View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19530_low_163 (Length: 249)
Name: NF19530_low_163
Description: NF19530
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19530_low_163 |
 | |
|
| [»] scaffold0240 (1 HSPs) |
| | |
|
| [»] scaffold0627 (1 HSPs) |
| | |
|
| [»] scaffold0042 (1 HSPs) |
| | |
|
| [»] scaffold0188 (1 HSPs) |
| | |
|
| [»] scaffold0047 (1 HSPs) |
| | |
|
| [»] scaffold0005 (2 HSPs) |
| | |
|
| [»] scaffold0158 (1 HSPs) |
| | |
|
Alignment Details
Target: chr1 (Bit Score: 183; Significance: 4e-99; HSPs: 7)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 16 - 234
Target Start/End: Original strand, 8046548 - 8046766
Alignment:
| Q |
16 |
ataggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatac |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8046548 |
ataggattgggatgagacataatgtctcagtgagttctacctaatcctagactataggtaacctcggggaaaacctatggtcaccacgtgtctacaatac |
8046647 |
T |
|
| Q |
116 |
aacctggcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcatactagannnnnnnngaatggtttttcagagtttcatgtatagtta |
215 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
8046648 |
aacctgacggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcatactagattttttttgaatggttttttagagtttcatgtatagtta |
8046747 |
T |
|
| Q |
216 |
tcaaattgactatattatt |
234 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
8046748 |
tcaaattgactatattatt |
8046766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 23308853 - 23308699
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatacaa |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
23308853 |
aggattgggatgagacataatgtctcagtgagttctacctagtcctaggctataggtaaccttgggggaaacctatggtcaccatgtgtctacaatacaa |
23308754 |
T |
|
| Q |
118 |
cctggcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcatac |
172 |
Q |
| |
|
|||| |||||||||||||||||||||| ||||||| ||||||||| |||||||| |
|
|
| T |
23308753 |
cctgacggttgattatacgtgtgtggaacatgcttacctagacggttgtgcatac |
23308699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 18 - 176
Target Start/End: Complemental strand, 24058498 - 24058340
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatacaa |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
24058498 |
aggattgggatgagacataatgtctcagtgagttctacctaatcccaggctataggtgacctcggggaaaacctagggtcaccacgtgtctacaatacaa |
24058399 |
T |
|
| Q |
118 |
cctggcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcatactaga |
176 |
Q |
| |
|
|||| || ||||||||||||||||||| |||||| ||||||||||||||||||||| |
|
|
| T |
24058398 |
cctgccgattgattatacgtgtgtggaatatgcttacttagacggtcgtgcatactaga |
24058340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 18 - 176
Target Start/End: Complemental strand, 43517245 - 43517088
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatacaa |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||| ||||| |
|
|
| T |
43517245 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcgggggaaacctagggttaccacgtgtctacattacaa |
43517146 |
T |
|
| Q |
118 |
cctggcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcatactaga |
176 |
Q |
| |
|
|||| ||||||||||||||||||| | | |||||| ||||||||| |||||||||||| |
|
|
| T |
43517145 |
cctgccggttgattatacgtgtgt-gcgcttgcttgcctagacggttgtgcatactaga |
43517088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 18 - 144
Target Start/End: Complemental strand, 10216602 - 10216476
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatacaa |
117 |
Q |
| |
|
||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
10216602 |
aggattgggatgagacacaatgtcttagtgagttctacctaatcctaggctataggtaacctcggggaaaacctagggtcaccacgtgtctacaatacaa |
10216503 |
T |
|
| Q |
118 |
cctggcggttgattatacgtgtgtgga |
144 |
Q |
| |
|
| || ||||||||||||||||||||| |
|
|
| T |
10216502 |
cgtgatggttgattatacgtgtgtgga |
10216476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 24090896 - 24090819
Alignment:
| Q |
99 |
ccacgtgtctacaatacaacctggcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcatactaga |
176 |
Q |
| |
|
||||||||||| ||||||| ||| ||||||||||||||||||||| | |||||| ||||||||||||||| |||||| |
|
|
| T |
24090896 |
ccacgtgtctagaatacaatctgtcggttgattatacgtgtgtgggtaatgctttcctagacggtcgtgcacactaga |
24090819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 7064032 - 7064072
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctaccta |
58 |
Q |
| |
|
|||||| || ||||||||||||||||||||||||| ||||| |
|
|
| T |
7064032 |
aggattagggtgagacataatgtctcagtgagttccaccta |
7064072 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 133; Significance: 3e-69; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 16 - 176
Target Start/End: Complemental strand, 19664 - 19504
Alignment:
| Q |
16 |
ataggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatac |
115 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
19664 |
ataggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctagggtcaccacgtgtctacaatac |
19565 |
T |
|
| Q |
116 |
aacctggcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcatactaga |
176 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||| ||| ||||||||| |||||||||||| |
|
|
| T |
19564 |
aacctgtcggttgattatacgtgtgtggagcattcttacctagacggtagtgcatactaga |
19504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 18 - 176
Target Start/End: Complemental strand, 21339191 - 21339032
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctc-ggggaaaacctatggtcaccacgtgtctacaataca |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||| |
|
|
| T |
21339191 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcgggggaaaacctagggtcaccacatgtctacaataca |
21339092 |
T |
|
| Q |
117 |
acctggcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcatactaga |
176 |
Q |
| |
|
||||| |||||||||||||||||||||| | ||||| | |||||||||||||||||||| |
|
|
| T |
21339091 |
acctgacggttgattatacgtgtgtggagcttgcttacccagacggtcgtgcatactaga |
21339032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 18 - 170
Target Start/End: Complemental strand, 16879108 - 16878959
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatacaa |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
16879108 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggg--aaacctatggtcaccacgtgtctacaatacaa |
16879011 |
T |
|
| Q |
118 |
cctggcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcat |
170 |
Q |
| |
|
||| ||||||||||||||||||| || | |||||| |||||||||||||||| |
|
|
| T |
16879010 |
cctaccggttgattatacgtgtgt-gagcttgcttgcctagacggtcgtgcat |
16878959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 18 - 170
Target Start/End: Complemental strand, 16991241 - 16991092
