View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19531_low_5 (Length: 397)

Name: NF19531_low_5
Description: NF19531
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19531_low_5
NF19531_low_5
[»] chr7 (62 HSPs)
chr7 (46-186)||(39979623-39979763)
chr7 (46-187)||(40847433-40847574)
chr7 (46-168)||(36636506-36636628)
chr7 (46-175)||(23232039-23232168)
chr7 (60-186)||(4514779-4514905)
chr7 (60-186)||(1824199-1824325)
chr7 (46-175)||(22486394-22486523)
chr7 (60-176)||(26577279-26577395)
chr7 (46-185)||(31425511-31425650)
chr7 (46-169)||(47523666-47523789)
chr7 (46-188)||(15014402-15014544)
chr7 (46-185)||(1907355-1907494)
chr7 (54-185)||(36993828-36993959)
chr7 (46-176)||(24140450-24140580)
chr7 (46-175)||(21917344-21917473)
chr7 (46-175)||(27806018-27806147)
chr7 (46-175)||(28800878-28801007)
chr7 (46-176)||(20174020-20174150)
chr7 (46-175)||(7733322-7733451)
chr7 (46-175)||(18217829-18217958)
chr7 (46-175)||(23577199-23577328)
chr7 (46-175)||(24605838-24605967)
chr7 (46-175)||(37135295-37135424)
chr7 (51-175)||(1842899-1843023)
chr7 (46-176)||(2457670-2457798)
chr7 (46-175)||(816201-816330)
chr7 (46-175)||(11036507-11036636)
chr7 (46-186)||(48933136-48933276)
chr7 (46-175)||(6849221-6849350)
chr7 (46-175)||(23750746-23750875)
chr7 (59-175)||(11852021-11852137)
chr7 (52-188)||(14786632-14786768)
chr7 (51-175)||(38057637-38057761)
chr7 (60-175)||(3872197-3872312)
chr7 (60-175)||(3904488-3904603)
chr7 (46-175)||(9698548-9698677)
chr7 (46-155)||(10050866-10050975)
chr7 (46-175)||(20429465-20429594)
chr7 (56-175)||(21623031-21623149)
chr7 (60-175)||(33427704-33427818)
chr7 (54-175)||(20923968-20924089)
chr7 (46-171)||(22501594-22501719)
chr7 (62-175)||(23539248-23539361)
chr7 (46-175)||(23699835-23699964)
chr7 (52-176)||(27304878-27305000)
chr7 (46-169)||(42926435-42926559)
chr7 (46-169)||(31042251-31042374)
chr7 (58-175)||(15969796-15969914)
chr7 (46-155)||(11890177-11890286)
chr7 (46-143)||(45664768-45664865)
chr7 (51-171)||(32267352-32267471)
chr7 (68-175)||(2650838-2650945)
chr7 (89-175)||(21871611-21871697)
chr7 (46-175)||(26415424-26415553)
chr7 (60-185)||(1821996-1822118)
chr7 (60-175)||(2093372-2093487)
chr7 (56-167)||(10222648-10222758)
chr7 (119-185)||(38090336-38090402)
chr7 (51-175)||(27130339-27130461)
chr7 (51-169)||(25777128-25777246)
chr7 (78-176)||(1841792-1841889)
chr7 (89-175)||(27132731-27132817)
[»] chr4 (61 HSPs)
chr4 (46-190)||(33914057-33914201)
chr4 (46-179)||(25147719-25147852)
chr4 (46-185)||(5399607-5399746)
chr4 (63-185)||(9058952-9059074)
chr4 (46-175)||(22168266-22168395)
chr4 (46-185)||(1638445-1638584)
chr4 (46-175)||(32175747-32175876)
chr4 (46-169)||(2275694-2275817)
chr4 (46-175)||(55309222-55309352)
chr4 (54-175)||(8878889-8879010)
chr4 (46-187)||(12071960-12072101)
chr4 (46-175)||(19839177-19839306)
chr4 (46-175)||(22128322-22128451)
chr4 (46-175)||(27040035-27040164)
chr4 (46-175)||(37378633-37378762)
chr4 (46-175)||(46286239-46286368)
chr4 (60-175)||(38619859-38619974)
chr4 (46-175)||(5473847-5473976)
chr4 (46-175)||(36689675-36689804)
chr4 (51-175)||(44783485-44783610)
chr4 (46-186)||(45532578-45532718)
chr4 (56-175)||(4586768-4586887)
chr4 (60-175)||(38645762-38645877)
chr4 (60-185)||(12105995-12106119)
chr4 (46-175)||(18051837-18051966)
chr4 (60-175)||(7111956-7112071)
chr4 (60-175)||(9670489-9670604)
chr4 (60-175)||(29625337-29625452)
chr4 (60-175)||(30507999-30508114)
chr4 (56-186)||(25026565-25026695)
chr4 (51-169)||(38223513-38223631)
chr4 (46-175)||(13564925-13565054)
chr4 (46-175)||(30268998-30269127)
chr4 (46-175)||(30283062-30283191)
chr4 (89-185)||(9238625-9238721)
chr4 (51-175)||(19680434-19680558)
chr4 (46-134)||(22156652-22156740)
chr4 (56-175)||(13028826-13028945)
chr4 (56-175)||(18714910-18715029)
chr4 (68-175)||(24682337-24682444)
chr4 (46-175)||(39234940-39235068)
chr4 (56-175)||(54539294-54539413)
chr4 (51-169)||(9913261-9913379)
chr4 (54-176)||(29238429-29238551)
chr4 (89-175)||(42055438-42055524)
chr4 (60-169)||(9239297-9239406)
chr4 (54-175)||(16915375-16915496)
chr4 (54-175)||(30568009-30568130)
chr4 (72-155)||(313611-313694)
chr4 (60-186)||(4606828-4606954)
chr4 (51-115)||(37761912-37761976)
chr4 (56-175)||(4627088-4627207)
chr4 (60-155)||(6553816-6553911)
chr4 (60-155)||(14944758-14944853)
chr4 (69-175)||(30420043-30420149)
chr4 (46-155)||(18744100-18744209)
chr4 (70-185)||(3613017-3613133)
chr4 (89-169)||(34557224-34557304)
chr4 (55-175)||(25225106-25225224)
chr4 (56-112)||(45091282-45091338)
chr4 (71-142)||(23104371-23104442)
[»] chr3 (88 HSPs)
chr3 (46-186)||(30219334-30219474)
chr3 (51-185)||(19610339-19610473)
chr3 (46-185)||(16299857-16299996)
chr3 (46-185)||(29215988-29216127)
chr3 (60-186)||(15063991-15064117)
chr3 (60-185)||(50665636-50665761)
chr3 (46-186)||(25882566-25882706)
chr3 (46-175)||(27449084-27449213)
chr3 (46-186)||(19269863-19270003)
chr3 (46-185)||(18091547-18091686)
chr3 (46-185)||(49915447-49915586)
chr3 (60-185)||(5744426-5744551)
chr3 (60-185)||(5781385-5781510)
chr3 (46-175)||(11915754-11915883)
chr3 (76-185)||(37283549-37283658)
chr3 (46-175)||(5260933-5261062)
chr3 (46-175)||(18104540-18104669)
chr3 (56-191)||(13921331-13921466)
chr3 (60-175)||(26098823-26098938)
chr3 (56-175)||(48404866-48404985)
chr3 (46-175)||(18539800-18539929)
chr3 (46-175)||(19223445-19223574)
chr3 (46-170)||(17762638-17762762)
chr3 (46-170)||(19063958-19064082)
chr3 (56-187)||(21088758-21088887)
chr3 (46-169)||(8428167-8428290)
chr3 (46-185)||(21020061-21020200)
chr3 (46-175)||(1628211-1628340)
chr3 (46-175)||(8110335-8110464)
chr3 (58-175)||(10941675-10941792)
chr3 (46-175)||(11007693-11007822)
chr3 (46-175)||(26390644-26390773)
chr3 (46-175)||(29704042-29704171)
chr3 (46-175)||(36543745-36543874)
chr3 (51-175)||(1310969-1311093)
chr3 (51-175)||(11837224-11837348)
chr3 (51-175)||(29956373-29956497)
chr3 (51-175)||(30005528-30005652)
chr3 (56-175)||(21816727-21816846)
chr3 (51-185)||(23217208-23217342)
