View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19531_low_10 (Length: 313)
Name: NF19531_low_10
Description: NF19531
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19531_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 282; Significance: 1e-158; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 8 - 297
Target Start/End: Complemental strand, 28530451 - 28530162
Alignment:
| Q |
8 |
aagcaaaggaatggtagaaaatctcctcacagacttaaacctcaatgcatcaatcatagccttccattggtgccctccatctcctcctcctggtgatgat |
107 |
Q |
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| T |
28530451 |
aagcaaaggaatgctagaaaatctcctcacagacttaaacctcaatgcatcaatcatagccttccattggtgccctccatctcctcctcctggtgatgat |
28530352 |
T |
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| Q |
108 |
ggtttacctccattgctgtagttgctgctccccgtgctgtcggaatctgaaataggtacctcaaatacacctcttggtgatgctgttggtgaatcattgt |
207 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28530351 |
ggtttacctccattgctgtagttgctgctccccgtgctgtcggaatccgaaataggtacctcaaatacacctcttggtgatgctgttggtgaatcattgt |
28530252 |
T |
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| Q |
208 |
tgttttcatttgcaaaaccaaactctttctttggattattgttattacccgttatcatatcgaccattctccatctcttttctttctttt |
297 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28530251 |
tgttttcatttgcaaaaccaaactctttctttggattattgttattacccgttatcatatcgaccattctccatctcttttctttctttt |
28530162 |
T |
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