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatacaa |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
16991241 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggg--aaacctatggtcaccacgtgtctacaatacaa |
16991144 |
T |
|
| Q |
118 |
cctggcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcat |
170 |
Q |
| |
|
||| ||||||||||||||||||| || | |||||| |||||||||||||||| |
|
|
| T |
16991143 |
cctaccggttgattatacgtgtgt-gagcttgcttgcctagacggtcgtgcat |
16991092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 22827026 - 22827179
Alignment:
| Q |
22 |
ttgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatacaacctg |
121 |
Q |
| |
|
|||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||| |
|
|
| T |
22827026 |
ttgggatgagacatgatgtctcaatgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccaagtgtctaaaatagaacctg |
22827125 |
T |
|
| Q |
122 |
gcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcatactaga |
176 |
Q |
| |
|
| |||||||||||||||||||| | ||||| |||||||||||||||||||||| |
|
|
| T |
22827126 |
gtcgttgattatacgtgtgtgga-cttgcttacctagacggtcgtgcatactaga |
22827179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 21889115 - 21889016
Alignment:
| Q |
19 |
ggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatacaac |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
21889115 |
ggattgggatgagacataatgtctcagtgagttctacctaatcctaggctgtaggtaacctcggggaaaacctagggtcaccacgtgtctgcaatacaac |
21889016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 142
Target Start/End: Complemental strand, 29791435 - 29791311
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaa-tcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaataca |
116 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||| ||||||| ||| ||||||||||| ||||||| |
|
|
| T |
29791435 |
aggaatgggatgagacataatgtctcagtgagttctacctaagccctaggctagaggtaaccttgggg-aaacctacggttaccacgtgtctgcaataca |
29791337 |
T |
|
| Q |
117 |
acctggcggttgattatacgtgtgtg |
142 |
Q |
| |
|
|| ||||||||||||||||||| |
|
|
| T |
29791336 |
actgattggttgattatacgtgtgtg |
29791311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 123; Significance: 3e-63; HSPs: 9)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 18 - 176
Target Start/End: Original strand, 21165010 - 21165168
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatacaa |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| || |
|
|
| T |
21165010 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggcaataggtaacctcggggaaaacctatggtcaccacgtgtttacaatagaa |
21165109 |
T |
|
| Q |
118 |
cctggcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcatactaga |
176 |
Q |
| |
|
||| |||||| |||||||||||||| |||||||| |||||||||||||||||||||| |
|
|
| T |
21165110 |
tctgacggttggttatacgtgtgtgggtcatgctttcctagacggtcgtgcatactaga |
21165168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 22752122 - 22752278
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatacaa |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||| ||||||| ||||||||||||||||||| |||| |
|
|
| T |
22752122 |
aggattgggatgagacataatgtctcagtgagttctacctaatcttaggttgtaggtaacctcgggg-aaacctacggtcaccacgtgtctacaacacaa |
22752220 |
T |
|
| Q |
118 |
cctggcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcatactag |
175 |
Q |
| |
|
|| | |||||||||||||||||||| ||||| | ||||||||||||||||||||| |
|
|
| T |
22752221 |
ccattcagttgattatacgtgtgtggaacatgcatacctagacggtcgtgcatactag |
22752278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 171
Target Start/End: Original strand, 21493281 - 21493428
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatacaa |
117 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||| |||||||| |||||||||| |||| |
|
|
| T |
21493281 |
aggattgggttgagacataatgtctcagtgagttctacctaatcttaggctatagacgacctcggg--aaacctacggtcaccatgtgtctacaacacaa |
21493378 |
T |
|
| Q |
118 |
cctggcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcata |
171 |
Q |
| |
|
|| ||||||||| ||||||| | ||||||| ||||||| ||||||||| |
|
|
| T |
21493379 |
ccattcggttgatt----gtgtgtgaaacatgcttacctagacgatcgtgcata |
21493428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 142
Target Start/End: Complemental strand, 21218354 - 21218235
Alignment:
| Q |
23 |
tgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatacaacctgg |
122 |
Q |
| |
|
||||||||||||||| |||||||||||||||| ||| ||||||||| |||||| ||||||| || || ||| || ||||| ||||||||||||| |
|
|
| T |
21218354 |
tgggatgagacataacgtctcagtgagttctatctagccctaggctagaggtaatctcgggggaagattacggttacaacgtgactacaatacaaccgat |
21218255 |
T |
|
| Q |
123 |
cggttgattatacgtgtgtg |
142 |
Q |
| |
|
| ||||||||||||||||| |
|
|
| T |
21218254 |
tgattgattatacgtgtgtg |
21218235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 142
Target Start/End: Complemental strand, 21231629 - 21231510
Alignment:
| Q |
23 |
tgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatacaacctgg |
122 |
Q |
| |
|
||||||||||||||| |||||| |||||||||| || |||||||| |||||||||| ||| ||| || ||| |||||||||||||||||||| | |
|
|
| T |
21231629 |
tgggatgagacataacgtctcaatgagttctacttagccctaggcttgaggtaacctcaggggaaaaatacggttaccacgtgtctacaatacaatcgat |
21231530 |
T |
|
| Q |
123 |
cggttgattatacgtgtgtg |
142 |
Q |
| |
|
|||||||||||| |||||| |
|
|
| T |
21231529 |
tggttgattatacatgtgtg |
21231510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 1069445 - 1069397
Alignment:
| Q |
186 |
aatggtttttcagagtttcatgtatagttatcaaattgactatattatt |
234 |
Q |
| |
|
|||||||||| | | |||||||||||||||||||||||||||||||||| |
|
|
| T |
1069445 |
aatggttttttacaatttcatgtatagttatcaaattgactatattatt |
1069397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 41527884 - 41527948
Alignment:
| Q |
21 |
attgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaa |
86 |
Q |
| |
|
|||||| ||||||| ||||||||||||||||| |||| |||||||||| |||| || ||||||||| |
|
|
| T |
41527884 |
attggggtgagacaaaatgtctcagtgagttccacct-atcctaggctgtaggcaatctcggggaa |
41527948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 49
Target Start/End: Complemental strand, 16080241 - 16080210
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgag |
49 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
16080241 |
aggattgggatgagacataatgtctcagtgag |
16080210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 22301886 - 22301926
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctaccta |
58 |
Q |
| |
|
|||||||||||||||||| |||||| ||||||||| ||||| |
|
|
| T |
22301886 |
aggattgggatgagacatgatgtcttagtgagttccaccta |
22301926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 119; Significance: 7e-61; HSPs: 17)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 18 - 176