chr3 (60-185)||(1745488-1745612)
chr3 (46-175)||(4393360-4393489)
chr3 (46-175)||(7623541-7623670)
chr3 (46-175)||(9652574-9652703)
chr3 (46-175)||(11085352-11085481)
chr3 (46-155)||(17582331-17582440)
chr3 (46-175)||(28389969-28390098)
chr3 (56-185)||(29236050-29236179)
chr3 (46-185)||(26830441-26830581)
chr3 (60-175)||(13905048-13905163)
chr3 (46-155)||(19545506-19545615)
chr3 (46-175)||(36564449-36564578)
chr3 (51-171)||(31250089-31250209)
chr3 (60-175)||(5565732-5565847)
chr3 (60-175)||(17269614-17269729)
chr3 (60-175)||(23773487-23773602)
chr3 (60-175)||(43329773-43329888)
chr3 (60-175)||(46012738-46012853)
chr3 (46-175)||(10803716-10803846)
chr3 (70-175)||(8546265-8546370)
chr3 (46-175)||(11219134-11219263)
chr3 (46-143)||(27212823-27212920)
chr3 (54-175)||(27968919-27969040)
chr3 (56-169)||(28859597-28859710)
chr3 (60-175)||(3461320-3461435)
chr3 (46-185)||(15490031-15490169)
chr3 (55-142)||(20088405-20088492)
chr3 (89-186)||(6447245-6447342)
chr3 (90-175)||(20761960-20762045)
chr3 (55-187)||(27182656-27182786)
chr3 (63-155)||(6718723-6718815)
chr3 (46-186)||(20615344-20615482)
chr3 (51-175)||(46942488-46942612)
chr3 (46-185)||(8543465-8543603)
chr3 (46-185)||(31433733-31433872)
chr3 (46-175)||(18380020-18380149)
chr3 (46-175)||(29451090-29451219)
chr3 (60-175)||(6088238-6088353)
chr3 (60-175)||(21490044-21490159)
chr3 (56-175)||(47263275-47263394)
chr3 (56-133)||(10772106-10772183)
chr3 (60-155)||(50240756-50240851)
chr3 (60-134)||(23233214-23233288)
chr3 (56-174)||(45304340-45304458)
chr3 (68-117)||(27711236-27711285)
chr3 (51-175)||(26963259-26963383)
chr3 (150-187)||(23233182-23233219)
chr3 (56-105)||(35579605-35579654)
[»] scaffold0058 (1 HSPs)
scaffold0058 (46-188)||(74538-74680)
[»] chr8 (63 HSPs)
chr8 (46-175)||(17824626-17824755)
chr8 (46-175)||(17103875-17104004)
chr8 (46-188)||(18844541-18844683)
chr8 (46-175)||(8555314-8555443)
chr8 (46-186)||(3823131-3823271)
chr8 (58-190)||(27869248-27869380)
chr8 (60-175)||(10917839-10917954)
chr8 (46-176)||(37992097-37992227)
chr8 (46-175)||(24576034-24576163)
chr8 (46-175)||(33652565-33652694)
chr8 (46-175)||(4330976-4331105)
chr8 (46-175)||(17810296-17810425)
chr8 (46-175)||(18010070-18010199)
chr8 (46-175)||(19240865-19240994)
chr8 (46-175)||(19314049-19314178)
chr8 (46-175)||(27910774-27910903)
chr8 (46-175)||(27957193-27957322)
chr8 (89-185)||(8789881-8789977)
chr8 (56-175)||(11938753-11938871)
chr8 (56-175)||(19256220-19256339)
chr8 (60-175)||(19488071-19488186)
chr8 (60-175)||(32247921-32248036)
chr8 (58-175)||(22939323-22939440)
chr8 (46-175)||(24193206-24193335)
chr8 (46-175)||(43431569-43431698)
chr8 (46-185)||(6816383-6816522)
chr8 (60-175)||(13060941-13061056)
chr8 (56-175)||(30466964-30467083)
chr8 (56-175)||(30687944-30688063)
chr8 (46-175)||(21350476-21350605)
chr8 (60-164)||(26399028-26399132)
chr8 (46-175)||(29350921-29351051)
chr8 (46-175)||(16061949-16062078)
chr8 (56-160)||(5670194-5670298)
chr8 (56-172)||(24636660-24636776)
chr8 (63-175)||(25655868-25655980)
chr8 (46-186)||(32961657-32961797)
chr8 (60-187)||(23752284-23752411)
chr8 (46-175)||(9631401-9631531)
chr8 (46-175)||(4647765-4647894)
chr8 (46-175)||(9915051-9915179)
chr8 (51-175)||(29345074-29345198)
chr8 (56-175)||(25000441-25000560)
chr8 (60-175)||(25273338-25273452)
chr8 (46-169)||(40289437-40289559)
chr8 (60-145)||(19493695-19493781)
chr8 (46-175)||(6817052-6817181)
chr8 (78-175)||(8824855-8824952)
chr8 (54-175)||(15251608-15251728)
chr8 (67-175)||(21219250-21219358)
chr8 (46-145)||(5879202-5879301)
chr8 (46-185)||(31344172-31344311)
chr8 (60-175)||(31399518-31399633)
chr8 (96-189)||(17003310-17003403)
chr8 (105-175)||(25274654-25274724)
chr8 (60-169)||(33412992-33413095)
chr8 (89-176)||(2265388-2265474)
chr8 (89-175)||(6084256-6084340)
chr8 (60-155)||(41527730-41527825)
chr8 (99-175)||(42700667-42700743)
chr8 (46-142)||(3692214-3692310)
chr8 (89-137)||(15289683-15289731)
chr8 (89-137)||(15470052-15470100)
[»] chr6 (78 HSPs)
chr6 (46-186)||(22083838-22083978)
chr6 (276-381)||(3237241-3237347)
chr6 (46-185)||(12951708-12951847)
chr6 (46-185)||(18033526-18033664)
chr6 (46-187)||(11530225-11530366)
chr6 (46-191)||(28364911-28365056)
chr6 (60-175)||(11077663-11077778)
chr6 (46-175)||(9892963-9893092)
chr6 (46-186)||(22579348-22579488)
chr6 (46-185)||(2992615-2992754)
chr6 (60-176)||(14872133-14872249)
chr6 (46-187)||(6978279-6978418)
chr6 (46-175)||(6598464-6598593)
chr6 (46-175)||(15364468-15364597)
chr6 (46-175)||(24661019-24661148)
chr6 (46-175)||(25398002-25398131)
chr6 (46-175)||(26224428-26224557)
chr6 (46-175)||(495637-495766)
chr6 (46-175)||(12200694-12200823)
chr6 (46-167)||(12845003-12845124)
chr6 (46-175)||(14886561-14886690)
chr6 (75-185)||(14772690-14772800)
chr6 (46-175)||(1939252-1939381)
chr6 (58-175)||(11049761-11049878)
chr6 (46-175)||(27796844-27796973)
chr6 (68-175)||(5360431-5360538)
chr6 (46-185)||(18048788-18048927)
chr6 (46-161)||(23281786-23281901)
chr6 (46-175)||(21140939-21141068)
chr6 (58-170)||(33250723-33250835)
chr6 (60-175)||(5192199-5192314)
chr6 (60-175)||(6605506-6605621)
chr6 (56-175)||(9885253-9885372)
chr6 (56-175)||(15448395-15448514)
chr6 (46-175)||(2669309-2669438)
chr6 (46-167)||(12351604-12351725)
chr6 (46-175)||(20182145-20182274)
chr6 (46-175)||(21990185-21990313)
chr6 (46-175)||(22153717-22153846)
chr6 (58-175)||(26939599-26939716)
chr6 (54-175)||(30833970-30834091)
chr6 (60-176)||(1954895-1955010)
chr6 (60-188)||(6065451-6065579)
chr6 (60-175)||(12499230-12499345)
chr6 (60-175)||(12506559-12506674)
chr6 (60-175)||(12509556-12509671)
chr6 (46-145)||(27705422-27705521)
chr6 (46-176)||(22055621-22055751)
chr6 (78-175)||(28668132-28668229)
chr6 (60-145)||(33547560-33547645)
chr6 (46-185)||(21691495-21691635)
chr6 (60-176)||(11350196-11350309)
chr6 (54-175)||(9060099-9060219)
chr6 (58-175)||(12160857-12160973)
chr6 (46-175)||(16250812-16250941)
chr6 (46-175)||(18492369-18492498)
chr6 (60-144)||(13145016-13145100)
