggaaaaa 31891485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 31
Target Start/End: Complemental strand, 52944264 - 52944236
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaa 31  Q
    |||||||||||||||||||||||||||||    
T  52944264 tatgtgaaaatcacttatttagattgaaa 52944236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 54021814 - 54021727
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaa-taaagag--aaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccac 87  Q
    |||||||||| ||||||||||||||||||  ||||||  ||||||||| |||| | |||||| | ||||| || ||||| ||||||||    
T  54021814 tatgtgaaaaccacttatttagattgaaagaaaagaggaaaaaagatgtagagggatgattttatgtcaaaaaatgacctaaaaccac 54021727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0252 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: scaffold0252
Description:

Target: scaffold0252; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 141 - 449
Target Start/End: Complemental strand, 21455 - 21147
Alignment:
Q  141 aacccgaatattgttagctttcatatcatcgaatgccttaagtacttcttcaaacctccccgtctcacaaagtccgaaaataagttgactgtaggtgatg 240  Q
    ||||| |||||||||||||| ||||||||| | | |||||||| ||||||||||||| ||||| |  |||||||||||||||||||||||||||||||||    
T  21455 aacccaaatattgttagcttgcatatcatcaattaccttaagtgcttcttcaaacctacccgttttgcaaagtccgaaaataagttgactgtaggtgatg 21356  T
Q  241 ctatctggctcgtagccagcatttttcatggtctcgacaatcttttcagcttcatcaaatttcccagcacttgtcaaagacctatgaataccatcataga 340  Q
     |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  21355 ttatctgactcgtagccagcatttttcatggtctcgacaatcttttcagcttcatcaaatttccgagcacttgtcaaagacctatgaataccatcataga 21256  T
Q  341 ctgccttggaaagagtataccctgatgactcaaatttcttagctaccctgaaaactaaatccaaatttggcttatagcttgcagagatgctctttaaaag 440  Q
    |||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||   |||||| |||||||||  |||||||||||||    
T  21255 ctgccttggaaagagtataccctgtttactcgaatttcttagctaccctgaaaactaaatccaaatccagcttatcgcttgcagatgtgctctttaaaag 21156  T
Q  441 catgatgca 449  Q
    ||| |||||    
T  21155 cataatgca 21147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 108; Significance: 5e-54; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 25064195 - 25064076
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  25064195 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacccctcaatgaaga 25064096  T
Q  101 aattgtaagggaaaaactag 120  Q
    ||||||||| ||||| ||||    
T  25064095 aattgtaagagaaaacctag 25064076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 8496925 - 8496806
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||    
T  8496925 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtcaagaattgactcaaaaccacccctcaatgaaga 8496826  T
Q  101 aattgtaagggaaaaactag 120  Q
    ||||||||| ||||| ||||    
T  8496825 aattgtaagagaaaacctag 8496806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 12652900 - 12652781
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  12652900 tctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagaggggtgatttcaggtcaagaattgacccaaaaccacccctcaatgaaga 12652801  T
Q  101 aattgtaagggaaaaactag 120  Q
    || ||| || ||||| ||||    
T  12652800 aactgtgagagaaaacctag 12652781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 7881220 - 7881321
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||| ||||||||||| |||||||||||    
T  7881220 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaaaggtgatttcaagtcaataattgatccaaaaccacccctcaatgaaga 7881319  T
Q  101 aa 102  Q
    ||    
T  7881320 aa 7881321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 23947434 - 23947535
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||    
T  23947434 tctatgtgaaaatcacttatttagattgaaatagagagaaaacgatgaagatgggtgatttcaggtcaagaattgacccaaaaccacccctcaatgaaga 23947533  T
Q  101 aa 102  Q
    ||    
T  23947534 aa 23947535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 33740695 - 33740796
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||| ||||||||| |||||||||||    
T  33740695 tctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagaggggtgattttaggtcaagaattgaccaaaaaccacccctcaatgaaga 33740794  T
Q  101 aa 102  Q
    ||    
T  33740795 aa 33740796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 17334735 - 17334617
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||| |||||||| || ||||||||||| |||||||||||    
T  17334735 tctatgtgaaaatcacttatttagattgaaataaacagaaaaagatgaagattggtgatttcagatcaagaatcgatccaaaaccacc-ctcaatgaaga 17334637  T
Q  101 aattgtaagggaaaaactag 120  Q
    ||||||||| ||||| ||||    
T  17334636 aattgtaagagaaaatctag 17334617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 7876162 - 7876263
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||| |||||| ||||||||||| |||||||||||    
T  7876162 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagatgggtgattttaggtcaataattgatccaaaaccacccctcaatgaaga 7876261  T
Q  101 aa 102  Q
    ||    
T  7876262 aa 7876263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 17237401 - 17237496
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatg 96  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||    
T  17237401 tctatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagaggggtgatttcatgtcaagaattgacccaaaaccacccctcaatg 17237496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 4984697 - 4984808
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaa 102  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||   |||||||||||||||||||||||||||||||||| ||||||| |||||    
T  4984697 tatgtgaaaatcacttatttagattgaaatagagagaaaa-gatgaagatgagtgatttcaggtcaagaattgacccaaaaccacccctcaatggagaaa 4984795  T
Q  103 ttgtaagggaaaa 115  Q
     |||||| |||||    
T  4984796 ctgtaagagaaaa 4984808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 33109794 - 33109680
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |  ||||| ||||||| ||||||||||||||||||  ||||||||||    
T  33109794 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagatggacgattttaggtcaaaaattgacccaaaaccacccgtcaatgaaga 33109695  T
Q  101 aattgtaagggaaaa 115  Q
    || || ||| |||||    
T  33109694 aactggaagagaaaa 33109680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 8028235 - 8028341
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||| | ||||||| ||| |||| ||||||||||||| |||| |||||||||||    
T  8028235 tctatgtgaaaatcacttatttagattgaaacagagagaaaaagatgaagtggggtgattccagatcaataattgacccaaaatcacctctcaatgaaga 8028334  T
Q  101 aattgta 107  Q
    || ||||    
T  8028335 aactgta 8028341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 8196524 - 8196629
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| |  |||||||| |||||||||| ||| ||||||||||| |||||||||||    
T  8196524 tctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaatacgggtgattttaggtcaagaactgatccaaaaccacc-ctcaatgaaga 8196622  T
Q  101 aattgta 107  Q
    || ||||    
T  8196623 aactgta 8196629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 10228637 - 10228539
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaa 102  Q
    ||||| ||| |||||||||||||||||| || ||||| |||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||    
T  10228637 tatgtaaaagtcacttatttagattgaagtagagagagaaagatgaagaggggtgatttcaggtcaagaattgacccaaaaccacc-cccaatgaagaaa 10228539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 4088420 - 4088319
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaaga-tgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaag 99  Q
    |||||||||||||||||||||||||||| |||| ||| ||||| | ||||||  ||||||||||||||||||||||||||||||||||| |||||| |||    
T  4088420 tctatgtgaaaatcacttatttagattgtaatagagataaaaaaaatgaagatgggtgatttcaggtcaagaattgacccaaaaccacccctcaataaag 4088321  T
Q  100 aa 101  Q
    ||    
T  4088320 aa 4088319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 16419118 - 16419031
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||  |||||||| |||| |||||||||| ||||||||||    
T  16419118 tctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagatgggtgattttaggttaagaattgactcaaaaccacc 16419031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 4468519 - 4468437
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaa 83  Q
    ||||| ||||||||||||||||||||||||||| |||||| ||||||||||| ||||| |||| |||||||||||||||||||    
T  4468519 tctatatgaaaatcacttatttagattgaaatagagagaacaagatgaagaggggtgacttcatgtcaagaattgacccaaaa 4468437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 12165801 - 12165687
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    |||||||||||||||||||||||||||||||||   | ||||||||||||||  ||||||||||||||| |||||||||||||  ||  |||||||||||    
T  12165801 tctatgtgaaaatcacttatttagattgaaataggcataaaaagatgaagaggagtgatttcaggtcaataattgacccaaaataactcctcaatgaaga 12165702  T
Q  101 aattgtaagggaaaa 115  Q
    || || ||| |||||    
T  12165701 aactggaagagaaaa 12165687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 33543735 - 33543838
Alignment:
Q  1 tctatgtgaaaa-tcacttatttagattgaaataaagagaaaaagatg-aagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaa 98  Q
    |||||||||||| | ||||||||||||||||||| ||||||||||||| ||||   ||||||||||||||| || |||| |||||||||| ||||| |||    
T  33543735 tctatgtgaaaaattacttatttagattgaaatatagagaaaaagatgaaagatgagtgatttcaggtcaaaaactgactcaaaaccacccctcaacgaa 33543834  T
Q  99 gaaa 102  Q
    ||||    
T  33543835 gaaa 33543838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 28635249 - 28635326
Alignment:
Q  11 aatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||||||||||| ||||||||||| ||||||| |||||||| | |||||| ||||||| ||||| ||||||| ||||    
T  28635249 aatcacttatttaaattgaaataaaaagaaaaatatgaagagggatgatttgaggtcaaaaattgtcccaaaatcacc 28635326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 5582769 - 5582831
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttca 63  Q
    ||||| ||||||||| ||||||||||| ||||| | |||||||||||||||| ||||||||||    
T  5582769 tctatttgaaaatcatttatttagattaaaatataaagaaaaagatgaagagtggtgatttca 5582831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 9508835 - 9508919
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    |||||||||||||||||||||||||||| |||| ||||||||  |||||  |||||||   |||||| |||||| |||||||||||    
T  9508835 tatgtgaaaatcacttatttagattgaattaaaaagaaaaagtggaagaatggtgattatgggtcaa-aattgatccaaaaccacc 9508919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 8266587 - 8266535
Alignment:
Q  9 aaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgattt 61  Q
    |||||||||||||||||||||| || ||||||||||||||||| | |||||||    
T  8266587 aaaatcacttatttagattgaagtagagagaaaaagatgaagacaagtgattt 8266535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 34489211 - 34489116
Alignment:
Q  1 tctatgtgaaaa-tcacttatttagat--tgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctca 93  Q
    |||||||||||| ||||||||||| ||  |||| || |||||||||||||||||| |||||||| | ||||| |||||| | ||||||||| ||||    
T  34489211 tctatgtgaaaaatcacttatttatatattgaattagagagaaaaagatgaagaggggtgattttaagtcaaaaattgatcaaaaaccacccctca 34489116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 1523339 - 1523254
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaa-taaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    |||||| ||||||||||||||||||||||  ||||||||||| ||| |||| |||||||  ||||||| |||||||| |||| ||||    
T  1523339 tatgtggaaatcacttatttagattgaaagaaaagagaaaaaaatgcagag-ggtgattctaggtcaaaaattgacctaaaatcacc 1523254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 23217124 - 23217194
Alignment:
Q  18 tatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    |||||| ||||||||| |||||||| ||||| || ||||||||||  |||||  |||||||||||||||||    
T  23217124 tatttaaattgaaatagagagaaaatgatgacgaaaggtgatttcgagtcaaatattgacccaaaaccacc 23217194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 13436745 - 13436705
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagagaaaaa 43  Q
    ||||||||||||||||||||| ||||||||| |||||||||    
T  13436745 tatgtgaaaatcacttatttaaattgaaatagagagaaaaa 13436705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 25398518 - 25398476
Alignment:
Q  9 aaaatcacttatttagattgaaataaagagaaaaagatgaaga 51  Q
    ||||||||||||||||||||| | ||||| |||||||||||||    
T  25398518 aaaatcacttatttagattgagacaaagataaaaagatgaaga 25398476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 12170428 - 12170341
Alignment:
Q  4 atgtgaaaatcacttatttagattgaaataaa---gagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||||||| |||||||||||||||||| |||   |  ||||||||| |||| |||||||  ||||||| || ||||| |||||||||    
T  12170428 atgtgaaaaccacttatttagattgaaagaaaaggggaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccacc 12170341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 28981110 - 28981070
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagagaaaaa 43  Q
    |||||| |||||||||||||||||||||| |||| ||||||    
T  28981110 tatgtggaaatcacttatttagattgaaagaaagggaaaaa 28981070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 30776599 - 30776507
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaa-gag-aaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctca 93  Q
    |||||| |||| ||||||||||||||||| ||| ||| ||||| ||| |||| |||||||  ||||||| |||||||| |||| |||| ||||    
T  30776599 tatgtggaaattacttatttagattgaaagaaaggagaaaaaatatgcagaggggtgattctaggtcaaaaattgacctaaaatcacccctca 30776507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 35001550 - 35001506
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaaga 45  Q
    ||||||| ||| ||||||||||||||| ||||| |||||||||||    
T  35001550 tctatgtaaaagtcacttatttagattaaaatagagagaaaaaga 35001506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 104; Significance: 1e-51; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 2655836 - 2655717
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||    
T  2655836 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagatgggtgattgcaggtcaagaattgacccaaaaccaccgctcaatgaaga 2655737  T
Q  101 aattgtaagggaaaaactag 120  Q
    ||||||||| ||||||||||    
T  2655736 aattgtaagagaaaaactag 2655717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 9619475 - 9619594
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  9619475 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtcaagaattgacccaaaaccacccctcaatgaaga 9619574  T
Q  101 aattgtaagggaaaaactag 120  Q
    ||||||||| ||||| ||||    
T  9619575 aattgtaagagaaaatctag 9619594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 9498719 - 9498837
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||    
T  9498719 tctatgtgaaaatcacttatttagattgaaataaagataaaaagatgaagaggggtgatttcaggt-aagaattgacccaaaaccacccctcaatgaaga 9498817  T
Q  101 aattgtaagggaaaaactag 120  Q
    ||||||||| ||||| ||||    
T  9498818 aattgtaagagaaaacctag 9498837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 4808931 - 4808817
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||    
T  4808931 tctatgtgaaaatcacttatttacattgaaataaagaaaaaaagatgaagaggggtaatttcaggtcaagaattgacccaaaaccacccctcaatgaaga 4808832  T
Q  101 aattgtaagggaaaa 115  Q
    ||||||||| |||||    
T  4808831 aattgtaagagaaaa 4808817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 11725649 - 11725530
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  11725649 tctatgtgaaaaacacttatttagattgaaataaagagaaaaagacgaagaggggtgatttcaggtcaagaattgacccaaaaccacccctcaatgaaga 11725550  T
Q  101 aattgtaagggaaaaactag 120  Q
    || || ||| ||||| ||||    
T  11725549 aactgaaagagaaaatctag 11725530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 14907041 - 14907160
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||| || | |||||||||||    
T  14907041 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagatgggtgatttcaggtcaagaattgatccaaaatcatccctcaatgaaga 14907140  T
Q  101 aattgtaagggaaaaactag 120  Q
    ||||||||| ||||| ||||    
T  14907141 aattgtaagagaaaacctag 14907160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 3 - 137
Target Start/End: Complemental strand, 34611769 - 34611635
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaa 102  Q
    ||||||||||||||||||||||| ||||||| | ||||||| |||||||   |||||||||||||||||||||||||||||||||| ||| |||||||||    
T  34611769 tatgtgaaaatcacttatttagactgaaatagaaagaaaaatatgaagatgagtgatttcaggtcaagaattgacccaaaaccacccctcgatgaagaaa 34611670  T
Q  103 ttgtaagggaaaaactagggccagcttgttggaga 137  Q
     |||||| |||||||||||| ||||||||||||||    
T  34611669 ctgtaagagaaaaactagggtcagcttgttggaga 34611635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 43890242 - 43890361
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| || ||| ||||||||||| |||||||||||    
T  43890242 tctatgtcaaaatcacttatttagattgaattaaagagaaaaagatgaagaggggtgatttcaggtcaaaaaatgatccaaaaccacccctcaatgaaga 43890341  T
Q  101 aattgtaagggaaaaactag 120  Q
    ||||||||| ||||| ||||    
T  43890342 aattgtaagagaaaacctag 43890361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 44100049 - 44100150
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||||||    