Target Start/End: Complemental strand, 15562395 - 15562238
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatacaa |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||| |
|
|
| T |
15562395 |
aggattgggatgagacataatgtctcagtgagttctacctgatcctaggctataggtaaccttgggggaaacctagggtcaccacgtgtctacaatacaa |
15562296 |
T |
|
| Q |
118 |
cctggcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcatactaga |
176 |
Q |
| |
|
|||| ||||||||||||||||||||| | |||||| |||||||||||||||||||||| |
|
|
| T |
15562295 |
cctgccggttgattatacgtgtgtgg-gcttgcttgcctagacggtcgtgcatactaga |
15562238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 39888113 - 39888268
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatacaa |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
39888113 |
aggattgggatgagacataatgtctcagtgagttctacccaatcctaggctataggtaacctcgggg-aaacctatggtcaccacgtgtctacaatacaa |
39888211 |
T |
|
| Q |
118 |
cctggcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcatactag |
175 |
Q |
| |
|
|||| ||||||||||||||||||||| | ||||| ||||||||| ||||||||||| |
|
|
| T |
39888212 |
cctgccggttgattatacgtgtgtgg-gcttgctttcctagacggttgtgcatactag |
39888268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 18 - 173
Target Start/End: Original strand, 10827319 - 10827464
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatacaa |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||| | |
|
|
| T |
10827319 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcgggg-aaacctagggtcacca---------aatacta |
10827408 |
T |
|
| Q |
118 |
cctggcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcatact |
173 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
10827409 |
cctgtcggttgattatacgtgtgtggatcatgcttacctagacggtcgtgcatact |
10827464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 18 - 173
Target Start/End: Original strand, 11021111 - 11021256
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatacaa |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||| | |
|
|
| T |
11021111 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcgggg-aaacctagggtcacca---------aatacta |
11021200 |
T |
|
| Q |
118 |
cctggcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcatact |
173 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
11021201 |
cctgtcggttgattatacgtgtgtggatcatgcttacctagacggtcgtgcatact |
11021256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 140
Target Start/End: Complemental strand, 17147970 - 17147846
Alignment:
| Q |
16 |
ataggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatac |
115 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || ||||||| ||||||||| |||||||||||| |
|
|
| T |
17147970 |
ataggattgggatgagacataatgtctcagtgagttctacctaatcctatgctataagtaacctcgagggaaacctagggtcaccacatgtctacaatac |
17147871 |
T |
|
| Q |
116 |
aacctggcggttgattatacgtgtg |
140 |
Q |
| |
|
|||| |||||||||||||||||| |
|
|
| T |
17147870 |
aaccaaacggttgattatacgtgtg |
17147846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 142
Target Start/End: Complemental strand, 11245895 - 11245765
Alignment:
| Q |
13 |
aatataggattgggatgagacataatgtctcagtgagttctacctaatcc-taggctataggtaacctcggggaaaacctatggtcaccacgtgtctaca |
111 |
Q |
| |
|
|||| |||| ||||| ||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||| ||| ||||| |||||||| |
|
|
| T |
11245895 |
aataaaggaatgggaggagacataatgtctcagtgagttctacctaagccctaggctagaggtaacctcggggaaaacctacggttaccacatgtctaca |
11245796 |
T |
|
| Q |
112 |
atacaacctggcggttgattatacgtgtgtg |
142 |
Q |
| |
|
|||||||| | ||||||| ||||||||||| |
|
|
| T |
11245795 |
atacaaccggttggttgatgatacgtgtgtg |
11245765 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 142
Target Start/End: Complemental strand, 11246340 - 11246210
Alignment:
| Q |
13 |
aatataggattgggatgagacataatgtctcagtgagttctacctaatcc-taggctataggtaacctcggggaaaacctatggtcaccacgtgtctaca |
111 |
Q |
| |
|
|||| |||| ||||| |||||||||||||||| |||||||||||||| || ||||||| |||||||||||||||||||||| ||| |||||||||| ||| |
|
|
| T |
11246340 |
aataaaggaatgggaggagacataatgtctcattgagttctacctaagccctaggctagaggtaacctcggggaaaacctacggttaccacgtgtccaca |
11246241 |
T |
|
| Q |
112 |
atacaacctggcggttgattatacgtgtgtg |
142 |
Q |
| |
|
|||||||| | |||||||| ||| ||||||| |
|
|
| T |
11246240 |
atacaaccggtcggttgatgatatgtgtgtg |
11246210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 20920420 - 20920345
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatg |
94 |
Q |
| |
|
|||||||||||||| ||| |||||||||||||||| |||| |||||||| | |||| || ||||||||||||||||| |
|
|
| T |
20920420 |
aggattgggatgaggcatgatgtctcagtgagttccacct-atcctaggttgtaggcaatctcggggaaaacctatg |
20920345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 42786583 - 42786517
Alignment:
| Q |
19 |
ggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaa |
86 |
Q |
| |
|
|||||||| ||||||| |||||||||||||||| ||||| |||||||||||||| |||||||||||| |
|
|
| T |
42786583 |
ggattggggtgagacaagatgtctcagtgagttccaccta-tcctaggctataggcaacctcggggaa |
42786517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 48477403 - 48477469
Alignment:
| Q |
19 |
ggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaa |
86 |
Q |
| |
|
|||||||| ||||||| |||||||||||||||| |||| ||||||||||||||| |||||||||||| |
|
|
| T |
48477403 |
ggattggggtgagacaagatgtctcagtgagttccacct-atcctaggctataggcaacctcggggaa |
48477469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 1454825 - 1454901
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctc-ggggaaaacctatg |
94 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| | || |||||||||| |||| || ||| |||||||||||||| |
|
|
| T |
1454825 |
aggattgggatgagacagaatgtctcagtgagttccatct-atcctaggctctaggcaatctcgggggaaaacctatg |
1454901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 19802251 - 19802318
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaa |
86 |
Q |
| |
|
||||||||| ||||||| ||||||||||||||||| |||| |||||||||| |||| || ||||||||| |
|
|
| T |
19802251 |
aggattggggtgagacaaaatgtctcagtgagttccacct-atcctaggctgtaggcaatctcggggaa |
19802318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 4340549 - 4340611
Alignment:
| Q |
20 |
gattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggg |
83 |
Q |
| |
|
||||||| ||||||| ||||||||||||||||| |||| |||||||||| |||| ||||||||| |
|
|
| T |
4340549 |
gattggggtgagacaaaatgtctcagtgagttccacct-atcctaggctgtaggcaacctcggg |
4340611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 21959290 - 21959224
Alignment:
| Q |
19 |
ggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaa |
86 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||||| |||| |||||||||| |||| || ||||||||| |
