View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19530_low_57 (Length: 416)

Name: NF19530_low_57
Description: NF19530
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19530_low_57
NF19530_low_57
[»] chr1 (31 HSPs)
chr1 (19-406)||(40073465-40073832)
chr1 (187-276)||(40073081-40073170)
chr1 (189-267)||(6237962-6238040)
chr1 (200-274)||(22826750-22826824)
chr1 (189-274)||(6238331-6238416)
chr1 (282-406)||(47086299-47086423)
chr1 (280-406)||(22826765-22826890)
chr1 (280-398)||(803487-803605)
chr1 (190-274)||(19863167-19863251)
chr1 (183-274)||(40196829-40196920)
chr1 (189-274)||(21428051-21428137)
chr1 (304-400)||(22892732-22892828)
chr1 (280-336)||(40073086-40073142)
chr1 (280-375)||(47377824-47377922)
chr1 (189-257)||(47377880-47377948)
chr1 (359-400)||(2997155-2997196)
chr1 (237-274)||(7171762-7171799)
chr1 (314-406)||(6238143-6238234)
chr1 (280-348)||(6238357-6238425)
chr1 (189-229)||(36636846-36636886)
chr1 (292-343)||(40196873-40196924)
chr1 (289-372)||(45395544-45395627)
chr1 (236-274)||(5222719-5222757)
chr1 (280-326)||(6237988-6238034)
chr1 (189-274)||(38870942-38871028)
chr1 (189-274)||(38871148-38871234)
chr1 (278-372)||(38871173-38871267)
chr1 (217-274)||(47086299-47086356)
chr1 (300-372)||(5222686-5222758)
chr1 (292-376)||(15392013-15392097)
chr1 (300-400)||(39648918-39649017)
[»] chr8 (31 HSPs)
chr8 (183-274)||(43901005-43901096)
chr8 (189-275)||(25186548-25186634)
chr8 (280-374)||(43901037-43901131)
chr8 (189-274)||(15968058-15968143)
chr8 (300-400)||(33435848-33435947)
chr8 (191-274)||(25186797-25186880)
chr8 (288-406)||(8056265-8056383)
chr8 (280-406)||(15968206-15968331)
chr8 (189-274)||(3895156-3895241)
chr8 (189-274)||(16051248-16051333)
chr8 (184-261)||(41456311-41456388)
chr8 (280-372)||(15968084-15968178)
chr8 (280-406)||(25186731-25186856)
chr8 (288-406)||(3895338-3895455)
chr8 (201-274)||(3895404-3895477)
chr8 (201-274)||(8056243-8056316)
chr8 (198-271)||(15968189-15968262)
chr8 (280-336)||(25186552-25186608)
chr8 (300-371)||(8056527-8056598)
chr8 (329-400)||(8559747-8559818)
chr8 (288-350)||(3895145-3895207)
chr8 (236-274)||(8056528-8056566)
chr8 (189-271)||(15968422-15968504)
chr8 (303-373)||(15968471-15968541)
chr8 (236-274)||(33435908-33435946)
chr8 (329-398)||(30065957-30066026)
chr8 (300-400)||(10989074-10989174)
chr8 (338-406)||(15967894-15967962)
chr8 (280-336)||(16051274-16051330)
chr8 (300-400)||(35561630-35561730)
chr8 (189-272)||(40902386-40902470)
[»] chr7 (41 HSPs)
chr7 (189-274)||(33833975-33834060)
chr7 (280-376)||(33834143-33834239)
chr7 (280-406)||(23390548-23390674)
chr7 (278-406)||(5266317-5266445)
chr7 (184-274)||(29646089-29646179)
chr7 (291-372)||(22841044-22841125)
chr7 (288-373)||(31357703-31357788)
chr7 (213-274)||(33834180-33834241)
chr7 (300-392)||(10903317-10903409)
chr7 (189-274)||(31357667-31357754)
chr7 (280-372)||(33833942-33834034)
chr7 (189-274)||(7832956-7833042)
chr7 (236-274)||(22841077-22841115)
chr7 (280-406)||(30768377-30768502)
chr7 (280-405)||(29646023-29646148)
chr7 (300-400)||(6783002-6783102)
chr7 (278-398)||(33855658-33855777)
chr7 (189-274)||(16565123-16565209)
chr7 (189-274)||(16600453-16600539)
chr7 (208-274)||(29645840-29645906)
chr7 (182-274)||(5266384-5266477)
chr7 (300-372)||(10903524-10903596)
chr7 (280-372)||(16564886-16564978)
chr7 (280-372)||(16600684-16600776)
chr7 (329-400)||(6751574-6751645)
chr7 (328-399)||(23821539-23821610)
chr7 (189-274)||(4257993-4258079)
chr7 (236-274)||(10903318-10903356)
chr7 (236-274)||(10903525-10903563)
chr7 (189-274)||(16564919-16565005)
chr7 (189-274)||(16600657-16600743)
chr7 (189-274)||(33855716-33855802)
chr7 (280-345)||(7832983-7833048)
chr7 (209-274)||(23390615-23390680)
chr7 (189-274)||(30768443-30768528)
chr7 (189-273)||(34590554-34590639)
chr7 (237-274)||(38948455-38948492)
chr7 (241-274)||(49040591-49040624)
chr7 (288-376)||(16565086-16565174)
chr7 (288-376)||(16600488-16600576)
chr7 (304-400)||(40703696-40703792)
[»] chr3 (51 HSPs)
chr3 (189-274)||(26926932-26927017)
chr3 (189-274)||(40926479-40926564)
chr3 (189-274)||(19984645-19984730)
chr3 (189-274)||(32034116-32034201)
chr3 (189-274)||(39269070-39269155)
chr3 (189-274)||(39269525-39269610)
chr3 (201-274)||(40926806-40926879)
chr3 (190-274)||(39018785-39018869)
chr3 (198-257)||(20737248-20737307)
chr3 (280-367)||(26926904-26926991)
chr3 (300-374)||(44367569-44367643)
chr3 (189-274)||(44367604-44367689)
chr3 (280-351)||(40926794-40926865)
chr3 (280-406)||(32515927-32516052)
chr3 (189-274)||(35011682-35011768)
chr3 (189-274)||(35011889-35011975)
chr3 (300-406)||(40926988-40927094)
chr3 (185-261)||(33799157-33799234)
chr3 (189-274)||(37039977-37040062)
chr3 (206-274)||(32515918-32515986)
chr3 (300-400)||(39956507-39956607)
chr3 (300-372)||(40926446-40926518)
chr3 (189-274)||(42637737-42637826)
chr3 (198-274)||(44367803-44367879)
chr3 (301-373)||(50338423-50338495)
chr3 (300-400)||(50692490-50692590)
chr3 (189-275)||(11414387-11414474)
chr3 (189-275)||(19820521-19820608)
chr3 (338-405)||(19984479-19984546)
chr3 (215-274)||(29763716-29763775)
chr3 (203-274)||(40927055-40927126)
chr3 (301-406)||(25578722-25578827)
chr3 (300-374)||(26915106-26915180)
chr3 (236-274)||(26915141-26915179)
chr3 (278-400)||(35015449-35015571)
chr3 (236-274)||(40926728-40926766)
chr3 (236-274)||(50338423-50338461)
chr3 (300-400)||(9264126-9264226)
chr3 (197-261)||(19984415-19984479)
chr3 (280-372)||(32034083-32034175)
chr3 (182-274)||(39268864-39268956)
chr3 (300-400)||(49477498-49477598)
chr3 (300-396)||(53640005-53640101)
chr3 (189-232)||(26927158-26927201)
chr3 (329-400)||(32034260-32034331)
chr3 (300-399)||(40926668-40926767)
chr3 (189-274)||(4029637-4029723)
chr3 (300-366)||(39269498-39269564)
chr3 (189-274)||(50203850-50203936)
chr3 (189-272)||(4191115-4191199)
chr3 (189-272)||(50692553-50692637)
[»] chr4 (31 HSPs)
chr4 (184-274)||(14115480-14115570)
chr4 (189-274)||(3640231-3640316)
chr4 (189-274)||(41743561-41743646)
chr4 (300-400)||(29113413-29113513)
chr4 (280-406)||(3640414-3640540)
chr4 (280-373)||(3640197-3640290)
chr4 (189-274)||(45684383-45684468)
chr4 (278-406)||(14945102-14945229)
chr4 (184-274)||(8304944-8305034)
chr4 (288-405)||(8304983-8305100)
chr4 (189-274)||(14115739-14115824)
chr4 (308-400)||(1923039-1923131)
chr4 (280-376)||(45684194-45684290)
chr4 (189-274)||(9758329-9758414)
chr4 (189-274)||(56511322-56511408)
chr4 (184-274)||(3640481-3640573)
chr4 (183-274)||(14945168-14945260)
chr4 (189-274)||(42561859-42561945)
chr4 (189-274)||(56511529-56511615)
chr4 (280-345)||(41743555-41743620)
chr4 (189-270)||(45684168-45684249)
chr4 (189-274)||(47491840-47491925)
chr4 (189-276)||(5488390-5488478)
chr4 (300-400)||(28245957-28246057)
chr4 (300-351)||(14115531-14115582)
chr4 (215-274)||(14944919-14944978)
chr4 (236-274)||(7892693-7892731)
chr4 (278-348)||(14944910-14944980)
chr4 (189-274)||(53863930-53864016)
chr4 (300-373)||(47491886-47491959)
chr4 (236-276)||(23350822-23350862)
[»] chr2 (25 HSPs)
chr2 (189-276)||(10485217-10485304)
chr2 (300-400)||(32667147-32667247)
chr2 (184-274)||(36264142-36264233)
chr2 (301-406)||(4721845-4721949)
chr2 (278-372)||(39386662-39386756)
chr2 (189-274)||(39386695-39386781)
chr2 (189-271)||(4721799-4721880)
chr2 (278-406)||(8044563-8044691)
chr2 (300-400)||(883641-883741)
chr2 (278-374)||(29676284-29676380)
chr2 (197-274)||(17264976-17265054)
chr2 (300-406)||(17265015-17265120)
chr2 (189-274)||(29676319-29676405)
chr2 (189-274)||(32667208-32667294)
chr2 (329-406)||(10485136-10485213)
chr2 (300-400)||(884021-884121)
chr2 (214-274)||(17265222-17265282)
chr2 (300-400)||(17727368-17727468)
chr2 (300-400)||(19860001-19860101)
chr2 (300-400)||(29695379-29695478)
chr2 (237-276)||(32667000-32667039)
chr2 (191-274)||(3435481-3435565)
chr2 (300-372)||(12431890-12431962)
chr2 (189-257)||(29676192-29676260)
chr2 (196-267)||(32810876-32810948)
[»] chr5 (11 HSPs)
chr5 (183-274)||(4563679-4563770)
chr5 (189-274)||(18873188-18873273)
chr5 (301-400)||(43490297-43490396)
chr5 (280-372)||(4563711-4563803)
chr5 (288-392)||(18873222-18873326)
chr5 (300-400)||(48144-48244)
chr5 (239-276)||(17135542-17135579)
chr5 (189-272)||(28358028-28358112)
chr5 (300-372)||(38376723-38376795)
chr5 (191-274)||(38376756-38376840)
chr5 (280-400)||(39268191-39268310)
[»] chr6 (17 HSPs)
chr6 (300-400)||(24558752-24558852)
chr6 (189-274)||(26394576-26394661)
chr6 (312-406)||(2923008-2923102)
chr6 (292-398)||(16590150-16590256)
chr6 (292-398)||(16605124-16605230)
chr6 (291-372)||(21110003-21110084)
chr6 (226-274)||(21110003-21110051)
chr6 (294-400)||(15102786-15102891)
chr6 (236-274)||(19291959-19291997)
chr6 (278-376)||(25999011-25999109)
chr6 (189-274)||(25999048-25999134)
chr6 (189-274)||(26098367-26098453)
chr6 (189-274)||(26098779-26098865)
chr6 (189-269)||(12134476-12134557)
chr6 (300-373)||(26394542-26394615)
chr6 (300-400)||(11313422-11313522)
chr6 (300-372)||(28149785-28149857)
[»] scaffold0434 (1 HSPs)
scaffold0434 (300-400)||(13477-13577)


Alignment Details
Target: chr1 (Bit Score: 282; Significance: 1e-158; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 19 - 406
Target Start/End: Complemental strand, 40073832 - 40073465
Alignment:
Q  19 agatcaagcctctaaccacattcttaaggaacctaagtcccttaccatttggattgatccactgttagtagcaaatgcatattcttactcatcaaatatg 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40073832 agatcaagcctctaaccacattcttaaggaacctaagtcccttaccatttggattgatccactgttagtagcaaatgcatattcttactcatcaaatatg 40073733  T
Q  119 aatcaggatatgactcatctcacttttcatattactcttttcttcaactgtccctgacccaacgattaaagaaatttgaggcctaacttatcctcaaaaa 218  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  40073732 aatcaggatatgactcatctcacttttcatattactcatttcttcaaccgtccctgacccaacgattaaagaaatttgaggcctaactcatcctcaaaaa 40073633  T
Q  219 ccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttatttgacaaaaccgattcataaagtggggattgtctcctctatata 318  Q
    | |||||||||                   ||||||||||||| ||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||    
T  40073632 ctggttcataa-------------------atataaactcttatcaagagtctta-ttgacaaaaccggttcataaggtggggattgtctcctctatata 40073553  T
Q  319 aaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagcactctttggcctttg 406  Q
    || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40073552 aactcttactaagagtctaatctatctgatatgaggcatgggtttttcccaatacacctccgtcacacctagcactctttggcctttg 40073465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 187 - 276
Target Start/End: Complemental strand, 40073170 - 40073081
Alignment:
Q  187 aagaaatttgaggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttattt 276  Q
    |||||||| || |||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  40073170 aagaaattggaagcctaactcatcctcaaaaaccggttcataaggtggagattgtctcctctatataaactcttaccaagagtcttattt 40073081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 189 - 267
Target Start/End: Original strand, 6237962 - 6238040
Alignment:
Q  189 gaaatttgaggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaaga 267  Q
    |||||| ||||||||||| ||||| |||||||||||||||||||   |||||||||||||||||||||||||| |||||    
T  6237962 gaaattggaggcctaactcatccttaaaaaccggttcataaggtgaggattgtctcctctatataaactcttatcaaga 6238040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 200 - 274
Target Start/End: Original strand, 22826750 - 22826824
Alignment:
Q  200 cctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    ||||||| ||||| |||||||||||||||||||   |||||||||||||||||||||||||| ||||||||||||    
T  22826750 cctaactgatccttaaaaaccggttcataaggtgaggattgtctcctctatataaactcttatcaagagtcttat 22826824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 6238331 - 6238416
Alignment:
Q  189 gaaatttgaggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||| ||||| ||||| ||||| |||||||||||||||||||   ||||| |||||||||||||||||||| || |||||||||    
T  6238331 gaaattggaggcataactcatccttaaaaaccggttcataaggtgaggattgcctcctctatataaactcttatcaggagtcttat 6238416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 282 - 406
Target Start/End: Original strand, 47086299 - 47086423
Alignment:
Q  282 aaccgattcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgt 381  Q
    ||||| ||||||| ||| ||| |||||| | |||||||| |||||  |||||||| ||||||||||| || | ||||| ||||| |||||||||| ||||    
T  47086299 aaccggttcataaggtgaggagtgtctcatgtatataaactcttatcaagagtcttatctatctgatgtgggacatggattttttccaatacacccccgt 47086398  T
Q  382 cacacctagcactctttggcctttg 406  Q
    ||| || | |||||||||| |||||    
T  47086399 cacgcccaacactctttgggctttg 47086423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 280 - 406
Target Start/End: Original strand, 22826765 - 22826890
Alignment:
Q  280 aaaaccgattcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatggg-tttttcccaatacacctc 378  Q
    ||||||| ||||||| ||| ||||||||||||||||||||| |||||  |||||||| ||||||| ||| || | |||||| ||||||||||||| |||     
T  22826765 aaaaccggttcataaggtgaggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgggttttttcccaatac-cct- 22826862  T
Q  379 cgtcacacctagcactctttggcctttg 406  Q
    |||||| || | |||||||||| |||||    
T  22826863 cgtcacgcccaacactctttgggctttg 22826890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 280 - 398
Target Start/End: Original strand, 803487 - 803605
Alignment:
Q  280 aaaaccgattcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctcc 379  Q
    ||||||| |||||||  || ||||||||||||||||||||| |  || ||||| ||| || |||||||| || | |||| |||||| |||||||||  ||    
T  803487 aaaaccggttcataagatgaggattgtctcctctatataaacttctattaagaatcttatatatctgatgtgggacatgagttttttccaatacactccc 803586  T
Q  380 gtcacacctagcactcttt 398  Q
    |||||||| ||||||||||    
T  803587 gtcacacccagcactcttt 803605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 190 - 274