chr6 (76-175)||(15509186-15509285)
chr6 (60-175)||(20692821-20692936)
chr6 (89-175)||(12157386-12157472)
chr6 (46-155)||(343593-343702)
chr6 (46-175)||(12680195-12680323)
chr6 (78-175)||(17919568-17919665)
chr6 (68-175)||(12205195-12205302)
chr6 (60-175)||(15961417-15961532)
chr6 (89-175)||(10458807-10458893)
chr6 (46-134)||(14036620-14036708)
chr6 (46-134)||(19175828-19175915)
chr6 (46-186)||(11431638-11431779)
chr6 (56-187)||(16118156-16118287)
chr6 (101-184)||(28221647-28221730)
chr6 (102-175)||(5250195-5250268)
chr6 (68-176)||(10929505-10929614)
chr6 (46-155)||(5270392-5270502)
chr6 (89-134)||(3673184-3673229)
chr6 (92-155)||(2396249-2396313)
chr6 (233-277)||(3237168-3237212)
chr6 (103-175)||(9878525-9878596)
[»] scaffold0047 (1 HSPs)
scaffold0047 (46-185)||(58582-58721)
[»] chr2 (51 HSPs)
chr2 (46-185)||(30783334-30783473)
chr2 (46-175)||(41637614-41637743)
chr2 (51-186)||(27327617-27327752)
chr2 (46-185)||(31266350-31266489)
chr2 (46-175)||(29749413-29749542)
chr2 (46-186)||(28841341-28841481)
chr2 (46-175)||(32300447-32300576)
chr2 (51-175)||(28319589-28319713)
chr2 (46-175)||(22140374-22140503)
chr2 (46-185)||(18551253-18551392)
chr2 (56-175)||(37552233-37552352)
chr2 (46-175)||(1141532-1141661)
chr2 (46-175)||(15636745-15636874)
chr2 (46-179)||(18916407-18916539)
chr2 (46-175)||(37724002-37724131)
chr2 (56-175)||(12779606-12779725)
chr2 (52-175)||(13613103-13613226)
chr2 (60-175)||(43408521-43408636)
chr2 (60-175)||(44476385-44476500)
chr2 (46-188)||(13788052-13788194)
chr2 (46-175)||(32008948-32009078)
chr2 (46-175)||(8430292-8430421)
chr2 (46-175)||(20065084-20065213)
chr2 (46-175)||(23388388-23388517)
chr2 (46-174)||(26687701-26687830)
chr2 (46-175)||(41736168-41736297)
chr2 (60-175)||(7093578-7093693)
chr2 (58-188)||(36550844-36550973)
chr2 (58-175)||(14757131-14757248)
chr2 (46-175)||(21293721-21293850)
chr2 (46-175)||(32185828-32185957)
chr2 (51-175)||(44722933-44723057)
chr2 (56-175)||(23857968-23858086)
chr2 (46-125)||(27523007-27523086)
chr2 (70-168)||(35697475-35697573)
chr2 (46-176)||(44366006-44366136)
chr2 (90-175)||(27039918-27040003)
chr2 (46-175)||(28262360-28262489)
chr2 (60-175)||(26243331-26243446)
chr2 (68-175)||(38362281-38362388)
chr2 (46-185)||(37802379-37802517)
chr2 (56-173)||(8763640-8763757)
chr2 (53-186)||(18609517-18609650)
chr2 (56-159)||(40018808-40018911)
chr2 (56-159)||(13134646-13134749)
chr2 (89-186)||(2556134-2556231)
chr2 (46-111)||(29998633-29998698)
chr2 (62-155)||(31966555-31966647)
chr2 (46-186)||(36373896-36374034)
chr2 (46-134)||(9004359-9004447)
chr2 (103-175)||(22192232-22192304)
[»] chr5 (53 HSPs)
chr5 (46-175)||(33818571-33818700)
chr5 (60-186)||(25397787-25397913)
chr5 (46-186)||(23423755-23423895)
chr5 (46-186)||(618294-618434)
chr5 (46-175)||(16121849-16121978)
chr5 (46-157)||(33816786-33816897)
chr5 (46-185)||(27428012-27428151)
chr5 (51-186)||(35620343-35620477)
chr5 (46-175)||(17039641-17039770)
chr5 (51-175)||(2472724-2472848)
chr5 (60-175)||(746878-746993)
chr5 (46-175)||(8886861-8886990)
chr5 (46-175)||(23975635-23975764)
chr5 (46-186)||(25673228-25673367)
chr5 (46-175)||(8108870-8108999)
chr5 (46-175)||(12045727-12045856)
chr5 (46-175)||(12328236-12328365)
chr5 (46-175)||(36196394-36196523)
chr5 (60-175)||(16631884-16631999)
chr5 (56-171)||(26708599-26708714)
chr5 (56-171)||(26978333-26978448)
chr5 (60-175)||(38837681-38837796)
chr5 (70-176)||(33734982-33735088)
chr5 (46-175)||(7888797-7888926)
chr5 (54-175)||(13620137-13620258)
chr5 (46-175)||(15060973-15061102)
chr5 (46-175)||(36831900-36832029)
chr5 (60-175)||(10494751-10494866)
chr5 (56-187)||(24138839-24138970)
chr5 (60-175)||(36597350-36597465)
chr5 (51-185)||(25652583-25652717)
chr5 (46-175)||(17986729-17986858)
chr5 (46-175)||(20959508-20959637)
chr5 (51-175)||(28265485-28265609)
chr5 (46-185)||(11927786-11927925)
chr5 (60-175)||(17771978-17772093)
chr5 (60-175)||(40484058-40484173)
chr5 (46-175)||(7003740-7003867)
chr5 (46-188)||(10420249-10420391)
chr5 (46-175)||(23408980-23409110)
chr5 (56-181)||(3080700-3080825)
chr5 (51-175)||(5982650-5982775)
chr5 (51-188)||(17036409-17036546)
chr5 (60-175)||(4125198-4125313)
chr5 (56-185)||(20187941-20188070)
chr5 (54-179)||(32726732-32726857)
chr5 (46-145)||(17079405-17079504)
chr5 (60-175)||(35778155-35778270)
chr5 (46-175)||(13974088-13974217)
chr5 (70-142)||(31853131-31853203)
chr5 (89-175)||(16472191-16472277)
chr5 (99-155)||(9024267-9024323)
chr5 (46-113)||(18413556-18413623)
[»] chr1 (75 HSPs)
chr1 (56-175)||(50845340-50845459)
chr1 (46-175)||(14760867-14760996)
chr1 (46-185)||(13102316-13102455)
chr1 (46-175)||(12720809-12720938)
chr1 (46-185)||(7830031-7830170)
chr1 (46-175)||(6459217-6459346)
chr1 (46-175)||(9109985-9110114)
chr1 (46-175)||(45839292-45839421)
chr1 (46-188)||(18894897-18895039)
chr1 (46-175)||(6412063-6412192)
chr1 (46-175)||(41752433-41752562)
chr1 (60-175)||(46790014-46790129)
chr1 (56-186)||(4340417-4340547)
chr1 (46-176)||(16913586-16913716)
chr1 (46-160)||(41071860-41071974)
chr1 (46-175)||(9464103-9464232)
chr1 (46-175)||(15243085-15243214)
chr1 (46-175)||(20408170-20408299)
chr1 (46-175)||(22603548-22603677)
chr1 (46-175)||(29549418-29549547)
chr1 (46-175)||(38531180-38531309)
chr1 (46-175)||(52183678-52183807)
chr1 (51-175)||(46339455-46339579)
chr1 (60-191)||(13308814-13308945)
chr1 (60-175)||(19865258-19865373)
chr1 (46-169)||(22789607-22789730)
chr1 (60-175)||(28229465-28229580)
chr1 (56-175)||(41120747-41120866)
chr1 (46-175)||(22158802-22158931)
chr1 (46-175)||(48522518-48522647)
chr1 (51-175)||(51973429-51973553)
chr1 (46-185)||(17661050-17661189)
chr1 (46-185)||(19081728-19081867)
chr1 (46-185)||(19129616-19129755)
chr1 (56-175)||(46785968-46786087)
chr1 (46-175)||(9985337-9985466)
chr1 (46-175)||(12161814-12161943)
chr1 (46-175)||(17200020-17200149)
chr1 (46-175)||(18890559-18890688)
chr1 (46-175)||(23457897-23458026)
chr1 (51-143)||(12174808-12174900)