|
|
| T |
21959290 |
ggattggggtgagacaaaatgtctcagtgagttccacct-atcctaggctgtaggcaatctcggggaa |
21959224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 21814725 - 21814771
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaatccta |
64 |
Q |
| |
|
||||||||||||||||||||| |||||||||| | ||||||||||| |
|
|
| T |
21814725 |
aggattgggatgagacataatatctcagtgagcttcacctaatccta |
21814771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 2934715 - 2934748
Alignment:
| Q |
19 |
ggattgggatgagacataatgtctcagtgagttc |
52 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| |
|
|
| T |
2934715 |
ggattgggacgagacataatgtctcagtgagttc |
2934748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 8571571 - 8571616
Alignment:
| Q |
189 |
ggtttttcagagtttcatgtatagttatcaaattgactatattatt |
234 |
Q |
| |
|
||||||| |||||||||||||||| ||||||||| | ||||||||| |
|
|
| T |
8571571 |
ggttttttagagtttcatgtataggtatcaaattaattatattatt |
8571616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 119; Significance: 7e-61; HSPs: 11)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 18 - 176
Target Start/End: Original strand, 26227809 - 26227966
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatacaa |
117 |
Q |
| |
|
||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |
|
|
| T |
26227809 |
aggattgagatgagacataatgtcttagtgagttctacctaatcctaggctataggtaacctcggggagaacctatggtcaccacgtgtctgcaatacaa |
26227908 |
T |
|
| Q |
118 |
cctggcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcatactaga |
176 |
Q |
| |
|
|||| |||||||||||||||||| || | ||||||||||||||||||||||||||||| |
|
|
| T |
26227909 |
cctgtcggttgattatacgtgtgcgg-gcttgcttgtctagacggtcgtgcatactaga |
26227966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 16261586 - 16261744
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctc-ggggaaaacctatggtcaccacgtgtctacaataca |
116 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||| |
|
|
| T |
16261586 |
aggattgggatgagacataatgtcttagtgagttctacctaatcctaggctataggtaacctcgggggaaaacctaaggttaccacgtgtctacaataca |
16261685 |
T |
|
| Q |
117 |
acctggcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcatactag |
175 |
Q |
| |
|
|| || |||||||||||||||||||||| ||| ||| ||||||||| ||||||||||| |
|
|
| T |
16261686 |
acttgtcggttgattatacgtgtgtggagcattcttacctagacggtagtgcatactag |
16261744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 18 - 176
Target Start/End: Original strand, 9344933 - 9345089
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatacaa |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||| |
|
|
| T |
9344933 |
aggattgggatgagacataatgtctcagtgaattctacctaatcctaggctataggtaacctcgagg-aaacctagggtcaccacgtgtctacaatacaa |
9345031 |
T |
|
| Q |
118 |
cctggcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcatactaga |
176 |
Q |
| |
|
|||| |||||||| ||| |||| || ||||||||| ||| || || |||||||||||| |
|
|
| T |
9345032 |
cctgtcggttgataatatgtgt-tgcatcatgctttcctatacagttgtgcatactaga |
9345089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 9340797 - 9340680
Alignment:
| Q |
24 |
gggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatacaacctggc |
123 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||| |||||| | |
|
|
| T |
9340797 |
gggatgagacataatgtctcagtgagttctacctaatcctaggctagaggtaacctcgagg-aaacctatggtcaccacgtgtctacaacacaaccattc |
9340699 |
T |
|
| Q |
124 |
ggttgattatacgtgtgtg |
142 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
9340698 |
ggttgattatacgtgtgtg |
9340680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 21 - 142
Target Start/End: Complemental strand, 14733752 - 14733632
Alignment:
| Q |
21 |
attgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatacaacct |
120 |
Q |
| |
|
|||||||||||||||| |||||||||||||| ||| ||||||||||||||||| |||||||||| ||||||||||||||||| ||| ||||| |||||| |
|
|
| T |
14733752 |
attgggatgagacatattgtctcagtgagttttacttaatcctaggctataggcaacctcgggg-aaacctatggtcaccacatgtatacaacacaacca |
14733654 |
T |
|
| Q |
121 |
ggcggttgattatacgtgtgtg |
142 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
14733653 |
ttcggttgattatacgtgtgtg |
14733632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 142
Target Start/End: Complemental strand, 15594372 - 15594249
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatacaa |
117 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||| || ||||| ||||||||| |||| |
|
|
| T |
15594372 |
aggattgggataagacataatgtctcagtgagttctacctaatcctaggctataggaaacctcaggg-aaacctatagttaccacatgtctacaacacaa |
15594274 |
T |
|
| Q |
118 |
cctggcggttgattatacgtgtgtg |
142 |
Q |
| |
|
|| ||||||||||||||| |||| |
|
|
| T |
15594273 |
ccattcggttgattatacgtttgtg |
15594249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 6634596 - 6634713
Alignment:
| Q |
25 |
ggatgagacataatgtctcagtgagttctacctaat-cctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatacaacctggc |
123 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||| ||| ||||||||||| |||| ||||||| || |||||| | |
|
|
| T |
6634596 |
ggatgagacataatgtctcactgagttctacctaatccctaggctataggcaacctcaggg-aaacctatggttaccatgtgtctagaacacaaccattc |
6634694 |
T |
|
| Q |
124 |
ggttgattatacgtgtgtg |
142 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
6634695 |
ggttgattatacgtgtgtg |
6634713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 21082231 - 21082282
Alignment:
| Q |
123 |
cggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcatacta |
174 |
Q |
| |
|
||||||||||||||| |||| | ||||||| |||||||||||||||||||| |
|
|
| T |
21082231 |
cggttgattatacgtttgtgtaacatgcttacctagacggtcgtgcatacta |
21082282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 31113711 - 31113658
Alignment:
| Q |
19 |
ggattgggatgagacataatgtctcagtgagttctacctaatcctaggctatagg |
73 |
Q |
| |
|
|||||||| |||||||| |||||||||||||||| |||| |||||||||| |||| |
|
|
| T |
31113711 |
ggattggggtgagacatgatgtctcagtgagttccacct-atcctaggctgtagg |
31113658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 34256271 - 34256207
Alignment:
| Q |
21 |
attgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaa |
86 |
Q |
| |
|
|||||| ||||||| |||| |||||||||||| |||| |||||||||| |||| || ||||||||| |
|
|
| T |
34256271 |
attggggtgagacaaaatgcctcagtgagttccacct-atcctaggctgtaggcaatctcggggaa |
34256207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 28144392 - 28144432
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctaccta |
58 |
Q |
| |
|
||||||||| ||||||| ||||||||||||||||| ||||| |
|
|
| T |
28144392 |
aggattgggctgagacaaaatgtctcagtgagttccaccta |
28144432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0240 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0240
