View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19530_low_54 (Length: 422)

Name: NF19530_low_54
Description: NF19530
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19530_low_54
NF19530_low_54
[»] chr7 (12 HSPs)
chr7 (19-422)||(31690910-31691301)
chr7 (391-422)||(22759065-22759096)
chr7 (391-422)||(27708934-27708965)
chr7 (347-386)||(42656459-42656498)
chr7 (391-421)||(28702639-28702669)
chr7 (347-380)||(2999141-2999174)
chr7 (393-422)||(25507247-25507276)
chr7 (349-386)||(28178913-28178950)
chr7 (347-401)||(12110292-12110343)
chr7 (391-419)||(31832193-31832221)
chr7 (347-379)||(39591554-39591586)
chr7 (391-419)||(39630264-39630292)
[»] chr2 (9 HSPs)
chr2 (348-389)||(33197327-33197368)
chr2 (391-422)||(6772695-6772726)
chr2 (347-386)||(17952788-17952827)
chr2 (347-386)||(31461382-31461421)
chr2 (347-386)||(32098395-32098434)
chr2 (347-394)||(40837515-40837562)
chr2 (392-421)||(10285758-10285787)
chr2 (347-379)||(29633023-29633055)
chr2 (347-379)||(33576681-33576713)
[»] chr8 (12 HSPs)
chr8 (347-422)||(12224986-12225058)
chr8 (347-421)||(26820112-26820182)
chr8 (347-386)||(14482146-14482185)
chr8 (391-422)||(31167866-31167897)
chr8 (347-386)||(31915356-31915395)
chr8 (347-386)||(39392748-39392787)
chr8 (345-379)||(29699205-29699239)
chr8 (393-422)||(12291784-12291813)
chr8 (347-379)||(8799356-8799388)
chr8 (347-379)||(11119086-11119118)
chr8 (347-379)||(40728505-40728537)
chr8 (345-385)||(44348432-44348472)
[»] chr5 (14 HSPs)
chr5 (347-380)||(10280663-10280696)
chr5 (347-386)||(7096214-7096253)
chr5 (391-422)||(14257346-14257377)
chr5 (391-422)||(30845202-30845233)
chr5 (347-386)||(37063161-37063200)
chr5 (306-379)||(912696-912768)
chr5 (347-380)||(10303751-10303784)
chr5 (347-380)||(14295456-14295489)
chr5 (347-380)||(28586853-28586886)
chr5 (347-380)||(35095870-35095903)
chr5 (391-420)||(36638644-36638673)
chr5 (347-379)||(29117017-29117049)
chr5 (348-380)||(29590828-29590860)
chr5 (347-379)||(35135749-35135781)
[»] chr3 (9 HSPs)
chr3 (347-422)||(20192693-20192765)
chr3 (347-387)||(49587003-49587043)
chr3 (347-386)||(1395615-1395654)
chr3 (391-422)||(4534499-4534530)
chr3 (391-422)||(20874458-20874489)
chr3 (348-386)||(905058-905096)
chr3 (391-420)||(8933670-8933699)
chr3 (347-379)||(26990685-26990717)
chr3 (347-379)||(54775079-54775111)
[»] chr1 (11 HSPs)
chr1 (347-380)||(39777613-39777646)
chr1 (347-422)||(14737792-14737872)
chr1 (391-422)||(6933117-6933148)
chr1 (391-422)||(32555704-32555735)
chr1 (391-422)||(48146173-48146204)
chr1 (347-389)||(46499941-46499983)
chr1 (348-386)||(50319236-50319274)
chr1 (390-422)||(4019748-4019780)
chr1 (347-379)||(15360845-15360877)
chr1 (347-379)||(36641826-36641858)
chr1 (347-379)||(49517021-49517053)
[»] scaffold0590 (1 HSPs)
scaffold0590 (347-386)||(1161-1200)
[»] scaffold0275 (1 HSPs)
scaffold0275 (347-386)||(2775-2814)
[»] chr4 (11 HSPs)
chr4 (351-386)||(30338683-30338718)
chr4 (347-386)||(51044546-51044585)
chr4 (348-378)||(9319283-9319313)
chr4 (347-385)||(10192229-10192267)
chr4 (347-380)||(4071832-4071865)
chr4 (391-420)||(7730513-7730542)
chr4 (347-380)||(20936089-20936122)
chr4 (391-420)||(41162211-41162240)
chr4 (351-401)||(6364081-6364128)
chr4 (347-379)||(19422369-19422401)
chr4 (394-422)||(52645572-52645600)
[»] chr6 (5 HSPs)
chr6 (348-389)||(281936-281977)
chr6 (391-420)||(2023787-2023816)
chr6 (347-380)||(30865432-30865465)
chr6 (347-379)||(5328925-5328957)
chr6 (347-379)||(24836286-24836318)


Alignment Details
Target: chr7 (Bit Score: 334; Significance: 0; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 334; E-Value: 0
Query Start/End: Original strand, 19 - 422
Target Start/End: Original strand, 31690910 - 31691301
Alignment:
Q  19 cagacaacaatgattagctttatgctaatacaaggtgattgtttataggataaaggagaagtgataatttacttatagttatttgaatttattccttcag 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31690910 cagacaacaatgattagctttatgctaatacaaggtgattgtttataggataaaggagaagtgataatttacttatagttatttgaatttattccttcag 31691009  T
Q  119 ctttgacaaaagatggatgatactaaagttggtatgagaagagttagatcagttaaagatgttattagtctatatgatgataggaatcataggactgctg 218  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31691010 ttttgacaaaagatggatgatactaaagttggtatgagaagagttagatcagttaaagatgttattagtctatatgatgataggaatcataggactgctg 31691109  T
Q  219 atagttcttcattgaagaaaactcagatagacttcgaggcggatttctcagcggtaagttcagannnnnnnccacaagctttctagaatagattataaaa 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  31691110 atagttcttcattgaagaaaactcagatagacttcgaggcggatttctcagcggtaagttcagatttttttccacaagctttctagaatagattataaaa 31691209  T
Q  319 acaacttatagctcatgtggaatcgaattttgactttattctatcttttgttatagaaataggttatagatcataagtgcttaattaagttgtttatcca 418  Q
    ||||||||||||||||||||||||||||||||||            |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31691210 acaacttatagctcatgtggaatcgaattttgac------------tttgttctagaaataggttatagatcataagtgcttaattaagttgtttatcca 31691297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 391 - 422
Target Start/End: Complemental strand, 22759096 - 22759065
Alignment:
Q  391 ataagtgcttaattaagttgtttatccaaaca 422  Q
    ||||||||||||||||||||||||||||||||    
T  22759096 ataagtgcttaattaagttgtttatccaaaca 22759065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 391 - 422
Target Start/End: Original strand, 27708934 - 27708965
Alignment:
Q  391 ataagtgcttaattaagttgtttatccaaaca 422  Q
    ||||||||||||||||||||||||||||||||    
T  27708934 ataagtgcttaattaagttgtttatccaaaca 27708965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 347 - 386
Target Start/End: Complemental strand, 42656498 - 42656459
Alignment:
Q  347 tttgactttattctatcttttgttatagaaataggttata 386  Q
    |||||||||||| ||||||||||||||||||||| |||||    
T  42656498 tttgactttattttatcttttgttatagaaatagcttata 42656459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 421
Target Start/End: Complemental strand, 28702669 - 28702639
Alignment:
Q  391 ataagtgcttaattaagttgtttatccaaac 421  Q
    |||||||||||||||||||||||||||||||    
T  28702669 ataagtgcttaattaagttgtttatccaaac 28702639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 380
Target Start/End: Complemental strand, 2999174 - 2999141
Alignment:
Q  347 tttgactttattctatcttttgttatagaaatag 380  Q
    |||||||||||| |||||||||||||||||||||    
T  2999174 tttgactttattttatcttttgttatagaaatag 2999141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 393 - 422
Target Start/End: Complemental strand, 25507276 - 25507247
Alignment:
Q  393 aagtgcttaattaagttgtttatccaaaca 422  Q
    ||||||||||||||||||||||||||||||    
T  25507276 aagtgcttaattaagttgtttatccaaaca 25507247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 386
Target Start/End: Complemental strand, 28178950 - 28178913
Alignment:
Q  349 tgactttattctatcttttgttatagaaataggttata 386  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  28178950 tgactttattttatcttttgttatagaaatagcttata 28178913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 401
Target Start/End: Complemental strand, 12110343 - 12110292
Alignment:
Q  347 tttgactttattctatcttttgttatagaaataggttatagatcataagtgctta 401  Q
    |||||||||||| |||||| ||| |||||||||||||||   |||||||||||||    
T  12110343 tttgactttattttatcttgtgtaatagaaataggttat---tcataagtgctta 12110292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 391 - 419
Target Start/End: Complemental strand, 31832221 - 31832193
Alignment:
Q  391 ataagtgcttaattaagttgtttatccaa 419  Q
    |||||||||||||||||||||||||||||    