T  44100049 tctatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagaggggtgattttaggtcaagaatcgacccaaaaccacccctcaatgaaga 44100148  T
Q  101 aa 102  Q
    ||    
T  44100149 aa 44100150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 11196857 - 11196740
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||  | ||||||||||||||||||||||||||||||||| ||||| |||||    
T  11196857 tctatgtgaaaatcacttatttagattgaaata--gagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaaccacccctcaacgaaga 11196760  T
Q  101 aattgtaagggaaaaactag 120  Q
    || |  ||| ||||||||||    
T  11196759 aactagaagagaaaaactag 11196740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 17949214 - 17949106
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    |||||||||||||| |||||||||||||||||| |||||||||| ||||||| |||||||||||||||| ||||||||||||| ||||  ||||||||||    
T  17949214 tctatgtgaaaatcgcttatttagattgaaatagagagaaaaaggtgaagaggggtgatttcaggtcaataattgacccaaaatcacccatcaatgaaga 17949115  T
Q  101 aattgtaag 109  Q
    || ||||||    
T  17949114 aactgtaag 17949106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 42448145 - 42448241
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatga 97  Q
    ||||| || |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||    
T  42448145 tctatatgtaaatcacttatttagattgaaatagagagaaaaagatgaagaggggtgatttcaggtcaagaattaacccaaaaccacccctcaatga 42448241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 11464137 - 11464025
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||||| | |||||||||||||||| ||  ||||||| ||||||||||||||||||||||||| ||||||||| || ||||||||    
T  11464137 tctatgtgaaaatcacttattcaaattgaaataaagagaagaa--tgaagaggggtgatttcaggtcaagaattgacctaaaaccaccccttaatgaaga 11464040  T
Q  101 aattgtaagggaaaa 115  Q
    ||||||||| |||||    
T  11464039 aattgtaagagaaaa 11464025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 44578003 - 44577884
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    |||||||| |||||||||| ||||||||||||| ||||||||||||||||||  ||||||| ||||||| |||||||||||||||||| |||||||||||    
T  44578003 tctatgtgtaaatcacttagttagattgaaatagagagaaaaagatgaagaggagtgattttaggtcaaaaattgacccaaaaccacccctcaatgaaga 44577904  T
Q  101 aattgtaagggaaaaactag 120  Q
    ||  ||||| ||||| ||||    
T  44577903 aacagtaagagaaaacctag 44577884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 28239801 - 28239680
Alignment:
Q  1 tctatgtgaaaat-cacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaacca-ccgctcaatgaa 98  Q
    ||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| || || |||||||||    
T  28239801 tctatgtgaaaaaacacttatttagattgaaatagagagaaaaagatgaagagaggtgatttcaggtcaaaaattgacccaaaatcaccccctcaatgaa 28239702  T
Q  99 gaaattgtaagggaaaaactag 120  Q
    |||| || ||| ||||| ||||    
T  28239701 gaaaatggaagagaaaacctag 28239680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 9072682 - 9072583
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaa 102  Q
    ||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||||| ||||| |||||||||||||||||| | |||||||||||    
T  9072682 tatgtgaaagtcacttatttaaattgaaatagagagaaaaagatgaagaggggtgatttcaagtcaaaaattgacccaaaaccaccccccaatgaagaaa 9072583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 19876179 - 19876085
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaat 95  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||   || ||||||||||||||||||||||||||||||| ||||||    
T  19876179 tctatgtgaaaatcacttatttagattgaaatattgagaaaaagatgaagatgagtaatttcaggtcaagaattgacccaaaaccacccctcaat 19876085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 32724606 - 32724721
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaa-ttgacccaaaacca-ccgctcaatgaa 98  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||| || |||||||||||||| || ||||||| |    
T  32724606 tctatgtgaaaatcacttatttagattgaaatagagag-aaaagatgaagagaagtgatttcaggtcaataatttgacccaaaaccaccccctcaatgga 32724704  T
Q  99 gaaattgtaagggaaaa 115  Q
    |||| |||||| |||||    
T  32724705 gaaactgtaagagaaaa 32724721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 33342405 - 33342303
Alignment:
Q  1 tctatgtgaaaa-tcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaag 99  Q
    |||||||||||| |||||||||||||||||| || ||| |||| ||||||||| ||||||||||||| || |||||||||||||||||| ||||||||||    
T  33342405 tctatgtgaaaaatcacttatttagattgaattagagaaaaaaggatgaagaggggtgatttcaggttaaaaattgacccaaaaccacccctcaatgaag 33342306  T
Q  100 aaa 102  Q
    |||    
T  33342305 aaa 33342303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 33896048 - 33895948
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||| ||||||||||||||| ||||| |||||||||||||||||| ||||| || || ||||||||||||||||||||||| | |||||||||    
T  33896048 tctatgtgaaagtcacttatttagatttaaatagagagaaaaagatgaagaggggtgactttagatcaagaattgacccaaaaccacc-cccaatgaaga 33895950  T
Q  101 aa 102  Q
    ||    
T  33895949 aa 33895948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 35580425 - 35580320
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaacca-ccgctcaatgaag 99  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||   ||||||| | ||||| |||||||||||||||| || ||||||||||    
T  35580425 tctatgtgaaaatcacttatttaaattgaaatagagagaaaaagatgaagatgagtgattttatgtcaaaaattgacccaaaaccaccctctcaatgaag 35580326  T
Q  100 aaattg 105  Q
    ||||||    
T  35580325 aaattg 35580320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 15597283 - 15597378
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaag-agaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaat 95  Q
    ||||||||||||||||||||||||||||||||  |  |||||||||||||||| |||||||||||||||| |||||||  ||||||||| ||||||    
T  15597283 tctatgtgaaaatcacttatttagattgaaatggactagaaaaagatgaagaggggtgatttcaggtcaaaaattgactgaaaaccacccctcaat 15597378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 3 - 120
Target Start/End: Original strand, 27747231 - 27747348
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaa 102  Q
    ||||||||||| ||||||||| ||||||||  ||| |||||||||||||  |||||||||| ||||| |||||||||||||| ||| || |||||||||     
T  27747231 tatgtgaaaattacttatttaaattgaaatggagataaaaagatgaagaatggtgatttcaagtcaaaaattgacccaaaactaccccttaatgaagaag 27747330  T
Q  103 ttgtaagggaaaaactag 120  Q
    ||| ||| ||||| ||||    
T  27747331 ttggaagagaaaacctag 27747348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 29777181 - 29777110
Alignment:
Q  16 cttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccac 87  Q
    |||||||||||||||||| ||||||||||||||||||  ||||||||| ||||| |||||||||||||||||    
T  29777181 cttatttagattgaaatagagagaaaaagatgaagaggagtgatttcatgtcaataattgacccaaaaccac 29777110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 14 - 109
Target Start/End: Complemental strand, 12173455 - 12173362
Alignment:
Q  14 cacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaattgtaag 109  Q
    ||||||||| |||||||||| ||| |||||||| ||||  |||||||||||||||| | |||||||||||||||| ||| ||||||||| ||||||    
T  12173455 cacttattttgattgaaatagaga-aaaaagataaagatgggtgatttcaggtcaaaagttgacccaaaaccacc-ctcgatgaagaaaatgtaag 12173362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 12184251 - 12184156
Alignment:
Q  2 ctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||| |||||||||||||||||||  |||||||||||| |  ||| |||||||| |||||| | |||||||||||||||| |||||| ||||    
T  12184251 ctatgtgaaaaacacttatttagattgaaat--agagaaaaagataattaga-gtgatttcgggtcaaaagttgacccaaaaccacctctcaataaaga 12184156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 14 - 109
Target Start/End: Complemental strand, 12417883 - 12417790
Alignment:
Q  14 cacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaattgtaag 109  Q
    ||||||||| |||||||||| ||| |||||||| ||||  |||||||||||||||| | |||||||||||||||| ||| ||||||||| ||||||    
T  12417883 cacttattttgattgaaatagaga-aaaaagataaagatgggtgatttcaggtcaaaagttgacccaaaaccacc-ctcgatgaagaaaatgtaag 12417790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 12428679 - 12428584
Alignment:
Q  2 ctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||| |||||||||||||||||||  |||||||||||| |  ||| |||||||| |||||| | |||||||||||||||| |||||| ||||    
T  12428679 ctatgtgaaaaacacttatttagattgaaat--agagaaaaagataattaga-gtgatttcgggtcaaaagttgacccaaaaccacctctcaataaaga 12428584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 15046861 - 15046758
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaag-agaaaaagatgaagagaggtgatttcaggtcaagaattga-cccaaaaccaccgctcaatgaa 98  Q
    ||||||||||||||||||| ||  ||||||||  |  |||||||||||||||||||||||||||  |||| |||||| ||||||| |||| |||||||||    
T  15046861 tctatgtgaaaatcacttacttgaattgaaatggactagaaaaagatgaagagaggtgatttcatatcaaaaattgaccccaaaatcacccctcaatgaa 15046762  T
Q  99 gaaa 102  Q
    ||||    
T  15046761 gaaa 15046758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 16794252 - 16794185
Alignment:
Q  9 aaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattga 76  Q
    |||||||||||||||||||||| || |||||||||||||||||  |||||||||| ||||| ||||||    
T  16794252 aaaatcacttatttagattgaattagagagaaaaagatgaagatgggtgatttcaagtcaaaaattga 16794185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 37565996 - 37566079
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaaga-gaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaa 83  Q
    ||||||||||||||| ||||||||||||||||| |||  ||||| |||||||  ||||||||||| |||| |||||||||||||    
T  37565996 tctatgtgaaaatcaattatttagattgaaatagagataaaaaaaatgaagaagggtgatttcagatcaataattgacccaaaa 37566079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 24853555 - 24853650
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattg-acccaaaaccaccgctcaat 95  Q
    |||||||| |||||||||||||| ||| ||||| | ||||||||| |||||   |||||||| |||||| ||||| ||| ||||||||| ||||||    
T  24853555 tctatgtgcaaatcacttatttacattaaaatagaaagaaaaagacgaagatgagtgatttcgggtcaataattgaacctaaaaccacctctcaat 24853650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 14545056 - 14545144
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataa---agagaaaaagatgaagaga-ggtgatttcaggtcaagaattgacccaaaaccac 87  Q
    |||||||||| |||||||||||||||||| ||   ||| ||||||||| ||||| |||||||| ||||||| || ||||| ||||||||    
T  14545056 tatgtgaaaaccacttatttagattgaaagaaaagagaaaaaaagatgtagagagggtgattttaggtcaaaaaatgacctaaaaccac 14545144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 31013726 - 31013813
Alignment:
Q  4 atgtgaaaatcacttatttagattgaaataaa---gagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||||||| |||||||||||||||||| |||   | |||||||||| |||| |||||||  ||||||| || ||||| |||||||||    
T  31013726 atgtgaaaaccacttatttagattgaaagaaaagggggaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccacc 31013813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 37971226 - 37971140
Alignment:
Q  4 atgtgaaaatcacttatttagattgaaataaa---gagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccac 87  Q
    |||||||||||||||||||||||||||| |||   |  ||||||||| |||| |||||||  ||||||| || ||||| ||||||||    
T  37971226 atgtgaaaatcacttatttagattgaaagaaaaggggaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccac 37971140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 14585634 - 14585565
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataa---agagaaaaagatgaagagaggtgatttcaggtcaa 69  Q
    ||||||||||||||||||||||||||||| ||   ||| ||||||||| |||| |||||||  |||||||    
T  14585634 tatgtgaaaatcacttatttagattgaaagaaaagagaaaaaaagatgcagaggggtgattctaggtcaa 14585565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 14913040 - 14912989
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagag 52  Q
    ||||| ||||||| |||||||||| ||||||||||||||||| ||| |||||    
T  14913040 tctatatgaaaattacttatttaggttgaaataaagagaaaaggataaagag 14912989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 18890861 - 18890947
Alignment:
Q  4 atgtgaaaatcacttatttagattgaaataaagag--aaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    |||||||||||||||||||||||||||| |||| |  ||||||||| |||   ||||||  ||||||| |||||||| |||| ||||    
T  18890861 atgtgaaaatcacttatttagattgaaagaaaggggaaaaaagatgcagatgagtgattctaggtcaaaaattgacctaaaatcacc 18890947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 33298823 - 33298751
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaa----ataaagagaaaaagatgaagagaggtgatttcaggtcaa 69  Q
    ||||||||||||||||||||||||||||||    | ||| | ||||||||||||| ||||| |||||| ||||    
T  33298823 tctatgtgaaaatcacttatttagattgaattagagaaaaataaaaagatgaagataggtgttttcagctcaa 33298751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 41896444 - 41896405
Alignment:
Q  4 atgtgaaaatcacttatttagattgaaataaagagaaaaa 43  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  41896444 atgtgaaaatcacttatttagattgaaagaaagggaaaaa 41896405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 18733980 - 18733938
Alignment:
Q  9 aaaatcacttatttagattgaaataaagagaaaaagatgaaga 51  Q
    ||||||| ||||||| ||||||||| |||||||||||||||||    
T  18733980 aaaatcaattatttaaattgaaatagagagaaaaagatgaaga 18733938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 25241721 - 25241767
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaa 49  Q
    ||||||| ||||||||||| ||||||||||| | |||||||||||||    
T  25241721 tatgtgacaatcacttattgagattgaaatagaaagaaaaagatgaa 25241767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 43192462 - 43192503
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaa 42  Q
    ||||||| |||| |||||||||||||||||||| ||||||||    
T  43192462 tctatgtaaaaaccacttatttagattgaaatagagagaaaa 43192503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 20227440 - 20227480
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagagaaaaa 43  Q
    |||||| ||| |||||||||||||||||| |||||||||||    
T  20227440 tatgtggaaaccacttatttagattgaaagaaagagaaaaa 20227480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 23230575 - 23230494
Alignment:
Q  7 tgaaaatcacttatttagattgaaataaagag----aaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaac 84  Q
    |||||| |||||||||||||||||| ||| ||    ||||||||| |||| ||||||||  |||||| |||||||| |||||    
T  23230575 tgaaaaccacttatttagattgaaagaaaaaggggaaaaaagatgtagaggggtgatttttggtcaaaaattgacctaaaac 23230494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 31
Target Start/End: Original strand, 26469351 - 26469379
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaa 31  Q
    |||||||||||||||||||||||||||||    
T  26469351 tatgtgaaaatcacttatttagattgaaa 26469379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 4e-48; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 246 - 452
Target Start/End: Original strand, 40185922 - 40186130
Alignment:
Q  246 tggctcgtagccagcatttttcatggtctcgacaatcttttcagcttcatcaaatttcccagcacttgtcaaagacctatgaataccatcatagactgcc 345  Q
    ||||| ||||||||||||| |||||||||  |||||  ||| ||||||||||||||||||||||||||| |||||| || | ||||||||||||||| ||    
T  40185922 tggcttgtagccagcatttgtcatggtcttaacaataatttgagcttcatcaaatttcccagcacttgtaaaagacttaaggataccatcatagacttcc 40186021  T
Q  346 ttggaaagagtata--ccctgatgactcaaatttcttagctaccctgaaaactaaatccaaatttggcttatagcttgcagagatgctctttaaaagcat 443  Q
    ||||||||||||||  |||||  ||||| ||||| |||||||||||||||| ||||||||||  ||||| || |||| ||| |||| |||||||||||||    
T  40186022 ttggaaagagtataccccctgtcgactcgaatttgttagctaccctgaaaaataaatccaaacctggctcatcgctttcagcgatgttctttaaaagcat 40186121  T
Q  444 gatgcagtc 452  Q
     ||||||||    
T  40186122 aatgcagtc 40186130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 30371687 - 30371568
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||| |||||||||||    
T  30371687 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtcaaatattgacccaaaaccacccctcaatgaaga 30371588  T
Q  101 aattgtaagggaaaaactag 120  Q
    ||||||||| ||||| ||||    
T  30371587 aattgtaagagaaaacctag 30371568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 10649416 - 10649317
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||    
T  10649416 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtcaagaattgacccaaaatcacccctcaatgaaga 10649317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 34881672 - 34881559
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||    
T  34881672 tctatgtgaaaatcacttatttagattgaaatagagagaaaa-gatgaagagaggtgatttcaggtcaagaattgacccagaaccacccctcaatggaga 34881574  T
Q  101 aattgtaagggaaaa 115  Q
    || |||||| |||||    
T  34881573 aactgtaagagaaaa 34881559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 26578212 - 26578098
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||| ||||||| |  ||||| ||||    
T  26578212 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagatgagtgatttcaggtcaagaattgaccaaaaaccatccatcaataaaga 26578113  T
Q  101 aattgtaagggaaaa 115  Q
    ||||||||| |||||    
T  26578112 aattgtaagagaaaa 26578098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 21060398 - 21060495
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaa 98  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||| |||||    
T  21060398 tctatgtgaaaatcacttatttagattgaaatatagagaaaaagatgaagagtggtgatttcagatcaagaattgacccaaaaccaccactcgatgaa 21060495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 4 - 120