Description:
Target: scaffold0240; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 18 - 176
Target Start/End: Complemental strand, 9852 - 9694
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatacaa |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||| |
|
|
| T |
9852 |
aggattgggatgagacataatgtctcagtgggttctacctaatcctacgctataggtaacctcggggaaaatctagggtcaccacgtgtctacaatacaa |
9753 |
T |
|
| Q |
118 |
cctggcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcatactaga |
176 |
Q |
| |
|
|||| || ||||||||||||||||||| |||||| ||||||||||||||||||||| |
|
|
| T |
9752 |
cctgtcgattgattatacgtgtgtggaatatgcttacttagacggtcgtgcatactaga |
9694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 115; Significance: 2e-58; HSPs: 12)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 18 - 176
Target Start/End: Complemental strand, 21540013 - 21539856
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatacaa |
117 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
21540013 |
aggattgggacgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcgggggaaacctacagtcaccacgtgtctacaatacaa |
21539914 |
T |
|
| Q |
118 |
cctggcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcatactaga |
176 |
Q |
| |
|
|||| ||||||||||||||||||| | ||||||||| ||||||||||||| | |||||| |
|
|
| T |
21539913 |
cctgacggttgattatacgtgtgtcg-tcatgcttgcctagacggtcgtgtaaactaga |
21539856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 18 - 143
Target Start/End: Original strand, 30613126 - 30613250
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatacaa |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
30613126 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtgacttcaggg-aaacctaaagtcaccacgtgtctacaatacaa |
30613224 |
T |
|
| Q |
118 |
cctggcggttgattatacgtgtgtgg |
143 |
Q |
| |
|
|||| ||||||||||||||||||||| |
|
|
| T |
30613225 |
cctgacggttgattatacgtgtgtgg |
30613250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 35 - 171
Target Start/End: Original strand, 24539435 - 24539570
Alignment:
| Q |
35 |
taatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatacaacctggcggttgattata |
134 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| || ||||| |||||||||||||||||| |||||||||||| |
|
|
| T |
24539435 |
taatgtctcagtgagttctacttaatcctaggctataggtaacctcggggaaa-cctagagttaccacatgtctacaatacaacctgacggttgattata |
24539533 |
T |
|
| Q |
135 |
cgtgtgtggatcatgcttgtctagacggtcgtgcata |
171 |
Q |
| |
|
|||||||||||||||||| ||||| ||| ||||||| |
|
|
| T |
24539534 |
cgtgtgtggatcatgcttacctagaaggttgtgcata |
24539570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 25238805 - 25238963
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctc-ggggaaaacctatggtcaccacgtgtctacaataca |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||| | |||||||||||| ||| ||||||||||||||||||| |
|
|
| T |
25238805 |
aggattgggatgagacataatgtctcagtgagttctacctaatcttaggccgttggtaaccacgggggaaaacctagggttaccacgtgtctacaataca |
25238904 |
T |
|
| Q |
117 |
acctggcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcatactag |
175 |
Q |
| |
|
|| ||||||||||||| |||||||| ||||| | || ||||||||||||||||||| |
|
|
| T |
25238905 |
actattcggttgattatacttgtgtggaacatgcgtatccagacggtcgtgcatactag |
25238963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 18 - 171
Target Start/End: Complemental strand, 23808382 - 23808230
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatacaa |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||| ||||||| ||||||||||||||||||| |||| |
|
|
| T |
23808382 |
aggattgggatgagacataatgtctcagtgaggtctacctaatcctaggctatgggcgacctcgggg-aaacctacggtcaccacgtgtctacaacacaa |
23808284 |
T |
|
| Q |
118 |
cctggcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcata |
171 |
Q |
| |
|
|| |||||||||||||||||| ||| ||| | | ||||| ||||||||||| |
|
|
| T |
23808283 |
ccattcggttgattatacgtgtggggaacatacatacctagatggtcgtgcata |
23808230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 24715915 - 24715793
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatacaa |
117 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||| || |||| || |||||||||||||||||||||||| |
|
|
| T |
24715915 |
aggattgggatgagacataaagtctcagtgagttctacctaatcctaggctatgggcgacctcgtgg-aaacatacggtcaccacgtgtctacaatacaa |
24715817 |
T |
|
| Q |
118 |
cctggcggttgattatacgtgtgt |
141 |
Q |
| |
|
|| ||||||||||||| ||||| |
|
|
| T |
24715816 |
ccattcggttgattatacatgtgt |
24715793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 176
Target Start/End: Complemental strand, 19441248 - 19441153
Alignment:
| Q |
81 |
ggggaaaacctatggtcaccacgtgtctacaatacaacctggcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcatactaga |
176 |
Q |
| |
|
|||| ||||||| |||||||||||||||| ||||||||||| |||||||||||| ||||| ||| | ||||| | |||||||||||||||||||| |
|
|
| T |
19441248 |
gggggaaacctagggtcaccacgtgtctagaatacaacctgacggttgattatatgtgtgaggagcttgcttacccagacggtcgtgcatactaga |
19441153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 176
Target Start/End: Complemental strand, 19577398 - 19577303
Alignment:
| Q |
81 |
ggggaaaacctatggtcaccacgtgtctacaatacaacctggcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcatactaga |
176 |
Q |
| |
|
|||| ||||||| |||||||||||||||| ||||||||||| |||||||||||| ||||| ||| | ||||| | |||||||||||||||||||| |
|
|
| T |
19577398 |
gggggaaacctagggtcaccacgtgtctagaatacaacctgacggttgattatatgtgtgaggagcttgcttacccagacggtcgtgcatactaga |
19577303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 25190495 - 25190420
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaa-tcctaggctataggtaacctcggggaaaaccta |
92 |
Q |
| |
|
|||| ||||||||||||||||| |||| | |||||||||||| |||||||||| ||||||||||| |||||||||| |
|
|
| T |
25190495 |
aggaatgggatgagacataatgcctcaattagttctacctaagtcctaggctagaggtaacctcgaggaaaaccta |
25190420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 18005620 - 18005582
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacc |
56 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
18005620 |
aggattgggatgagatataatgtctcagtgagttctacc |
18005582 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 5557130 - 5557194
Alignment:
| Q |
21 |
attgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaa |
86 |
Q |
| |
|
|||||| ||||||| ||||||||||||||||| |||| |||||||||| |||| || ||||||||| |
|
|
| T |
5557130 |
attggggtgagacaaaatgtctcagtgagttccacct-atcctaggctgtaggcaatctcggggaa |
5557194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 25004071 - 25004004
Alignment:
| Q |
19 |
ggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaa |
87 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||||| |||| |||||||||| |||| || ||| |||||| |
|
|
| T |
25004071 |
ggattggggtgagacagaatgtctcagtgagttccacct-atcctaggctgtaggcaatctcagggaaa |
25004004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 111; Significance: 4e-56; HSPs: 12)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 18 - 176
Target Start/End: Original strand, 19243180 - 19243337
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatacaa |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |
|
|
| T |
19243180 |
aggattgggatgagacataatgtctcagtgagttctacctaaccctaggctataggtaacatcagggaaaacctatggtcaccacgtgtctacaatacaa |
19243279 |
T |
|
| Q |
118 |
cctggcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcatactaga |
176 |
Q |
| |
|
|||| ||||||||||||||| ||||| | |||||| ||||||||| ||| |||||||| |
|
|
| T |
19243280 |
cctgccggttgattatacgtatgtgg-gcttgcttgcctagacggttgtgtatactaga |
19243337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 18 - 176
Target Start/End: Original strand, 3575227 - 3575385
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctc-ggggaaaacctatggtcaccacgtgtctacaataca |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||| ||||||| | ||||||||||||| |
|
|
| T |
3575227 |
aggattgggatgagacataatgtctcagtgagttctacataatcctaggctatagggaacctcaggggaaaacctagggtcaccgcatgtctacaataca |
3575326 |
T |
|
| Q |
117 |
acctggcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcatactaga |
176 |
Q |
| |
|
||||| ||||||||||||||||||||| | |||||| ||||||||| |||||||||||| |
|
|
| T |
3575327 |
acctgccggttgattatacgtgtgtgg-gcttgcttgcctagacggttgtgcatactaga |
3575385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 16 - 176
Target Start/End: Original strand, 22800486 - 22800646
Alignment:
| Q |
16 |
ataggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatac |
115 |
Q |
| |
|
||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||| ||| || |||| |||||||| ||||||||||||| |
|
|
| T |
22800486 |
ataggattgggatgacacataatgtctcaatgagttctacctaatcctacgctataggtaacctcaggggaagcctagggtcaccatgtgtctacaatac |
22800585 |
T |
|
| Q |
116 |
aacctggcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcatactaga |
176 |
Q |
| |
|
||| || ||||||||||||| |||||||| ||||||| ||||||| |||||||||||||| |
|
|
| T |
22800586 |
aacatgtcggttgattatacatgtgtggaacatgcttacctagacgatcgtgcatactaga |
22800646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 16 - 174
Target Start/End: Original strand, 22805284 - 22805439
Alignment:
| Q |
16 |
ataggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatac |
115 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
22805284 |
ataggattgggatgagacataatgtctcattgagttctacctaatcctaggctataggtaacctcggg--aaacctatggttaccacgtgtctacaatat |
22805381 |
T |
|
| Q |
116 |
aacctggcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcatacta |
174 |
Q |
| |
|
||| | ||||||||| |||||||||||| | | |||| |||||||||||||||||||| |
|
|
| T |
22805382 |
tacccgacggttgattttacgtgtgtgga-cttacttgcctagacggtcgtgcatacta |
22805439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 18 - 142
Target Start/End: Complemental strand, 381756 - 381633
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatacaa |
117 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||| |||| |||||| ||||||||||||||| |||| |
|
|
| T |
381756 |
aggattgggatgagacataatgtctcaatgagttctacctaatcctatgctataggcaacctcgggg-aaacttatggttaccacgtgtctacaacacaa |
381658 |
T |
|
| Q |
118 |
cctggcggttgattatacgtgtgtg |
142 |
Q |
| |
|
|| | |||||||||||||||||| |
|
|
| T |
381657 |
ccattcagttgattatacgtgtgtg |
381633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 76 - 176
Target Start/End: Original strand, 21950092 - 21950191
Alignment:
| Q |
76 |
acctcggggaaaacctatggtcaccacgtgtctacaatacaacctggcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcatactag |
175 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||| ||||||||||| |
|
|
| T |
21950092 |
acctcggggaaa-cctatggtcaccacgtgtctacaatacaacctgacggttgattatacgtgtgtgggtcatgcttacctagacggttgtgcatactag |
21950190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 111
Target Start/End: Original strand, 7464668 - 7464760
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctaca |
111 |
Q |
| |
|
|||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| || |||||| ||||| | |||||||||||||||||| |
|
|
| T |
7464668 |
aggattggcatgagacataatgtcttagtgagttctacctaatcctaggctataggtgacatcgggg-aaaccaacggtcaccacgtgtctaca |
7464760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 142
Target Start/End: Original strand, 36321894 - 36322018
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatacaa |
117 |
Q |
| |
|
|||| |||||||||| | ||||||||||||| |||||||||| ||||||||||| | |||||| |||||||||||||| ||||||||| ||||| |||| |
|
|
| T |
36321894 |
aggaatgggatgagatacaatgtctcagtgacttctacctaaccctaggctatatgcaacctcaaggaaaacctatggttaccacgtgtttacaacacaa |
36321993 |
T |
|
| Q |
118 |
cctggcggttgattatacgtgtgtg |
142 |
Q |
| |
|
|| |||||||||||| ||||||| |
|
|
| T |
36321994 |
ccaatcggttgattataggtgtgtg |
36322018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 21950056 - 21950095
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacct |
57 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21950056 |
aggattgggatgagacataatgtctcagtgagttctacct |
21950095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 19359948 - 19359884
Alignment:
| Q |
21 |
attgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaa |
86 |
Q |
| |
|
|||||| ||||||| ||||||||||||||||| |||| |||||||||| |||| || ||||||||| |
|
|
| T |
19359948 |
attggggtgagacaaaatgtctcagtgagttccacct-atcctaggctgtaggcaatctcggggaa |
19359884 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 16463265 - 16463311
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaatccta |
64 |
Q |
| |
|
||||||||||||||||||||| |||||||||| | ||||||||||| |
|
|
| T |
16463265 |
aggattgggatgagacataatatctcagtgagcttcacctaatccta |
16463311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 38094236 - 38094202
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttc |
52 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| |
|
|
| T |
38094236 |
aggattgagatgagacataatgtctcagtgagttc |
38094202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 110; Significance: 2e-55; HSPs: 15)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 28086030 - 28086185
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatacaa |
117 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |
|
|
| T |
28086030 |
aggattggaatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcgggg-aaacctatggtcaccacatgtctacaatacaa |