T  31832221 ataagtgcttaattaagttgtttatccaa 31832193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 379
Target Start/End: Original strand, 39591554 - 39591586
Alignment:
Q  347 tttgactttattctatcttttgttatagaaata 379  Q
    |||||||||||| ||||||||||||||||||||    
T  39591554 tttgactttattttatcttttgttatagaaata 39591586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 391 - 419
Target Start/End: Complemental strand, 39630292 - 39630264
Alignment:
Q  391 ataagtgcttaattaagttgtttatccaa 419  Q
    |||||||||||||||||||||||||||||    
T  39630292 ataagtgcttaattaagttgtttatccaa 39630264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 348 - 389
Target Start/End: Original strand, 33197327 - 33197368
Alignment:
Q  348 ttgactttattctatcttttgttatagaaataggttatagat 389  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  33197327 ttgactttattctatcttttgttatagaaatagcttatagat 33197368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 391 - 422
Target Start/End: Original strand, 6772695 - 6772726
Alignment:
Q  391 ataagtgcttaattaagttgtttatccaaaca 422  Q
    ||||||||||||||||||||||||||||||||    
T  6772695 ataagtgcttaattaagttgtttatccaaaca 6772726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 347 - 386
Target Start/End: Original strand, 17952788 - 17952827
Alignment:
Q  347 tttgactttattctatcttttgttatagaaataggttata 386  Q
    |||||||||||| ||||||||||||||||||||| |||||    
T  17952788 tttgactttattttatcttttgttatagaaatagcttata 17952827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 347 - 386
Target Start/End: Complemental strand, 31461421 - 31461382
Alignment:
Q  347 tttgactttattctatcttttgttatagaaataggttata 386  Q
    |||||||||||| ||||||||||||||||||||| |||||    
T  31461421 tttgactttattttatcttttgttatagaaatagcttata 31461382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 347 - 386
Target Start/End: Original strand, 32098395 - 32098434
Alignment:
Q  347 tttgactttattctatcttttgttatagaaataggttata 386  Q
    |||||||||||| ||||||||||||||||||||| |||||    
T  32098395 tttgactttattttatcttttgttatagaaatagcttata 32098434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 347 - 394
Target Start/End: Original strand, 40837515 - 40837562
Alignment:
Q  347 tttgactttattctatcttttgttatagaaataggttatagatcataa 394  Q
    |||||||||| | ||||||||||||||||||||| ||||| |||||||    
T  40837515 tttgactttaatttatcttttgttatagaaatagcttatacatcataa 40837562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 392 - 421
Target Start/End: Complemental strand, 10285787 - 10285758
Alignment:
Q  392 taagtgcttaattaagttgtttatccaaac 421  Q
    ||||||||||||||||||||||||||||||    
T  10285787 taagtgcttaattaagttgtttatccaaac 10285758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 379
Target Start/End: Complemental strand, 29633055 - 29633023
Alignment:
Q  347 tttgactttattctatcttttgttatagaaata 379  Q
    |||||||||||||||| ||||||||||||||||    
T  29633055 tttgactttattctattttttgttatagaaata 29633023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 379
Target Start/End: Original strand, 33576681 - 33576713
Alignment:
Q  347 tttgactttattctatcttttgttatagaaata 379  Q
    |||||||||||| ||||||||||||||||||||    
T  33576681 tttgactttattgtatcttttgttatagaaata 33576713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000006; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 422
Target Start/End: Original strand, 12224986 - 12225058
Alignment:
Q  347 tttgactttattctatcttttgttatagaaataggttatagatcataagtgcttaattaagttgtttatccaaaca 422  Q
    |||||||||||| ||||||||||  ||||||||  |||||   ||||||  |||||||||||||||||||||||||    
T  12224986 tttgactttattttatcttttgtcttagaaataacttata---cataagctcttaattaagttgtttatccaaaca 12225058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 421