chr1 (55-175)||(50092308-50092428)
chr1 (46-185)||(12989852-12989991)
chr1 (46-188)||(7181552-7181694)
chr1 (46-144)||(13523002-13523100)
chr1 (77-175)||(25788007-25788105)
chr1 (46-175)||(41063197-41063326)
chr1 (56-175)||(9177110-9177229)
chr1 (59-186)||(11917799-11917925)
chr1 (46-176)||(30928387-30928517)
chr1 (60-145)||(41359001-41359087)
chr1 (46-175)||(9259193-9259322)
chr1 (46-123)||(12370003-12370080)
chr1 (56-185)||(39748943-39749072)
chr1 (46-175)||(46865243-46865372)
chr1 (70-185)||(12806836-12806952)
chr1 (60-175)||(8941004-8941119)
chr1 (46-176)||(17733962-17734093)
chr1 (89-175)||(27253865-27253951)
chr1 (46-155)||(32046876-32046985)
chr1 (96-175)||(18787923-18788001)
chr1 (52-175)||(26825246-26825369)
chr1 (46-176)||(16258495-16258625)
chr1 (51-171)||(13195588-13195708)
chr1 (46-175)||(20290331-20290459)
chr1 (60-185)||(49881058-49881182)
chr1 (55-175)||(6775896-6776015)
chr1 (46-185)||(20580909-20581049)
chr1 (61-176)||(45918913-45919028)
chr1 (46-119)||(14486698-14486771)
chr1 (55-110)||(25687355-25687410)
chr1 (46-144)||(52621154-52621252)
chr1 (60-155)||(9882070-9882162)
chr1 (46-143)||(29093596-29093693)
chr1 (56-137)||(30673504-30673585)
[»] scaffold0069 (1 HSPs)
scaffold0069 (46-176)||(10158-10288)
[»] scaffold0717 (1 HSPs)
scaffold0717 (46-175)||(928-1058)
[»] scaffold0599 (1 HSPs)
scaffold0599 (46-175)||(7505-7634)
[»] scaffold0219 (1 HSPs)
scaffold0219 (46-175)||(19603-19732)
[»] scaffold0576 (1 HSPs)
scaffold0576 (46-175)||(9239-9368)
[»] scaffold0108 (1 HSPs)
scaffold0108 (46-175)||(12653-12781)
[»] scaffold0076 (1 HSPs)
scaffold0076 (46-175)||(26483-26612)
[»] scaffold0001 (3 HSPs)
scaffold0001 (46-175)||(8120-8249)
scaffold0001 (46-175)||(21852-21981)
scaffold0001 (46-175)||(84303-84432)
[»] scaffold0007 (3 HSPs)
scaffold0007 (51-175)||(3747-3871)
scaffold0007 (46-175)||(202774-202903)
scaffold0007 (46-112)||(276207-276273)
[»] scaffold0502 (1 HSPs)
scaffold0502 (46-185)||(10892-11031)
[»] scaffold0603 (1 HSPs)
scaffold0603 (46-175)||(5989-6118)
[»] scaffold0087 (1 HSPs)
scaffold0087 (46-175)||(37797-37926)
[»] scaffold0240 (1 HSPs)
scaffold0240 (56-175)||(15000-15119)
[»] scaffold0128 (1 HSPs)
scaffold0128 (56-175)||(10673-10792)
[»] scaffold0014 (1 HSPs)
scaffold0014 (56-175)||(22221-22340)
[»] scaffold0009 (3 HSPs)
scaffold0009 (58-175)||(219648-219765)
scaffold0009 (78-175)||(182562-182659)
scaffold0009 (106-185)||(215663-215742)
[»] scaffold0006 (2 HSPs)
scaffold0006 (60-175)||(84684-84799)
scaffold0006 (51-185)||(120987-121121)
[»] scaffold0019 (1 HSPs)
scaffold0019 (58-185)||(173456-173584)
[»] scaffold0655 (1 HSPs)
scaffold0655 (51-175)||(3172-3294)
[»] scaffold0062 (1 HSPs)
scaffold0062 (46-175)||(43917-44046)
[»] scaffold0161 (1 HSPs)
scaffold0161 (52-175)||(6801-6924)
[»] scaffold0035 (1 HSPs)
scaffold0035 (58-171)||(74731-74845)
[»] scaffold0023 (1 HSPs)
scaffold0023 (46-175)||(39713-39842)
[»] scaffold0184 (1 HSPs)
scaffold0184 (51-175)||(7461-7585)
[»] scaffold0284 (1 HSPs)
scaffold0284 (60-155)||(1549-1644)
[»] scaffold0011 (1 HSPs)
scaffold0011 (97-175)||(17627-17705)
[»] scaffold0038 (1 HSPs)
scaffold0038 (101-184)||(22145-22228)
[»] scaffold0002 (1 HSPs)
scaffold0002 (60-175)||(439977-440092)
[»] scaffold0114 (1 HSPs)
scaffold0114 (60-155)||(36316-36411)
[»] scaffold0211 (1 HSPs)
scaffold0211 (60-145)||(19178-19263)


Alignment Details
Target: chr7 (Bit Score: 105; Significance: 2e-52; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 39979763 - 39979623
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||    
T  39979763 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgaggaattttatgttttccg 39979664  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtgt 186  Q
     |||||||||||||||||||||||||||||| |||||||||    
T  39979663 tcacaaatttccctccctaattttgcttttcctaatagtgt 39979623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 46 - 187
Target Start/End: Complemental strand, 40847574 - 40847433
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  40847574 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgacgaattttatgttttccg 40847475  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtgta 187  Q
     ||||||||||||||||||||||| |||||| || |||||||    
T  40847474 tcacaaatttccctccctaattttacttttcctagtagtgta 40847433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 46 - 168
Target Start/End: Original strand, 36636506 - 36636628
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||| ||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  36636506 ttagtgaggcaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccg 36636605  T
Q  146 acacaaatttccctccctaattt 168  Q
     ||||||||||||||||||||||    
T  36636606 tcacaaatttccctccctaattt 36636628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 23232039 - 23232168
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| || |||||||    
T  23232039 ttagtgagggatatttagtgagggaaaacatgaaatccctttctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccg 23232138  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  23232139 tcactaatttccctctctaattttgctttt 23232168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 4514779 - 4514905
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| |||||| ||||||||||| | ||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||    
T  4514779 ttagtgagggaaaatatgaaatccctctctaattccttcactaaattttgcgaccaaagaatttgtgagaaattttatgttttccgtcacaaatttccct 4514878  T
Q  160 ccctaattttgcttttcttaatagtgt 186  Q
    ||||||||||||||||| || ||||||    
T  4514879 ccctaattttgcttttcctagtagtgt 4514905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 1824325 - 1824199
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| |||||| ||||||| ||| | ||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||| |||||||||||||    
T  1824325 ttagtgagggaaaatatgaaattcctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttatgttttccgtcacaaatttccct 1824226  T
Q  160 ccctaattttgcttttcttaatagtgt 186  Q