Target Start/End: Original strand, 36344609 - 36344725
Alignment:
Q  4 atgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaat 103  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||| ||| |||||||||| ||||||||||||||    
T  36344609 atgtgaaaataacttatttagattgaaatatagagaaaaagatgaagaggggtgattttaggtcaagaatcgactcaaaaccacccctcaatgaagaaat 36344708  T
Q  104 tgtaagggaaaaactag 120  Q
    || ||| ||||| ||||    
T  36344709 tggaagagaaaatctag 36344725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 27266977 - 27267064
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  27266977 tctatgtgaaaatcacttatttagattgaaatagagagaaaaatatgaagaggggtgatttcaggtcaagaattgacccaaaaccacc 27267064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 7241745 - 7241644
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||| |||||||| ||||||||||||||||||||| | |||||||||    
T  7241745 tctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagaggggtggtttcaggttaagaattgacccaaaaccaccccccaatgaaga 7241646  T
Q  101 aa 102  Q
    ||    
T  7241645 aa 7241644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 7246921 - 7246820
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||| |||||||| ||||||||||||||||||||| | |||||||||    
T  7246921 tctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagaggggtggtttcaggttaagaattgacccaaaaccaccccccaatgaaga 7246822  T
Q  101 aa 102  Q
    ||    
T  7246821 aa 7246820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 18677583 - 18677684
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||| | ||||||||| |||| |||||||||||||||||| |||||||||||    
T  18677583 tctatgtgaaaatcacttatttagattaaaatagagagaaaaagatgaagagggatgatttcagatcaataattgacccaaaaccacccctcaatgaaga 18677682  T
Q  101 aa 102  Q
    ||    
T  18677683 aa 18677684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 28235548 - 28235429
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    |||||||||||||||||||||||||| |||||| | |||||||||||||||| ||||||||||||||||  ||||||||||||||||| |||||| ||||    
T  28235548 tctatgtgaaaatcacttatttagatcgaaatagaaagaaaaagatgaagaggggtgatttcaggtcaatgattgacccaaaaccacccctcaataaaga 28235449  T
Q  101 aattgtaagggaaaaactag 120  Q
    || || ||| ||||| ||||    
T  28235448 aactggaagagaaaatctag 28235429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 16981251 - 16981139
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaa 102  Q
    |||||| |||||||||||||||||||||||| ||||||||| ||||||||  |||||||||||||||||||||| |||| |||||| |||||||||||||    
T  16981251 tatgtgtaaatcacttatttagattgaaatagagagaaaaatatgaagaggagtgatttcaggtcaagaattgatccaataccacccctcaatgaagaaa 16981152  T
Q  103 ttgtaagggaaaa 115  Q
     || ||| |||||    
T  16981151 atggaagagaaaa 16981139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 43261934 - 43262038
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||||||| |||||||||| ||||| |||| ||||||||| |    
T  43261934 tctatgtgaaaatcacttatttagattgaaatagagataaaaagatgaagatgggtgatttcaggttaagaattgactcaaaatcacctctcaatgaaaa 43262033  T
Q  101 aattg 105  Q
    |||||    
T  43262034 aattg 43262038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 781352 - 781265
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||| |||||||||||    
T  781352 tctatctgaaaatcacttatttagattgaaatatagagaaaaagatgaagatgggtgatttcaggtcaagaattgaaccaaaaccacc 781265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 35475453 - 35475548
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatg 96  Q
    ||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||| ||||||||| |||||||| |||| |||||||    
T  35475453 tctatgtgaaaatcacttatttagattgaaatatagataacaagatgaagagaggtgatttcagatcaagaattaacccaaaatcacccctcaatg 35475548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 2057955 - 2058027
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaat 73  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  2057955 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgattttaggtcaagaat 2058027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 7887056 - 7887168
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaa 102  Q
    ||||||||||||||||||||||||| ||||| |||| |||||| |||||| | |||||||||||||||||| |||||||||||||| ||| |||||||||    
T  7887056 tatgtgaaaatcacttatttagattaaaatagagaggaaaagacgaagagggatgatttcaggtcaagaatggacccaaaaccacccctcgatgaagaaa 7887155  T
Q  103 ttgtaagggaaaa 115  Q
     || ||| |||||    
T  7887156 ctggaagagaaaa 7887168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 7150452 - 7150537
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaacca 86  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||| | |||||||||    
T  7150452 tctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagaggggtgatttcaggtcaaaaattaatccaaaacca 7150537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 11767762 - 11767669
Alignment:
Q  9 aaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaa 102  Q
    ||||||||||||||||||||||||| ||||||||||||||||| || |||||| ||||||| |||||||| ||||||||| | |||||||||||    
T  11767762 aaaatcacttatttagattgaaatatagagaaaaagatgaagacagatgattttaggtcaaaaattgacctaaaaccaccacacaatgaagaaa 11767669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 19281065 - 19281162
Alignment:
Q  5 tgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaa 102  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||  ||||||||| |||||| |||| ||||||||||||| | |||||||||||    
T  19281065 tgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagatgggtgatttccggtcaaaaatttacccaaaaccaccccccaatgaagaaa 19281162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 42579843 - 42579721
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaaga---tgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatga 97  Q
    ||||||||||||||||||||||||||||||||| | ||||||| |   |||| || |||||||||| ||||| |||||||||||||||||| |||||||     
T  42579843 tctatgtgaaaatcacttatttagattgaaatagaaagaaaaaaaaaatgaaaaggggtgatttcatgtcaataattgacccaaaaccacccctcaatgg 42579744  T
Q  98 agaaattgtaagggaaaaactag 120  Q
    ||||| |||||| ||||| ||||    
T  42579743 agaaactgtaagagaaaacctag 42579721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 19259929 - 19260046
Alignment:
Q  1 tctatgtgaaaa-tcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaag 99  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||   |  | ||||||||||||||||||||||||||||||||||| ||||| ||||    
T  19259929 tctatgtgaaaaatcacttatttagattgaaatagagagaaaaaga---attggggtgatttcaggtcaagaattgacccaaaaccacccctcaacgaag 19260025  T
Q  100 aaattgtaagggaaaaactag 120  Q
    |||  ||||| ||||| ||||    
T  19260026 aaaccgtaagagaaaacctag 19260046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 3271526 - 3271624
Alignment:
Q  2 ctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaa 101  Q
    |||||||||||||||||||||||||||||| | |||| |||||||||||||  ||||||||| |||||||||||||| |||| |||| ||||||||||||    
T  3271526 ctatgtgaaaatcacttatttagattgaaacagagag-aaaagatgaagaggagtgatttcatgtcaagaattgacctaaaatcacc-ctcaatgaagaa 3271623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 20257811 - 20257908
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaa 98  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| | |||  | |||||||||||||| |||||||| ||||| ||| ||| |||||    
T  20257811 tctatgtgaaaatcacttatttagattgaaatagagagaaaaagaagtagatggatgatttcaggtcaaaaattgaccaaaaactacccctcgatgaa 20257908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 14211162 - 14211077
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||||||||||||||||||||||||||| |||| |||||||||| |||| |||||||  ||||||| |||||||| |||| ||||    
T  14211162 tatgtgaaaatcacttatttagattgaaagaaagggaaaaagatgcagaggggtgattctaggtcaaaaattgacctaaaatcacc 14211077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 120
Target Start/End: Original strand, 41184578 - 41184680
Alignment:
Q  17 ttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaattgtaagggaaaaa 116  Q
    ||||||||||||||||| |||||||| ||||||||  |||||||||| ||||| ||||||||||||| || | ||||||| ||||| |||||| |||||     
T  41184578 ttatttagattgaaatagagagaaaa-gatgaagaatggtgatttcatgtcaaaaattgacccaaaatcatccctcaatggagaaactgtaagagaaaac 41184676  T
Q  117 ctag 120  Q
    ||||    
T  41184677 ctag 41184680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 11192324 - 11192243
Alignment:
Q  6 gtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||||||||||||||||| |||| ||| ||| |||||||| || | ||||||||||||||||| ||||||||||||||||||    
T  11192324 gtgaaaatcacttatttag-ttgatatagagacaaaaagattaatataggtgatttcaggtcaaaaattgacccaaaaccacc 11192243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 27751840 - 27751782
Alignment:
Q  39 aaaaagatgaagag-aggtgatttcaggtcaagaattgacccaaaaccaccgctcaatg 96  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  27751840 aaaaagatgaagaggaggtgatttcaggtcaagaattgacccaaaaccacccctcaatg 27751782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 2979469 - 2979556
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagag--aaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||||||||||||||||||||||||||| ||||||  ||||||||| |||| |||||||  ||||||| |||||||| |||| ||||    
T  2979469 tatgtgaaaatcacttatttagattgaaagaaagaggaaaaaagatgcagaggggtgattataggtcaaaaattgacctaaaatcacc 2979556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 6445899 - 6445797
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||| ||||||||||||||| ||| | ||| |||||||| ||||||||  |||||||| | || || ||||||| |||||||||| |||||| ||||    
T  6445899 tctatgtaaaaatcacttatttaaattaagatagagagaaaacgatgaagatgggtgattttaagttaaaaattgactcaaaaccacccctcaataaaga 6445800  T
Q  101 aat 103  Q
    |||    
T  6445799 aat 6445797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 8088371 - 8088436
Alignment:
Q  5 tgtgaaaatcacttatttagattgaaataaagag-aaaaagatgaagagaggtgatttcaggtcaa 69  Q
    |||||||||||||||||||||| |||| |||||| ||||||||| |||||||||| ||||||||||    
T  8088371 tgtgaaaatcacttatttagatcgaaagaaagagaaaaaagatgcagagaggtgacttcaggtcaa 8088436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 27576466 - 27576535
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaag-agaggtgatttcaggtcaa 69  Q
    |||||||||| |||||||||||| ||||||||| |||||||| ||||||| ||||| |||||||||||||    
T  27576466 tctatgtgaatatcacttatttacattgaaatagagagaaaaggatgaagaagaggcgatttcaggtcaa 27576535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 28097113 - 28097029
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||||||||||||||||||| ||||||||  || ||||| ||||||||  ||||| |||||||||| ||||||| ||||||||||    
T  28097113 tatgtgaaaatcacttatttatattgaaattgagcgaaaa-gatgaagatgggtgaattcaggtcaaaaattgacacaaaaccacc 28097029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 30298171 - 30298130
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaa 42  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  30298171 tctatgtgaaaatcacttatttagattgaaatatagagaaaa 30298130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 39567227 - 39567140
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaa--gagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||||||||||||||||||||||||||| |||  | |||||||||| ||||  ||||||  ||||||| |||||||| |||| ||||    
T  39567227 tatgtgaaaatcacttatttagattgaaagaaagggggaaaaagatgcagaggcgtgattctaggtcaaaaattgacctaaaatcacc 39567140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 42432863 - 42432803
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgattt 61  Q
    ||||| ||||| |||||| |||||||||||||| ||||||||| || ||||||||||||||    
T  42432863 tctatatgaaattcacttttttagattgaaatagagagaaaaatataaagagaggtgattt 42432803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 43148691 - 43148607
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccac 87  Q
    ||||||||| |||||||||||||| |||||| |||||||| |||||| |    | |||| | |||||||||||||||||||||||    
T  43148691 tatgtgaaagtcacttatttagatcgaaatagagagaaaaggatgaaaatgaataattttaagtcaagaattgacccaaaaccac 43148607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 15570873 - 15570791
Alignment:
Q  1 tctatgtgaaaa-tcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaa 82  Q
    |||||||||||| |||  ||||||||||||| || |||||||||||||||||| | |||||||| ||||| || |||| ||||    
T  15570873 tctatgtgaaaaatcaaatatttagattgaattatagagaaaaagatgaagagggatgatttcaagtcaaaaactgactcaaa 15570791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 42886442 - 42886392
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga 51  Q
    |||||||||||| ||||||||| |||||||||| |||||||| ||||||||    
T  42886442 tctatgtgaaaagcacttattttgattgaaatagagagaaaaggatgaaga 42886392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 1696983 - 1697015
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaata 33  Q
    |||||||||||||||||||||||||||||||||    
T  1696983 tctatgtgaaaatcacttatttagattgaaata 1697015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 8514796 - 8514896
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaa 102  Q
    ||||||||||| | |||||| |||| |||||||||||||||||||| ||  | ||||||||| |  | |||||| ||||| ||||| | ||| |||||||    
T  8514796 tatgtgaaaataatttattttgattaaaataaagagaaaaagatgatgaaggatgatttcagatttaaaattgatccaaagccaccccacaacgaagaaa 8514895  T
Q  103 t 103  Q
    |    
T  8514896 t 8514896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 3166322 - 3166259
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcag 64  Q
    |||||||||||||  |||||||| ||| ||||||||| |||||||||||||   ||||||||||    
T  3166322 tctatgtgaaaattgcttatttatatttaaataaagataaaaagatgaagatgagtgatttcag 3166259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 10148761 - 10148698
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcag 64  Q
    ||||||||||||||||||||||||||| ||||    ||||||| |||||||| | |||||||||    
T  10148761 tctatgtgaaaatcacttatttagattaaaatgggaagaaaaatatgaagagggttgatttcag 10148698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 31802591 - 31802676
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    |||| ||||||||| |||||||||||||||||||| ||| ||| ||||| ||| || |||||| || || |||||| |||||||||||    
T  31802591 tctacgtgaaaatcccttatttagattgaaataaatagagaaa-atgaaaaga-gtaatttcaagttaaaaattgatccaaaaccacc 31802676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 38549152 - 38549207
Alignment:
Q  7 tgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttc 62  Q
    ||||||| | ||||||||||||||||  ||| ||||||||||||| ||||||||||    
T  38549152 tgaaaattagttatttagattgaaattgagataaaaagatgaagataggtgatttc 38549207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 86
Target Start/End: Original strand, 41418694 - 41418745
Alignment:
Q  36 gagaaaaagatgaagagagg-tgatttcaggtcaagaattgacccaaaacca 86  Q
    ||||||||||||||||| || |||||||||||||| ||||| ||||||||||    
T  41418694 gagaaaaagatgaagagggggtgatttcaggtcaaaaattgtcccaaaacca 41418745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 1582238 - 1582288
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga 51  Q
    |||| |||||||||||||||||||||| ||||  ||||||||| |||||||    
T  1582238 tctacgtgaaaatcacttatttagattaaaatggagagaaaaatatgaaga 1582288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 1602577 - 1602527
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga 51  Q
    |||| |||||||||||||||||||||| ||||  ||||||||| |||||||    
T  1602577 tctacgtgaaaatcacttatttagattaaaatggagagaaaaatatgaaga 1602527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 26878235 - 26878295
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaa---gagaaaaagatgaagagaggtgatt 60  Q
    |||||||||| |||||||||||||||||| |||   | |||||||||| ||||||||||||    
T  26878235 tatgtgaaaaccacttatttagattgaaagaaaagggggaaaaagatgtagagaggtgatt 26878295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 33029776 - 33029726
Alignment:
Q  38 gaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||||||||||||  |||||||||  ||||| ||||||||||||||||||    
T  33029776 gaaaaagatgaagacgggtgatttcgagtcaaaaattgacccaaaaccacc 33029726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 7036160 - 7036072
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaa-taaagag--aaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    |||||||||| ||||||||||||||||||  ||||||  ||||||||| |||   ||||||| ||||||| || ||||| |||||||||    
T  7036160 tatgtgaaaaccacttatttagattgaaagaaaagaggaaaaaagatgtagatgagtgattttaggtcaaaaaatgacctaaaaccacc 7036072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 24229942 - 24230006
Alignment:
Q  4 atgtgaaaatcacttatttagattgaa--ataaagagaaaaagatgaagagaggtgatttcaggt 66  Q
    |||||||||||||||||||||||||||  | |||| |||||| ||| |||| |||||||| ||||    
T  24229942 atgtgaaaatcacttatttagattgaaagaaaaagggaaaaatatgtagaggggtgattttaggt 24230006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 36
Target Start/End: Original strand, 28541069 - 28541102
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaag 36  Q
    ||||||||||||||||||||||||||||| ||||    