28086128 |
T |
|
| Q |
118 |
cctggcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcatactag |
175 |
Q |
| |
|
|||| ||||||||||||||||||||| | ||||| ||||||||| ||||||||||| |
|
|
| T |
28086129 |
cctgccggttgattatacgtgtgtgg-gcttgctttcctagacggttgtgcatactag |
28086185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 18 - 170
Target Start/End: Original strand, 10667721 - 10667873
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatacaa |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||| || ||||| |||||||||||||| |
|
|
| T |
10667721 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggttgtaggtaacctcgggggaaacctagggctaccacatgtctacaatacaa |
10667820 |
T |
|
| Q |
118 |
cctggcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcat |
170 |
Q |
| |
|
|||| ||||||||||||||||||||| ||||||| ||||||||| |||||| |
|
|
| T |
10667821 |
cctgtcggttgattatacgtgtgtggggcatgcttacctagacggttgtgcat |
10667873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 18 - 170
Target Start/End: Original strand, 10881866 - 10882018
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatacaa |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||| || ||||| |||||||||||||| |
|
|
| T |
10881866 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggttgtaggtaacctcgggggaaacctagggctaccacatgtctacaatacaa |
10881965 |
T |
|
| Q |
118 |
cctggcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcat |
170 |
Q |
| |
|
|||| ||||||||||||||||||||| ||||||| ||||||||| |||||| |
|
|
| T |
10881966 |
cctgtcggttgattatacgtgtgtggggcatgcttacctagacggttgtgcat |
10882018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 10702590 - 10702436
Alignment:
| Q |
22 |
ttgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatacaacctg |
121 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||| ||| ||||||| || ||||| |||||||||||||||||| |
|
|
| T |
10702590 |
ttgggatgagacataatgtctcagtgagttctacctaatcgtaggttttaggtaacctctggggaaacctagggctaccacatgtctacaatacaacctg |
10702491 |
T |
|
| Q |
122 |
gcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcatactaga |
176 |
Q |
| |
|
||||||||||||||||||||| ||||||| ||||||||| |||||||||||| |
|
|
| T |
10702490 |
tcggttgattatacgtgtgtggggcatgcttacctagacggttgtgcatactaga |
10702436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 10916360 - 10916206
Alignment:
| Q |
22 |
ttgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatacaacctg |
121 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||| ||| ||||||| || ||||| |||||||||||||||||| |
|
|
| T |
10916360 |
ttgggatgagacataatgtctcagtgagttctacctaatcgtaggttttaggtaacctctggggaaacctagggctaccacatgtctacaatacaacctg |
10916261 |
T |
|
| Q |
122 |
gcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcatactaga |
176 |
Q |
| |
|
||||||||||||||||||||| ||||||| ||||||||| |||||||||||| |
|
|
| T |
10916260 |
tcggttgattatacgtgtgtggggcatgcttacctagacggttgtgcatactaga |
10916206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 14283668 - 14283542
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaat-cctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaataca |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| || |
|
|
| T |
14283668 |
aggattgggatgagacataatgtctcagtgagttctacctaattcctaggctataggtaacctcggggaaaacctagggtcaccacgtgtctacaactca |
14283569 |
T |
|
| Q |
117 |
acctggcggttgattatacgtgtgtgg |
143 |
Q |
| |
|
||||| || |||| ||||||| ||||| |
|
|
| T |
14283568 |
acctgtcgattgagtatacgtatgtgg |
14283542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 14827720 - 14827561
Alignment:
| Q |
16 |
ataggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatac |
115 |
Q |
| |
|
|||||| || |||||||| |||||||| ||||||||| ||||||||||||||||||||||||||| ||| ||||||| | | |||| |||||||||| || |
|
|
| T |
14827720 |
ataggactgagatgagacctaatgtcttagtgagttcaacctaatcctaggctataggtaacctcaggggaaacctaggattaccatgtgtctacaacac |
14827621 |
T |
|
| Q |
116 |
aacctggcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcatactag |
175 |
Q |
| |
|
|||| |||||||||||||||||||||| ||||||| |||||| ||||||||||||| |
|
|
| T |
14827620 |
aaccattcggttgattatacgtgtgtggagcatgcttacctagacaatcgtgcatactag |
14827561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 14817821 - 14817662
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacct--aatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatac |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||| ||||||| ||| ||||||||||||||| || |
|
|
| T |
14817821 |
aggattgggatgagacataatgtctcagtgagttctacctctaatcctatgttataggtaacctcgggtgaaacctagggttaccacgtgtctacaacac |
14817722 |
T |
|
| Q |
116 |
aacctggcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcatactag |
175 |
Q |
| |
|
|||| | ||||||||||| |||||||| ||| ||| ||||| | ||||||||||||| |
|
|
| T |
14817721 |
aaccattcagttgattatacatgtgtggagcattcttacctagatgatcgtgcatactag |
14817662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 67 - 176
Target Start/End: Original strand, 11169220 - 11169329
Alignment:
| Q |
67 |
ctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatacaacctggcggttgattatacgtgtgtggatcatgcttgtctagacggtcgt |
166 |
Q |
| |
|
|||||||||||||||||| |||| || ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||| || || |
|
|
| T |
11169220 |
ctataggtaacctcgggggaaacatagggtcaccacatgtctacaatacaacctgccggttgattatacgtgtgtggatcatgcttacctagacagttgt |
11169319 |
T |
|
| Q |
167 |
gcatactaga |
176 |
Q |
| |
|
||| |||||| |
|
|
| T |
11169320 |
gcacactaga |
11169329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 21324397 - 21324295
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctaccta-atcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaataca |
116 |
Q |
| |
|
|||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| || ||| | || ||||||| || ||| |
|
|
| T |
21324397 |
aggaatgggatgaggcataatgtctcagtgagttctacctaggtcctaggctataggtaacctcgggggaaacttacggttatcatgtgtctataacaca |
21324298 |
T |
|
| Q |
117 |
acc |
119 |
Q |
| |
|
||| |
|
|
| T |
21324297 |
acc |
21324295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 24697782 - 24697678
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaatc----ctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaat |
113 |
Q |
| |
|
||||||||||||| | |||||||||||||||||||||||||||| ||||| || || |||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
24697782 |
aggattgggatgataaataatgtctcagtgagttctacctaatcctagctaggatacagacaacctcgggg-aaacctatggtcaccacatgtctacaac |
24697684 |
T |
|
| Q |
114 |
acaacc |
119 |
Q |
| |
|
|||||| |
|
|
| T |
24697683 |
acaacc |
24697678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 24854541 - 24854595