    ||||||||||||||||| || ||||||    
T  1824225 ccctaattttgcttttcctagtagtgt 1824199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 22486394 - 22486523
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| ||||||| |||||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  22486394 ttagtgagggaaatttagtgacggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 22486493  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  22486494 tcactaatttccctcgctaattttgctttt 22486523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 60 - 176
Target Start/End: Original strand, 26577279 - 26577395
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| |||||||||||||||||| | |||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||| |||||||    
T  26577279 ttagtgagggaaaacatgaaatccctctctaataccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaagtttccct 26577378  T
Q  160 ccctaattttgcttttc 176  Q
     ||||||||||||||||    
T  26577379 tcctaattttgcttttc 26577395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 46 - 185
Target Start/End: Complemental strand, 31425650 - 31425511
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| ||||||| | |||||||| | ||||||||||||||||||||||||||| ||||||| |||||||||| || |||||||    
T  31425650 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccacagaatttgtgaggaatttcattttttccg 31425551  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtg 185  Q
     ||| |||||||||| ||||||||||||||  ||||||||    
T  31425550 tcactaatttccctcgctaattttgctttttctaatagtg 31425511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 46 - 169
Target Start/End: Complemental strand, 47523789 - 47523666
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||| || |||||||    
T  47523789 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccg 47523690  T
Q  146 acacaaatttccctccctaatttt 169  Q
     ||| |||||||||| ||||||||    
T  47523689 tcactaatttccctcgctaatttt 47523666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 46 - 188
Target Start/End: Complemental strand, 15014544 - 15014402
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||||||| |||||||||||||||||| | ||||||||||||||||||||||||| || |||||| ||||||||||||| |||||||    
T  15014544 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaattttattttttccg 15014445  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtgtaa 188  Q
     ||| |||||||||| |||||||| |||||  || ||||||||    
T  15014444 tcaccaatttccctcgctaattttactttttctagtagtgtaa 15014402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 46 - 185
Target Start/End: Original strand, 1907355 - 1907494
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||| |||| |||||| |||||||||||||||||| | ||||| ||||||||||||||||||||||||||| | ||||| ||||||| |||||||    
T  1907355 ttagtgaggaaaatctagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatatgtgagggattttattttttccg 1907454  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtg 185  Q
     ||| |||||||||| ||||||||||||||| || |||||    
T  1907455 tcactaatttccctcgctaattttgcttttcctagtagtg 1907494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 54 - 185
Target Start/End: Original strand, 36993828 - 36993959
Alignment:
Q  54 ggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaat 153  Q
    ||||||||||||| | ||||||||||||| |||| |||||||||||||||||||| |||| ||  ||||| ||||||||||||| ||||||  |||||||    
T  36993828 ggaaatttagtgaggaaaaacatgaaatctctttctaattccgtcactaaattttacgactaagaaatttgtgaggaattttatattttccatcacaaat 36993927  T
Q  154 ttccctccctaattttgcttttcttaatagtg 185  Q
    ||||||||||||||||||||||| || |||||    
T  36993928 ttccctccctaattttgcttttcctagtagtg 36993959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 46 - 176
Target Start/End: Original strand, 24140450 - 24140580
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| ||||||||| |||||| | |  |||||||||| |||||||| |||||||||||||| ||||||||||||| |||||||    
T  24140450 ttagtgagggaaatttagtgagggaaaacataaaatccttctccaattccgtcattaaattttacgaccaaagaatttgtgaggaattttatattttccg 24140549  T
Q  146 acacaaatttccctccctaattttgcttttc 176  Q
     ||||||||| ||||||||||||| ||||||    
T  24140550 tcacaaattttcctccctaattttacttttc 24140580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 21917473 - 21917344
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||||||| ||||||| | |||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  21917473 ttagtgagggacatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 21917374  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  21917373 tcactaatttccctcactaattttgctttt 21917344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 27806018 - 27806147
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||||||| |||||||||||||||||| | |||||||||||||||||||| ||||||| |||||| |||||||||| || |||||||    
T  27806018 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccg 27806117  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| ||||| |||| ||||||||||||||    
T  27806118 tcactaattttcctcgctaattttgctttt 27806147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 28800878 - 28801007
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||||| || ||||| |    
T  28800878 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttctg 28800977  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  28800978 tcactaatttccctcgctaattttgctttt 28801007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 46 - 176
Target Start/End: Original strand, 20174020 - 20174150
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||||||||||   ||||| |||||||||| || |||||||    
T  20174020 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccg 20174119  T
Q  146 acacaaatttccctccctaattttgcttttc 176  Q
     ||| |||||||||| |||||||||||||||    
T  20174120 tcactaatttccctcgctaattttgcttttc 20174150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 7733451 - 7733322
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||||||| | |||||||||||||||| | |||||||||| ||||||||||||||||| |||||| |||||||||| || |||||||    