Target Start/End: Complemental strand, 19863251 - 19863167
Alignment:
Q  190 aaatttgaggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    ||||| ||||||||||| ||| | ||||||| |||||||||||   |||||  ||||||||||||||||||| ||||||||||||    
T  19863251 aaattggaggcctaactcatcgttaaaaaccagttcataaggtgaggattgcttcctctatataaactcttatcaagagtcttat 19863167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 274
Target Start/End: Original strand, 40196829 - 40196920
Alignment:
Q  183 attaaagaaatttgaggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    ||||| |||||| | ||||||||| ||||| ||||||| |||  ||| ||   |||||||||||||||||||||||||| ||||||||||||    
T  40196829 attaatgaaattgggggcctaactcatccttaaaaaccagtttctaaagtgaggattgtctcctctatataaactcttatcaagagtcttat 40196920  T

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Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 21428051 - 21428137
Alignment:
Q  189 gaaatttgaggcctaacttatcctca-aaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    ||||||||||| |||||| ||||||| ||||||||||  ||||||   ||||||| ||| |||||||||||||| ||||||||||||    
T  21428051 gaaatttgagggctaactcatcctcacaaaaccggtttgtaaggtaaggattgtcacctttatataaactcttatcaagagtcttat 21428137  T

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Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 304 - 400
Target Start/End: Original strand, 22892732 - 22892828
Alignment:
Q  304 tgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagcactctttgg 400  Q
    |||||||||| |||||| ||| |  |||||||| || ||| |||| || | | |||||||||||||||||||||||||||| || | ||||||||||    
T  22892732 tgtctcctctttataaagtctcatcaagagtctcatttatttgatgtgggacttgggtttttcccaatacacctccgtcacgcccaacactctttgg 22892828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 336
Target Start/End: Complemental strand, 40073142 - 40073086
Alignment:
Q  280 aaaaccgattcataaagtggggattgtctcctctatataaaatcttactaagagtct 336  Q
    ||||||| ||||||| |||| |||||||||||||||||||| |||||| ||||||||    
T  40073142 aaaaccggttcataaggtggagattgtctcctctatataaactcttaccaagagtct 40073086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 375
Target Start/End: Complemental strand, 47377922 - 47377824
Alignment:
Q  280 aaaaccgattcataaagtggggattgtctcctctatataaaatcttact---aagagtctaatctatctgatatgtggcatgggtttttcccaatacac 375  Q
    ||||||| ||||||| ||| ||||||||||||||||||||| | ||| |   |||||||| ||||||| ||| || | |||| ||||||||||||||||    
T  47377922 aaaaccggttcataaggtgaggattgtctcctctatataaactattattatcaagagtcttatctatccgatgtgggacatgagtttttcccaatacac 47377824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 257
Target Start/End: Complemental strand, 47377948 - 47377880
Alignment:
Q  189 gaaatttgaggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaact 257  Q
    |||||| |||| |||| | ||||| |||||||||||||||||||   ||||||||||||||||||||||    
T  47377948 gaaattggaggtctaattcatccttaaaaaccggttcataaggtgaggattgtctcctctatataaact 47377880  T

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Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 359 - 400
Target Start/End: Original strand, 2997155 - 2997196
Alignment:
Q  359 ggtttttcccaatacacctccgtcacacctagcactctttgg 400  Q
    |||||||||||||||||||||||||| || ||||||||||||    
T  2997155 ggtttttcccaatacacctccgtcacgcccagcactctttgg 2997196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 7171799 - 7171762
Alignment:
Q  237 attgtctcctctatataaactcttaccaagagtcttat 274  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  7171799 attgtctcctctatataaacttttaccaagagtcttat 7171762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 406
Target Start/End: Original strand, 6238143 - 6238234
Alignment:
Q  314 atataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagcactctttggcctttg 406  Q
    ||||||| |||||| |||||||| ||||||| ||| || | |||||||||| |||||||||||   ||||| |||| |||||||||| |||||    
T  6238143 atataaactcttaccaagagtcttatctatccgatttgggacatgggtttt-cccaatacacccttgtcacgcctaacactctttgggctttg 6238234  T

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Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 348
Target Start/End: Original strand, 6238357 - 6238425
Alignment:
Q  280 aaaaccgattcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgat 348  Q
    ||||||| ||||||| ||| |||||| |||||||||||||| |||||  | |||||| |||||||||||    
T  6238357 aaaaccggttcataaggtgaggattgcctcctctatataaactcttatcaggagtcttatctatctgat 6238425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 229
Target Start/End: Complemental strand, 36636886 - 36636846
Alignment:
Q  189 gaaatttgaggcctaacttatcctcaaaaaccggttcataa 229  Q
    |||||| ||||||||||| ||||||||||||||||||||||    
T  36636886 gaaattggaggcctaactcatcctcaaaaaccggttcataa 36636846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 292 - 343
Target Start/End: Original strand, 40196873 - 40196924
Alignment:
Q  292 taaagtggggattgtctcctctatataaaatcttactaagagtctaatctat 343  Q
    ||||||| ||||||||||||||||||||| |||||  |||||||| ||||||    
T  40196873 taaagtgaggattgtctcctctatataaactcttatcaagagtcttatctat 40196924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 372
Target Start/End: Complemental strand, 45395627 - 45395544
Alignment:
Q  289 tcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaata 372  Q
    |||||| ||| ||| || ||||||  |||||| |||||  |||||||| |||||||||||||| | | ||||||||||||||||    
T  45395627 tcataacgtgaggagtgcctcctcattataaactcttatcaagagtcttatctatctgatatgggacttgggtttttcccaata 45395544  T

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Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 236 - 274
Target Start/End: Complemental strand, 5222757 - 5222719
Alignment:
Q  236 gattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  5222757 gattgtctcctctacataaactcttatcaagagtcttat 5222719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 326
Target Start/End: Original strand, 6237988 - 6238034
Alignment:
Q  280 aaaaccgattcataaagtggggattgtctcctctatataaaatctta 326  Q
    ||||||| ||||||| ||| ||||||||||||||||||||| |||||    
T  6237988 aaaaccggttcataaggtgaggattgtctcctctatataaactctta 6238034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 38870942 - 38871028
Alignment:
Q  189 gaaatttgaggcctaacttatcctca-aaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||||||||||||||| ||||| | ||||||||||| ||||||   || || |||| || |||||||| ||| ||||||||||||    
T  38870942 gaaatttgaggcctaactcatccttacaaaaccggttcttaaggtgaggagtgcctccactttataaacttttatcaagagtcttat 38871028  T

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Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 38871148 - 38871234
Alignment:
Q  189 gaaatttgaggcctaacttatcctca-aaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||||||||||||||  ||||| | ||||||||||| ||||||   || || ||||||| |||||||| ||| ||||||||||||    
T  38871148 gaaatttgaggcctaacgcatccttacaaaaccggttcttaaggtgaggagtgcctcctctttataaacttttatcaagagtcttat 38871234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 372
Target Start/End: Original strand, 38871173 - 38871267
Alignment:
Q  278 acaaaaccgattcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaata 372  Q
    ||||||||| ||| ||| ||| ||| || ||||||| |||||| | |||  |||||||| ||||||||||| || | | ||||||||||||||||    
T  38871173 acaaaaccggttcttaaggtgaggagtgcctcctctttataaacttttatcaagagtcttatctatctgatgtgggacttgggtttttcccaata 38871267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 274
Target Start/End: Original strand, 47086299 - 47086356
Alignment:
Q  217 aaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    ||||||||||||||||   || |||||| | |||||||||||||| ||||||||||||    
T  47086299 aaccggttcataaggtgaggagtgtctcatgtatataaactcttatcaagagtcttat 47086356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 372
Target Start/End: Complemental strand, 5222758 - 5222686
Alignment:
Q  300 ggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaata 372  Q
    ||||||||||||||| ||||| |||||  |||||||| ||||||| ||| || | | | ||||||||||||||    
T  5222758 ggattgtctcctctacataaactcttatcaagagtcttatctatcagatgtgggacttaggtttttcccaata 5222686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 376
Target Start/End: Complemental strand, 15392097 - 15392013
Alignment:
Q  292 taaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacc 376  Q
    ||||||| |||||| ||||||| |||| | ||||   |||||||| ||||||| ||| || | | ||||||||||||||||||||    
T  15392097 taaagtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaatacacc 15392013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 400
Target Start/End: Original strand, 39648918 - 39649017
Alignment:
Q  300 ggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagcactctttg 399  Q
    |||||| ||||||| |||||| ||||   |||||||| ||||||| ||| || | | |||||||||||||||||||| || |||| || | |||||||||    
T  39648918 ggattgcctcctctttataaactcttctcaagagtcttatctatc-gatgtgggacttgggtttttcccaatacacccccctcacgcccatcactctttg 39649016  T

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Target: chr8 (Bit Score: 60; Significance: 2e-25; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 183 - 274
Target Start/End: Original strand, 43901005 - 43901096
Alignment:
Q  183 attaaagaaatttgaggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    ||||| |||||| ||||||||||| ||||| |||||||||||||||||||   |||||||||||||||||||||||||| ||||||||||||    
T  43901005 attaatgaaattggaggcctaactcatccttaaaaaccggttcataaggtgaggattgtctcctctatataaactcttatcaagagtcttat 43901096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 189 - 275
Target Start/End: Complemental strand, 25186634 - 25186548
Alignment:
Q  189 gaaatttgaggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttatt 275  Q
    |||||| ||||||||||| ||||| |||||||||||||||||||   |||||||||||||||||||||| |||| ||||||||||||    
T  25186634 gaaattggaggcctaactcatccttaaaaaccggttcataaggtgaggattgtctcctctatataaacttttacaaagagtcttatt 25186548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 280 - 374
Target Start/End: Original strand, 43901037 - 43901131
Alignment:
Q  280 aaaaccgattcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaataca 374  Q
    ||||||| ||||||| ||| ||||||||||||||||||||| |||||  |||||||| ||||||| ||| || | ||||||||||||||||||||    
T  43901037 aaaaccggttcataaggtgaggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgggtttttcccaataca 43901131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 15968058 - 15968143
Alignment:
Q  189 gaaatttgaggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||| | ||||||||| ||||| |||||||||||||||||||   ||||||||||| |||||||||||||| ||||||||||||    
T  15968058 gaaattggcggcctaactcatccttaaaaaccggttcataaggtgaggattgtctcctttatataaactcttatcaagagtcttat 15968143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 300 - 400
Target Start/End: Complemental strand, 33435947 - 33435848
Alignment:
Q  300 ggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagcactctttg 399  Q
    |||||||||||| |||||||| |||||  |||||||| ||||||| ||| || | | |||||||||||||||||||| || |||||||||||||||||||    
T  33435947 ggattgtctcctttatataaactcttatcaagagtcttatctatccgatgtgggacttgggtttttcccaatacacc-ccctcacacctagcactctttg 33435849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 191 - 274
Target Start/End: Complemental strand, 25186880 - 25186797
Alignment:
Q  191 aatttgaggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||| ||||||||||| | ||| ||||||||||||||||| |  ||||||||||||||||||||||| ||| ||||||||||||    
T  25186880 aattggaggcctaactcaaccttaaaaaccggttcataagatgatgattgtctcctctatataaacttttatcaagagtcttat 25186797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 288 - 406
Target Start/End: Original strand, 8056265 - 8056383
Alignment:
Q  288 ttcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacc 387  Q
    ||||||| ||| |||||| |||||||||||||| |||||  |||||||| |||| || ||| || | |||||||||||| ||| ||||||| ||||| ||    
T  8056265 ttcataatgtgaggattgcctcctctatataaactcttatcaagagtcttatctttccgatgtgggacatgggtttttctcaacacacctctgtcacgcc 8056364  T
Q  388 tagcactctttggcctttg 406  Q
     |||||||||||| |||||    
T  8056365 cagcactctttgggctttg 8056383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 280 - 406
Target Start/End: Original strand, 15968206 - 15968331
Alignment:
Q  280 aaaaccgattcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctcc 379  Q
    ||||||| ||||||| ||| || ||| |||||||||||||| |||||  || ||||||||||||||||| || | |||||| |||||| |||||||| ||    
T  15968206 aaaaccggttcataaggtgagggttgcctcctctatataaactcttatcaaaagtctaatctatctgatgtgggacatggg-ttttccaaatacaccccc 15968304  T
Q  380 gtcacacctagcactctttggcctttg 406  Q
    ||||| ||  ||||||||||| |||||    
T  15968305 gtcacgccctgcactctttgggctttg 15968331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 189 - 274
Target Start/End: Complemental strand, 3895241 - 3895156
Alignment:
Q  189 gaaatttgaggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||| ||||||||||| |||||  |||||| |||||||||||   ||||| |||||||||||||||||||| ||||||||||||    
T  3895241 gaaattggaggcctaactcatccttgaaaaccagttcataaggtgaggattgcctcctctatataaactcttatcaagagtcttat 3895156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 16051248 - 16051333
Alignment:
Q  189 gaaatttgaggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||| ||||||||||| ||||| |||||||  ||||||||||   || ||||||||||||||||||||||| ||||||||||||    
T  16051248 gaaattggaggcctaactcatccttaaaaaccaattcataaggtgaggagtgtctcctctatataaactcttatcaagagtcttat 16051333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 184 - 261
Target Start/End: Original strand, 41456311 - 41456388
Alignment:
Q  184 ttaaagaaatttgaggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactctta 261  Q
    |||| |||||| ||||||||||| ||||| |||||||||||||| ||||   ||||||||||||||||||||||||||    
T  41456311 ttaatgaaattggaggcctaactcatccttaaaaaccggttcatcaggtgaggattgtctcctctatataaactctta 41456388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 280 - 372