T  28541069 tatgtgaaaatcacttatttagattgaaagaaag 28541102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 42432203 - 42432287
Alignment:
Q  10 aaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaat 95  Q
    ||||||||| |||  ||||||| | ||||||||| ||||||||||||||||||  ||||| ||||||   ||||||||| ||||||    
T  42432203 aaatcactttttttaattgaaaaagagagaaaaatatgaagagaggtgatttcgagtcaa-aattgattgaaaaccacccctcaat 42432287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 4953998 - 4953958
Alignment:
Q  48 aagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||| ||||||| || ||||||||||||||||||||||||    
T  4953998 aagaggggtgattccaagtcaagaattgacccaaaaccacc 4953958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 17682836 - 17682903
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaa 69  Q
    ||||||||||||||  ||||||||||| |||  | |||| |||||||||||| ||||||||| ||||||    
T  17682836 tctatgtgaaaatcgtttatttagatt-aaacgatgagataaagatgaagaggggtgatttcgggtcaa 17682903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 27751889 - 27751857
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaata 33  Q
    ||||||||||||||||||||||| |||||||||    
T  27751889 tctatgtgaaaatcacttatttatattgaaata 27751857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 115
Target Start/End: Original strand, 35676227 - 35676306
Alignment:
Q  35 agagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaattgtaagggaaaa 115  Q
    |||||||||||||||||  | |||||| |||| || |||||| |||||||||||  ||||||||||||  ||||| |||||    
T  35676227 agagaaaaagatgaagat-gatgattttaggttaaaaattgatccaaaaccacccttcaatgaagaaacagtaagagaaaa 35676306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 96; Significance: 7e-47; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 2843344 - 2843463
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||  ||||||||||    
T  2843344 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgttttcaggtcaagaattgacccaaaaccacccttcaatgaaga 2843443  T
Q  101 aattgtaagggaaaaactag 120  Q
    ||||||||| ||||| ||||    
T  2843444 aattgtaagagaaaacctag 2843463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 46821974 - 46821855
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |    
T  46821974 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtcaagaattgacccaaaaccacccctcaatgaaaa 46821875  T
Q  101 aattgtaagggaaaaactag 120  Q
    |||| |||| ||||| ||||    
T  46821874 aattataagagaaaacctag 46821855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 46339013 - 46338899
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||| ||| |||||||||||    
T  46339013 tctatgtgaaaatcacttatttacattgaaataaagagaaaaagatgaagagggataatttcaggtcaagaattgacccaaaactacccctcaatgaaga 46338914  T
Q  101 aattgtaagggaaaa 115  Q
    ||||||||| |||||    
T  46338913 aattgtaagagaaaa 46338899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 21266352 - 21266251
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||| ||||    
T  21266352 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcatgtcaataattgacccaaaaccacccctcaataaaga 21266253  T
Q  101 aa 102  Q
    ||    
T  21266252 aa 21266251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 26492325 - 26492217
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||    
T  26492325 tctatgtgaaaatcacttatttaaattgaaatagagagaaaaagatgaagaggggttatttcaggtcaagaattgacccaaaaccacccctcaatgaaga 26492226  T
Q  101 aattgtaag 109  Q
    || ||||||    
T  26492225 aactgtaag 26492217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 32684645 - 32684526
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||| | |||||||||||||||||||||||||||||||||| |||||||||||    
T  32684645 tctatgtgaaaatcacttatttagattgaaatagagagaaaacgatgaagacatgtgatttcaggtcaagaattgacccaaaaccacccctcaatgaaga 32684546  T
Q  101 aattgtaagggaaaaactag 120  Q
    ||  ||||| ||||| ||||    
T  32684545 aaccgtaagagaaaacctag 32684526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 7 - 109
Target Start/End: Complemental strand, 26583668 - 26583566
Alignment:
Q  7 tgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaattgt 106  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||| |||    
T  26583668 tgaaaatcacttatttagattgaaatagagataaaaagatgaagaggggtgatttcaggtcaagaattgaccaaaaaccacccctcaatgaagaaactgt 26583569  T
Q  107 aag 109  Q
    |||    
T  26583568 aag 26583566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 35496292 - 35496406
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||  |||||||| |||||||||||||||||||||||||| |||||||||||    
T  35496292 tctatgtgaaaatcacttaattagattgaaatagagagaaaaagatgaagattggtgattttaggtcaagaattgacccaaaaccacccctcaatgaaga 35496391  T
Q  101 aattgtaagggaaaa 115  Q
    ||  ||||| |||||    
T  35496392 aacagtaagagaaaa 35496406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 23425488 - 23425575
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  23425488 tctatgtaaaaatcacttatttagattgaaatatagagaaaaagatgaagaggggtgatttcaggtcaagaattgacccaaaaccacc 23425575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 42311240 - 42311121
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    |||||||||| |||||||||||||||||||||| |||||||| ||||||||| | ||||||||||||||||||||||||||||||||| |||| ||||||    
T  42311240 tctatgtgaatatcacttatttagattgaaatagagagaaaatgatgaagagggatgatttcaggtcaagaattgacccaaaaccacccctcagtgaaga 42311141  T
Q  101 aattgtaagggaaaaactag 120  Q
    || | |||| ||||| ||||    
T  42311140 aactctaagagaaaacctag 42311121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 42067177 - 42067264
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||| ||||    
T  42067177 tctatgtgaaaatcacttatttagattgaaatatagataacaagatgaagagaggtgatttcaggtcaagaattgacccaaaatcacc 42067264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 1485373 - 1485474
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||  |||||||| |||||||||||| ||||||||||||| | |||||||||    
T  1485373 tctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagacgggtgattttaggtcaagaattaacccaaaaccaccccccaatgaaga 1485472  T
Q  101 aa 102  Q
    ||    
T  1485473 aa 1485474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 20116543 - 20116442
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||||  |||||||||||||||| |||||||||||||| ||| |||| ||||||    
T  20116543 tctatgtgaaaatcacttatttagattgaaatagatagaaaaagatgaagaagggtgatttcaggtcaaaaattgacccaaaactacccctcattgaaga 20116444  T
Q  101 aa 102  Q
    ||    
T  20116443 aa 20116442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 22927991 - 22928088
Alignment:
Q  5 tgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaa 102  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||| |  ||||||||||    
T  22927991 tgtgaaagtcacttatttagattgaaatagagagaaaaagatgaaaaggggtgatttcaggtcaagaattgacccaaaaccaccccctaatgaagaaa 22928088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 35667348 - 35667451
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||  |||||||| | |||||||||||| ||||||||||| ||||||||| |    
T  35667348 tctatgtgaaaatcacttatttagattgaaatagagagaaaaatatgaagaagggtgattttaagtcaagaattgatccaaaaccacccctcaatgaaaa 35667447  T
Q  101 aatt 104  Q
    ||||    
T  35667448 aatt 35667451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 48207862 - 48207776
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  48207862 tctatgtgaaaatcacttatttagattgaaatattgagaaaaagatgaagaggggtgatttcaggtcaagaa-tgacccaaaaccacc 48207776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 1448946 - 1449039
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaa 94  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||   ||| ||||||||||||||||||||||||||||||| |||||    
T  1448946 tctatgtgaaaatcacttatttagattgaaatagagagaaagagatgaagtttggttatttcaggtcaagaattgacccaaaaccacccctcaa 1449039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 31235908 - 31236029
Alignment:
Q  1 tctatgtgaaaa-tcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccac-cgctcaatgaa 98  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||||||| || ||||||| ||||| ||||||||||||| ||| | |||||||||    
T  31235908 tctatgtgaaaaatcacttatttagattgaaatagagagaaaaagatgaagaggggagatttcatgtcaaaaattgacccaaaatcactccctcaatgaa 31236007  T
Q  99 gaaattgtaagggaaaaactag 120  Q
    |||| || ||| ||||| ||||    
T  31236008 gaaaatggaagagaaaatctag 31236029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 433809 - 433896
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||||||||| ||| ||||||||||||||||| ||||||||||||||| || | |||||||||||||| ||||||||||||||||||    
T  433809 tctatgtgaaagtcatttatttagattgaaatagagagaaaaagatgaaaagggatgatttcaggtcaaaaattgacccaaaaccacc 433896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 42408319 - 42408225
Alignment:
Q  4 atgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaa 98  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||  | ||||||||||||||||| ||||| ||||||| | |||||||||    
T  42408319 atgtgaaaaacaattatttagattgaaataaagagaaaaagatgaagatggatgatttcaggtcaagaactgaccaaaaaccatccctcaatgaa 42408225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 23085481 - 23085380
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga-gaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaag 99  Q
    ||||||||||| ||| ||||||||||||||||| | ||||||||||||||| | |||||||||| ||||| |||||||||||||||||| | ||||||||    
T  23085481 tctatgtgaaagtcaattatttagattgaaatagaaagaaaaagatgaagagggggtgatttcaagtcaataattgacccaaaaccacc-cccaatgaag 23085383  T
Q  100 aaa 102  Q
    |||    
T  23085382 aaa 23085380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 3860912 - 3860828
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaacc 85  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||| |||||| ||||||||| || || ||||||| |||||||    
T  3860912 tctatgtgaaaatcacttatttatattgaaacaaagagaaaaagataaagagatgtgatttcaagttaaaaattgacacaaaacc 3860828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 14627998 - 14628105
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga-gaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaa 101  Q
    |||||||||||||||||||||||||||| || ||| ||||||||||||| ||||| ||||| ||| || | ||||||||||||||||  ||||||||||     
T  14627998 tatgtgaaaatcacttatttagattgaattagagaaaaaaagatgaagaggaggtaatttccggtaaaaatttgacccaaaaccacccttcaatgaagac 14628097  T
Q  102 attgtaag 109  Q
    | ||||||    
T  14628098 actgtaag 14628105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 45199148 - 45199235
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||| ||||||||||||||||| ||| ||||| |||||||||||||||||  |||||||||||||||| | |||| |||||||||||    
T  45199148 tctatatgaaaatcacttatttaaattaaaatatagagaaaaagatgaagatgggtgatttcaggtcaatagttgatccaaaaccacc 45199235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 6001982 - 6001894
Alignment:
Q  1 tctatgtgaaaa-tcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    |||||||||||| ||||||||||||||| |||||  ||||||||||||||||  |||||||||||||||| |||||| |||||| ||||    
T  6001982 tctatgtgaaaaatcacttatttagattaaaatagggagaaaaagatgaagatgggtgatttcaggtcaaaaattgatccaaaatcacc 6001894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 12539122 - 12539191
Alignment:
Q  51 agaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaattgtaagggaaaaactag 120  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||| || ||| ||||| ||||    
T  12539122 agaggtgatttcaggtcaagaattgaccaaaaaccacccctcaatgaagaaactggaagagaaaatctag 12539191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 32522043 - 32522166
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagag-----aaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaat 95  Q
    ||||||||||||||||||||||| ||||||||| ||||     |||||||||||||  |||||||||||||||| | | |||| ||||||| | ||||||    
T  32522043 tctatgtgaaaatcacttatttaaattgaaatagagagagaaaaaaaagatgaagatgggtgatttcaggtcaa-attcgacctaaaaccatccctcaat 32522141  T
Q  96 gaagaaattgtaagggaaaaactag 120  Q
    |||||| ||| ||| ||||| ||||    
T  32522142 gaagaagttggaagagaaaacctag 32522166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 20083289 - 20083205
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    |||||||||||  |||||||||||||||||| | |||||||||||||||| ||| |||| ||||||| |||| ||| |||||||||    
T  20083289 tatgtgaaaattgcttatttagattgaaatagaaagaaaaagatgaagagtggt-attttaggtcaaaaattaacctaaaaccacc 20083205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 119
Target Start/End: Complemental strand, 35261256 - 35261139
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaag-agaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaa 101  Q
    |||||||||||||||||||| |||||||||  |  |||||||||||||||  |||||||| ||||||| ||||| |||||||| |||  |||| ||||||    
T  35261256 tatgtgaaaatcacttatttggattgaaatggactagaaaaagatgaagatgggtgattttaggtcaaaaattggcccaaaactaccattcaacgaagaa 35261157  T
Q  102 attgtaagggaaaaacta 119  Q
    | || ||  |||||||||    
T  35261156 actgaaaaagaaaaacta 35261139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 1749300 - 1749385
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagag-aaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||||||||||||||||||||||||||| |||| | |||||||||||| | |||||||  ||||||| |||||||| |||| ||||    
T  1749300 tatgtgaaaatcacttatttagattgaaagaaagggaaaaaagatgaagcg-ggtgattctaggtcaaaaattgacctaaaatcacc 1749385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 17611055 - 17610998
Alignment:
Q  37 agaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaa 94  Q
    |||||||||||||||| |||||||||||||||  |||||||| ||||||||| |||||    
T  17611055 agaaaaagatgaagaggggtgatttcaggtcataaattgacctaaaaccacccctcaa 17610998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 36143826 - 36143729
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaa 98  Q
    |||| ||||||| ||||||||||||||||| || |||||||||||||||||  | | |||||| || || | |||| ||||||| ||| |||||||||    
T  36143826 tctacgtgaaaaacacttatttagattgaattagagagaaaaagatgaagatggataatttcacgttaaaatttgatccaaaacaacccctcaatgaa 36143729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 5546317 - 5546277
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagagaaaaa 43  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  5546317 tatgtgaaaatcacttatttagattgaaatagagagaaaaa 5546277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 19404911 - 19404998
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaa--gagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    |||||||||| |||||||||||||||||| |||  || ||||||||| |||| |||||||  ||||||| || ||||| |||||||||    
T  19404911 tatgtgaaaaccacttatttagattgaaagaaaaggaaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccacc 19404998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 24351000 - 24351087
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagagaaaaa--gatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||||||||||||||||||||||||||| |||| ||||||  |||| | || |||||||  ||||||| |||||||| |||| ||||    
T  24351000 tatgtgaaaatcacttatttagattgaaagaaagggaaaaaaggatgcacaggggtgattctaggtcaaaaattgacctaaaatcacc 24351087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 35132885 - 35132798
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagag--aaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||||||||||||||||||||||| ||| |||| |  ||||||||| |||| |||||||  ||||||| |||||||| |||| ||||    
T  35132885 tatgtgaaaatcacttatttagattaaaagaaaggggaaaaaagatgtagaggggtgattctaggtcaaaaattgacctaaaatcacc 35132798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 6558817 - 6558762
Alignment:
Q  61 tcaggtcaagaattgacccaaaacca-ccgctcaatgaagaaattgtaagggaaaa 115  Q
    |||||||||||||||||||||||||| || ||||||||| |||||||||| |||||    
T  6558817 tcaggtcaagaattgacccaaaaccaccccctcaatgaaaaaattgtaagagaaaa 6558762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 22742872 - 22742813
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagag--aaaaagatgaagagaggtgatt 60  Q
    ||||||||||||||||||||||||||||| |||| |  ||||||||| |||| |||||||    
T  22742872 tatgtgaaaatcacttatttagattgaaagaaaggggaaaaaagatgcagaggggtgatt 22742813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 34899764 - 34899850
Alignment:
Q  4 atgtgaaaatcacttatttagattgaaataaa---gagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccac 87  Q
    ||||||||| |||||||||||||||||| |||   || ||||||||| |||| |||||||  ||||||| || ||||| ||||||||    
T  34899764 atgtgaaaaccacttatttagattgaaagaaaagggaaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccac 34899850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 1100890 - 1100969
Alignment:
Q  9 aaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    |||||||||| || | ||||||||| |||||||||||||||||   ||| |||| |||||| | |||||||||| |||||    
T  1100890 aaaatcacttgttaaaattgaaatagagagaaaaagatgaagatgagtggtttcgggtcaaaatttgacccaaagccacc 1100969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 102
Target Start/End: Original strand, 17499797 - 17499864
Alignment:
Q  35 agagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaa 102  Q
    |||||||||||||||||   ||||||| |||| ||  ||||||||||||| ||| |||||||||||||    