T  7733451 ttagtgagggatatttagtgaggtaaaacatgaaatccctctctaattccgtctctaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 7733352  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||| ||||||    
T  7733351 tcactaatttccctcgctaatttcgctttt 7733322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 18217829 - 18217958
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| | ||||| | |||||||| | ||||| |||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  18217829 ttagtgagggaaatttagtgaggaaaaacgtaaaatccctctctaatttcgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 18217928  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  18217929 tcactaatttccctcgctaattttgctttt 18217958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 23577328 - 23577199
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| ||||||| |||||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  23577328 ttagtgagggaaatttagtgagggaaaacgtgaaatccctatctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 23577229  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||| ||| || ||||| |||||    
T  23577228 tcactaatttctctcgctgatttttctttt 23577199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 24605838 - 24605967
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||| ||||||||||| ||||||| ||||||| || | ||||||||||||||||||||||||||||||||||| |||||||||| || |||||||    
T  24605838 ttagtgaggaaaatttagtgagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccg 24605937  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| || ||||| |||||    
T  24605938 tcactaatttccctcgctgatttttctttt 24605967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 37135424 - 37135295
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||| ||||||  ||||||||||||||||| || |||||||    
T  37135424 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgaccatggaatttatgaggaatttcattttttccg 37135325  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||| ||||    
T  37135324 tcactaatttccctcactaattttgttttt 37135295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 51 - 175
Target Start/End: Original strand, 1842899 - 1843023
Alignment:
Q  51 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 150  Q
    |||||||||||||||| ||||||| | ||||||||   |||||||||||||||||||||||||||| |||||| |||||||||| || ||||||| |||     
T  1842899 gagggaaatttagtgagggaaaacgtaaaatccctccctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcact 1842998  T
Q  151 aatttccctccctaattttgctttt 175  Q
    ||||||||||  |||||||||||||    
T  1842999 aatttccctcgttaattttgctttt 1843023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 46 - 176
Target Start/End: Original strand, 2457670 - 2457798
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||| |||||| |||| |||||||||||||||||| |  |||||||||||||||||||||||| ||||||||| ||||  ||||||| ||||| |    
T  2457670 ttagtgaggaaaattttgtgagggaaaacatgaaatccctctcaaattccgtcactaaattttgcgacaaaagaatttgtgag--attttatattttctg 2457767  T
Q  146 acacaaatttccctccctaattttgcttttc 176  Q
     ||| ||||||||||||||||||||||||||    
T  2457768 tcactaatttccctccctaattttgcttttc 2457798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 816330 - 816201
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||| |||||||| || ||||||| |||||||||| | ||||||||||||||||||||||||||||||||||| ||||  ||||| | |||||||    
T  816330 ttagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagagattttgttttttccg 816231  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| ||||||||||||||| |||| ||||    
T  816230 tcactaatttccctccctaaatttgttttt 816201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 11036507 - 11036636
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||||||||||   ||||| |||||||||| || |||||||    
T  11036507 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccg 11036606  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||  ||||||||||||||    
T  11036607 tcactaatttcccttgctaattttgctttt 11036636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 48933136 - 48933276
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| ||||   ||||| |||||| ||| | |||||||||||||||||||||||||||  |||||| ||||||||||||| |||||||    
T  48933136 ttagtgagggaaattttgtgagaaaaaacgtgaaattcctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaattttattttttccg 48933235  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtgt 186  Q
     ||| ||||| |||| ||||||||||||||  |||||||||    
T  48933236 tcactaattttcctcgctaattttgctttttctaatagtgt 48933276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 6849350 - 6849221
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| | ||||| | ||||| || | ||||||||||||||||||||||||| || |||||| |||||||||| || || ||||    
T  6849350 ttagcgagggaaatttagtgaggtaaaacgtaaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttctccg 6849251  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  6849250 tcactaatttccctcgctaattttgctttt 6849221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 23750875 - 23750746
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| ||||||  | |||||||| | |||||||||||||||||||| ||||||| |||||| |||| ||||| || |||||||    
T  23750875 ttagtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttacgaccaaggaatttgtgagaaatttcattttttccg 23750776  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||| ||||    
T  23750775 tcactaatttccctcgctaattttgttttt 23750746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 11852021 - 11852137
Alignment:
Q  59 tttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccc 158  Q
    ||||| || ||||||| |||||||| | | ||||||||||||||||||||| ||||||||||||| ||||  ||||||| ||||| | |||||||||| |    
T  11852021 tttagagagggaaaacctgaaatccttctctaattccgtcactaaattttgtgaccaaagaatttgtgagacattttattttttctgtcacaaatttctc 11852120  T
Q  159 tccctaattttgctttt 175  Q
    |||||||||||||||||    
T  11852121 tccctaattttgctttt 11852137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 52 - 188