Target Start/End: Original strand, 15968084 - 15968178
Alignment:
Q  280 aaaaccgattcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtgg--catgggtttttcccaata 372  Q
    ||||||| ||||||| ||| |||||||||||| |||||||| |||||  |||||||| ||| ||||||| || ||  ||||||||||||||||||    
T  15968084 aaaaccggttcataaggtgaggattgtctcctttatataaactcttatcaagagtcttatcaatctgatgtgggggacatgggtttttcccaata 15968178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 280 - 406
Target Start/End: Complemental strand, 25186856 - 25186731
Alignment:
Q  280 aaaaccgattcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctcc 379  Q
    ||||||| |||||||  ||  |||||||||||||||||||| | |||  |||||||| ||||||| ||| || | | | ||||||| |||||||| ||||    
T  25186856 aaaaccggttcataagatgatgattgtctcctctatataaacttttatcaagagtcttatctatccgatgtgggacttaggttttttccaataca-ctcc 25186758  T
Q  380 gtcacacctagcactctttggcctttg 406  Q
    ||||| || |||||||||||| |||||    
T  25186757 gtcacgcccagcactctttgggctttg 25186731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 406
Target Start/End: Complemental strand, 3895455 - 3895338
Alignment:
Q  288 ttcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacc 387  Q
    ||||||| ||| |||||| || ||||||||||| |||||  |||||||| ||||||| ||| |  | ||||||||||| |||||||||| |||||||  |    
T  3895455 ttcataaggtgaggattgccttctctatataaattcttatcaagagtcttatctatccgatgt-agacatgggttttttccaatacacccccgtcacgac 3895357  T
Q  388 tagcactctttggcctttg 406  Q
     | |||||||||| |||||    
T  3895356 caacactctttgggctttg 3895338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 201 - 274
Target Start/End: Complemental strand, 3895477 - 3895404
Alignment:
Q  201 ctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||| ||||| ||||| |||||||||||||   ||||| || ||||||||||| ||||| ||||||||||||    
T  3895477 ctaactcatccttaaaaatcggttcataaggtgaggattgccttctctatataaattcttatcaagagtcttat 3895404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 201 - 274
Target Start/End: Original strand, 8056243 - 8056316
Alignment:
Q  201 ctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||| ||||| || | ||||||||||| ||   ||||| |||||||||||||||||||| ||||||||||||    
T  8056243 ctaactcatccttaagagccggttcataatgtgaggattgcctcctctatataaactcttatcaagagtcttat 8056316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 198 - 271
Target Start/End: Original strand, 15968189 - 15968262
Alignment:
Q  198 ggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtct 271  Q
    ||||||||| | ||| |||||||||||||||||||   | ||| |||||||||||||||||||| ||| |||||    
T  15968189 ggcctaactcaaccttaaaaaccggttcataaggtgagggttgcctcctctatataaactcttatcaaaagtct 15968262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 336
Target Start/End: Complemental strand, 25186608 - 25186552
Alignment:
Q  280 aaaaccgattcataaagtggggattgtctcctctatataaaatcttactaagagtct 336  Q
    ||||||| ||||||| ||| ||||||||||||||||||||| | |||| ||||||||    
T  25186608 aaaaccggttcataaggtgaggattgtctcctctatataaacttttacaaagagtct 25186552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 300 - 371
Target Start/End: Original strand, 8056527 - 8056598
Alignment:
Q  300 ggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaat 371  Q
    |||||||||||||||||||||  ||||  |||||||| ||||||||||| || | |||| |||||| |||||    
T  8056527 ggattgtctcctctatataaacacttatcaagagtcttatctatctgatgtgggacatgtgttttttccaat 8056598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 329 - 400
Target Start/End: Original strand, 8559747 - 8559818
Alignment:
Q  329 aagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagcactctttgg 400  Q
    |||||||| ||||||| ||| || | | |||||||||||||||||||| || |||| || ||||||||||||    
T  8559747 aagagtcttatctatccgatgtgggacttgggtttttcccaatacacccccctcacgcccagcactctttgg 8559818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 350
Target Start/End: Complemental strand, 3895207 - 3895145
Alignment:
Q  288 ttcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatat 350  Q
    ||||||| ||| |||||| |||||||||||||| |||||  |||||||| ||||||| |||||    
T  3895207 ttcataaggtgaggattgcctcctctatataaactcttatcaagagtcttatctatccgatat 3895145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 236 - 274
Target Start/End: Original strand, 8056528 - 8056566
Alignment:
Q  236 gattgtctcctctatataaactcttaccaagagtcttat 274  Q
    ||||||||||||||||||||| |||| ||||||||||||    
T  8056528 gattgtctcctctatataaacacttatcaagagtcttat 8056566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 271
Target Start/End: Original strand, 15968422 - 15968504
Alignment:
Q  189 gaaatttgaggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtct 271  Q
    |||||| | ||||||||| | ||| ||||| ||||| |||||||   | |||||||||||| ||||||||||| |||||||||    
T  15968422 gaaattgggggcctaactcaaccttaaaaatcggtttataaggtgagggttgtctcctctaaataaactcttatcaagagtct 15968504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 373
Target Start/End: Original strand, 15968471 - 15968541
Alignment:
Q  303 ttgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatac 373  Q
    |||||||||||| ||||| |||||  |||||||||||||||  ||| || | ||||| |||||||||||||    
T  15968471 ttgtctcctctaaataaactcttatcaagagtctaatctatacgatgtgggacatggatttttcccaatac 15968541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 236 - 274
Target Start/End: Complemental strand, 33435946 - 33435908
Alignment:
Q  236 gattgtctcctctatataaactcttaccaagagtcttat 274  Q
    ||||||||||| |||||||||||||| ||||||||||||    
T  33435946 gattgtctcctttatataaactcttatcaagagtcttat 33435908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 398
Target Start/End: Complemental strand, 30066026 - 30065957
Alignment:
Q  329 aagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagcactcttt 398  Q
    |||||||| ||||||||||| || | | || ||||||||||||||||| ||||||| || | ||||||||    
T  30066026 aagagtcttatctatctgatgtgggacttgagtttttcccaatacacccccgtcacgcccaacactcttt 30065957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 400
Target Start/End: Original strand, 10989074 - 10989174
Alignment:
Q  300 ggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagcactctttg 399  Q
    |||||| ||||||| |||||| ||||   ||||||||  |||| ||||| || | | ||||||||| |||||||||| || |||| || |||||||||||    
T  10989074 ggattgcctcctctttataaactcttctcaagagtcttgtctacctgatgtgggacttgggttttttccaatacacccccctcacgcccagcactctttg 10989173  T
Q  400 g 400  Q
    |    
T  10989174 g 10989174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 406
Target Start/End: Original strand, 15967894 - 15967962
Alignment:
Q  338 atctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagcactctttggcctttg 406  Q
    ||||||| ||| || | ||||||||||||||||| |||||| ||| | || |||||||||||| |||||    
T  15967894 atctatccgatgtgggacatgggtttttcccaatccacctcggtcgcgcccagcactctttgggctttg 15967962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 336
Target Start/End: Original strand, 16051274 - 16051330
Alignment:
Q  280 aaaaccgattcataaagtggggattgtctcctctatataaaatcttactaagagtct 336  Q
    |||||| |||||||| ||| ||| ||||||||||||||||| |||||  ||||||||    
T  16051274 aaaaccaattcataaggtgaggagtgtctcctctatataaactcttatcaagagtct 16051330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 400
Target Start/End: Complemental strand, 35561730 - 35561630
Alignment:
Q  300 ggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagcactctttg 399  Q
    |||||| ||||||| |||||| ||||   |||| ||| ||||||| ||| || | | |||||||||||||| ||||| || |||| || |||||||||||    
T  35561730 ggattgcctcctctttataaactcttctcaagaatcttatctatccgatgtgggacttgggtttttcccaacacacccccctcacgcccagcactctttg 35561631  T
Q  400 g 400  Q
    |    
T  35561630 g 35561630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 272
Target Start/End: Original strand, 40902386 - 40902470
Alignment:
Q  189 gaaatttgaggcctaacttatcctca-aaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtctt 272  Q
    |||||||| ||||||||||||||| | |||||||| |  ||||||   ||||| ||||||| |||||||||||  ||||||||||    
T  40902386 gaaatttggggcctaacttatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtctt 40902470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 3e-24; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 189 - 274
Target Start/End: Complemental strand, 33834060 - 33833975
Alignment:
Q  189 gaaatttgaggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||| ||||||||||| ||||| |||||||||||||||||||   |||||||||||||||||||||||||| ||||||||||||    
T  33834060 gaaattggaggcctaactcatccttaaaaaccggttcataaggtgaggattgtctcctctatataaactcttatcaagagtcttat 33833975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 33834239 - 33834143
Alignment:
Q  280 aaaaccgattcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacc 376  Q
    ||||||| ||||||| ||| ||||||||||||||||||||| |||||  |||||||| ||||||||||| || | ||||| ||||||||||||||||    
T  33834239 aaaaccggttcataaggtgaggattgtctcctctatataaactcttatcaagagtcttatctatctgatgtgggacatggatttttcccaatacacc 33834143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 280 - 406
Target Start/End: Complemental strand, 23390674 - 23390548
Alignment:
Q  280 aaaaccgattcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctcc 379  Q
    ||||||||||||| | |||| ||||   ||||||||||||| |||||  |||||||| ||||||| ||| || | |||||||||||||||||||||| ||    
T  23390674 aaaaccgattcatcaggtggagattacttcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgggtttttcccaatacaccccc 23390575  T
Q  380 gtcacacctagcactctttggcctttg 406  Q
    ||||| || | |||||||||| |||||    
T  23390574 gtcacgcccaacactctttgggctttg 23390548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 278 - 406
Target Start/End: Complemental strand, 5266445 - 5266317
Alignment:
Q  278 acaaaaccgattcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacct 377  Q
    ||||||||| |||||||  || ||||||  ||||||||||||  |||||  |||||||| ||||||||||| || | ||||||||||||||||||||||     
T  5266445 acaaaaccggttcataagttgaggattggatcctctatataatctcttatcaagagtcttatctatctgatgtgggacatgggtttttcccaatacaccc 5266346  T
Q  378 ccgtcacacctagcactctttggcctttg 406  Q
    || |||| || | |||||||||| |||||    
T  5266345 ccatcacgcccaacactctttgggctttg 5266317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 184 - 274
Target Start/End: Complemental strand, 29646179 - 29646089
Alignment:
Q  184 ttaaagaaatttgaggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||| |||||| | ||||||||| ||||| |||||||||||||||||||   ||||| ||||||||||||||||| || ||||||||||||    
T  29646179 ttaatgaaattgggggcctaactcatccttaaaaaccggttcataaggtgaggattgcctcctctatataaactcctatcaagagtcttat 29646089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 291 - 372
Target Start/End: Complemental strand, 22841125 - 22841044
Alignment:
Q  291 ataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaata 372  Q
    |||| ||| ||||||||||||||||||||| |||||| |||||||| ||||||| ||| |  ||||||||||||||||||||    
T  22841125 ataaggtgaggattgtctcctctatataaactcttaccaagagtcttatctatccgatgtagggcatgggtttttcccaata 22841044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 288 - 373
Target Start/End: Original strand, 31357703 - 31357788
Alignment:
Q  288 ttcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatac 373  Q
    ||||||| ||| ||||||||||||||||||||| |||||  |||||||| ||||||| ||| || | |||||||||||||||||||    
T  31357703 ttcataaggtgaggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgggtttttcccaatac 31357788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 213 - 274
Target Start/End: Complemental strand, 33834241 - 33834180
Alignment:
Q  213 caaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    ||||||||||||||||||||   |||||||||||||||||||||||||| ||||||||||||    
T  33834241 caaaaaccggttcataaggtgaggattgtctcctctatataaactcttatcaagagtcttat 33834180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 300 - 392
Target Start/End: Original strand, 10903317 - 10903409
Alignment:
Q  300 ggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagca 392  Q
    |||||| |||||||||||||| |||||  |||||||| ||||||| ||| || | |||| ||||||||||||||||| ||||||| |||||||    
T  10903317 ggattgcctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgtgtttttcccaatacacccccgtcacgcctagca 10903409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 31357667 - 31357754
Alignment:
Q  189 gaaatttgaggcctaacttatcct--caaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||||||||||||||| |||||  ||||| | | ||||||||||   |||||||||||||||||||||||||| ||||||||||||    
T  31357667 gaaatttgaggcctaactcatccttacaaaatcggcttcataaggtgaggattgtctcctctatataaactcttatcaagagtcttat 31357754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 372
Target Start/End: Complemental strand, 33834034 - 33833942
Alignment:
Q  280 aaaaccgattcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaata 372  Q
    ||||||| ||||||| ||| ||||||||||||||||||||| |||||  |||||||| ||||||| ||| || | ||||||||||| ||||||    
T  33834034 aaaaccggttcataaggtgaggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgggttttttccaata 33833942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 7832956 - 7833042
Alignment:
Q  189 gaaatttgaggcctaacttatcctcaaaa-accggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||| | ||||||||| ||||| |||| |||||||||||||||   ||||| ||||||||||||||||| || ||||||||||||    
T  7832956 gaaattgggggcctaactcatccttaaaaaaccggttcataaggtgaggattgcctcctctatataaactcctatcaagagtcttat 7833042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 236 - 274
Target Start/End: Complemental strand, 22841115 - 22841077
Alignment:
Q  236 gattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||||||||||||||||||||||||||||||||||||    
T  22841115 gattgtctcctctatataaactcttaccaagagtcttat 22841077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 280 - 406