T  17499797 agagaaaaagatgaagatgagtgattttaggttaaatattgacccaaaactacccctcaatgaagaaa 17499864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 102
Target Start/End: Complemental strand, 17553417 - 17553350
Alignment:
Q  35 agagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaa 102  Q
    |||||||||||||||||   ||||||| |||| ||  ||||||||||||| ||| |||||||||||||    
T  17553417 agagaaaaagatgaagatgagtgattttaggttaaatattgacccaaaactacccctcaatgaagaaa 17553350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 5078551 - 5078637
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataa-agagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||| |||||||||||||||||| |||||||  |||| ||||||| |||| |||||||  ||||||| || ||||| |||| ||||    
T  5078551 tatgtaaaaatcacttatttagatcgaaataatggagagaaagatgcagaggggtgattctaggtcaaaaaatgacctaaaatcacc 5078637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 28476155 - 28476070
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaa-gagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||||||||||||||||||||||||||| ||| |||||||| || | | | |||||||  ||||||| |||||||| |||| ||||    
T  28476155 tatgtgaaaatcacttatttagattgaaagaaaggagaaaaaaat-atgcggggtgattctaggtcaaaaattgacctaaaatcacc 28476070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 48930714 - 48930657
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagag--aaaaagatgaagagaggtga 58  Q
    ||||||||||||||||||||||||||||| |||| |  ||||||||| |||| |||||    
T  48930714 tatgtgaaaatcacttatttagattgaaagaaaggggaaaaaagatgtagaggggtga 48930657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 7640899 - 7640928
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaa 30  Q
    ||||||||||||||||||||||||||||||    
T  7640899 tctatgtgaaaatcacttatttagattgaa 7640928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 25068019 - 25067978
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagagaaaaag 44  Q
    |||||| |||||||||||||||||||||| ||| ||||||||    
T  25068019 tatgtggaaatcacttatttagattgaaagaaatagaaaaag 25067978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 30756976 - 30757063
Alignment:
Q  4 atgtgaaaatcacttatttagattgaaataaa---gagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    |||||||||||||||||||||||||||| |||   |  ||||||||| |||| |||||||  ||||||| || | ||| |||||||||    
T  30756976 atgtgaaaatcacttatttagattgaaagaaaaggggaaaaaagatgtagaggggtgattctaggtcaaaaaattacctaaaaccacc 30757063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 37837615 - 37837702
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaa--gagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    |||||| ||| |||||||||||||||||| |||  |  ||||||||| |||| |||||||  ||||||| || ||||| |||||||||    
T  37837615 tatgtgtaaaccacttatttagattgaaagaaaagggaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccacc 37837702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 44311953 - 44311993
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagagaaaaa 43  Q
    |||||| ||| |||||||||||||||||| |||||||||||    
T  44311953 tatgtggaaaccacttatttagattgaaagaaagagaaaaa 44311993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 7e-47; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 27249268 - 27249387
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||  ||||||||||    
T  27249268 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtcaagtattgacccaaaaccacccttcaatgaaga 27249367  T
Q  101 aattgtaagggaaaaactag 120  Q
    ||||||||| ||||| ||||    
T  27249368 aattgtaagagaaaacctag 27249387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 36233969 - 36233850
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||    
T  36233969 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtcatgaattgacccaaaaccacccctcaatgaaga 36233870  T
Q  101 aattgtaagggaaaaactag 120  Q
    ||||| ||| ||||| ||||    
T  36233869 aattgcaagagaaaatctag 36233850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 30420641 - 30420534
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||| |||||||||||    
T  30420641 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtcaaaaattgatccaaaaccacccctcaatgaaga 30420542  T
Q  101 aattgtaa 108  Q
    ||||||||    
T  30420541 aattgtaa 30420534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 45128168 - 45128050
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  45128168 tctatgtgaaagtcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtcaagaattgacccaaaaccacc-ctcaatgaaga 45128070  T
Q  101 aattgtaagggaaaaactag 120  Q
    ||| | ||| ||||| ||||    
T  45128069 aatgggaagagaaaacctag 45128050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 21570525 - 21570622
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaa 98  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  21570525 tctatgtgaaaatcacttatttagattgaaatatagagaaaaagatgaagaggggtgatttcaggtcaagaattgacccaaaaccaccactcaatgaa 21570622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 7015827 - 7015962
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||| | | |||||||||    
T  7015827 tctatgtgaaaatcaattatttagattgaaataaagagaaaaagattaggaggggtgatttcaggtcaagaattgacccaaaaccaacccccaatgaaga 7015926  T
Q  101 aattgtaagggaaaaactagggccagcttgttggaga 137  Q
    ||||||||| | |||| ||||||| ||| ||||||||    
T  7015927 aattgtaagag-aaaattagggccggctagttggaga 7015962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 3270345 - 3270459
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| |   |||||||||||||||||||||||||||||||||| |||||||||||    
T  3270345 tctatgtgaaaatcacttatttagattgaaataaaaagaaaaagatgaaaatgagtgatttcaggtcaagaattgacccaaaaccacccctcaatgaaga 3270444  T
Q  101 aattgtaagggaaaa 115  Q
    ||| ||||| |||||    
T  3270445 aatcgtaagagaaaa 3270459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 2808587 - 2808688
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||||||||| ||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  2808587 tctatgtgaaaatcacttatttagactgaaatagagagaaatagatgaagaggggtgatttcaggtcaagaattgacccaaaaccacccctcaatgaaga 2808686  T
Q  101 aa 102  Q
    ||    
T  2808687 aa 2808688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 6173596 - 6173495
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||| ||||||||| |||||||||||    
T  6173596 tctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagaggggtgatttcaggtcaagaatagaccgaaaaccacccctcaatgaaga 6173497  T
Q  101 aa 102  Q
    ||    
T  6173496 aa 6173495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 8971743 - 8971853
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagag--aaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaa 98  Q
    ||||||||||||||||||||||||||| ||||||||||  |||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||||    
T  8971743 tctatgtgaaaatcacttatttagattaaaataaagagagaaaaagatgaagagggatgatttcaggtcaagaattgacccaaaaccacccctcaatgaa 8971842  T
Q  99 gaaattgtaag 109  Q
    |||| ||||||    
T  8971843 gaaactgtaag 8971853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 41712882 - 41713001
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||||||||||| ||||| |||||||| |||||| |  |||||||||| |||||||||| ||||||||||||| |||||||||||    
T  41712882 tctatgtgaaaatcacttatttagattaaaatagagagaaaatgatgaaaatgggtgatttcacgtcaagaattaacccaaaaccacccctcaatgaaga 41712981  T
Q  101 aattgtaagggaaaaactag 120  Q
    ||||||||| ||||| ||||    
T  41712982 aattgtaagagaaaacctag 41713001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 3725145 - 3725031
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||   |||||| ||||||| |||||||||||||||||| |||||| ||||    
T  3725145 tctatgtgaaaatcacttatttatattgaaatagagagaaaaagatgaagaggaatgattttaggtcaaaaattgacccaaaaccacccctcaataaaga 3725046  T
Q  101 aattgtaagggaaaa 115  Q
    ||||||||| |||||    
T  3725045 aattgtaagagaaaa 3725031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 34598952 - 34598832
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga-gaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaag 99  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| |||||||||||||| ||||||||||| ||||| ||||    
T  34598952 tctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagatgagttgatttgaggtcaagaattgatccaaaaccacccctcaacgaag 34598853  T
Q  100 aaattgtaagggaaaaactag 120  Q
    |||  ||||| ||||| ||||    
T  34598852 aaacggtaagagaaaacctag 34598832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 459391 - 459505
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    |||||||||||||| |||||||| | ||||||| |||||||| ||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||    
T  459391 tctatgtgaaaatcgcttatttaaaatgaaatagagagaaaaggatgaagaggggtgatttcaggtcaaaaattgacccaaaaccacccctcaatgaaga 459490  T
Q  101 aattgtaagggaaaa 115  Q
    || || ||| |||||    
T  459491 aactggaagagaaaa 459505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 9986462 - 9986583
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaaga--tgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaa 98  Q
    |||||||||||||||||||||||||||||| || ||| ||||| |  ||||||| | ||||||||||||||||||||||||||||||||| |||||||||    
T  9986462 tctatgtgaaaatcacttatttagattgaattagagataaaaaaaattgaagagggatgatttcaggtcaagaattgacccaaaaccacccctcaatgaa 9986561  T
Q  99 gaaattgtaagggaaaaactag 120  Q
    |||| |||||| ||||| ||||    
T  9986562 gaaactgtaagagaaaacctag 9986583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 40626144 - 40626258
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    |||||||||||||| |||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||| ||||||||| |||| |||||| ||||    
T  40626144 tctatgtgaaaatcccttatttagattgaaatagagagaaaaagacgaagaggggtgatttcaggtcaagaatagacccaaaatcacccctcaattaaga 40626243  T
Q  101 aattgtaagggaaaa 115  Q
    || || ||| |||||    
T  40626244 aaatggaagagaaaa 40626258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 40660048 - 40660159
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||   ||||||||||||||||||||||| |||||||||| |||||||||||    
T  40660048 tctatgtgaaaatcacttatttagattgaaata--gagaaaaagatgaagatgtgtgatttcaggtcaagaattgactcaaaaccacc-ctcaatgaaga 40660144  T
Q  101 aattgtaagggaaaa 115  Q
    || | |||| |||||    
T  40660145 aactctaagagaaaa 40660159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 27477119 - 27477025
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaat 95  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||| ||||| |||||||||||||||| | ||||||    
T  27477119 tctatgtgaaaattacttatttagattgaaatatagagaaaaagatgaagaggggtgatttcatgtcaataattgacccaaaaccatccctcaat 27477025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 4192801 - 4192717
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccac 87  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||| |||||| ||||||||||    
T  4192801 tatgtgaaaatcacttatttagattgaaatatagagaaaaagatgaagaggggtgatctcaggtcaaaaattgatccaaaaccac 4192717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 32913206 - 32913119
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||||||||||||||||||||| ||||||||| |||||||| ||| ||||| ||||||||||||||||||||||| |||||||||||    
T  32913206 tctatgtgaaaatcacttatttaaattgaaatatagagaaaaggatcaagaggggtgatttcaggtcaagaattgatccaaaaccacc 32913119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 42949679 - 42949577
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagaga-aaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaag 99  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||| ||  |||| |||| ||||| ||||    
T  42949679 tctatgtgaaaatcacttatttagattgaaataaagagaaaaaagatgaagaggggtgatttcaagtcaagaattaacataaaatcacccctcaacgaag 42949580  T
Q  100 aaa 102  Q
    |||    
T  42949579 aaa 42949577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 32680699 - 32680799
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||   ||||||||||||||||||| |||| ||||||||| | |||||||||    
T  32680699 tctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagatgagtgatttcaggtcaagaatcgaccgaaaaccacc-cccaatgaaga 32680797  T
Q  101 aa 102  Q
    ||    
T  32680798 aa 32680799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 20047199 - 20047317
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||| ||| ||||||||||||||||||| | ||||||||||||||| || ||||||||||||||||||||||| ||||||| ||| | |||||||||    
T  20047199 tctatgtaaaagtcacttatttagattgaaaaagagagaaaaagatgaatag-ggtgatttcaggtcaagaattgatccaaaactaccccccaatgaaga 20047297  T
Q  101 aattgtaagggaaaaactag 120  Q
    ||  ||||| ||||| ||||    
T  20047298 aacggtaagagaaaacctag 20047317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 4228096 - 4228011
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaacca 86  Q
    |||||||| |||||||||||||| ||||||||||||| ||||| |||||||   ||||||||||||||||||||||||||||||||    
T  4228096 tctatgtgtaaatcacttatttatattgaaataaagataaaaatatgaagatgtgtgatttcaggtcaagaattgacccaaaacca 4228011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 39641976 - 39642076
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||| ||||||| ||||||||| ||||||||||||||||| | ||||||||||||||| |||||| ||||| ||||  ||||| |||||    
T  39641976 tctatgtgaaaatcatttatttaaattgaaatagagagaaaaagatgaagataagtgatttcaggtcaaaaattgatccaaagccactcctcaacgaaga 39642075  T
Q  101 a 101  Q
    |    
T  39642076 a 39642076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 25086986 - 25086897
Alignment:
Q  13 tcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaa 102  Q
    |||||||| |||||| ||||| |  ||||||||||||||| |||||||||||||||| |||||||||||||||||| || ||||||||||    
T  25086986 tcacttatatagattcaaatagatggaaaaagatgaagaggggtgatttcaggtcaataattgacccaaaaccacccctaaatgaagaaa 25086897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 120
Target Start/End: Original strand, 33229129 - 33229224
Alignment:
Q  25 attgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaattgtaagggaaaaactag 120  Q
    ||||||||| ||| ||||||||||||||||||||||| || |||| ||||||||||||||||||  ||||||||||||  ||||| ||||| ||||    
T  33229129 attgaaatagagaaaaaaagatgaagagaggtgattttagctcaataattgacccaaaaccacccttcaatgaagaaacagtaagagaaaacctag 33229224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 27949387 - 27949252
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaacca-ccgctcaatgaag 99  Q
    ||||||||||||||||||||||||||||||| | || ||||| |||||| ||  ||||||||||||||||||||| ||||||| || || || |||||||    
T  27949387 tctatgtgaaaatcacttatttagattgaaacagagcgaaaaggatgaatag-tgtgatttcaggtcaagaattgtcccaaaatcacccccttaatgaag 27949289  T
Q  100 aaattgtaagggaaaaactagggccagcttgttggaga 137  Q
    ||| || ||| | ||||||||||||  |||||| ||||    
T  27949288 aaaatggaagag-aaaactagggccgacttgttagaga 27949252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 24587669 - 24587593
Alignment:
Q  10 aaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaacca 86  Q
    |||||| ||||||| ||||||||| ||| |||||||||||||||||||||||  |||||| ||||||||||||||||    
T  24587669 aaatcatttatttaaattgaaatatagataaaaagatgaagagaggtgattttgggtcaaaaattgacccaaaacca 24587593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 31581836 - 31581887
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagag 52  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  31581836 tctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagag 31581887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 26025526 - 26025595
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga-gaggtgatttcaggtcaa 69  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||| | ||||||||||| ||||    
T  26025526 tctatgtgaaaaccacttatttagattgaaatagagagaaaaagatgaagatggggtgatttcagatcaa 26025595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 41430992 - 41430929
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcag 64  Q
    ||||||| ||| | ||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  41430992 tctatgtaaaagtgacttatttagattgaaatatagagaaaaagatgaagaggggtgatttcag 41430929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 43397277 - 43397363
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaa-gagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    |||||||||| |||||||||||||||||| ||| | |||||||||| ||||||||||||  ||||||| || ||||| |||||||||    
T  43397277 tatgtgaaaaccacttatttagattgaaagaaaagggaaaaagatgtagagaggtgattctaggtcaaaaaatgacctaaaaccacc 43397363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 3308881 - 3308794
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagag--aaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    |||||||||||||||||||||||||||||||||| |  ||||||||| | || |||||||  ||||||| |||||||| |||| ||||    
T  3308881 tatgtgaaaatcacttatttagattgaaataaaggggaaaaaagatgcaaaggggtgattctaggtcaaaaattgacctaaaatcacc 3308794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 10237370 - 10237457
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagag--aaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||||||||||||||||||||||||||| |||| |  ||||||||| |||| |||||||  ||||||| |||||||| |||| ||||    