Target Start/End: Complemental strand, 14786768 - 14786632
Alignment:
Q  52 agggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaa 151  Q
    |||||||||||  || ||||||| | |||| ||||| ||||||||||||||||||||||||||||| ||||| |||||||||| || ||||| | ||| |    
T  14786768 agggaaatttaacgagggaaaacgtaaaattcctttttaattccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttctgtcacta 14786669  T
Q  152 atttccctccctaattttgcttttcttaatagtgtaa 188  Q
    |||| |||| ||||||||| ||||  |||||||||||    
T  14786668 attttcctcactaattttgttttttctaatagtgtaa 14786632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 51 - 175
Target Start/End: Original strand, 38057637 - 38057761
Alignment:
Q  51 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 150  Q
    ||||||||||||| || ||||||| |||||||||| | |||||||||||||||| ||||||||||| |||||| ||||||||||||| ||||||  |||     
T  38057637 gagggaaatttagcgagggaaaacgtgaaatccctctttaattccgtcactaaactttgcgaccaaggaatttgtgaggaattttattttttccatcact 38057736  T
Q  151 aatttccctccctaattttgctttt 175  Q
    ||||| ||||  | |||||||||||    
T  38057737 aattttcctcgttgattttgctttt 38057761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 3872312 - 3872197
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||| | ||||| || | ||||||||||||||||||||| |||||| |||||| |||||||||| || ||||||| ||| |||||||||    
T  3872312 ttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgagaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 3872213  T
Q  160 ccctaattttgctttt 175  Q
    | ||||||||||||||    
T  3872212 cgctaattttgctttt 3872197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 3904603 - 3904488
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||| | |||||||| | ||||||||||||||||||||||||||||  |||||  ||||||||| || ||||||| ||| |||||||||    
T  3904603 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgcgaggaatttcattttttccgtcactaatttccct 3904504  T
Q  160 ccctaattttgctttt 175  Q
    | ||||||||||||||    
T  3904503 cgctaattttgctttt 3904488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 9698677 - 9698548
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| ||||||| | |||| ||| | ||||||||||||||||||||  |||||| |||||| ||| |||||| ||  ||||||    
T  9698677 ttagtgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttatgaccaaggaatttgtgatgaatttcattatttccg 9698578  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  9698577 tcactaatttccctcgctaattttgctttt 9698548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 46 - 155
Target Start/End: Complemental strand, 10050975 - 10050866
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| ||||||| | |||||||| | |||||||||||||||||||||||||||| |||||| |||| ||||| || |||||||    
T  10050975 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccg 10050876  T
Q  146 acacaaattt 155  Q
     ||| |||||    
T  10050875 tcactaattt 10050866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 20429465 - 20429594
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||| ||||||   ||||| |||||||||| || |||||||    
T  20429465 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgaccatgaaatttgtgaggaatttcattttttccg 20429564  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||   |||||||||||||    
T  20429565 tcactaatttcccttgttaattttgctttt 20429594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 56 - 175
Target Start/End: Original strand, 21623031 - 21623149
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||||||| ||||||| | |||||||| | ||||||| ||||||||||||||| |||| |||||| |||||||||| || ||||||| ||| |||||    
T  21623031 aaatttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgcccaaggaatttgtgaggaatttcattttttccgtcactaattt 21623130  T
Q  156 ccctccctaattttgctttt 175  Q
    ||||| || |||||||||||    
T  21623131 ccctcgct-attttgctttt 21623149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 60 - 175
Target Start/End: Original strand, 33427704 - 33427818
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| |||||||||||||| ||| | |||||||||||||||||||| |||||||||||||| |||||||||| || ||||  | ||| |||||||||    
T  33427704 ttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcat-tttttggtcactaatttccct 33427802  T
Q  160 ccctaattttgctttt 175  Q
    | ||||||||| ||||    
T  33427803 cgctaattttgttttt 33427818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 54 - 175
Target Start/End: Complemental strand, 20924089 - 20923968
Alignment:
Q  54 ggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaat 153  Q
    ||||||||||||| |||||||||||||||||| | |||||| |||||||||||||| ||||||  ||||| | ||  ||||||| ||||||  ||| |||    
T  20924089 ggaaatttagtgagggaaaacatgaaatccctctctaattctgtcactaaattttgtgaccaacaaatttgtaagagattttattttttccatcactaat 20923990  T
Q  154 ttccctccctaattttgctttt 175  Q
    |||||||| ||||||| |||||    
T  20923989 ttccctccataattttactttt 20923968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 46 - 171
Target Start/End: Original strand, 22501594 - 22501719
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||||| || ||||||| |||||||||| | ||||||||||| ||||||||||| ||||||||||| |||   ||||||| |||||||    
T  22501594 ttagtgagggaaatttagagagggaaaacgtgaaatccctctctaattccgtcattaaattttgcggccaaagaatttgtgaaagattttattttttccg 22501693  T
Q  146 acacaaatttccctccctaattttgc 171  Q
     ||| ||||| | ||| |||||||||    
T  22501694 tcactaattttcatccttaattttgc 22501719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 62 - 175
Target Start/End: Original strand, 23539248 - 23539361
Alignment:
Q  62 agtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctcc 161  Q
    ||||| |||| || |||||||||| | ||||||||||| ||||||||||||| |  |||||| |||||||||| || ||||||| ||| ||||||||||     
T  23539248 agtgagggaatacgtgaaatccctctctaattccgtcattaaattttgcgactatggaatttgtgaggaatttcattttttccgtcactaatttccctcg 23539347  T
Q  162 ctaattttgctttt 175  Q
    ||||||||||||||    
T  23539348 ctaattttgctttt 23539361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 23699964 - 23699835
