View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19530_low_194 (Length: 223)
Name: NF19530_low_194
Description: NF19530
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19530_low_194 |
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Alignment Details
Target: chr7 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 12 - 206
Target Start/End: Complemental strand, 42741045 - 42740853
Alignment:
| Q |
12 |
aagaatatttgactatgactttgaattttttgggataaattcatttattcagatgtgcgaggctattgacagctcagtgacgggaaagaatacattagag |
111 |
Q |
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| T |
42741045 |
aagaataattgactatgactttgaattttggggga--aattcatttattcagatgtgcgaggctattgacagctcagtgacgggaaagaatacattagag |
42740948 |
T |
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| Q |
112 |
aagttgtatgatgctgcaagtatatactacaactatagtggtacctctaagtgtttcgatttaaatgatcattctgatcctcatgatcttggagg |
206 |
Q |
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| T |
42740947 |
aagttgtatgatgctgcaagtatatactacaactatagtggtacctctaagtgtttcgatttaaatgatcattctgatcctcatgatcttggagg |
42740853 |
T |
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