Target Start/End: Complemental strand, 26820182 - 26820112
Alignment:
Q  347 tttgactttattctatcttttgttatagaaataggttatagatcataagtgcttaattaagttgtttatccaaac 421  Q
    |||||||||||| ||||||||||||||||||||  |||||     |||| |||||||| ||||||||||||||||    
T  26820182 tttgactttattttatcttttgttatagaaataacttata----ctaagcgcttaattgagttgtttatccaaac 26820112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 347 - 386
Target Start/End: Complemental strand, 14482185 - 14482146
Alignment:
Q  347 tttgactttattctatcttttgttatagaaataggttata 386  Q
    |||||||||||| ||||||||||||||||||||| |||||    
T  14482185 tttgactttattttatcttttgttatagaaatagtttata 14482146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 391 - 422
Target Start/End: Complemental strand, 31167897 - 31167866
Alignment:
Q  391 ataagtgcttaattaagttgtttatccaaaca 422  Q
    ||||||||||||||||||||||||||||||||    
T  31167897 ataagtgcttaattaagttgtttatccaaaca 31167866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 347 - 386
Target Start/End: Original strand, 31915356 - 31915395
Alignment:
Q  347 tttgactttattctatcttttgttatagaaataggttata 386  Q
    ||||||||||||||||||||||||||||| |||| |||||    
T  31915356 tttgactttattctatcttttgttatagatatagcttata 31915395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 347 - 386
Target Start/End: Original strand, 39392748 - 39392787
Alignment:
Q  347 tttgactttattctatcttttgttatagaaataggttata 386  Q
    |||||||||||| ||||||||||||||||||||| |||||    
T  39392748 tttgactttattttatcttttgttatagaaatagtttata 39392787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 379
Target Start/End: Complemental strand, 29699239 - 29699205
Alignment:
Q  345 attttgactttattctatcttttgttatagaaata 379  Q
    |||||||||||||| ||||||||||||||||||||    
T  29699239 attttgactttattttatcttttgttatagaaata 29699205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 393 - 422
Target Start/End: Original strand, 12291784 - 12291813
Alignment:
Q  393 aagtgcttaattaagttgtttatccaaaca 422  Q
    ||||||||||||||||||||||||||||||    
T  12291784 aagtgcttaattaagttgtttatccaaaca 12291813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 379
Target Start/End: Complemental strand, 8799388 - 8799356
Alignment:
Q  347 tttgactttattctatcttttgttatagaaata 379  Q
    |||||||||||| ||||||||||||||||||||    
T  8799388 tttgactttattttatcttttgttatagaaata 8799356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 379
Target Start/End: Original strand, 11119086 - 11119118
Alignment:
Q  347 tttgactttattctatcttttgttatagaaata 379  Q
    |||||||||||| ||||||||||||||||||||    
T  11119086 tttgactttattttatcttttgttatagaaata 11119118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 379
Target Start/End: Original strand, 40728505 - 40728537
Alignment:
Q  347 tttgactttattctatcttttgttatagaaata 379  Q
    |||||||||||| ||||||||||||||||||||    
T  40728505 tttgactttattttatcttttgttatagaaata 40728537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 44348472 - 44348432
Alignment:
Q  345 attttgactttattctatcttttgttatagaaataggttat 385  Q
    ||||||||||||||  |||||||||||||||||||| ||||    
T  44348472 attttgactttattacatcttttgttatagaaatagcttat 44348432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000006; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 380
Target Start/End: Original strand, 10280663 - 10280696
Alignment:
Q  347 tttgactttattctatcttttgttatagaaatag 380  Q
    ||||||||||||||||||||||||||||||||||    
T  10280663 tttgactttattctatcttttgttatagaaatag 10280696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 347 - 386
Target Start/End: Original strand, 7096214 - 7096253
Alignment:
Q  347 tttgactttattctatcttttgttatagaaataggttata 386  Q
    |||||||||||| ||||||||||||||||||||| |||||    