Target Start/End: Complemental strand, 30768502 - 30768377
Alignment:
Q  280 aaaaccgattcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctcc 379  Q
    |||||| |||||| | ||| |||| |||||||||||||||| | |||  |||||||| ||||||| ||| || | |||| |||||||| |||||||| ||    
T  30768502 aaaaccaattcattaggtgaggatcgtctcctctatataaattattatcaagagtcttatctatccgatgtgggacatgagtttttcctaatacacc-cc 30768404  T
Q  380 gtcacacctagcactctttggcctttg 406  Q
    ||||| || | |||||||||| |||||    
T  30768403 gtcacgcccaacactctttgggctttg 30768377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 405
Target Start/End: Complemental strand, 29646148 - 29646023
Alignment:
Q  280 aaaaccgattcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctcc 379  Q
    ||||||| ||||||| ||| |||||| |||||||||||||| || ||  |||||||| |||||||  || || | ||||  |||||||||||||||| ||    
T  29646148 aaaaccggttcataaggtgaggattgcctcctctatataaactcctatcaagagtcttatctatccaatgtgggacatgaatttttcccaatacaccccc 29646049  T
Q  380 gtcacacctagcactctttggccttt 405  Q
    ||||  || | |||||||||| ||||    
T  29646048 gtcatgcccaacactctttgggcttt 29646023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 400
Target Start/End: Complemental strand, 6783102 - 6783002
Alignment:
Q  300 ggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagcactctttg 399  Q
    |||||| ||||||| |||||| ||||   |||||||| ||||||| ||| || | | |||||||||||||||||||| || |||| || |||||||||||    
T  6783102 ggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgagacttgggtttttcccaatacacccccctcacgcccagcactctttg 6783003  T
Q  400 g 400  Q
    |    
T  6783002 g 6783002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 398
Target Start/End: Complemental strand, 33855777 - 33855658
Alignment:
Q  278 acaaaaccgattcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacct 377  Q
    ||||||||| ||||||| ||| ||| |||||||||| |||||| | |||  | |||||| ||||||| ||| || | | ||||||||||||||||||||     
T  33855777 acaaaaccggttcataaggtgaggagtgtctcctctttataaactattatcatgagtcttatctatccgatgtgggacttgggtttttcccaatacacc- 33855679  T
Q  378 ccgtcacacctagcactcttt 398  Q
    || ||||||| | ||||||||    
T  33855678 ccctcacacccatcactcttt 33855658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 274
Target Start/End: Complemental strand, 16565209 - 16565123
Alignment:
Q  189 gaaatttgaggcctaacttatcc-tcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||||||||||||||| |||| | ||||| |||||||||||||   || || ||||| | |||||||||||| ||||||||||||    
T  16565209 gaaatttgaggcctaactcatccgtaaaaaatcggttcataaggtgaggagtgcctcctatttataaactcttatcaagagtcttat 16565123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 16600453 - 16600539
Alignment:
Q  189 gaaatttgaggcctaacttatcc-tcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||||||||||||||| |||| | ||||| |||||||||||||   || || ||||| | |||||||||||| ||||||||||||    
T  16600453 gaaatttgaggcctaactcatccgtaaaaaatcggttcataaggtgaggagtgcctcctatttataaactcttatcaagagtcttat 16600539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 274
Target Start/End: Complemental strand, 29645906 - 29645840
Alignment:
Q  208 atcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    ||||| |||||||||||||||||||   ||||| ||||| ||||||||||| || ||||||||||||    
T  29645906 atccttaaaaaccggttcataaggtgaggattgcctcctttatataaactcatatcaagagtcttat 29645840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 274
Target Start/End: Complemental strand, 5266477 - 5266384
Alignment:
Q  182 gattaaagaaatttgaggcctaacttatcctca-aaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||| |||||| |||| |||||| ||||| | |||||||||||||||| |   |||||  |||||||||||| |||||| ||||||||||||    
T  5266477 gattaatgaaattggaggtctaactcatccttacaaaaccggttcataagttgaggattggatcctctatataatctcttatcaagagtcttat 5266384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 372
Target Start/End: Original strand, 10903524 - 10903596
Alignment:
Q  300 ggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaata 372  Q
    |||||| |||||||||||||| |||||  |||||||| ||||||| ||| || | |||| |||||||||||||    
T  10903524 ggattgcctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgagtttttcccaata 10903596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 372
Target Start/End: Complemental strand, 16564978 - 16564886
Alignment:
Q  280 aaaaccgattcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaata 372  Q
    ||||||| ||||||| ||| ||| || ||||| | |||||| ||||| ||||||||| ||||||| ||| || | | ||||||||||||||||    
T  16564978 aaaaccggttcataaggtgaggagtgcctcctatttataaactcttattaagagtcttatctatccgatgtgggacttgggtttttcccaata 16564886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 372
Target Start/End: Original strand, 16600684 - 16600776
Alignment:
Q  280 aaaaccgattcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaata 372  Q
    ||||||| ||||||| ||| ||| || ||||| | |||||| ||||| ||||||||| ||||||| ||| || | | ||||||||||||||||    
T  16600684 aaaaccggttcataaggtgaggagtgcctcctatttataaactcttattaagagtcttatctatccgatgtgggacttgggtttttcccaata 16600776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 329 - 400
Target Start/End: Original strand, 6751574 - 6751645
Alignment:
Q  329 aagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagcactctttgg 400  Q
    |||||||| ||||||| ||| || | | |||||||||||||||||||| || |||| || ||||||||||||    
T  6751574 aagagtctcatctatccgatttgggacttgggtttttcccaatacacccccctcacgcccagcactctttgg 6751645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 328 - 399
Target Start/End: Original strand, 23821539 - 23821610
Alignment:
Q  328 taagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagcactctttg 399  Q
    ||||||||| |||||||  || || | | ||||||||||||||||||||||| |||| || |||||||||||    
T  23821539 taagagtctcatctatcctatgtgggacttgggtttttcccaatacacctccctcacgcccagcactctttg 23821610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 4257993 - 4258079
Alignment:
Q  189 gaaatttgaggcctaacttatcc-tcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||||||||||||||| |||| | |||||| ||||||||||||   || || ||||| |  ||||||||||| ||||||||||||    
T  4257993 gaaatttgaggcctaactcatccttaaaaaactggttcataaggtgaggagtgcctcctattgataaactcttatcaagagtcttat 4258079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 236 - 274
Target Start/End: Original strand, 10903318 - 10903356
Alignment:
Q  236 gattgtctcctctatataaactcttaccaagagtcttat 274  Q
    ||||| |||||||||||||||||||| ||||||||||||    
T  10903318 gattgcctcctctatataaactcttatcaagagtcttat 10903356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 236 - 274
Target Start/End: Original strand, 10903525 - 10903563
Alignment:
Q  236 gattgtctcctctatataaactcttaccaagagtcttat 274  Q
    ||||| |||||||||||||||||||| ||||||||||||    
T  10903525 gattgcctcctctatataaactcttatcaagagtcttat 10903563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 274
Target Start/End: Complemental strand, 16565005 - 16564919
Alignment:
Q  189 gaaatttgaggcctaacttatcctcaaaaa-ccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    ||||||| |||||||||| ||||| ||||| ||||||||||||||   || || ||||| | ||||||||||||  |||||||||||    
T  16565005 gaaatttaaggcctaactcatccttaaaaaaccggttcataaggtgaggagtgcctcctatttataaactcttattaagagtcttat 16564919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 16600657 - 16600743
Alignment:
Q  189 gaaatttgaggcctaacttatcctcaaaa-accggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    ||||||| |||||||||| ||||| |||| |||||||||||||||   || || ||||| | ||||||||||||  |||||||||||    
T  16600657 gaaatttaaggcctaactcatccttaaaaaaccggttcataaggtgaggagtgcctcctatttataaactcttattaagagtcttat 16600743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 274
Target Start/End: Complemental strand, 33855802 - 33855716
Alignment:
Q  189 gaaatttgaggcctaacttatcctca-aaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||||| ||||||||| || || | ||||||||||||||||||   || |||||||||| |||||||| ||| || |||||||||    
T  33855802 gaaatttggggcctaactcattcttacaaaaccggttcataaggtgaggagtgtctcctctttataaactattatcatgagtcttat 33855716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 7832983 - 7833048
Alignment:
Q  280 aaaaccgattcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatct 345  Q
    ||||||| ||||||| ||| |||||| |||||||||||||| || ||  |||||||| ||||||||    
T  7832983 aaaaccggttcataaggtgaggattgcctcctctatataaactcctatcaagagtcttatctatct 7833048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 23390680 - 23390615
Alignment:
Q  209 tcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||| |||||||| ||||| |||| | ||||   ||||||||||||||||||| ||||||||||||    
T  23390680 tccttaaaaaccgattcatcaggtggagattacttcctctatataaactcttatcaagagtcttat 23390615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 274
Target Start/End: Complemental strand, 30768528 - 30768443
Alignment:
Q  189 gaaatttgaggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||| || |||||||| ||||| |||||||  ||||| ||||   ||| |||||||||||||||| | ||| ||||||||||||    
T  30768528 gaaattggatgcctaactcatccttaaaaaccaattcattaggtgaggatcgtctcctctatataaattattatcaagagtcttat 30768443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 273
Target Start/End: Complemental strand, 34590639 - 34590554
Alignment:
Q  189 gaaatttgaggcctaacttatcctca-aaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtctta 273  Q
    |||||||| ||| ||||| ||||| | ||||||||||||||||||   || || ||||||| ||||||||||||  ||||||||||    
T  34590639 gaaatttggggcttaactcatccttacaaaaccggttcataaggtgaggagtgcctcctctttataaactcttatgaagagtctta 34590554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 38948455 - 38948492
Alignment:
Q  237 attgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||||||||||||||||||||||  |||||||||||    
T  38948455 attgtctcctctatataaactcttataaagagtcttat 38948492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 274
Target Start/End: Complemental strand, 49040624 - 49040591
Alignment:
Q  241 tctcctctatataaactcttaccaagagtcttat 274  Q
    ||||||||||||||||||||| ||||||||||||    
T  49040624 tctcctctatataaactcttatcaagagtcttat 49040591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 376
Target Start/End: Complemental strand, 16565174 - 16565086
Alignment:
Q  288 ttcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacc 376  Q
    ||||||| ||| ||| || ||||| | |||||| |||||  |||||||| ||||||| ||| || | | ||||||||||||||||||||    
T  16565174 ttcataaggtgaggagtgcctcctatttataaactcttatcaagagtcttatctatccgatgtgggacttgggtttttcccaatacacc 16565086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 376
Target Start/End: Original strand, 16600488 - 16600576
Alignment:
Q  288 ttcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacc 376  Q
    ||||||| ||| ||| || ||||| | |||||| |||||  |||||||| ||||||| ||| || | | ||||||||||||||||||||    
T  16600488 ttcataaggtgaggagtgcctcctatttataaactcttatcaagagtcttatctatccgatgtgggacttgggtttttcccaatacacc 16600576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 304 - 400
Target Start/End: Original strand, 40703696 - 40703792
Alignment:
Q  304 tgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagcactctttgg 400  Q
    |||||||||| |||||| ||| |  |||||||| || |||  ||| || | | ||| |||||| |||||||||||||||||||| | ||||||||||    
T  40703696 tgtctcctctttataaagtctcatcaagagtctcatttattcgatgtgggacttggttttttctcaatacacctccgtcacacccaacactctttgg 40703792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 3e-24; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 189 - 274
Target Start/End: Complemental strand, 26927017 - 26926932
Alignment:
Q  189 gaaatttgaggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||| ||||||||||| ||||| |||||||||||||||||||   |||||||||||||||||||||||||| ||||||||||||    
T  26927017 gaaattggaggcctaactcatccttaaaaaccggttcataaggtgaggattgtctcctctatataaactcttatcaagagtcttat 26926932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 189 - 274
Target Start/End: Complemental strand, 40926564 - 40926479
Alignment:
Q  189 gaaatttgaggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||| ||||||||||| ||||| |||||||||||| |||||    |||||||||||||||||||||||||| ||||||||||||    
T  40926564 gaaattggaggcctaactcatccttaaaaaccggttcttaaggagaggattgtctcctctatataaactcttatcaagagtcttat 40926479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 19984645 - 19984730
Alignment:
Q  189 gaaatttgaggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||| |||| |||||| ||||| |||||||||||||||||||   ||||||||  |||||||||||||||||||| ||||||||    
T  19984645 gaaattggaggtctaactcatccttaaaaaccggttcataaggtgaggattgtctagtctatataaactcttaccaaaagtcttat 19984730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 189 - 274
Target Start/End: Complemental strand, 32034201 - 32034116
Alignment:
Q  189 gaaatttgaggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||| |||| |||||| ||||| |||||||||||||||||||   ||||||||||| | |||||||||||| ||||||||||||    
T  32034201 gaaattggaggtctaactcatccttaaaaaccggttcataaggtgaggattgtctcctttgtataaactcttatcaagagtcttat 32034116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 189 - 274
Target Start/End: Complemental strand, 39269155 - 39269070
Alignment:
Q  189 gaaatttgaggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||| |||| |||||| ||||| |||||| ||||||||||||   ||||| |||||||||||||||||||| ||||||||||||    
T  39269155 gaaattggaggtctaactcatccttaaaaactggttcataaggtgaggattgcctcctctatataaactcttatcaagagtcttat 39269070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 189 - 274
Target Start/End: Complemental strand, 39269610 - 39269525
Alignment:
Q  189 gaaatttgaggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||| ||||||||||| ||| | ||||||| ||||||||| |   |||||||||||||||||||||||||| ||||||||||||    
T  39269610 gaaattggaggcctaactcatctttaaaaaccagttcataagttgaggattgtctcctctatataaactcttatcaagagtcttat 39269525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 201 - 274