T  10237370 tatgtgaaaatcacttatttagattgaaagaaaggggaaaaaagatgtagaggggtgattctaggtcaaaaattgacctaaaatcacc 10237457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 30923591 - 30923672
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaac 84  Q
    ||||||| ||||||| |||||||||||||||||  ||| ||||||||||||  ||||||||| |||||| |||||||| |||||    
T  30923591 tctatgtaaaaatcatttatttagattgaaata--gagtaaaagatgaagatgggtgatttcgggtcaaaaattgacctaaaac 30923672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 8805828 - 8805781
Alignment:
Q  4 atgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga 51  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||    
T  8805828 atgtgaaaatcacttatttaaattgaaataaagagaaaaatatgaaga 8805781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 37614241 - 37614356
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaa--gatgaagagag-gtgatttcaggtcaagaattgacccaaaaccaccgctcaatga 97  Q
    ||||| ||||||||||||||||||  ||||||| |||||||||  ||||||| ||| ||||||||||||||| |||| | ||||||| ||| |||| |||    
T  37614241 tctatatgaaaatcacttatttag--tgaaatagagagaaaaaaagatgaagcgagagtgatttcaggtcaaaaattaatccaaaactacccctcactga 37614338  T
Q  98 agaaattgtaagggaaaa 115  Q
    ||||| || ||| |||||    
T  37614339 agaaaatggaagagaaaa 37614356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 37 - 138
Target Start/End: Original strand, 9374702 - 9374804
Alignment:
Q  37 agaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaattgtaag-ggaaaaactagggccagcttgttgga 135  Q
    |||||||||||||||  | |||||||| ||||| |||||||||||||||| | ||||||||||||| |  ||| | ||||||||| ||| | ||||||||    
T  9374702 agaaaaagatgaagaatgttgatttcatgtcaaaaattgacccaaaaccatccctcaatgaagaaactagaagagaaaaaactagagccggtttgttgga 9374801  T
Q  136 gaa 138  Q
    |||    
T  9374802 gaa 9374804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 17319287 - 17319208
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaa 82  Q
    ||||||||||||| | ||||||||||||||||| | ||||||| |||| ||| | |||||||||||||| ||||||||||||    
T  17319287 tctatgtgaaaat-agttatttagattgaaatagatagaaaaa-atgaggagggatgatttcaggtcaaaaattgacccaaa 17319208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 23933778 - 23933838
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaa--gagaaaaagatgaagagaggtgattt 61  Q
    ||||||||| |||||||||||||||||||||||  || ||||||||| |||||||||||||    
T  23933778 tatgtgaaagtcacttatttagattgaaataaagggaaaaaaagatgtagagaggtgattt 23933838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 18695012 - 18694961
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagag-aaaaagatgaaga 51  Q
    ||||||| ||||||||||||||||||||||||| |||| |||||||||||||    
T  18695012 tctatgtaaaaatcacttatttagattgaaatagagagaaaaaagatgaaga 18694961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 32197919 - 32197986
Alignment:
Q  9 aaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattga 76  Q
    ||||||| ||||||| |||||||||||||||||||||||||||   |||||||  |||||| ||||||    
T  32197919 aaaatcatttatttatattgaaataaagagaaaaagatgaagatgagtgatttttggtcaaaaattga 32197986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 32448782 - 32448865
Alignment:
Q  6 gtgaaaatcacttatttagattgaaataaa-gagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||||||||||||||||||| |||| ||| | |||||||||| |||| |||||||| |||||||  | ||||| |||||||||    
T  32448782 gtgaaaatcacttatttagatcgaaagaaaggggaaaaagatgcagaggggtgattttaggtcaaataatgacctaaaaccacc 32448865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 14955465 - 14955389
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagag--aaaaagatgaagagaggtgatttcaggtcaagaattgac 77  Q
    |||||| |||||||||||||||||||||| ||||||  ||||||||| |||| | |||||  ||||||| |||||||    
T  14955465 tatgtggaaatcacttatttagattgaaagaaagaggaaaaaagatgcagagggatgattctaggtcaaaaattgac 14955389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 22421700 - 22421659
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaa 42  Q
    ||||||||||| ||||||||||||||||||||| ||||||||    
T  22421700 tctatgtgaaagtcacttatttagattgaaatagagagaaaa 22421659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 12648081 - 12648168
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaa-taaagag-aaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    |||||| ||||||||||||||||||||||  |||||| |||||||||  ||| |||||||  ||||||| || ||||| |||||||||    
T  12648081 tatgtggaaatcacttatttagattgaaagaaaagagaaaaaagatgtggaggggtgattctaggtcaaaaaatgacctaaaaccacc 12648168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 24461379 - 24461294
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagagaaaa-agatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    |||||| |||||||||||||||||||||| ||||||||||  |||| ||||  ||||||  ||||||| || ||||| |||||||||    
T  24461379 tatgtggaaatcacttatttagattgaaa-aaagagaaaacggatgcagaggagtgattctaggtcaaaaaatgacctaaaaccacc 24461294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 120
Target Start/End: Original strand, 31581888 - 31581938
Alignment:
Q  70 gaattgacccaaaaccaccgctcaatgaagaaattgtaagggaaaaactag 120  Q
    ||||||||||||||||||| |||||||||||||  ||||| ||||| ||||    
T  31581888 gaattgacccaaaaccacccctcaatgaagaaacagtaagagaaaacctag 31581938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 39285415 - 39285501
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagag-aaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    |||||||||| |||||||||| | ||||||  |||| |||||||| |||| |||||||||||  ||||  |||||||||||| ||||    
T  39285415 tatgtgaaaaccacttatttaaaatgaaatggagaggaaaaagataaagataggtgatttcaactcaaatattgacccaaaatcacc 39285501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 8308137 - 8308036
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaa--gatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaa 98  Q
    ||||||||||||||||  |||||||||||| || ||| |||||  ||||||||  | | |||||| ||||| | |||| |||||||||||  ||||||||    
T  8308137 tctatgtgaaaatcac--atttagattgaattagagaaaaaaaaagatgaagaaggattatttcaagtcaaaagttgatccaaaaccaccattcaatgaa 8308040  T
Q  99 gaaa 102  Q
    ||||    
T  8308039 gaaa 8308036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 13719284 - 13719328
Alignment:
Q  9 aaaatcacttatttagattgaaataaagagaaaaagatgaagaga 53  Q
    ||||||||||||||| ||||||||  ||||||||||| |||||||    
T  13719284 aaaatcacttatttaaattgaaatggagagaaaaagacgaagaga 13719328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 36943281 - 36943368
Alignment:
Q  4 atgtgaaaatcacttatttagattgaaa-taaagag--aaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    |||||||||  |||||||||||||||||  ||||||  ||||||||| |||| |||||||  ||||||| || ||||| |||||||||    
T  36943281 atgtgaaaactacttatttagattgaaagaaaagaggaaaaaagatgtagagtggtgattctaggtcaaaaaatgacctaaaaccacc 36943368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 93; Significance: 4e-45; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 14464465 - 14464330
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||  |||||||| |    
T  14464465 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaataggggtgatttcaggtcaagaattgacccaaaaccacccttcaatgaaaa 14464366  T
Q  101 aattgtaagggaaaaactagggccagcttgttggaga 137  Q
    ||||||||  | ||||||||||||  |||||||||||    
T  14464365 aattgtaaaag-aaaactagggccgacttgttggaga 14464330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 44907516 - 44907635
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||    
T  44907516 tctatgtgaaaatcacttgtttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtcaagaattgacccaaaaccacccctcaaagaaga 44907615  T
Q  101 aattgtaagggaaaaactag 120  Q
    ||||||| | ||||| ||||    
T  44907616 aattgtaggagaaaacctag 44907635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 12116047 - 12115944
Alignment:
Q  5 tgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaatt 104  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  12116047 tgtgaaaatcacttatttagattgaaataaagaggaaaagatgaagagagatgatttcaggtcaagaattgactcaaaaccacccctcaatgaagaaatt 12115948  T
Q  105 gtaa 108  Q
    ||||    
T  12115947 gtaa 12115944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 36906079 - 36905960
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |  ||||||||||    
T  36906079 tctatgtgaaaatcacttatttatattgaaataaagagaaaaagatgaagaagggtgatttcaggtcaagaattgacccaaaaccatccatcaatgaaga 36905980  T
Q  101 aattgtaagggaaaaactag 120  Q
    ||||||||| ||||| ||||    
T  36905979 aattgtaagagaaaacctag 36905960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 32607425 - 32607306
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaacca-ccgctcaatgaag 99  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||| || ||||||||||    
T  32607425 tctatgtgaaaatcacttatttagattgaaataaagagaaaatgatgaagaggggt-atttcaggtcaagaattgacccaaaaccaccccctcaatgaag 32607327  T
Q  100 aaattgtaagggaaaaactag 120  Q
    |||||||||| ||||| ||||    
T  32607326 aaattgtaagagaaaatctag 32607306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 25631644 - 25631763
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||| | |||||| ||||||| |||||||||||||||||| |||||||||||    
T  25631644 tctatgtgaaaatcacttatttagattgaaatagagagaaaaagatggagagggatgattttaggtcaaaaattgacccaaaaccacccctcaatgaaga 25631743  T
Q  101 aattgtaagggaaaaactag 120  Q
    ||| ||||| ||||| ||||    
T  25631744 aatagtaagagaaaacctag 25631763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 46934600 - 46934499
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||| |||||||| ||||||||| |||||||||||    
T  46934600 tctatgtgaaaatcacttatttagattgaaatagagagagaaagatgaagaggggtgatttcaggtcaaaaattgaccaaaaaccacccctcaatgaaga 46934501  T
Q  101 aa 102  Q
    ||    
T  46934500 aa 46934499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 35499318 - 35499426
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga-gaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaag 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| || |||||||| ||||||||| ||||||||||    
T  35499318 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagggggtgatttcaggtaaaaaattgaccaaaaaccacccctcaatgaag 35499417  T
Q  100 aaattgtaa 108  Q
    || ||||||    
T  35499418 aatttgtaa 35499426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 7 - 102
Target Start/End: Complemental strand, 4178516 - 4178421
Alignment:
Q  7 tgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaa 102  Q
    ||||||||||||||||||||||||||| |||||||||||||||||  |||||||| |||||||||||||||||||||||||| |||||||||||||    
T  4178516 tgaaaatcacttatttagattgaaatagagagaaaaagatgaagatgggtgattttaggtcaagaattgacccaaaaccacccctcaatgaagaaa 4178421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 38440694 - 38440801
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||  ||||||||||||||||||||||| ||||||||||  ||||||||||    
T  38440694 tctatgtgaaaatcacttatttagattgaaatagagagaaaaagataaagaggagtgatttcaggtcaagaattgactcaaaaccaccattcaatgaaga 38440793  T
Q  101 aattgtaa 108  Q
    || |||||    
T  38440794 aactgtaa 38440801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 38855154 - 38855272
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||  ||||||||| ||||||||||||||| |||||||||||    
T  38855154 tctatgtgaaaatcacttatttagattgatatagagagaaaaagatgaagaggggtgattttcggtcaagaa-tgacccaaaaccacccctcaatgaaga 38855252  T
Q  101 aattgtaagggaaaaactag 120  Q
    ||| ||||| ||||| ||||    
T  38855253 aatagtaagagaaaacctag 38855272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 39917513 - 39917632
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    |||||||||||||||||||||||||||||| || ||||||||| |||||||  | ||||||||||||||||||||||||||||||||  |||| ||||||    
T  39917513 tctatgtgaaaatcacttatttagattgaattagagagaaaaatatgaagatggatgatttcaggtcaagaattgacccaaaaccactcctcagtgaaga 39917612  T
Q  101 aattgtaagggaaaaactag 120  Q
    || |||||||||||| ||||    
T  39917613 aactgtaagggaaaacctag 39917632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 50611534 - 50611635
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||| |||||||||||||||| | |||||||||||    
T  50611534 tctatatgaaaatcacttatttagattgaaatatagagaaaaagatgaagaggggtgattttaggtcaataattgacccaaaaccatctctcaatgaaga 50611633  T
Q  101 aa 102  Q
    ||    
T  50611634 aa 50611635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 3850572 - 3850659
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  3850572 tctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagaggggtgatttcaggtcaagaattgatccaaaaccacc 3850659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 49552343 - 49552441
Alignment:
Q  4 atgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaa 102  Q
    |||||||| ||||||||||||||||||||| ||| |||| ||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||    
T  49552343 atgtgaaattcacttatttagattgaaatagagaaaaaatgatgaagaggggtgatttcaggtcaagaattgacccaaaaccacccatcaatgaagaaa 49552441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 4172524 - 4172423
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||  | |||||| | || ||||||||||||||||||||| |||||||||||    
T  4172524 tctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagatggatgattttatgttaagaattgacccaaaaccacccctcaatgaaga 4172425  T
Q  101 aa 102  Q
    ||    
T  4172424 aa 4172423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 2342447 - 2342336
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaa 102  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| | ||| |||||||  |||||||||||||||||||| ||||| |||||||    
T  2342447 tatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagagggttga-ttcaggtttagaattgacccaaaaccacccctcaacgaagaaa 2342349  T
Q  103 ttgtaagggaaaa 115  Q
     |||||| |||||    
T  2342348 ctgtaagagaaaa 2342336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 25162393 - 25162275
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||  ||||||||||  |||||||||||| |||||||||| |||| ||||||    
T  25162393 tctatgtgaaa-tcacttatttagattgaaatagagagaaaaagatgaagatgggtgatttcaaatcaagaattgacacaaaaccacccctcagtgaaga 25162295  T
Q  101 aattgtaagggaaaaactag 120  Q
    || |||||| ||||| ||||    
T  25162294 aactgtaagagaaaacctag 25162275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 29503420 - 29503333
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||||||||||||| ||||||||||||||||| ||||||||| |||||||  |||||||||||||||||||||||||||||| ||||    
T  29503420 tctatgtgaaaatcaattatttagattgaaatatagagaaaaatatgaagatgggtgatttcaggtcaagaattgacccaaaatcacc 29503333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 51202384 - 51202480
Alignment:
Q  19 atttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaattgtaagggaaaa 115  Q
    ||||||||||||||| ||||||||| |||||||  |||||||||||||||||||||||||||||| |||| |||||| |||||| |||||| |||||    
T  51202384 atttagattgaaatagagagaaaaatatgaagatgggtgatttcaggtcaagaattgacccaaaatcacccctcaataaagaaactgtaagagaaaa 51202480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 37169189 - 37169087
Alignment:
Q  1 tctatgtgaaaa-tcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaag 99  Q
    |||||||||||| ||||||||||| |||||| || |||||||||| ||||||||||||||||||||| || |||||| |||||| |||| ||||||||||    
T  37169189 tctatgtgaaaaatcacttatttatattgaattagagagaaaaaggtgaagagaggtgatttcaggtaaaaaattgatccaaaatcacccctcaatgaag 37169090  T
Q  100 aaa 102  Q
    |||    
T  37169089 aaa 37169087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 22802971 - 22802892
Alignment:
Q  9 aaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||||||||||||||||||||||| ||||||||||||||||||  ||||||||| ||||| ||||||||||||| ||||    
T  22802971 aaaatcacttatttagattgaaatagagagaaaaagatgaagaggagtgatttcatgtcaaaaattgacccaaaatcacc 22802892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 36735277 - 36735370
Alignment:
Q  9 aaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaa 102  Q
    ||||||||||||||| ||||||||| ||||| ||| |||||||| | ||||||||||| || |||||||| ||||||||| |||||||||||||    
T  36735277 aaaatcacttatttaaattgaaatatagagagaaaaatgaagagggatgatttcaggtaaaaaattgaccaaaaaccacctctcaatgaagaaa 36735370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 46178535 - 46178447
Alignment:
Q  1 tctatgtgaaaat-cacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||||||||||  ||||||||||||||||| || |||||||||||||||||| | |||||||||||||  ||||||||||||||||||    
T  46178535 tctatgtgaaaaagcacttatttagattgaattagagagaaaaagatgaagagggatgatttcaggtcataaattgacccaaaaccacc 46178447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 17237760 - 17237673
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||    |||||| |||||||||||||||| | |||||||    
T  17237760 tctatgtgaaaatcacttatttagattgaaatagagagaaacagatgaagatgaatgattttaggtcaagaattgacctagaaccacc 17237673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 21488069 - 21487993
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgac 77  Q
    |||| |||||| ||||||||||||||||||||  |||||||||||||||||  |||||||||||||||| |||||||    
T  21488069 tctacgtgaaagtcacttatttagattgaaatggagagaaaaagatgaagattggtgatttcaggtcaaaaattgac 21487993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 31794037 - 31793924