T  7096214 tttgactttattttatcttttgttatagaaatagcttata 7096253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 391 - 422
Target Start/End: Complemental strand, 14257377 - 14257346
Alignment:
Q  391 ataagtgcttaattaagttgtttatccaaaca 422  Q
    ||||||||||||||||||||||||||||||||    
T  14257377 ataagtgcttaattaagttgtttatccaaaca 14257346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 391 - 422
Target Start/End: Complemental strand, 30845233 - 30845202
Alignment:
Q  391 ataagtgcttaattaagttgtttatccaaaca 422  Q
    ||||||||||||||||||||||||||||||||    
T  30845233 ataagtgcttaattaagttgtttatccaaaca 30845202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 347 - 386
Target Start/End: Original strand, 37063161 - 37063200
Alignment:
Q  347 tttgactttattctatcttttgttatagaaataggttata 386  Q
    |||||||||||| ||||||||||||||||||||| |||||    
T  37063161 tttgactttattttatcttttgttatagaaatagtttata 37063200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 379
Target Start/End: Original strand, 912696 - 912768
Alignment:
Q  306 atagattataaaaacaacttatagctcatgtggaatcgaattttgactttattctatcttttgttatagaaata 379  Q
    |||| ||||||||||||||||| ||| || || || | ||||||||||||||| ||| || |||||||||||||    
T  912696 atagtttataaaaacaacttattgcttatatgaaaac-aattttgactttattttatattgtgttatagaaata 912768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 380
Target Start/End: Complemental strand, 10303784 - 10303751
Alignment:
Q  347 tttgactttattctatcttttgttatagaaatag 380  Q
    |||||||||||| |||||||||||||||||||||    
T  10303784 tttgactttattttatcttttgttatagaaatag 10303751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 380
Target Start/End: Complemental strand, 14295489 - 14295456
Alignment:
Q  347 tttgactttattctatcttttgttatagaaatag 380  Q
    |||||||||||| |||||||||||||||||||||    
T  14295489 tttgactttattttatcttttgttatagaaatag 14295456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 380
Target Start/End: Original strand, 28586853 - 28586886
Alignment:
Q  347 tttgactttattctatcttttgttatagaaatag 380  Q
    |||||||||||| |||||||||||||||||||||    
T  28586853 tttgactttattttatcttttgttatagaaatag 28586886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 380
Target Start/End: Original strand, 35095870 - 35095903
Alignment:
Q  347 tttgactttattctatcttttgttatagaaatag 380  Q
    |||||||||||| |||||||||||||||||||||    
T  35095870 tttgactttattttatcttttgttatagaaatag 35095903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 391 - 420
Target Start/End: Complemental strand, 36638673 - 36638644
Alignment:
Q  391 ataagtgcttaattaagttgtttatccaaa 420  Q
    ||||||||||||||||||||||||||||||    
T  36638673 ataagtgcttaattaagttgtttatccaaa 36638644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 379
Target Start/End: Original strand, 29117017 - 29117049
Alignment:
Q  347 tttgactttattctatcttttgttatagaaata 379  Q
    |||||||||||| ||||||||||||||||||||    
T  29117017 tttgactttattttatcttttgttatagaaata 29117049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 380
Target Start/End: Original strand, 29590828 - 29590860
Alignment:
Q  348 ttgactttattctatcttttgttatagaaatag 380  Q
    ||||||||||| |||||||||||||||||||||    
T  29590828 ttgactttattttatcttttgttatagaaatag 29590860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 379
Target Start/End: Original strand, 35135749 - 35135781
Alignment:
Q  347 tttgactttattctatcttttgttatagaaata 379  Q
    |||||||||||| ||||||||||||||||||||    
T  35135749 tttgactttattttatcttttgttatagaaata 35135781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000006; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 422
Target Start/End: Original strand, 20192693 - 20192765
Alignment:
Q  347 tttgactttattctatcttttgttatagaaataggttatagatcataagtgcttaattaagttgtttatccaaaca 422  Q