Target Start/End: Complemental strand, 40926879 - 40926806
Alignment:
Q  201 ctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||| ||||| ||||||||||||||||||    |||||||||||||||||||||||||| ||||||||||||    
T  40926879 ctaactcatccttaaaaaccggttcataaggagaggattgtctcctctatataaactcttatcaagagtcttat 40926806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 190 - 274
Target Start/End: Original strand, 39018785 - 39018869
Alignment:
Q  190 aaatttgaggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    ||||| ||||||||||| ||||| |||||| |||||||||| |   ||||||||||||||||||||||| || ||||||||||||    
T  39018785 aaattggaggcctaactcatccttaaaaactggttcataagttgaggattgtctcctctatataaactcctatcaagagtcttat 39018869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 198 - 257
Target Start/End: Complemental strand, 20737307 - 20737248
Alignment:
Q  198 ggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaact 257  Q
    ||||||||| ||||| ||||||||||||||||||||| |||||| |||||||||||||||    
T  20737307 ggcctaactcatccttaaaaaccggttcataaggttgggattgtttcctctatataaact 20737248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 280 - 367
Target Start/End: Complemental strand, 26926991 - 26926904
Alignment:
Q  280 aaaaccgattcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcc 367  Q
    ||||||| ||||||| ||| ||||||||||||||||||||| |||||  |||||||| ||||||||||| || | ||||| |||||||    
T  26926991 aaaaccggttcataaggtgaggattgtctcctctatataaactcttatcaagagtcttatctatctgatgtgggacatggttttttcc 26926904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 300 - 374
Target Start/End: Complemental strand, 44367643 - 44367569
Alignment:
Q  300 ggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaataca 374  Q
    ||||||||||||||||||||| ||||   |||||||| |||||||||||||| | ||| ||||||||||||||||    
T  44367643 ggattgtctcctctatataaactcttctcaagagtcttatctatctgatatgagacatcggtttttcccaataca 44367569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 189 - 274
Target Start/End: Complemental strand, 44367689 - 44367604
Alignment:
Q  189 gaaatttgaggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||||||||||||||| |||||  |||| | ||||||||| |   |||||||||||||||||||||||||  ||||||||||||    
T  44367689 gaaatttgaggcctaactcatccttgaaaatcagttcataagttgaggattgtctcctctatataaactcttctcaagagtcttat 44367604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 280 - 351
Target Start/End: Complemental strand, 40926865 - 40926794
Alignment:
Q  280 aaaaccgattcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatg 351  Q
    ||||||| ||||||| | | ||||||||||||||||||||| |||||  |||||||| ||||||||||||||    
T  40926865 aaaaccggttcataaggagaggattgtctcctctatataaactcttatcaagagtcttatctatctgatatg 40926794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 280 - 406
Target Start/End: Original strand, 32515927 - 32516052
Alignment:
Q  280 aaaaccgattcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctcc 379  Q
    ||||||| |||||| ||||  |||| ||||||||||||||| || ||  |||||||| ||||||| ||| || | |||| | ||||||| ||||||  ||    
T  32515927 aaaaccggttcatatagtgatgattatctcctctatataaactcctatcaagagtcttatctatccgatgtgggacatgag-ttttccctatacacaccc 32516025  T
Q  380 gtcacacctagcactctttggcctttg 406  Q
    |||||||| |||||||||||| |||||    
T  32516026 gtcacacccagcactctttgggctttg 32516052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 189 - 274
Target Start/End: Complemental strand, 35011768 - 35011682
Alignment:
Q  189 gaaatttgaggcctaacttatcctca-aaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||||| ||||||||| ||||| | ||||||||||||||||||   || |||||||||| ||||| |||||| ||||||||||||    
T  35011768 gaaatttggggcctaactcatccttacaaaaccggttcataaggtgaggagtgtctcctctttataatctcttatcaagagtcttat 35011682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 189 - 274
Target Start/End: Complemental strand, 35011975 - 35011889
Alignment:
Q  189 gaaatttgaggcctaacttatcctca-aaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||||| ||||||||| ||||| | ||||||||||||||||||   || || ||||||| |||||||||||| ||||||||||||    
T  35011975 gaaatttggggcctaactcatccttacaaaaccggttcataaggtgaggagtgcctcctctttataaactcttatcaagagtcttat 35011889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 300 - 406
Target Start/End: Complemental strand, 40927094 - 40926988
Alignment:
Q  300 ggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagcactctttg 399  Q
    ||||||||||||||||||||| |||||  |||||||| ||||||| ||| || | ||||| |||||||| ||||| | ||||||  || | |||||||||    
T  40927094 ggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatggatttttcccgatacaaccccgtcaagcccatcactctttg 40926995  T
Q  400 gcctttg 406  Q
    | |||||    
T  40926994 ggctttg 40926988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 261
Target Start/End: Complemental strand, 33799234 - 33799157
Alignment:
Q  185 taaagaaatttgaggcctaacttatcctca-aaaaccggttcataaggttgtgattgtctcctctatataaactctta 261  Q
    |||||||||| |||| |||||| ||||| | |||| |||||||| |||||  ||||||||||||||||||||||||||    
T  33799234 taaagaaattggaggtctaactcatccttacaaaatcggttcatcaggttaggattgtctcctctatataaactctta 33799157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 37039977 - 37040062
Alignment:
Q  189 gaaatttgaggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||| ||||||||||| ||||| ||||||   ||||||||||    |||||||||||||||| |||||||| ||||||||||||    
T  37039977 gaaattggaggcctaactcatccttaaaaactaattcataaggtgagaattgtctcctctatattaactcttatcaagagtcttat 37040062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 274
Target Start/End: Original strand, 32515918 - 32515986
Alignment:
Q  206 ttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    ||||||| |||||||||||||||  ||  ||||| |||||||||||||||||| || ||||||||||||    
T  32515918 ttatccttaaaaaccggttcatatagtgatgattatctcctctatataaactcctatcaagagtcttat 32515986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 400
Target Start/End: Original strand, 39956507 - 39956607
Alignment:
Q  300 ggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagcactctttg 399  Q
    |||||||||||||| |||||| ||||  ||||| |||  |||||||||| || | | ||| |||||||||||||||| || |||| || |||||||||||    
T  39956507 ggattgtctcctctttataaactcttcttaagattcttgtctatctgatgtgggacttggatttttcccaatacacccccctcacgcccagcactctttg 39956606  T
Q  400 g 400  Q
    |    
T  39956607 g 39956607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 372
Target Start/End: Complemental strand, 40926518 - 40926446
Alignment:
Q  300 ggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaata 372  Q
    ||||||||||||||||||||| |||||  |||||||| ||||||| ||| || | |||| |||||||||||||    
T  40926518 ggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgtgtttttcccaata 40926446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 42637737 - 42637826
Alignment:
Q  189 gaaatttgaggcctaacttatcctcaaaaaccggttcataaggttgtgat----tgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||| |||| |||||| ||||| |||||||||||||||||||   |||    |||||||| |||||||||||||| ||||||||||||    
T  42637737 gaaattggaggtctaactcatccttaaaaaccggttcataaggtgaggattgtctgtctcctttatataaactcttatcaagagtcttat 42637826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 198 - 274
Target Start/End: Complemental strand, 44367879 - 44367803
Alignment:
Q  198 ggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    ||||||||| || || |||||| ||||||||||||   ||||| |||||||||||||||||||| ||||||| ||||    
T  44367879 ggcctaactaattcttaaaaactggttcataaggtgaggattgcctcctctatataaactcttatcaagagttttat 44367803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 373
Target Start/End: Original strand, 50338423 - 50338495
Alignment:
Q  301 gattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatac 373  Q
    |||||||||||||||||||| |||||  |||||||| |||||||||||||| | | || ||||||| ||||||    
T  50338423 gattgtctcctctatataaactcttatcaagagtcttatctatctgatatgagacttgagtttttctcaatac 50338495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 400
Target Start/End: Complemental strand, 50692590 - 50692490
Alignment:
Q  300 ggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagcactctttg 399  Q
    |||||| ||||||| |||||| |||||  ||||||||  |||||| ||| || | | |||||||||||||||||||| || |||| || |||||||||||    
T  50692590 ggattgcctcctctttataaactcttatcaagagtcttgtctatccgatgtgggacttgggtttttcccaatacacccccctcacgcccagcactctttg 50692491  T
Q  400 g 400  Q
    |    
T  50692490 g 50692490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 275
Target Start/End: Complemental strand, 11414474 - 11414387
Alignment:
Q  189 gaaatttgaggcctaacttatcctca-aaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttatt 275  Q
    |||||||||||||||||| ||||| | |||||||| |  ||||||   ||||||||||||| |||||||||||  |||||||||||||    
T  11414474 gaaatttgaggcctaactcatccttacaaaaccggcttctaaggtgaggattgtctcctctttataaactcttctcaagagtcttatt 11414387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 275
Target Start/End: Original strand, 19820521 - 19820608
Alignment:
Q  189 gaaatttgaggcctaacttatcctca-aaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttatt 275  Q
    |||||||||||||||||| ||||| | ||||||||||  ||||||   ||||||||||||| |||||||||||  ||||||| |||||    
T  19820521 gaaatttgaggcctaactcatccttacaaaaccggtttgtaaggtgaggattgtctcctctttataaactcttctcaagagttttatt 19820608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 405
Target Start/End: Original strand, 19984479 - 19984546
Alignment:
Q  338 atctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagcactctttggccttt 405  Q
    ||||||| ||| || | |||| ||||||||||||||||| |||||||||| |||||||||||| ||||    
T  19984479 atctatccgatgtgggacatgagtttttcccaatacacccccgtcacacccagcactctttgggcttt 19984546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 29763716 - 29763775
Alignment:
Q  215 aaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||||||||||||| | | || |||||||||| |||||||||||| ||||||||||||    
T  29763716 aaaaccggttcataagatggggagtgtctcctctttataaactcttatcaagagtcttat 29763775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 203 - 274
Target Start/End: Complemental strand, 40927126 - 40927055
Alignment:
Q  203 aacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||| ||||| ||||||  ||||||||| |   |||||||||||||||||||||||||| ||||||||||||    
T  40927126 aactcatccttaaaaactagttcataagatgaggattgtctcctctatataaactcttatcaagagtcttat 40927055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 406
Target Start/End: Original strand, 25578722 - 25578827
Alignment:
Q  301 gattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaataca-cctccgtcacacctagcactctttg 399  Q
    |||||||||||||||||||| |||||  || ||||| ||||||| ||| || | |||||||||||||||||||| || ||||||| || | |||| ||||    
T  25578722 gattgtctcctctatataaactcttatcaa-agtcttatctatccgatgtgggacatgggtttttcccaatacatcccccgtcacgccgaacactttttg 25578820  T
Q  400 gcctttg 406  Q
    | |||||    
T  25578821 ggctttg 25578827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 374
Target Start/End: Complemental strand, 26915180 - 26915106
Alignment:
Q  300 ggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaataca 374  Q
    ||||||||||||||||||||| |||||  |||||||| ||||||||||| || | | || |||||| ||||||||    
T  26915180 ggattgtctcctctatataaactcttatcaagagtcttatctatctgatctgggacttgagttttttccaataca 26915106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 236 - 274
Target Start/End: Complemental strand, 26915179 - 26915141
Alignment:
Q  236 gattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  26915179 gattgtctcctctatataaactcttatcaagagtcttat 26915141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 278 - 400
Target Start/End: Complemental strand, 35015571 - 35015449
Alignment:
Q  278 acaaaaccgattcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacct 377  Q
    |||||||||  | |||||||| |||||| ||||||| |||||| | |||  |||||| | ||||||| ||| || | | ||| ||||||||||||||||     
T  35015571 acaaaaccggcttataaagtgaggattgcctcctctttataaacttttatcaagagttttatctatccgatgtgggacttggctttttcccaatacaccc 35015472  T
Q  378 ccgtcacacctagcactctttgg 400  Q
    || |||| || ||||||||||||    
T  35015471 ccctcacgcccagcactctttgg 35015449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 236 - 274
Target Start/End: Complemental strand, 40926766 - 40926728
Alignment:
Q  236 gattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  40926766 gattgtctcctctatataaactcttatcaagagtcttat 40926728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 236 - 274
Target Start/End: Original strand, 50338423 - 50338461
Alignment:
Q  236 gattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  50338423 gattgtctcctctatataaactcttatcaagagtcttat 50338461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 400
Target Start/End: Original strand, 9264126 - 9264226
Alignment:
Q  300 ggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagcactctttg 399  Q
    |||||| ||||||| |||| | ||||   |||||||| ||||||| ||| || | | |||||||||||||||||||| || |||| || |||||||||||    
T  9264126 ggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaatacacccccctcacgcccagcactctttg 9264225  T
Q  400 g 400  Q
    |    
T  9264226 g 9264226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 261
Target Start/End: Original strand, 19984415 - 19984479
Alignment:
Q  197 aggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactctta 261  Q
    |||||||||| ||||| ||||||||| || ||||||   ||||| ||||||||||||||||||||    
T  19984415 aggcctaactcatccttaaaaaccggatcgtaaggtgcggattgcctcctctatataaactctta 19984479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 372
Target Start/End: Complemental strand, 32034175 - 32034083
Alignment:
Q  280 aaaaccgattcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaata 372  Q
    ||||||| ||||||| ||| |||||||||||| | |||||| |||||  |||||||| ||||||  ||| || | |||| |||||||||||||    