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctatag |
72 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || | ||||||||||||||||| |
|
|
| T |
24854541 |
aggattgggatgagacataatgtctcagtgagctccatctaatcctaggctatag |
24854595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 2895225 - 2895159
Alignment:
| Q |
19 |
ggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaa |
86 |
Q |
| |
|
|||||||| ||||||| |||||||||||||||| ||||| |||||||||||||| |||||||||||| |
|
|
| T |
2895225 |
ggattggggtgagacaagatgtctcagtgagttccaccta-tcctaggctataggcaacctcggggaa |
2895159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 5908501 - 5908567
Alignment:
| Q |
19 |
ggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaa |
86 |
Q |
| |
|
|||||||| ||||||| |||||||||||||||| |||| ||||||||||||||| |||||||||||| |
|
|
| T |
5908501 |
ggattggggtgagacaagatgtctcagtgagttccacct-atcctaggctataggcaacctcggggaa |
5908567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 58
Target Start/End: Complemental strand, 6735823 - 6735784
Alignment:
| Q |
19 |
ggattgggatgagacataatgtctcagtgagttctaccta |
58 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| ||||| |
|
|
| T |
6735823 |
ggattgggatgagacatgatgtctcagtgagttccaccta |
6735784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0627 (Bit Score: 104; Significance: 6e-52; HSPs: 1)
Name: scaffold0627
Description:
Target: scaffold0627; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 18 - 176
Target Start/End: Complemental strand, 1696 - 1537
Alignment:
| Q |
18 |
aggattgggatgagacataa-tgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaataca |
116 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||| |||| |
|
|
| T |
1696 |
aggattgggatgagacataaatgtctcagtgagttctacctaatcctaggctataggtaacctcgggggaatcctagggtcaccacgtgtctacattaca |
1597 |
T |
|
| Q |
117 |
acctggcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcatactaga |
176 |
Q |
| |
|
||||| |||||||||| ||| ||||||| | ||||| | |||||||||||||||||||| |
|
|
| T |
1596 |
acctgacggttgattaaacgcgtgtggagcttgcttacccagacggtcgtgcatactaga |
1537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0042 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0042
Description:
Target: scaffold0042; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 18 - 176
Target Start/End: Complemental strand, 10666 - 10507
Alignment:
| Q |
18 |
aggattgggatgagacata-atgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaataca |
116 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||| |
|
|
| T |
10666 |
aggattgggatgagacatatatgtctcagtgagttctacctaatcctaggctataggtaacctcgggggaatcctagggtcaccacgtgtctacaataca |
10567 |
T |
|
| Q |
117 |
acctggcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcatactaga |
176 |
Q |
| |
|
||||| |||||||||| ||| ||| ||| | ||||| | ||||||||||| |||||||| |
|
|
| T |
10566 |
acctgacggttgattaaacgcgtgcggagcttgcttacccagacggtcgtgtatactaga |
10507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0188 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0188
Description:
Target: scaffold0188; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 12870 - 13005
Alignment:
| Q |
16 |
ataggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatac |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||| ||||| ||||||| || |
|
|
| T |
12870 |
ataggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggcaacctcgaggaaaacctagagtca-cacgtctctacaacac |
12968 |
T |
|
| Q |
116 |
aacctggcggttgattatacgtgtgtggatcatgctt |
152 |
Q |
| |
|
|||| ||||| |||||||||||||||| ||||||| |
|
|
| T |
12969 |
aaccattcggtttattatacgtgtgtggaacatgctt |
13005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0047 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0047
Description:
Target: scaffold0047; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 24531 - 24372
Alignment:
| Q |
16 |
ataggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatac |
115 |
Q |
| |
|
|||||| || |||||||| |||||||| ||||||||| ||||||||||||||||||||||||||| ||| ||||||| | | |||| |||||||||| || |
|
|
| T |
24531 |
ataggactgagatgagacctaatgtcttagtgagttcaacctaatcctaggctataggtaacctcaggggaaacctaggattaccatgtgtctacaacac |
24432 |
T |
|
| Q |
116 |
aacctggcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcatactag |
175 |
Q |
| |
|
|||| |||||||||||||||||||||| ||||||| |||||| ||||||||||||| |
|
|
| T |
24431 |
aaccattcggttgattatacgtgtgtggagcatgcttacctagacaatcgtgcatactag |
24372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0005 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0005
Description:
Target: scaffold0005; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 175
Target Start/End: Original strand, 11989 - 12148
Alignment:
| Q |
16 |
ataggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatac |
115 |
Q |
| |
|
|||||| || |||||||| |||||||| ||||||||| ||||||||||||||||||||||||||| ||| ||||||| | | |||| |||||||||| || |
|
|
| T |
11989 |
ataggactgagatgagacctaatgtcttagtgagttcaacctaatcctaggctataggtaacctcaggggaaacctaggattaccatgtgtctacaacac |
12088 |
T |
|
| Q |
116 |
aacctggcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcatactag |
175 |
Q |
| |
|
|||| |||||||||||||||||||||| ||||||| |||||| ||||||||||||| |
|
|
| T |
12089 |
aaccattcggttgattatacgtgtgtggagcatgcttacctagacaatcgtgcatactag |
12148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0005; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 21890 - 22049
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacct--aatcctaggctataggtaacctcggggaaaacctatggtcaccacgtgtctacaatac |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||| ||||||| ||| ||||||||||||||| || |
|
|
| T |
21890 |
aggattgggatgagacataatgtctcagtgagttctacctctaatcctatgttataggtaacctcgggtgaaacctagggttaccacgtgtctacaacac |
21989 |
T |
|
| Q |
116 |
aacctggcggttgattatacgtgtgtggatcatgcttgtctagacggtcgtgcatactag |
175 |
Q |
| |
|
|||| | ||||||||||| |||||||| ||| ||| ||||| | ||||||||||||| |
|
|
| T |
21990 |
aaccattcagttgattatacatgtgtggagcattcttacctagatgatcgtgcatactag |
22049 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0158 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0158
Description:
Target: scaffold0158; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 72 - 5
Alignment:
| Q |
18 |
aggattgggatgagacataatgtctcagtgagttctacctaatcctaggctataggtaacctcggggaa |
86 |
Q |
| |
|
||||||||| ||||||| ||||||||||||||||| |||| |||||||||| |||| || ||||||||| |
|
|
| T |
72 |
aggattggggtgagacaaaatgtctcagtgagttccacct-atcctaggctgtaggcaatctcggggaa |
5 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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