    |||||||||||| |||||||||||||| |||||| |||||   ||||||  ||||||| || ||||||||||||||    
T  20192693 tttgactttattttatcttttgttatataaatagcttata---cataagcacttaattgagctgtttatccaaaca 20192765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 347 - 387
Target Start/End: Original strand, 49587003 - 49587043
Alignment:
Q  347 tttgactttattctatcttttgttatagaaataggttatag 387  Q
    |||||||||||| ||||||||||||||||||||| ||||||    
T  49587003 tttgactttattttatcttttgttatagaaatagcttatag 49587043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 347 - 386
Target Start/End: Complemental strand, 1395654 - 1395615
Alignment:
Q  347 tttgactttattctatcttttgttatagaaataggttata 386  Q
    |||||||||||| ||||||||||||||||||||| |||||    
T  1395654 tttgactttattttatcttttgttatagaaatagcttata 1395615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 391 - 422
Target Start/End: Original strand, 4534499 - 4534530
Alignment:
Q  391 ataagtgcttaattaagttgtttatccaaaca 422  Q
    ||||||||||||||||||||||||||||||||    
T  4534499 ataagtgcttaattaagttgtttatccaaaca 4534530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 391 - 422
Target Start/End: Original strand, 20874458 - 20874489
Alignment:
Q  391 ataagtgcttaattaagttgtttatccaaaca 422  Q
    ||||||||||||||||||||||||||||||||    
T  20874458 ataagtgcttaattaagttgtttatccaaaca 20874489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 386
Target Start/End: Original strand, 905058 - 905096
Alignment:
Q  348 ttgactttattctatcttttgttatagaaataggttata 386  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  905058 ttgactttattttatcttttgttatagaaatagcttata 905096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 391 - 420
Target Start/End: Complemental strand, 8933699 - 8933670
Alignment:
Q  391 ataagtgcttaattaagttgtttatccaaa 420  Q
    ||||||||||||||||||||||||||||||    
T  8933699 ataagtgcttaattaagttgtttatccaaa 8933670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 379
Target Start/End: Complemental strand, 26990717 - 26990685
Alignment:
Q  347 tttgactttattctatcttttgttatagaaata 379  Q
    |||||||||||| ||||||||||||||||||||    
T  26990717 tttgactttattttatcttttgttatagaaata 26990685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 379
Target Start/End: Complemental strand, 54775111 - 54775079
Alignment:
Q  347 tttgactttattctatcttttgttatagaaata 379  Q
    |||||||||||| ||||||||||||||||||||    
T  54775111 tttgactttattttatcttttgttatagaaata 54775079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000006; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 380
Target Start/End: Complemental strand, 39777646 - 39777613
Alignment:
Q  347 tttgactttattctatcttttgttatagaaatag 380  Q
    ||||||||||||||||||||||||||||||||||    
T  39777646 tttgactttattctatcttttgttatagaaatag 39777613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 347 - 422
Target Start/End: Original strand, 14737792 - 14737872
Alignment:
Q  347 tttgactttattctatcttttgttatagaaataggtt-----atagatcataagtgcttaattaagttgtttatccaaaca 422  Q
    |||||||||||| ||||||||||||||||||||  ||     ||| || ||||||||||||||||| || |||||||||||    
T  14737792 tttgactttattttatcttttgttatagaaataacttagcacatatatgataagtgcttaattaagctgcttatccaaaca 14737872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 391 - 422
Target Start/End: Original strand, 6933117 - 6933148
Alignment:
Q  391 ataagtgcttaattaagttgtttatccaaaca 422  Q
    ||||||||||||||||||||||||||||||||    
T  6933117 ataagtgcttaattaagttgtttatccaaaca 6933148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 391 - 422
Target Start/End: Complemental strand, 32555735 - 32555704
Alignment:
Q  391 ataagtgcttaattaagttgtttatccaaaca 422  Q
    ||||||||||||||||||||||||||||||||    