T  32034175 aaaaccggttcataaggtgaggattgtctcctttgtataaactcttatcaagagtcttatctattcgatgtgggacatgagtttttcccaata 32034083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 274
Target Start/End: Original strand, 39268864 - 39268956
Alignment:
Q  182 gattaaagaaatttgaggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||| |||||| |||| |||||| ||||| ||||||||||| |||||||   ||||  || |||||||||||||| || ||| ||||||||    
T  39268864 gattaaggaaattggaggtctaactcatccttaaaaaccggtttataaggtgaggattaccttctctatataaactcctatcaatagtcttat 39268956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 400
Target Start/End: Complemental strand, 49477598 - 49477498
Alignment:
Q  300 ggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagcactctttg 399  Q
    |||||| ||||||| |||||| ||||   |||||||| ||||||| ||| || | | |||||||||||||| ||||| || |||| || |||||||||||    
T  49477598 ggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaacacacccccctcacgcccagcactctttg 49477499  T
Q  400 g 400  Q
    |    
T  49477498 g 49477498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 396
Target Start/End: Original strand, 53640005 - 53640101
Alignment:
Q  300 ggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagcactct 396  Q
    |||||| ||||||| |||| | ||||   |||||||| ||||||| |||||| | | ||| |||||||||||||| | || ||||||||||||||||    
T  53640005 ggattgcctcctctttatatactcttgtcaagagtcttatctatccgatatgggacttggatttttcccaatacaaccccatcacacctagcactct 53640101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 189 - 232
Target Start/End: Complemental strand, 26927201 - 26927158
Alignment:
Q  189 gaaatttgaggcctaacttatcctcaaaaaccggttcataaggt 232  Q
    |||||| ||||||||||| ||||| |||||||||||||||||||    
T  26927201 gaaattggaggcctaactcatccttaaaaaccggttcataaggt 26927158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 329 - 400
Target Start/End: Complemental strand, 32034331 - 32034260
Alignment:
Q  329 aagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagcactctttgg 400  Q
    |||||||| ||||||| ||| || | ||| ||||||||| |||||||| ||||||| || ||||||||||||    
T  32034331 aagagtcttatctatccgatgtgggacataggtttttcctaatacacccccgtcacgcccagcactctttgg 32034260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 300 - 399
Target Start/End: Complemental strand, 40926767 - 40926668
Alignment:
Q  300 ggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagcactctttg 399  Q
    ||||||||||||||||||||| |||||  |||||||| ||||||| ||| || | ||| | ||||| |||||||| | | ||||| || | |||||||||    
T  40926767 ggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtgggacattgattttttccaatacaaccctgtcacgcccatcactctttg 40926668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 4029637 - 4029723
Alignment:
Q  189 gaaatttgaggcctaacttatcctca-aaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||||| ||||||||| ||||| | ||||||||||  ||||||   |||||| |||||| |||||||||||  ||||||||||||    
T  4029637 gaaatttggggcctaactcatccttacaaaaccggtttgtaaggtgaagattgtatcctctttataaactcttctcaagagtcttat 4029723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 366
Target Start/End: Complemental strand, 39269564 - 39269498
Alignment:
Q  300 ggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttc 366  Q
    ||||||||||||||||||||| |||||  |||||||| ||||||| ||| || | ||||| ||||||    
T  39269564 ggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatggatttttc 39269498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 50203850 - 50203936
Alignment:
Q  189 gaaatttgaggcctaacttatcctca-aaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||||| ||||||||| ||||| | |||||||||| |||||||   || || ||||||| |||||||||||  ||||||||||||    
T  50203850 gaaatttggggcctaactcatccttacaaaaccggtttataaggtgaggagtgcctcctctttataaactcttctcaagagtcttat 50203936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 272
Target Start/End: Original strand, 4191115 - 4191199
Alignment:
Q  189 gaaatttgaggcctaacttatcctca-aaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtctt 272  Q
    |||||||| ||||||||| ||||| | |||||||| |  ||||||   ||||||||||||| |||||||||||  ||||||||||    
T  4191115 gaaatttggggcctaactcatccttacaaaaccggcttgtaaggtcaggattgtctcctctttataaactcttctcaagagtctt 4191199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 272
Target Start/End: Complemental strand, 50692637 - 50692553
Alignment:
Q  189 gaaatttgaggcctaacttatcctca-aaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtctt 272  Q
    |||||||| ||||||||| ||||| | |||||||| |  ||||||   ||||| ||||||| |||||||||||| ||||||||||    
T  50692637 gaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttatcaagagtctt 50692553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 184 - 274
Target Start/End: Original strand, 14115480 - 14115570
Alignment:
Q  184 ttaaagaaatttgaggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||| |||||| ||||||||||| ||||| |||||| ||||||||||||   |||||||||||||||||||||||||| ||||||||||||    
T  14115480 ttaacgaaattggaggcctaactcatccttaaaaacaggttcataaggtaaggattgtctcctctatataaactcttatcaagagtcttat 14115570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 189 - 274
Target Start/End: Complemental strand, 3640316 - 3640231
Alignment:
Q  189 gaaatttgaggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||| ||||||||||| ||||| |||||||||||||||| ||   |||||||||||||||||||||||||| ||||||||||||    
T  3640316 gaaattagaggcctaactcatccttaaaaaccggttcataaagtgaggattgtctcctctatataaactcttatcaagagtcttat 3640231  T

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Target: chr4; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 189 - 274
Target Start/End: Complemental strand, 41743646 - 41743561
Alignment:
Q  189 gaaatttgaggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||| ||||||||||| ||||| |||||||||||||||||||   ||||| |||||||||||||||||||| ||||||||||||    
T  41743646 gaaattggaggcctaactcatccttaaaaaccggttcataaggtgaggattgcctcctctatataaactcttatcaagagtcttat 41743561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 300 - 400
Target Start/End: Complemental strand, 29113513 - 29113413
Alignment:
Q  300 ggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagcactctttg 399  Q
    |||||| ||||||| |||||| ||||   |||||||| ||||||||||| || | |||||||||||||||||||||| ||||||| || |||||||||||    
T  29113513 ggattgcctcctctttataaactcttctcaagagtcttatctatctgatgtgggacatgggtttttcccaatacacccccgtcacgcccagcactctttg 29113414  T
Q  400 g 400  Q
    |    
T  29113413 g 29113413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 280 - 406
Target Start/End: Complemental strand, 3640540 - 3640414
Alignment:
Q  280 aaaaccgattcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctcc 379  Q
    ||||||| |||| || ||| |||||| ||||||||| |||| |||||  |||||||| ||||||| ||| || |  ||| ||||||||||||||||| ||    
T  3640540 aaaaccggttcagaaggtgaggattgcctcctctatttaaactcttatcaagagtcttatctatccgatgtgggagatgagtttttcccaatacaccccc 3640441  T
Q  380 gtcacacctagcactctttggcctttg 406  Q
    ||||| || |||||||||||| |||||    
T  3640440 gtcacgcccagcactctttgggctttg 3640414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 280 - 373
Target Start/End: Complemental strand, 3640290 - 3640197
Alignment:
Q  280 aaaaccgattcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatac 373  Q
    ||||||| ||||||||||| ||||||||||||||||||||| |||||  |||||||| ||||||| ||  || | |||| ||||||||||||||    
T  3640290 aaaaccggttcataaagtgaggattgtctcctctatataaactcttatcaagagtcttatctatccgacgtgggacatgagtttttcccaatac 3640197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 45684383 - 45684468
Alignment:
Q  189 gaaatttgaggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||| ||||||||||| ||||| |||||| ||||||||||||   ||||| |||||| |||||| |||||||||||||||||||    
T  45684383 gaaattggaggcctaactcatccttaaaaactggttcataaggtgaggattgcctcctccatataagctcttaccaagagtcttat 45684468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 278 - 406
Target Start/End: Complemental strand, 14945229 - 14945102
Alignment:
Q  278 acaaaaccgattcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacct 377  Q
    ||||||||| ||||||| ||| ||||||  ||||||||||||| |||| | |||||||| ||||||| ||| || | |||| |||||||||||||||||     
T  14945229 acaaaaccggttcataaggtgaggattgcatcctctatataaactctttcgaagagtcttatctatccgatgtgggacatgtgtttttcccaatacacc- 14945131  T
Q  378 ccgtcacacctagcactctttggcctttg 406  Q
    |||||||  | | |||||||||| |||||    
T  14945130 ccgtcacgtccaacactctttgggctttg 14945102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 184 - 274
Target Start/End: Original strand, 8304944 - 8305034
Alignment:
Q  184 ttaaagaaatttgaggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||| |||||| ||||||| ||| || || ||||| |||||||||||||   |||||||||||||||||||||||||| ||| ||||||||    
T  8304944 ttaatgaaattggaggcctgactcattcttaaaaatcggttcataaggtgaggattgtctcctctatataaactcttatcaaaagtcttat 8305034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 405
Target Start/End: Original strand, 8304983 - 8305100
Alignment:
Q  288 ttcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacc 387  Q
    ||||||| ||| ||||||||||||||||||||| |||||  || ||||| ||||||| ||| |  | |||| ||||||||||||||||| ||||||| ||    
T  8304983 ttcataaggtgaggattgtctcctctatataaactcttatcaaaagtcttatctatccgatgtaggacatgagtttttcccaatacacccccgtcacgcc 8305082  T
Q  388 tagcactctttggccttt 405  Q
     | || ||||||| ||||    
T  8305083 aaacagtctttgggcttt 8305100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 14115739 - 14115824
Alignment:
Q  189 gaaatttgaggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||| |||||| |||| ||||| |||||||||||||||||||   |||||  ||||||||||||||||||| |||| |||||||    
T  14115739 gaaattggaggcccaactcatccttaaaaaccggttcataaggtgaggattgcatcctctatataaactcttatcaagtgtcttat 14115824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 308 - 400
Target Start/End: Original strand, 1923039 - 1923131
Alignment:
Q  308 tcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagcactctttgg 400  Q
    |||||| |||||| ||||   |||||||| ||||||||||| || | |||||||||||||||||||||| ||||||| || | ||||||||||    
T  1923039 tcctctttataaactcttctcaagagtcttatctatctgatgtgggacatgggtttttcccaatacacccccgtcacgcccaacactctttgg 1923131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 45684194 - 45684290
Alignment:
Q  280 aaaaccgattcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacc 376  Q
    ||||||||||||| | ||| ||||||||| ||||||||||| | |||  |||||||  ||||||| ||| || | ||||||||||||||||||||||    
T  45684194 aaaaccgattcatcaggtgaggattgtcttctctatataaacttttatcaagagtcgtatctatccgatgtgggacatgggtttttcccaatacacc 45684290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 189 - 274
Target Start/End: Complemental strand, 9758414 - 9758329
Alignment:
Q  189 gaaatttgaggcctaacttatcctcaaaaaccggttcataaggttgtga-ttgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||| |||||  |||||||||| |||||||||||| |||| | | || |||||||||||||||||||||||| ||||||||||||    
T  9758414 gaaattggaggctaaacttatccttaaaaaccggttcttaagat-gagagttgtctcctctatataaactcttatcaagagtcttat 9758329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 189 - 274
Target Start/End: Complemental strand, 56511408 - 56511322
Alignment:
Q  189 gaaatttgaggcctaacttatcctca-aaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||||| ||||||||| ||||| | ||||||||||||||||||   || || ||||||| |||||||||||| ||||||||||||    
T  56511408 gaaatttggggcctaactcatccttacaaaaccggttcataaggtgaggagtgcctcctctttataaactcttatcaagagtcttat 56511322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 274
Target Start/End: Complemental strand, 3640573 - 3640481
Alignment:
Q  184 ttaaagaaatttgaggcctaacttatcctcaaaaa--ccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||| |||||| ||||||||||| ||||| |||||  |||||||| |||||   ||||| ||||||||| |||||||||| ||||||||||||    
T  3640573 ttaatgaaattggaggcctaactcatccttaaaaaaaccggttcagaaggtgaggattgcctcctctatttaaactcttatcaagagtcttat 3640481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 274
Target Start/End: Complemental strand, 14945260 - 14945168
Alignment:
Q  183 attaaagaaatttgaggcctaacttatcctca-aaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    ||||| |||||| |||| |||||| ||||| | ||||||||||||||||||   |||||  |||||||||||||||||| | |||||||||||    
T  14945260 attaatgaaattggaggtctaactcatccttacaaaaccggttcataaggtgaggattgcatcctctatataaactctttcgaagagtcttat 14945168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 42561859 - 42561945
Alignment:
Q  189 gaaatttgaggcctaacttatcctcaaaaaccggttca-taaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||| ||||||||||| ||||| |||||  |||||| ||||||  |||||| |||||||||||||| | ||| ||||||||||||    
T  42561859 gaaattggaggcctaactcatccttaaaaattggttcaataaggtgatgattgcctcctctatataaaattttatcaagagtcttat 42561945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 274
Target Start/End: Complemental strand, 56511615 - 56511529
Alignment:
Q  189 gaaatttgaggcctaacttatcctca-aaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||||| ||||||||| ||||| | |||| |||||||||||||   || || ||||||| |||||||||||| ||||||||||||    
T  56511615 gaaatttggggcctaactcatccttacaaaatcggttcataaggtgaggagtgcctcctctttataaactcttatcaagagtcttat 56511529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 41743620 - 41743555
Alignment:
Q  280 aaaaccgattcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatct 345  Q
    ||||||| ||||||| ||| |||||| |||||||||||||| |||||  |||||||| ||||||||    
T  41743620 aaaaccggttcataaggtgaggattgcctcctctatataaactcttatcaagagtcttatctatct 41743555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 45684168 - 45684249
Alignment:
Q  189 gaaatttgaggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtc 270  Q
    |||||| ||||||||||| | ||| |||||||| ||||| ||||   |||||||| ||||||||||||| ||| ||||||||    
T  45684168 gaaattggaggcctaactcaaccttaaaaaccgattcatcaggtgaggattgtcttctctatataaacttttatcaagagtc 45684249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 47491840 - 47491925