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||||||||||||||||| ||| |||| ||  ||||||| |||||| |||| || || |||| ||||||||||  ||||| ||||    
T  31794037 tctatgtgaaaatcacttatttagattgaaatagagaaaaaatgacaaagagagatgatttaaggttaa-aaatgactcaaaaccacccgtcaataaaga 31793939  T
Q  101 aattgtaagggaaaa 115  Q
    || || ||| |||||    
T  31793938 aactggaagagaaaa 31793924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 55 - 120
Target Start/End: Original strand, 47980839 - 47980904
Alignment:
Q  55 gtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaattgtaagggaaaaactag 120  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||| || ||| ||||| ||||    
T  47980839 gtgatttcaggtcaaaaattgacccaaaaccaccactcaatgaagaaactgcaagagaaaacctag 47980904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 55 - 120
Target Start/End: Original strand, 47990126 - 47990191
Alignment:
Q  55 gtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaattgtaagggaaaaactag 120  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||| || ||| ||||| ||||    
T  47990126 gtgatttcaggtcaaaaattgacccaaaaccaccactcaatgaagaaactgcaagagaaaacctag 47990191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 55 - 120
Target Start/End: Original strand, 47999413 - 47999478
Alignment:
Q  55 gtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaattgtaagggaaaaactag 120  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||| || ||| ||||| ||||    
T  47999413 gtgatttcaggtcaaaaattgacccaaaaccaccactcaatgaagaaactgcaagagaaaacctag 47999478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 55 - 120
Target Start/End: Original strand, 48008700 - 48008765
Alignment:
Q  55 gtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaattgtaagggaaaaactag 120  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||| || ||| ||||| ||||    
T  48008700 gtgatttcaggtcaaaaattgacccaaaaccaccactcaatgaagaaactgcaagagaaaacctag 48008765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 6823553 - 6823599
Alignment:
Q  40 aaaagatgaagagaggtgatttcaggtcaagaattgacccaaaacca 86  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||    
T  6823553 aaaagatgaagaggggtgatttcagatcaagaattgacccaaaacca 6823599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 42719472 - 42719406
Alignment:
Q  7 tgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaat 73  Q
    ||||||||||||||||| ||||||||| ||||||||| | |||||   |||||||||||||||||||    
T  42719472 tgaaaatcacttatttaaattgaaatagagagaaaaatacgaagatgagtgatttcaggtcaagaat 42719406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 9797686 - 9797784
Alignment:
Q  4 atgtgaaaatcacttatttagattgaaa-taaagag---aaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaa 98  Q
    ||||||||| ||||||||||||||||||  ||||||   ||||||||| |||| |||||||  ||||||| || ||||| ||||||||| |||||||||    
T  9797686 atgtgaaaaccacttatttagattgaaagaaaagagaaaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccacctctcaatgaa 9797784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 50194440 - 50194526
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaata-aagagaaaaa-gatgaagagaggtgatttcaggtcaagaattgacccaaaaccac 87  Q
    |||||| |||||||||||||||||||||| | ||| |||||| |||| ||||||||||||| ||||||| || ||| | ||||||||    
T  50194440 tatgtggaaatcacttatttagattgaaagagaagggaaaaaggatgcagagaggtgattttaggtcaaaaaatgatctaaaaccac 50194526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 19605993 - 19605908
Alignment:
Q  17 ttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaa 102  Q
    |||||| |||||||||| || |||||| |||||||  || ||||||| ||||| | ||||||||||| ||||  ||||||||||||    
T  19605993 ttatttggattgaaatagagtgaaaaatatgaagaagggcgatttcatgtcaacatttgacccaaaatcacccttcaatgaagaaa 19605908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 29249175 - 29249099
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagag-aaaaagatgaagagaggtgatttcaggtcaagaattgacc 78  Q
    |||||||||| ||||||||||||| |||  |||||| ||||||||||||||| ||||||  ||||||| || |||||    
T  29249175 tatgtgaaaaacacttatttagatcgaacgaaagaggaaaaagatgaagagaagtgattctaggtcaaaaagtgacc 29249099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 33579800 - 33579713
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaa--gagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||||||||||||||||||||||||||| |||  |  ||||||||| |||| |||||||  ||||||| || ||||  |||||||||    
T  33579800 tatgtgaaaatcacttatttagattgaaagaaaatggaaaaaagatgtagaggggtgattctaggtcaaaaaatgacttaaaaccacc 33579713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 54148920 - 54148833
Alignment:
Q  4 atgtgaaaatcacttatttagattgaaa-taaagag--aaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||||||| ||||||||||||||||||  ||||||  ||||||||| |||| |||||||  ||||||| || ||||| |||||||||    
T  54148920 atgtgaaaaccacttatttagattgaaagaaaagaggaaaaaagatgtagaggggtgattgtaggtcaaaaaatgacctaaaaccacc 54148833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 29921985 - 29921903
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagag--aaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaa 83  Q
    |||||| |||||||||||||||||||||| |||| |  ||||||||| ||||| ||||||| || |||| || ||||| ||||    
T  29921985 tatgtggaaatcacttatttagattgaaagaaaggggaaaaaagatggagagaagtgattttagctcaaaaaatgacctaaaa 29921903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 29971138 - 29971056
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagag--aaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaa 83  Q
    |||||| |||||||||||||||||||||| |||| |  ||||||||| ||||| ||||||| || |||| || ||||| ||||    
T  29971138 tatgtggaaatcacttatttagattgaaagaaaggggaaaaaagatggagagaagtgattttagctcaaaaaatgacctaaaa 29971056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 6913263 - 6913321
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgat 59  Q
    |||||||||||||||| ||| |||||||||| | ||||||| ||||||| || ||||||    
T  6913263 tctatgtgaaaatcacctatctagattgaaacatagagaaagagatgaaaaggggtgat 6913321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 21289977 - 21290063
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagag-aaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||| |||||||||||||| |||||||| || | | ||||||||| |||| |||||||  ||||||| |||||||| |||| ||||    
T  21289977 tatgttaaaatcacttatttggattgaaagaaggggaaaaaagatgcagaggggtgattctaggtcaaaaattgacctaaaatcacc 21290063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 47042208 - 47042296
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaa---gagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||||||||||||||||||| ||||||| |||   || ||||||||| |||| |||||||  |||| || || ||||| |||||||||    
T  47042208 tatgtgaaaatcacttatttaaattgaaagaaaagggaaaaaaagatgtagaggggtgattataggttaaaaaatgacctaaaaccacc 47042296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 21431556 - 21431470
Alignment:
Q  4 atgtgaaaatcacttatttagattgaaataaa---gagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||||||| |||||||||||||||||| |||   |  ||||||||| |||| |||||||| ||||||| || ||||| |||||||||    
T  21431556 atgtgaaaaccacttatttagattgaaagaaaatgggaaaaaagatgtagaggggtgattttaggtcaa-aaatgacctaaaaccacc 21431470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 51303796 - 51303871
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagag--aaaaagatgaagagaggtgatttcaggtcaagaattgac 77  Q
    |||||||||||||||||||| |||||||| |||| |  ||||||||| |||| |||||||  ||||||| |||||||    
T  51303796 tatgtgaaaatcacttatttggattgaaaaaaaggggaaaaaagatgcagag-ggtgattctaggtcaaaaattgac 51303871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 3606716 - 3606616
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaacca-ccgctcaatgaagaa 101  Q
    ||||| ||||||||||||||||||| |||||  |||||| ||| |||||   |||||||||| | || ||||||| ||||  || || ||||||||||||    
T  3606716 tatgttaaaatcacttatttagattaaaatagggagaaagagaagaagattagtgatttcagataaaaaattgacacaaatgcaccctctcaatgaagaa 3606617  T
Q  102 a 102  Q
    |    
T  3606616 a 3606616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 31
Target Start/End: Complemental strand, 7546544 - 7546516
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaa 31  Q
    |||||||||||||||||||||||||||||    
T  7546544 tatgtgaaaatcacttatttagattgaaa 7546516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 40957010 - 40957050
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagagaaaaa 43  Q
    ||||| |||| |||||||||||||||||| |||||||||||    
T  40957010 tatgtaaaaaccacttatttagattgaaagaaagagaaaaa 40957050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 51923661 - 51923629
Alignment:
Q  4 atgtgaaaatcacttatttagattgaaataaag 36  Q
    |||||||||||||||||||||||||||| ||||    
T  51923661 atgtgaaaatcacttatttagattgaaagaaag 51923629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 4e-45; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 19716014 - 19716121
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||    
T  19716014 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagag-ggtgatttcagatcaagaattgacccaaaaccacctctcaatgaaga 19716112  T
Q  101 aattgtaag 109  Q
    |||||||||    
T  19716113 aattgtaag 19716121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 50272257 - 50272392
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||  ||||||||||    
T  50272257 tctatgtgaaaattacttatttagattgaaataaagagaaaaagatgaataggggtgatttcaggtcaagaattgacccaaaaccacccttcaatgaaga 50272356  T
Q  101 aattgtaagggaaaaactagggccagcttgttggaga 137  Q
    ||||||||| | |||||||||| |  |||||||||||    
T  50272357 aattgtaagag-aaaactagggtcgacttgttggaga 50272392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 30879039 - 30878925
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||| |||||||||||    
T  30879039 tctatgtgaaaatcacttatttagattaaaataaagagaaaaagatgaagagagatgatctcaggtcaaaaattgacccaaaaccacccctcaatgaaga 30878940  T
Q  101 aattgtaagggaaaa 115  Q
    ||||||||| |||||    
T  30878939 aattgtaagagaaaa 30878925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 25728076 - 25728184
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||  ||| ||||||    
T  25728076 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggagtgatttcaggtcaagaattgacccaaaaccacccgtcattgaaga 25728175  T
Q  101 aattgtaag 109  Q
    |||||||||    
T  25728176 aattgtaag 25728184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 35584738 - 35584857
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||| |||||||||||||||| |||| |||||||||||    
T  35584738 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagatgagtgatttcaggttaagaattgacccaaaatcacccctcaatgaaga 35584837  T
Q  101 aattgtaagggaaaaactag 120  Q
    ||||||||| ||||| ||||    
T  35584838 aattgtaagagaaaacctag 35584857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 40646652 - 40646533
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||   ||||||| |||||||||||||||||||||||||| |||||||||||    
T  40646652 tctacgtgaaaatcacttatttagattgaaataaatagaaaaagatgaagatgagtgattttaggtcaagaattgacccaaaaccacccctcaatgaaga 40646553  T
Q  101 aattgtaagggaaaaactag 120  Q
    ||||||||| ||||| ||||    
T  40646552 aattgtaagagaaaacctag 40646533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 5701221 - 5701107
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||  |||| |||||| ||||    
T  5701221 tctatgtgaaaatcacttatttaaattgaaataaagagaaaaagatgaagaggggtgatttcaggtcaagtattgacccaaagtcacccctcaataaaga 5701122  T
Q  101 aattgtaagggaaaa 115  Q
    ||||||||| |||||    
T  5701121 aattgtaagagaaaa 5701107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 18569427 - 18569546
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||  ||||| |||||||||||||||||| |||||||||||    
T  18569427 tctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagacaggtgatttcttgtcaaaaattgacccaaaaccacccctcaatgaaga 18569526  T
Q  101 aattgtaagggaaaaactag 120  Q
    || || ||| ||||| ||||    
T  18569527 aactggaagagaaaacctag 18569546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 20266266 - 20266151
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaacca-ccgctcaatgaag 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| || ||||||||||||||||||||| || ||| ||||||    
T  20266266 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagatgggtgattttagatcaagaattgacccaaaaccaccccctcgatgaag 20266167  T
Q  100 aaattgtaagggaaaa 115  Q
    |||||||||| |||||    
T  20266166 aaattgtaagagaaaa 20266151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 3 - 108
Target Start/End: Original strand, 30818464 - 30818569
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaa 102  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||| |||||||||||||| ||| |||||||||||||    
T  30818464 tatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagatgggtgatttcaggtcaataattgacccaaaactacccctcaatgaagaaa 30818563  T
Q  103 ttgtaa 108  Q
     |||||    
T  30818564 ctgtaa 30818569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 51868762 - 51868863
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | |||||||||    
T  51868762 tctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagaggggtgatttcaggtcaagaattaacccaaaaccaccccccaatgaaga 51868861  T
Q  101 aa 102  Q
    ||    
T  51868862 aa 51868863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 5324679 - 5324775
Alignment:
Q  6 gtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaa 102  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| || | |||||||||||||    
T  5324679 gtgaaaatcacttatttagattgaaatagagagaaaaagatgaagagaggtgattccaggtcaagaattgacccaaaatcatccctcaatgaagaaa 5324775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 50148336 - 50148217
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||  | ||||||||| || |||||||||||||||||||| |||||||||||    
T  50148336 tctatgtgaaaatcacttatttagattaaaataaagagaaaaggatgaagatggatgatttcagatctagaattgacccaaaaccacccctcaatgaaga 50148237  T
Q  101 aattgtaagggaaaaactag 120  Q
    |||| |||| ||||| ||||    
T  50148236 aattataagagaaaatctag 50148217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 9172452 - 9172350
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||| ||||||||||||||||||||| ||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| | |||||||||    
T  9172452 tctatgtgaaagtcacttatttagattgaaatagagaaaaaaatatgaagaggggtgatttcaggtcaagaattgacccaaaaccaccccccaatgaaga 9172353  T
Q  101 aat 103  Q
    |||    
T  9172352 aat 9172350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 9180434 - 9180332
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||| ||||||||||||||||||||| ||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| | |||||||||    
T  9180434 tctatgtgaaagtcacttatttagattgaaatagagaaaaaaatatgaagaggggtgatttcaggtcaagaattgacccaaaaccaccccccaatgaaga 9180335  T
Q  101 aat 103  Q
    |||    
T  9180334 aat 9180332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 25406401 - 25406502
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||| |||| | |||||||||    
T  25406401 tctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagaggtgtgatttcaggtcaagaattgacccaaaatcaccccccaatgaaga 25406500  T
Q  101 aa 102  Q
    ||    
T  25406501 aa 25406502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 51871828 - 51871728
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||| | |||||||||    
T  51871828 tctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagaggggtgattttaggtcaagaattgacccaaaaccacc-cccaatgaaga 51871730  T
Q  101 aa 102  Q
    ||    
T  51871729 aa 51871728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 14545484 - 14545393
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctc 92  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||   ||||||||||||||||||||||| ||||||||||||||    
T  14545484 tctatgtgaaaatcacttatttagattgaaatatagagaaaaagatgaagatgagtgatttcaggtcaagaattgacacaaaaccaccgctc 14545393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 28035103 - 28035008
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatg 96  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||   ||||||||||||||| |||||||||||||||||| |||||||    
T  28035103 tctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagatgagtgatttcaggtcaataattgacccaaaaccacctctcaatg 28035008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 40881130 - 40881249
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||||||   ||||||| |||||||||||||||||||||||| | |||||||||||    
T  40881130 tctaagtgaaaatcactcatttagattgaaatagagagaaaaagatgaagatgagtgattttaggtcaagaattgacccaaaaccatccctcaatgaaga 40881229  T
Q  101 aattgtaagggaaaaactag 120  Q
    ||  ||||| ||||| ||||    
T  40881230 aacggtaagagaaaacctag 40881249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 45426179 - 45426281
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaacca-ccgctcaatgaag 99  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||| | |||||||||||  ||||||||||||||||||||| || ||||||||||    
T  45426179 tctatgtgaaaatcacttatttagatttaaatagagagaaaaagatgaaaataggtgatttcaaatcaagaattgacccaaaaccaccccctcaatgaag 45426278  T
Q  100 aaa 102  Q
    |||    
T  45426279 aaa 45426281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 7997751 - 7997659