T  32555735 ataagtgcttaattaagttgtttatccaaaca 32555704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 391 - 422
Target Start/End: Original strand, 48146173 - 48146204
Alignment:
Q  391 ataagtgcttaattaagttgtttatccaaaca 422  Q
    ||||||||||||||||||||||||||||||||    
T  48146173 ataagtgcttaattaagttgtttatccaaaca 48146204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 389
Target Start/End: Original strand, 46499941 - 46499983
Alignment:
Q  347 tttgactttattctatcttttgttatagaaataggttatagat 389  Q
    |||||||||||| |||||||| |||||||||||| ||||||||    
T  46499941 tttgactttattttatcttttcttatagaaatagcttatagat 46499983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 386
Target Start/End: Complemental strand, 50319274 - 50319236
Alignment:
Q  348 ttgactttattctatcttttgttatagaaataggttata 386  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  50319274 ttgactttattttatcttttgttatagaaatagcttata 50319236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 390 - 422
Target Start/End: Original strand, 4019748 - 4019780
Alignment:
Q  390 cataagtgcttaattaagttgtttatccaaaca 422  Q
    |||||||||| ||||||||||||||||||||||    
T  4019748 cataagtgctaaattaagttgtttatccaaaca 4019780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 379
Target Start/End: Complemental strand, 15360877 - 15360845
Alignment:
Q  347 tttgactttattctatcttttgttatagaaata 379  Q
    |||||||||||| ||||||||||||||||||||    
T  15360877 tttgactttattttatcttttgttatagaaata 15360845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 379
Target Start/End: Complemental strand, 36641858 - 36641826
Alignment:
Q  347 tttgactttattctatcttttgttatagaaata 379  Q
    |||||||||||| ||||||||||||||||||||    
T  36641858 tttgactttattttatcttttgttatagaaata 36641826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 379
Target Start/End: Complemental strand, 49517053 - 49517021
Alignment:
Q  347 tttgactttattctatcttttgttatagaaata 379  Q
    |||||||||||| ||||||||||||||||||||    
T  49517053 tttgactttattttatcttttgttatagaaata 49517021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 347 - 386
Target Start/End: Original strand, 1161 - 1200
Alignment:
Q  347 tttgactttattctatcttttgttatagaaataggttata 386  Q
    |||||||||||| ||||||||||||||||||||| |||||    
T  1161 tttgactttattttatcttttgttatagaaatagcttata 1200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 347 - 386
Target Start/End: Complemental strand, 2814 - 2775
Alignment:
Q  347 tttgactttattctatcttttgttatagaaataggttata 386  Q
    |||||||||||| ||||||||||||||||||||| |||||    
T  2814 tttgactttattttatcttttgttatagaaatagcttata 2775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 32; Significance: 0.000000009; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 351 - 386
Target Start/End: Original strand, 30338683 - 30338718
Alignment:
Q  351 actttattctatcttttgttatagaaataggttata 386  Q
    |||||||||||||||||||||||||||||| |||||    
T  30338683 actttattctatcttttgttatagaaatagtttata 30338718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 347 - 386
Target Start/End: Original strand, 51044546 - 51044585
Alignment:
Q  347 tttgactttattctatcttttgttatagaaataggttata 386  Q
    |||||||||||| ||||||||||||||||||||| |||||    
T  51044546 tttgactttattttatcttttgttatagaaatagcttata 51044585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 378
Target Start/End: Original strand, 9319283 - 9319313
Alignment:
Q  348 ttgactttattctatcttttgttatagaaat 378  Q
    |||||||||||||||||||||||||||||||    
T  9319283 ttgactttattctatcttttgttatagaaat 9319313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 385
Target Start/End: Complemental strand, 10192267 - 10192229
Alignment:
Q  347 tttgactttattctatcttttgttatagaaataggttat 385  Q
    ||||||||||||||||||||||||||| |||||| ||||    