Alignment:
Q  189 gaaatttgaggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||| ||||||||||| ||||| ||||||| |||| |||| |   ||||| ||||| ||||||||||| || ||||||||||||    
T  47491840 gaaattggaggcctaactcatccttaaaaaccagttcttaagttgaggattgcctcctttatataaactcctatcaagagtcttat 47491925  T

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Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 276
Target Start/End: Complemental strand, 5488478 - 5488390
Alignment:
Q  189 gaaatttgaggcctaacttatcctca-aaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttattt 276  Q
    |||||||||||||||||| ||||| | |||||||| |  ||||||   ||||| ||||||| |||||||||||  ||||||||||||||    
T  5488478 gaaatttgaggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttattt 5488390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 400
Target Start/End: Complemental strand, 28246057 - 28245957
Alignment:
Q  300 ggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagcactctttg 399  Q
    |||||| || |||| |||||| ||| |  |||||||| ||||||| ||| || | | |||||||||||||||||||| || |||| || |||||||||||    
T  28246057 ggattgccttctctttataaactctcatcaagagtctcatctatccgatgtgggacttgggtttttcccaatacacccccctcacgcccagcactctttg 28245958  T
Q  400 g 400  Q
    |    
T  28245957 g 28245957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 300 - 351
Target Start/End: Original strand, 14115531 - 14115582
Alignment:
Q  300 ggattgtctcctctatataaaatcttactaagagtctaatctatctgatatg 351  Q
    ||||||||||||||||||||| |||||  |||||||| ||||||| ||||||    
T  14115531 ggattgtctcctctatataaactcttatcaagagtcttatctatccgatatg 14115582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 274
Target Start/End: Complemental strand, 14944978 - 14944919
Alignment:
Q  215 aaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||| |||||||||||||   ||| | ||||||||| |||||||||||||||||||||||    
T  14944978 aaaaacggttcataaggtgaggatcgcctcctctatgtaaactcttaccaagagtcttat 14944919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 236 - 274
Target Start/End: Original strand, 7892693 - 7892731
Alignment:
Q  236 gattgtctcctctatataaactcttaccaagagtcttat 274  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  7892693 gattgtctcctctatataaactcatatcaagagtcttat 7892731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 348
Target Start/End: Complemental strand, 14944980 - 14944910
Alignment:
Q  278 acaaaaccgattcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgat 348  Q
    |||||| || ||||||| ||| |||| | ||||||||| |||| |||||| |||||||| |||||||||||    
T  14944980 acaaaaacggttcataaggtgaggatcgcctcctctatgtaaactcttaccaagagtcttatctatctgat 14944910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 274
Target Start/End: Complemental strand, 53864016 - 53863930
Alignment:
Q  189 gaaatttgaggcctaacttatcctca-aaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||||| || |||||| ||||| | ||||||||||||||||||   || |||||||||| |||||||| ||| ||| ||||||||    
T  53864016 gaaatttgtggtctaactcatccttacaaaaccggttcataaggtgaggagtgtctcctctttataaactattatcaaaagtcttat 53863930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 373
Target Start/End: Original strand, 47491886 - 47491959
Alignment:
Q  300 ggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatac 373  Q
    |||||| ||||| |||||||| || ||  |||||||| ||||||| ||| || | |||||||||||||||||||    
T  47491886 ggattgcctcctttatataaactcctatcaagagtcttatctatccgatgtgggacatgggtttttcccaatac 47491959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 236 - 276
Target Start/End: Complemental strand, 23350862 - 23350822
Alignment:
Q  236 gattgtctcctctatataaactcttaccaagagtcttattt 276  Q
    ||||||||||||| |||| ||||||| ||||||||||||||    
T  23350862 gattgtctcctctttatatactcttatcaagagtcttattt 23350822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 1e-20; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 189 - 276
Target Start/End: Complemental strand, 10485304 - 10485217
Alignment:
Q  189 gaaatttgaggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttattt 276  Q
    |||||| ||||||||||| ||||| |||||||||||| ||||||   |||||||||||||||||||||||| | ||||||||||||||    
T  10485304 gaaattggaggcctaactcatccttaaaaaccggttcgtaaggtgaggattgtctcctctatataaactctcatcaagagtcttattt 10485217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 300 - 400
Target Start/End: Complemental strand, 32667247 - 32667147
Alignment:
Q  300 ggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagcactctttg 399  Q
    |||||| |||||||||||||| |||||  |||||||| ||||||||||| || | | | |||||||||||||||||| ||||||| || |||||||||||    
T  32667247 ggattgcctcctctatataaactcttatcaagagtcttatctatctgatgtgggacttcggtttttcccaatacacccccgtcacgcccagcactctttg 32667148  T
Q  400 g 400  Q
    |    
T  32667147 g 32667147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 184 - 274
Target Start/End: Original strand, 36264142 - 36264233
Alignment:
Q  184 ttaaagaaatttgaggcctaacttatcctcaaaaaccggttcataaggttg-tgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||| |||||| ||||||||||| ||||| ||||||||||||||| |||||  ||||||| ||||||||||||| |||| ||||||||||||    
T  36264142 ttaatgaaattagaggcctaactcatccttaaaaaccggttcatagggttgaggattgtcacctctatataaacacttatcaagagtcttat 36264233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 301 - 406
Target Start/End: Original strand, 4721845 - 4721949
Alignment:
Q  301 gattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagcactctttgg 400  Q
    ||||| |||||||||||||| |||||  |||||||||||||||| ||| || | ||||||||||| |||||||||| | |||||||| |||| |||||||    
T  4721845 gattgcctcctctatataaactcttatcaagagtctaatctatccgatgtgggacatgggttttt-ccaatacaccccggtcacacccagcattctttgg 4721943  T
Q  401 cctttg 406  Q
     |||||    
T  4721944 gctttg 4721949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 278 - 372
Target Start/End: Complemental strand, 39386756 - 39386662
Alignment:
Q  278 acaaaaccgattcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaata 372  Q
    ||||||||  ||||||| ||| |||||| |||||||||||||| |||||  |||||||| ||||||| ||| || | ||||||||||||||||||    
T  39386756 acaaaaccagttcataaggtgaggattgcctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgggtttttcccaata 39386662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 189 - 274
Target Start/End: Complemental strand, 39386781 - 39386695
Alignment:
Q  189 gaaatttgaggcctaacttatcctca-aaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||| ||||||||||| ||||| | |||||| |||||||||||   ||||| |||||||||||||||||||| ||||||||||||    
T  39386781 gaaattggaggcctaactcatccttacaaaaccagttcataaggtgaggattgcctcctctatataaactcttatcaagagtcttat 39386695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 189 - 271
Target Start/End: Original strand, 4721799 - 4721880
Alignment:
Q  189 gaaatttgaggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtct 271  Q
    |||||||||||||||||| ||||| ||||   |||||||||| |  |||||| |||||||||||||||||||| |||||||||    
T  4721799 gaaatttgaggcctaactcatccttaaaatt-ggttcataagttgatgattgcctcctctatataaactcttatcaagagtct 4721880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 278 - 406
Target Start/End: Original strand, 8044563 - 8044691
Alignment:
Q  278 acaaaaccgattcataaagtggggattgtctcctctat-ataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacc 376  Q
    ||||||| | ||||||| ||| ||| || ||||||| | ||||| |||||  |||||||| |||||||||||  | | | ||||||||||||||||||||    
T  8044563 acaaaactggttcataaggtgaggagtgcctcctcttttataaactcttatcaagagtcttatctatctgatgcgggacttgggtttttcccaatacacc 8044662  T
Q  377 tccgtcacacctagcactctttggcctttg 406  Q
     || ||||||| |||||||||||| |||||    
T  8044663 -ccctcacacccagcactctttgggctttg 8044691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 400
Target Start/End: Original strand, 883641 - 883741
Alignment:
Q  300 ggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagcactctttg 399  Q
    |||||| ||||||| |||||| ||||   |||||||| ||||||| ||| || | | |||||||||||||||||||| || |||| || |||||||||||    
T  883641 ggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaatacacccccctcacgcccagcactctttg 883740  T
Q  400 g 400  Q
    |    
T  883741 g 883741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 374
Target Start/End: Complemental strand, 29676380 - 29676284
Alignment:
Q  278 acaaaaccgattcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaataca 374  Q
    ||||||||| ||| ||| ||| |||||| ||||| |||||||| |||||  |||||||| ||||||| ||| || | |||| |||||||||||||||    
T  29676380 acaaaaccggttcttaaggtgaggattgactcctatatataaactcttatcaagagtcttatctatccgatgtgagacatgtgtttttcccaataca 29676284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 274
Target Start/End: Original strand, 17264976 - 17265054
Alignment:
Q  197 aggcctaacttatcctcaaaaacc-ggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||||||| ||||| ||||| | ||||||| ||||   ||||| |||||||||||||||| ||||||||||||||||    
T  17264976 aggcctaactcatccttaaaaaactggttcatcaggtgaggattgcctcctctatataaacttttaccaagagtcttat 17265054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 406
Target Start/End: Original strand, 17265015 - 17265120
Alignment:
Q  300 ggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagcactctttg 399  Q
    |||||| |||||||||||||| | |||| |||||||| ||||||| ||| || | |||||| |||||||||||| || ||||||| |  | |||||||||    
T  17265015 ggattgcctcctctatataaacttttaccaagagtcttatctatccgatgtgggacatggg-ttttcccaatacgcccccgtcacgcacaacactctttg 17265113  T
Q  400 gcctttg 406  Q
    | |||||    
T  17265114 ggctttg 17265120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 274
Target Start/End: Complemental strand, 29676405 - 29676319
Alignment:
Q  189 gaaatttgaggcctaacttatcctca-aaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||| |||| |||||||| ||| | ||||||||||| ||||||   ||||| ||||| |||||||||||||| ||||||||||||    
T  29676405 gaaattggaggtctaacttaaccttacaaaaccggttcttaaggtgaggattgactcctatatataaactcttatcaagagtcttat 29676319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 274
Target Start/End: Complemental strand, 32667294 - 32667208
Alignment:
Q  189 gaaatttgaggcctaacttatcctca-aaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||||| ||||||||| ||||| | |||||||| |  ||||||   ||||| |||||||||||||||||||| ||||||||||||    
T  32667294 gaaatttggggcctaactcatccttacaaaaccggcttgtaaggtaaggattgcctcctctatataaactcttatcaagagtcttat 32667208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 329 - 406
Target Start/End: Complemental strand, 10485213 - 10485136
Alignment:
Q  329 aagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagcactctttggcctttg 406  Q
    |||||||| ||||||| ||| || | ||||| |||||||||||||||| | ||||| || |||||||||||| |||||    
T  10485213 aagagtcttatctatccgatgtgggacatggatttttcccaatacacccctgtcacgcccagcactctttgggctttg 10485136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 400
Target Start/End: Complemental strand, 884121 - 884021
Alignment:
Q  300 ggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagcactctttg 399  Q
    |||||| ||||||| |||| | ||||   |||||||| ||||||| ||| || | | |||||||||||||||||||| || |||| || |||||||||||    
T  884121 ggattgcctcctctttatatactcttctcaagagtctcatctatccgatgtgggacttgggtttttcccaatacacccccctcacgcccagcactctttg 884022  T
Q  400 g 400  Q
    |    
T  884021 g 884021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 17265282 - 17265222
Alignment:
Q  214 aaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    ||||| |||||||| ||||   |||||  ||||||||||||||||||||||||||||||||    
T  17265282 aaaaatcggttcatcaggtgaggattgcatcctctatataaactcttaccaagagtcttat 17265222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 400
Target Start/End: Complemental strand, 17727468 - 17727368
Alignment:
Q  300 ggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagcactctttg 399  Q
    |||||| || |||| |||||| ||||   |||||||| ||||||| ||| || | | |||||||||||||||||||| || |||| || |||||||||||    
T  17727468 ggattgccttctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaatacacccccctcacgcccagcactctttg 17727369  T
Q  400 g 400  Q
    |    
T  17727368 g 17727368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 400
Target Start/End: Complemental strand, 19860101 - 19860001
Alignment:
Q  300 ggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagcactctttg 399  Q
    |||||| ||||||| |||||| ||||   ||||||||  |||||| ||| || | | |||||||||||||||||||| || |||| || |||||||||||    
T  19860101 ggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaatacacccccctcacgcccagcactctttg 19860002  T
Q  400 g 400  Q
    |    
T  19860001 g 19860001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 400
Target Start/End: Original strand, 29695379 - 29695478
Alignment:
Q  300 ggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagcactctttg 399  Q
    ||||||||| |||| |||||| ||||   |||||||| ||||||| ||| || | | |||||||||||||||||||| || |||| || |||||||||||    
T  29695379 ggattgtctactctttataaactcttctcaagagtcttatctatccgatgtgagacttgggtttttcccaatacacc-ccctcacgcccagcactctttg 29695477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 237 - 276
Target Start/End: Complemental strand, 32667039 - 32667000
Alignment:
Q  237 attgtctcctctatataaactcttaccaagagtcttattt 276  Q
    |||| |||||||||||||||||||| ||||||||||||||    
T  32667039 attgcctcctctatataaactcttatcaagagtcttattt 32667000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 191 - 274
Target Start/End: Original strand, 3435481 - 3435565
Alignment:
Q  191 aatttgaggcctaacttatcctca-aaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||| ||||||||| ||||| | ||||||||||  ||||||   ||||| ||||||| |||||||||||  ||||||||||||    
T  3435481 aatttggggcctaactcatccttacaaaaccggtttgtaaggtgaggattgcctcctctgtataaactcttctcaagagtcttat 3435565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 372
Target Start/End: Complemental strand, 12431962 - 12431890