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctca 93  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||| |||| |||| ||||||||||||| ||||    
T  7997751 tctatgtgaaaatcacttatttatattgaaataaagagaaaaagatgaagaagggtgatttcagatcaaaaattaacccaaaaccacccctca 7997659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 19723297 - 19723179
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaag-atgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaag 99  Q
    |||||||||||||||||||||||||||||| || |||||||||  ||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||    
T  19723297 tctatgtgaaaatcacttatttagattgaa-tagagagaaaaaatatgaagagaggtgatttcaagtcaataattgacccaaaaccacc-ctcaatgaag 19723200  T
Q  100 aaattgtaagggaaaaactag 120  Q
    ||| | |||| ||||| ||||    
T  19723199 aaactataagagaaaacctag 19723179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 33291537 - 33291633
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagagaaaaaga-tgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaa 98  Q
    ||||||||||||||||||||| ||||||||| | ||||||| | ||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  33291537 tatgtgaaaatcacttatttatattgaaatagaaagaaaaaaaatgaagaggggtgatttcaggtcaagaattgacccaaaaccacccctcaatgaa 33291633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 27872703 - 27872616
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||  |||||||||| ||||| ||||||||||||||||||    
T  27872703 tctatgtgaaaatcacttatttagattgaaatagagcgaaaaagatgaagatgggtgatttcatgtcaaaaattgacccaaaaccacc 27872616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 45805928 - 45806013
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||||||| ||||||||||||||||||||| ||||||||||| ||||| |||||||||||| |||| ||||||||||||||||||    
T  45805928 tatgtgaaagtcacttatttagattgaaatagagagaaaaagaggaagaaaggtgatttcagatcaaaaattgacccaaaaccacc 45806013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 7312215 - 7312316
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    |||| |||||||||| |||||||  |||||||| ||||||||||||||||||| || |||| ||||||| |||||||||||||| ||| |||||||||||    
T  7312215 tctacgtgaaaatcatttatttaatttgaaatagagagaaaaagatgaagagaagtaattttaggtcaaaaattgacccaaaactacccctcaatgaaga 7312314  T
Q  101 aa 102  Q
    ||    
T  7312315 aa 7312316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 7342674 - 7342585
Alignment:
Q  13 tcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaa 102  Q
    ||||||||||||||||||||| | | ||||| |||||||| |||||||||||||||| |||||||||||||||||| | |||||||||||    
T  7342674 tcacttatttagattgaaatagataaaaaaatatgaagaggggtgatttcaggtcaaaaattgacccaaaaccaccccccaatgaagaaa 7342585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 50166216 - 50166316
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||| ||||||||||||||||||||| | |||||||||| ||||| ||  |||||||||||| |||||||||||||||||| | |||||||||    
T  50166216 tctatgtgaaattcacttatttagattgaaatagatagaaaaagataaagaggggcaatttcaggtcaataattgacccaaaaccacc-cccaatgaaga 50166314  T
Q  101 aa 102  Q
    ||    
T  50166315 aa 50166316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 38520650 - 38520770
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaacca-ccgctcaatgaag 99  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||   |||||||||||| || |||||| ||||||||| || || |||||||    
T  38520650 tctatgtgaaaatcacttatttagatcgaaatagagagaaaaagatgaagatgagtgatttcaggtaaaaaattgatccaaaaccacccccttaatgaag 38520749  T
Q  100 aaattgtaagggaaaaactag 120  Q
    ||| || ||| ||||| ||||    
T  38520750 aaactgaaagagaaaacctag 38520770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 44637386 - 44637299
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaaga-gaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    |||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| | ||||| ||||||||||||||||||    
T  44637386 tctacgtgaaaatcacttatttagattgaaataaagataaaaaagatgaagagaggtgattttatgtcaa-aattgacccaaaaccacc 44637299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 11453900 - 11453780
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaat--aaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaa 98  Q
    |||||||||||| |||||||||||||||||||  | ||||||||||||||||||| ||||||||| ||||| ||||||||  |||||| | |||||||||    
T  11453900 tctatgtgaaaaccacttatttagattgaaatagagagagaaaaagatgaagaga-gtgatttcaagtcaaaaattgaccagaaaccatccctcaatgaa 11453802  T
Q  99 gaaattgtaagggaaaaactag 120  Q
    |||| || ||| ||||| ||||    
T  11453801 gaaactgaaagagaaaacctag 11453780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 3871373 - 3871285
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga-gaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||||||||||||||||||||||||||||||  ||||| ||||||||| | | ||||||||||| ||||||||| |||||||||||||    
T  3871373 tctatgtgaaaatcacttatttagattgaaattgagagagaaagatgaaaagggggtgatttcagatcaagaattaacccaaaaccacc 3871285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 9919353 - 9919295
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgat 59  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  9919353 tctatgtaaaaatcacttatttagattgaaatagagagaaaaagatgaagaggggtgat 9919295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 16161767 - 16161685
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaa-gag-aaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaa 83  Q
    |||||| |||||||||||||||||||||||||| ||| ||||| ||||||||||||||||  ||||||| |||||||| ||||    
T  16161767 tatgtggaaatcacttatttagattgaaataaaggagaaaaaatatgaagagaggtgattctaggtcaaaaattgacctaaaa 16161685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 39987346 - 39987292
Alignment:
Q  9 aaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttca 63  Q
    ||||||||||||||||||||||  | |||||||||||||||||||||||||||||    
T  39987346 aaaatcacttatttagattgaatcagagagaaaaagatgaagagaggtgatttca 39987292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 48365887 - 48365955
Alignment:
Q  20 tttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||| |||||| | ||||||||||||||||| |||||||||||  |||| ||||||||||||||||||    
T  48365887 tttagtttgaaacagagagaaaaagatgaagataggtgatttcatttcaaaaattgacccaaaaccacc 48365955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 34519097 - 34519054
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaag 44  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  34519097 tctatgtgaaaatcacttatttagattgaaatagagagaaaaag 34519054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 34528650 - 34528568
Alignment:
Q  5 tgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccac 87  Q
    |||| ||||||||||||||||| |||| |||| |||||||||| |||| |||||||  ||||||| || ||||  ||||||||    
T  34528650 tgtggaaatcacttatttagatcgaaagaaagggaaaaagatgcagaggggtgattctaggtcaaaaaatgacataaaaccac 34528568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 49626843 - 49626758
Alignment:
Q  5 tgtgaaaatcacttatttagattgaaataaagag--aaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    |||||||||||||||||||||| |||| |||| |  ||||||||| |||| |||||||| |||||||  | ||||| |||||||||    
T  49626843 tgtgaaaatcacttatttagatagaaagaaaggggaaaaaagatgcagaggggtgattttaggtcaaagaatgacctaaaaccacc 49626758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 29738793 - 29738880
Alignment:
Q  4 atgtgaaaatcacttatttagattgaaataaa---gagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||||||| |||||||||||||||||| |||   | |||||||||| |||| |||||||  |||| || |||||||| |||||||||    
T  29738793 atgtgaaaaccacttatttagattgaaagaaaaaggggaaaaagatgtagaggggtgattctaggtaaaaaattgacctaaaaccacc 29738880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 41081820 - 41081909
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaag-agaaaaagatgaagagaggtgatttcaggtcaagaattga-cccaaaaccacc 88  Q
    |||||| | ||||||||||| |||||||||||  |  |||||||||||||||   ||||||||||||||| |||||| ||||||||||||    
T  41081820 tctatgcgcaaatcacttatatagattgaaatggactagaaaaagatgaagatgagtgatttcaggtcaaaaattgaccccaaaaccacc 41081909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 1742216 - 1742129
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaa--gagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    |||||||||| |||||||||||||||||| |||  | | |||||||| |||| |||||||  ||||||| || ||||| |||||||||    
T  1742216 tatgtgaaaaccacttatttagattgaaagaaaagggggaaaagatggagaggggtgattctaggtcaaaaaatgacctaaaaccacc 1742129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 19052460 - 19052546
Alignment:
Q  12 atcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaa 98  Q
    |||||||||||||| ||||| | |||  |||| |||||||  | ||||||| |||||| |||| ||||||||||||| || ||||||    
T  19052460 atcacttatttagactgaaagagagaacaaaatatgaagattgatgatttcgggtcaaaaatttacccaaaaccacctcttaatgaa 19052546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 31984116 - 31984028
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaa---gagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    |||||||||| ||||||||||||| |||| |||   || ||||||||| ||||||||| ||  ||||||| || ||||| |||||||||    
T  31984116 tatgtgaaaaccacttatttagatcgaaagaaaagggaaaaaaagatgtagagaggtgcttctaggtcaaaaaatgacctaaaaccacc 31984028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 34413247 - 34413307
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaa---gagaaaaagatgaagagaggtgatt 60  Q
    ||||||||||||||||||||||||||||| |||   || ||||||||| |||| |||||||    
T  34413247 tatgtgaaaatcacttatttagattgaaagaaaggggaaaaaaagatgcagaggggtgatt 34413307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 36775873 - 36775931
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagag-aaaaagatgaagagaggtgatt 60  Q
    ||||||||||||| ||||||||||||||| |||| | ||||||||| |||| |||||||    
T  36775873 tatgtgaaaatcatttatttagattgaaagaaagggaaaaaagatgcagaggggtgatt 36775931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 36
Target Start/End: Complemental strand, 48750124 - 48750091
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaag 36  Q
    ||||||||||||||||||||||||||||| ||||    
T  48750124 tatgtgaaaatcacttatttagattgaaagaaag 48750091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 15492226 - 15492182
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagagaaaaagatg 47  Q
    ||||||||||||| ||||||||||||||| |||  ||||||||||    
T  15492226 tatgtgaaaatcatttatttagattgaaagaaatggaaaaagatg 15492182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 18939254 - 18939170
Alignment:
Q  5 tgtgaaaatcacttatttagattgaaataaagag-aaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||||||  ||||||||| ||||||| |||| | ||||||||| ||||||||||||  || |||| || ||||| |||||||||    
T  18939254 tgtgaaaactacttatttaaattgaaagaaaggggaaaaagatgcagagaggtgattctagatcaaaaaatgacctaaaaccacc 18939170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 39927671 - 39927755
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaag-agaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaac 84  Q
    ||||| ||||||| | ||||||||||||||||| |  | || |||||||||||| ||||||||| || || |||||||| |||||    
T  39927671 tctatctgaaaattatttatttagattgaaatagactataacaagatgaagagaagtgatttcatgttaaaaattgaccaaaaac 39927755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 361913 - 362025
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||| |||||||||||||||||||  |||||||||||| |||| |||||||||||||||||||||||| |||||||||| |||||||||||    
T  361913 tctatgtgaaaattacttatttagattgaaata--gagaaaaagatggagaggggtgatttcaggtcaagaattgactcaaaaccacccctcaatgaaga 362010  T
Q  101 aattgtaagggaaaa 115  Q
    || |||||| |||||    
T  362011 aactgtaagagaaaa 362025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 8680 - 8566
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||| || |||||||||| || ||||||| ||||||||||||| |||||||||||    
T  8680 tctatgtgaaaatcacttatttagattgaaatagagataaaaagatgaaaaggggtgatttcaagttaagaattaacccaaaaccacccctcaatgaaga 8581  T
Q  101 aattgtaagggaaaa 115  Q
    || || ||| |||||    
T  8580 aactggaagagaaaa 8566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 64; Significance: 9e-28; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 5356 - 5258
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaa 102  Q
    ||||| ||| |||||||||||||||||| || ||||| |||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||    
T  5356 tatgtaaaagtcacttatttagattgaagtagagagagaaagatgaagaggggtgatttcaggtcaagaattgacccaaaaccacc-cccaatgaagaaa 5258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 64; Significance: 9e-28; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 6295 - 6185
Alignment:
Q  4 atgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaat 103  Q
    ||||||||||||||||||||||||| |||| ||| |||||||||||||| |||||||| ||||||||||||||||  |||||||| |||||||||||||     
T  6295 atgtgaaaatcacttatttagattggaatagagaaaaaaagatgaagaggggtgattttaggtcaagaattgacctgaaaccacc-ctcaatgaagaaac 6197  T
Q  104 tgtaagggaaaa 115  Q
    || ||| |||||    
T  6196 tggaagagaaaa 6185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 16439 - 16526
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||    |||||| |||||||||||||||| | |||||||    
T  16439 tctatgtgaaaatcacttatttagattgaaatagagagaaacagatgaagatgaatgattttaggtcaagaattgacctagaaccacc 16526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 1831 - 1908
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagag--aaaaagatgaagagaggtgatttcaggtcaagaattgacc 78  Q
    ||||||||||||||||||||||||||||| |||| |  ||||||||| ||||||||||||  ||||||| ||||||||    
T  1831 tatgtgaaaatcacttatttagattgaaagaaaggggaaaaaagatgcagagaggtgattctaggtcaaaaattgacc 1908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 201488 - 201534
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatg 47  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  201488 tctatgtgaaaatcacttatttagattgaaatatagagaaaaagatg 201534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 55 - 120
Target Start/End: Complemental strand, 148 - 83
Alignment:
Q  55 gtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaagaaattgtaagggaaaaactag 120  Q
    |||||||||||| ||||||||||||||||||||| ||||||| ||||| |||||| ||||| ||||    
T  148 gtgatttcaggttaagaattgacccaaaaccacccctcaatggagaaactgtaagagaaaagctag 83  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 20511 - 20610
Alignment:
Q  1 tctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccaccgctcaatgaaga 100  Q
    ||||| |||||||||||||||||||||  |||| || |||||||||||  |  |||||||||||||||| |||||| ||||||||||| ||| |||||||    
T  20511 tctatatgaaaatcacttatttagatt-taatagagtgaaaaagatgacaatgggtgatttcaggtcaaaaattga-ccaaaaccacccctcgatgaaga 20608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 58236 - 58323
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaa--gagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    |||||| |||||||||||||||||||||| |||  || |||| |||| |||| |||||||| ||||||| || ||||| |||||||||    
T  58236 tatgtggaaatcacttatttagattgaaagaaaaggaaaaaaggatgcagaggggtgattttaggtcaaaaaatgacctaaaaccacc 58323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 15420 - 15337
Alignment:
Q  7 tgaaaatcacttatttagattgaaataaa--gagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    |||||| |||||||||||||||||| |||  | |||||||||| |||| |||||||  ||||||| || ||||| |||||||||    
T  15420 tgaaaaccacttatttagattgaaagaaaaggggaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccacc 15337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 36804 - 36864
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttca 63  Q
    ||||| ||||||||||||||| ||||||||| |  |||||||||||||| || ||||||||    
T  36804 tatgtaaaaatcacttatttatattgaaatacaacgaaaaagatgaagacagatgatttca 36864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 453891 - 453851
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaataaagagaaaaa 43  Q
    ||||||||||||||||||||| ||| |||||||||||||||    
T  453891 tatgtgaaaatcacttatttaaattaaaataaagagaaaaa 453851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 17405 - 17476
Alignment:
Q  17 ttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||||| |||||||   |||| |||||||||||| |||||||||| | ||||  |||||||||||||||||    
T  17405 ttatttaaattgaaaacgagaggaaaagatgaagaaaggtgatttcggatcaaatattgacccaaaaccacc 17476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 71441 - 71526
Alignment:
Q  3 tatgtgaaaatcacttatttagattgaaa-taaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    |||||||||| ||||| ||||||||||||  |||||| |||| ||| |||| |||||||| ||||||| || ||||| |||||||||    
T  71441 tatgtgaaaaccacttgtttagattgaaagaaaagaggaaaatatgtagaggggtgattttaggtcaa-aaatgacctaaaaccacc 71526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 72021 - 72108
Alignment:
Q  4 atgtgaaaatcacttatttagattgaaataaa---gagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacc 88  Q
    ||||||||| ||||||||| |||||||| |||   | ||||||||||||||  |||||||  ||||||| || ||||| |||||||||    
T  72021 atgtgaaaaccacttatttggattgaaagaaaagggggaaaaagatgaagaatggtgattctaggtcaaaaaatgacctaaaaccacc 72108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University