T  10192267 tttgactttattctatcttttgttataaaaatagtttat 10192229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 380
Target Start/End: Complemental strand, 4071865 - 4071832
Alignment:
Q  347 tttgactttattctatcttttgttatagaaatag 380  Q
    |||||||||||| |||||||||||||||||||||    
T  4071865 tttgactttattttatcttttgttatagaaatag 4071832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 391 - 420
Target Start/End: Complemental strand, 7730542 - 7730513
Alignment:
Q  391 ataagtgcttaattaagttgtttatccaaa 420  Q
    ||||||||||||||||||||||||||||||    
T  7730542 ataagtgcttaattaagttgtttatccaaa 7730513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 380
Target Start/End: Original strand, 20936089 - 20936122
Alignment:
Q  347 tttgactttattctatcttttgttatagaaatag 380  Q
    |||||||||||| |||||||||||||||||||||    
T  20936089 tttgactttattttatcttttgttatagaaatag 20936122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 391 - 420
Target Start/End: Original strand, 41162211 - 41162240
Alignment:
Q  391 ataagtgcttaattaagttgtttatccaaa 420  Q
    ||||||||||||||||||||||||||||||    
T  41162211 ataagtgcttaattaagttgtttatccaaa 41162240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 401
Target Start/End: Complemental strand, 6364128 - 6364081
Alignment:
Q  351 actttattctatcttttgttatagaaataggttatagatcataagtgctta 401  Q
    |||||||| ||||||||||||||||||||| |||||   ||||||||||||    
T  6364128 actttattttatcttttgttatagaaatagcttata---cataagtgctta 6364081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 379
Target Start/End: Complemental strand, 19422401 - 19422369
Alignment:
Q  347 tttgactttattctatcttttgttatagaaata 379  Q
    |||||||||||| ||||||||||||||||||||    
T  19422401 tttgactttattatatcttttgttatagaaata 19422369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 394 - 422
Target Start/End: Complemental strand, 52645600 - 52645572
Alignment:
Q  394 agtgcttaattaagttgtttatccaaaca 422  Q
    |||||||||||||||||||||||||||||    
T  52645600 agtgcttaattaagttgtttatccaaaca 52645572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 30; Significance: 0.0000001; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 389
Target Start/End: Original strand, 281936 - 281977
Alignment:
Q  348 ttgactttattctatcttttgttatagaaataggttatagat 389  Q
    ||||||||||| ||||||||||||||| ||||| ||||||||    
T  281936 ttgactttattttatcttttgttataggaatagcttatagat 281977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 391 - 420
Target Start/End: Original strand, 2023787 - 2023816
Alignment:
Q  391 ataagtgcttaattaagttgtttatccaaa 420  Q
    ||||||||||||||||||||||||||||||    
T  2023787 ataagtgcttaattaagttgtttatccaaa 2023816  T

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Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 380
Target Start/End: Complemental strand, 30865465 - 30865432
Alignment:
Q  347 tttgactttattctatcttttgttatagaaatag 380  Q
    |||||||||||| |||||||||||||||||||||    
T  30865465 tttgactttattttatcttttgttatagaaatag 30865432  T

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Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 379
Target Start/End: Complemental strand, 5328957 - 5328925
Alignment:
Q  347 tttgactttattctatcttttgttatagaaata 379  Q
    |||||||||||| ||||||||||||||||||||    
T  5328957 tttgactttattttatcttttgttatagaaata 5328925  T

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Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 379
Target Start/End: Original strand, 24836286 - 24836318
Alignment:
Q  347 tttgactttattctatcttttgttatagaaata 379  Q
    |||||||||||| ||||||||||||||||||||    
T  24836286 tttgactttattttatcttttgttatagaaata 24836318  T

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