Alignment:
Q  300 ggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaata 372  Q
    |||||||||||||| |||||| ||||   |||||||| ||||||| ||| || | | ||||||||||||||||    
T  12431962 ggattgtctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaata 12431890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 257
Target Start/End: Complemental strand, 29676260 - 29676192
Alignment:
Q  189 gaaatttgaggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaact 257  Q
    |||||| |||| | |||||||||| ||||| | ||| |||||||   ||||||||||||||||||||||    
T  29676260 gaaattggaggtccaacttatccttaaaaatccgtttataaggtgaggattgtctcctctatataaact 29676192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 196 - 267
Target Start/End: Original strand, 32810876 - 32810948
Alignment:
Q  196 gaggcctaacttatcctca-aaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaaga 267  Q
    ||||||||||| |||| || |||||||| |  ||||||  |||||||||||||| |||||||||||| |||||    
T  32810876 gaggcctaactcatccccacaaaaccggcttgtaaggtgatgattgtctcctctttataaactcttatcaaga 32810948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 3e-18; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 183 - 274
Target Start/End: Original strand, 4563679 - 4563770
Alignment:
Q  183 attaaagaaatttgaggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    ||||| |||||| |||||||| || ||||| |||||||||||||||||||   ||||||||||||||| |||||||||| ||| ||||||||    
T  4563679 attaatgaaattggaggcctacctcatccttaaaaaccggttcataaggtgaggattgtctcctctatgtaaactcttatcaaaagtcttat 4563770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 18873188 - 18873273
Alignment:
Q  189 gaaatttgaggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||| |||| |||||| ||||| |||||| ||||||||||||   ||||| |||||||||||||||||||| ||| ||||||||    
T  18873188 gaaattggaggtctaactcatccttaaaaactggttcataaggtgaggattgcctcctctatataaactcttatcaatagtcttat 18873273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 400
Target Start/End: Original strand, 43490297 - 43490396
Alignment:
Q  301 gattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagcactctttgg 400  Q
    ||||||||||||| |||||| ||||   |||||||| ||||||| ||| || | | |||||||||||||||||||| || |||| || ||||||||||||    
T  43490297 gattgtctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaatacacccccctcacgcccagcactctttgg 43490396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 372
Target Start/End: Original strand, 4563711 - 4563803
Alignment:
Q  280 aaaaccgattcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaata 372  Q
    ||||||| ||||||| ||| |||||||||||||||| |||| |||||  || ||||| ||||||| ||| || | |||| |||||||||||||    
T  4563711 aaaaccggttcataaggtgaggattgtctcctctatgtaaactcttatcaaaagtcttatctatccgatgtgagacatgagtttttcccaata 4563803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 392
Target Start/End: Original strand, 18873222 - 18873326
Alignment:
Q  288 ttcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacc 387  Q
    ||||||| ||| |||||| |||||||||||||| |||||  || ||||| ||||||| ||| || | |||||| |||||||||| | |  ||||||||||    
T  18873222 ttcataaggtgaggattgcctcctctatataaactcttatcaatagtcttatctatccgatgtgggacatgggcttttcccaatcctcggccgtcacacc 18873321  T
Q  388 tagca 392  Q
    |||||    
T  18873322 tagca 18873326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 400
Target Start/End: Original strand, 48144 - 48244
Alignment:
Q  300 ggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagcactctttg 399  Q
    |||||| ||||||| |||||| ||||   ||||||||  |||||| ||| || | | |||||||||||||||||||| || |||| || |||||||||||    
T  48144 ggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaatacacccccctcacgcccagcactctttg 48243  T
Q  400 g 400  Q
    |    
T  48244 g 48244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 276
Target Start/End: Complemental strand, 17135579 - 17135542
Alignment:
Q  239 tgtctcctctatataaactcttaccaagagtcttattt 276  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  17135579 tgtctcctctttataaactcttatcaagagtcttattt 17135542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 272
Target Start/End: Original strand, 28358028 - 28358112
Alignment:
Q  189 gaaatttgaggcctaacttatcctca-aaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtctt 272  Q
    |||||||| ||||||||| ||||| | |||||||| |  ||||||   ||||||||||||| |||||||||||  ||||||||||    
T  28358028 gaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgtctcctctttataaactcttctcaagagtctt 28358112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 372
Target Start/End: Complemental strand, 38376795 - 38376723
Alignment:
Q  300 ggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaata 372  Q
    |||||||||||||| |||||| ||||   |||||||| ||||||| ||| || | | ||||||||||||||||    
T  38376795 ggattgtctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaata 38376723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 191 - 274
Target Start/End: Complemental strand, 38376840 - 38376756
Alignment:
Q  191 aatttgaggcctaacttatcctca-aaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||| ||||||||| ||||| | |||||||| |  ||||||   ||||||||||||| |||||||||||  ||||||||||||    
T  38376840 aatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgtctcctctttataaactcttctcaagagtcttat 38376756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 400
Target Start/End: Complemental strand, 39268310 - 39268191
Alignment:
Q  280 aaaaccgattcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctcc 379  Q
    ||||||| ||||||| ||| ||| || ||||  | |||||| |||||  |||||| | ||||||| ||| || | | |||||||||||||||||||| ||    
T  39268310 aaaaccggttcataaggtgaggagtgcctccaatttataaactcttatcaagagttttatctatccgatgtgggacttgggtttttcccaatacacc-cc 39268212  T
Q  380 gtcacacctagcactctttgg 400  Q
     |||| || ||||||||||||    
T  39268211 ctcacgcccagcactctttgg 39268191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 400
Target Start/End: Complemental strand, 24558852 - 24558752
Alignment:
Q  300 ggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagcactctttg 399  Q
    |||||||||||||| |||||| ||||   |||||||| ||||||| ||| || | ||| ||||||| |||||||||| ||||||| || |||||||||||    
T  24558852 ggattgtctcctctttataaactcttctaaagagtcttatctatccgatgtgagacataggttttttccaatacacccccgtcacgcccagcactctttg 24558753  T
Q  400 g 400  Q
    |    
T  24558752 g 24558752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 274
Target Start/End: Complemental strand, 26394661 - 26394576
Alignment:
Q  189 gaaatttgaggcctaacttatcctcaaaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||| ||||||||| | || || ||||| |||||| ||||||   ||||| |||||||||||||||||||| ||||||||||||    
T  26394661 gaaattggaggcctaagtcattcttaaaaatcggttcttaaggtgaggattgcctcctctatataaactcttatcaagagtcttat 26394576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 406
Target Start/End: Original strand, 2923008 - 2923102
Alignment:
Q  312 ctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagcactctttggcctttg 406  Q
    ||||||||| |||||  |||||||  ||||||| ||  || | |||| ||||||||||||||||| ||||||| || |||||||||||| |||||    
T  2923008 ctatataaactcttatcaagagtcatatctatccgacgtgggacatgagtttttcccaatacacccccgtcacgcccagcactctttgggctttg 2923102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 292 - 398
Target Start/End: Complemental strand, 16590256 - 16590150
Alignment:
Q  292 taaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagc 391  Q
    ||||||| |||||| ||||||| |||||| |||| | ||||||||  |||||| ||| || | | |||||||||||||||||||| || |||| || | |    
T  16590256 taaagtgaggattgcctcctctttataaattcttcccaagagtcttgtctatccgatgtgggacttgggtttttcccaatacacccccctcacgcccaac 16590157  T
Q  392 actcttt 398  Q
    |||||||    
T  16590156 actcttt 16590150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 292 - 398
Target Start/End: Original strand, 16605124 - 16605230
Alignment:
Q  292 taaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagc 391  Q
    ||||||| |||||| ||||||| |||||| |||| | ||||||||  |||||| ||| || | | |||||||||||||||||||| || |||| || | |    
T  16605124 taaagtgaggattgcctcctctttataaattcttcccaagagtcttgtctatccgatgtgggacttgggtttttcccaatacacccccctcacgcccaac 16605223  T
Q  392 actcttt 398  Q
    |||||||    
T  16605224 actcttt 16605230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 372
Target Start/End: Original strand, 21110003 - 21110084
Alignment:
Q  291 ataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaata 372  Q
    |||| |||||||||| |||||||||||||| |||||| |||| ||| ||||||| ||  || | |||||| |||||||||||    
T  21110003 ataaggtggggattgcctcctctatataaactcttaccaagaatcttatctatccgacgtgggacatgggattttcccaata 21110084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 274
Target Start/End: Original strand, 21110003 - 21110051
Alignment:
Q  226 ataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    ||||||| | ||||| |||||||||||||||||||||||||| ||||||    
T  21110003 ataaggtggggattgcctcctctatataaactcttaccaagaatcttat 21110051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 400
Target Start/End: Original strand, 15102786 - 15102891
Alignment:
Q  294 aagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagcac 393  Q
    ||||| ||| || ||||||| |||||| ||| |  |||||||| ||||||||||| || | | |||||||||||||||||||| | ||||| || | |||    
T  15102786 aagtgaggagtgactcctctttataaactctcatcaagagtctcatctatctgatgtg-gacttgggtttttcccaatacacccctgtcacgcccaacac 15102884  T
Q  394 tctttgg 400  Q
    |||||||    
T  15102885 tctttgg 15102891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 236 - 274
Target Start/End: Original strand, 19291959 - 19291997
Alignment:
Q  236 gattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||||||||||||| ||||||||| ||||||||||||    
T  19291959 gattgtctcctctatacaaactcttatcaagagtcttat 19291997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 376
Target Start/End: Complemental strand, 25999109 - 25999011
Alignment:
Q  278 acaaaaccgattcataaagtggggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacc 376  Q
    ||||||||| ||||||| ||| ||| |||||||||| |||||| | |||  | |||||| ||| ||| ||| || | | ||||||||||||||||||||    
T  25999109 acaaaaccggttcataaggtgaggagtgtctcctctttataaactattatcatgagtcttatcaatccgatgtgggacttgggtttttcccaatacacc 25999011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 274
Target Start/End: Complemental strand, 25999134 - 25999048
Alignment:
Q  189 gaaatttgaggcctaacttatcctca-aaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||||| ||||||||| || || | ||||||||||||||||||   || |||||||||| |||||||| ||| || |||||||||    
T  25999134 gaaatttggggcctaactcattcttacaaaaccggttcataaggtgaggagtgtctcctctttataaactattatcatgagtcttat 25999048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 274
Target Start/End: Complemental strand, 26098453 - 26098367
Alignment:
Q  189 gaaatttgaggcctaacttatcctca-aaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||||| ||||||||| ||||| | |||| |||||||||||||   || |||||||||| |||||||| ||| || |||||||||    
T  26098453 gaaatttggggcctaactcatccttacaaaagcggttcataaggtgaggagtgtctcctctttataaactattatcatgagtcttat 26098367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 274
Target Start/End: Complemental strand, 26098865 - 26098779
Alignment:
Q  189 gaaatttgaggcctaacttatcctca-aaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagtcttat 274  Q
    |||||||| ||||||||| || || | ||||||||||||||||||   || |||||||||| |||||||| ||| || |||||||||    
T  26098865 gaaatttggggcctaactcattcttacaaaaccggttcataaggtgaggagtgtctcctctttataaactattatcatgagtcttat 26098779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 12134476 - 12134557
Alignment:
Q  189 gaaatttgaggcctaacttatcctca-aaaaccggttcataaggttgtgattgtctcctctatataaactcttaccaagagt 269  Q
    |||||||| ||||||||| ||||| | ||||||||||  |||||||  || |||||||||| |||||||||||  |||||||    
T  12134476 gaaatttggggcctaactcatccttacaaaaccggtttgtaaggttaggagtgtctcctctttataaactcttctcaagagt 12134557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 373
Target Start/End: Complemental strand, 26394615 - 26394542
Alignment:
Q  300 ggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatac 373  Q
    |||||| |||||||||||||| |||||  |||||||| ||||||| ||| ||   |||| ||||||||||||||    
T  26394615 ggattgcctcctctatataaactcttatcaagagtcttatctatccgatgtggaacatgagtttttcccaatac 26394542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 400
Target Start/End: Original strand, 11313422 - 11313522
Alignment:
Q  300 ggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagcactctttg 399  Q
    |||||| ||||||| |||| | ||||   |||||||| ||||||| ||| || |   |||||||||||||||||||| || |||| || |||||||||||    
T  11313422 ggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgggatttgggtttttcccaatacacccccctcacgcccagcactctttg 11313521  T
Q  400 g 400  Q
    |    
T  11313522 g 11313522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 372
Target Start/End: Complemental strand, 28149857 - 28149785
Alignment:
Q  300 ggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaata 372  Q
    |||||| ||||||| |||||| |||||  |||||| | ||||||| ||| || | ||||||||||||||||||    
T  28149857 ggattgcctcctctttataaactcttatcaagagttttatctatccgatgtgggacatgggtttttcccaata 28149785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 400
Target Start/End: Complemental strand, 13577 - 13477
Alignment:
Q  300 ggattgtctcctctatataaaatcttactaagagtctaatctatctgatatgtggcatgggtttttcccaatacacctccgtcacacctagcactctttg 399  Q
    |||||| ||||||| |||||| ||||   ||||||||  |||||| ||| || | | |||||||||||||||||||| || |||| || |||||||||||    
T  13577 ggattgcctcctctttataaactcttctcaagagtcttgtctatccgatttgggacttgggtttttcccaatacacccccctcacgcccagcactctttg 13478  T
Q  400 g 400  Q
    |    
T  13477 g 13477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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