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||| ||||||| |||| ||||||  |||||||||| | |||||| ||||||||||||||||||||   ||||| |||||||||| || |||||||    
T  23699964 ttagtgagagaaattttgtgagggaaaatgtgaaatccctctttaattctgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccg 23699865  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| |||||||| |||||    
T  23699864 tcactaatttccctcgctaatttttctttt 23699835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 52 - 176
Target Start/End: Original strand, 27304878 - 27305000
Alignment:
Q  52 agggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaa 151  Q
    |||||||||| |||||||||| | ||| |||||| | ||||||||||||||||||||||| |||| |||||| || || ||||||| ||||| | ||| |    
T  27304878 agggaaattt-gtgaaggaaa-cgtgacatccctctctaattccgtcactaaattttgcggccaaggaatttgtgggggattttattttttctgtcacta 27304975  T
Q  152 atttccctccctaattttgcttttc 176  Q
    ||||||||||||||||||| |||||    
T  27304976 atttccctccctaattttgtttttc 27305000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 46 - 169
Target Start/End: Complemental strand, 42926559 - 42926435
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaatttta-tgttttcc 144  Q
    |||| |||||| ||||||||| | |||||||||||||||| | ||||||||||||||||||||||||| ||  ||||| |||||||||| | | ||||||    
T  42926559 ttagtgagggatatttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgactaagaaatttgtgaggaatttcatttttttcc 42926460  T
Q  145 gacacaaatttccctccctaatttt 169  Q
    | ||| ||||| |||| ||||||||    
T  42926459 gtcactaattttcctcgctaatttt 42926435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 46 - 169
Target Start/End: Original strand, 31042251 - 31042374
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||| ||||| || ||||||| |||||||||| | |||||| ||||||||||||||||||||| |||||| |||| |||||||| ||||||     
T  31042251 ttagtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgagaaattttattttttcca 31042350  T
Q  146 acacaaatttccctccctaatttt 169  Q
      || ||||| |||| ||||||||    
T  31042351 taactaattttcctctctaatttt 31042374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 58 - 175
Target Start/End: Original strand, 15969796 - 15969914
Alignment:
Q  58 atttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaatttta-tgttttccgacacaaatttc 156  Q
    ||||||||| |||||||||||||| ||| | |||||||||||||||||||| |||||||||||||| |||| ||||| | | ||||||| ||| ||| ||    
T  15969796 atttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaagaatttgtgagaaatttcatttttttccgtcactaatatc 15969895  T
Q  157 cctccctaattttgctttt 175  Q
    ||||  ||||||| |||||    
T  15969896 cctcattaattttactttt 15969914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 46 - 155
Target Start/End: Complemental strand, 11890286 - 11890177
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||| ||||||||||| |||||| |||| ||||||   ||| | ||||||||||||||| ||||||||||||||||||| ||||||| |||||||    
T  11890286 ttagtgaggaaaatttagtgagggaaaatatgatatccctcgctaacttcgtcactaaattttgagaccaaagaatttatgagggattttattttttccg 11890187  T
Q  146 acacaaattt 155  Q
     ||| |||||    
T  11890186 tcactaattt 11890177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 46 - 143
Target Start/End: Original strand, 45664768 - 45664865
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttc 143  Q
    |||| ||||||||| |||||| ||||||| | |||||||| | |||||||||||||||||||||||| ||| |||||| |||||||||| || |||||    
T  45664768 ttagtgagggaaatatagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttc 45664865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 51 - 171
Target Start/End: Original strand, 32267352 - 32267471
Alignment:
Q  51 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 150  Q
    ||||||||||||| || |||||||   |||||||| | |||||| ||||||||||||||||| |||  ||||| ||||| ||||||| ||||||| |||     
T  32267352 gagggaaatttagagagggaaaacgcaaaatccctctctaattctgtcactaaattttgcgatcaagaaatttgtgagggattttat-ttttccgtcact 32267450  T
Q  151 aatttccctccctaattttgc 171  Q
    ||| |||||||||||||||||    
T  32267451 aatctccctccctaattttgc 32267471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 2650945 - 2650838
Alignment:
Q  68 ggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaatt 167  Q
    ||||||| | |||||||| | |||||||||||||||||||||||||||   ||||| |||||||||| || ||||||| ||| || ||||||| ||||||    
T  2650945 ggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaaattccctcactaatt 2650846  T
Q  168 ttgctttt 175  Q
    || |||||    
T  2650845 tttctttt 2650838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 175
Target Start/End: Original strand, 21871611 - 21871697
Alignment:
Q  89 taattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 175  Q
    ||||||||||||||||||||||||||||  ||||| |||||||||| || ||||||| |||  |||| |||| ||||||||| ||||    
T  21871611 taattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgccactgattttcctcgctaattttgttttt 21871697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 26415424 - 26415553
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||| ||||| || | ||||| | |||||||| | ||||| |||||||||||||| ||| |||| ||||| |||| |||||||| ||||||     
T  26415424 ttagtgagggaattttagagaggaaaaacgtaaaatccctctttaatttcgtcactaaattttacgatcaaaaaatttgtgagaaattttattttttcca 26415523  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| ||||||| || |||||||| |||||    
T  26415524 tcactaatttccttctctaattttactttt 26415553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 185
Target Start/End: Complemental strand, 1822118 - 1821996
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| | ||||||||||||| || | ||||||| ||| ||||||||  || | | |||||| ||||||||||||| ||||||| ||| ||||   ||    
T  1822118 ttagtgaggaaaaacatgaaatctctctctaattccttcagtaaattttaagatcgaggaatttgtgaggaattttatattttccgtcactaatt---ct 1822022  T
Q  160 ccctaattttgcttttcttaatagtg 185  Q
    ||||||||||||||||| || |||||    
T  1822021 ccctaattttgcttttcatagtagtg 1821996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 2093487 - 2093372
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||| | ||||| || | |||||||||||||||||||| ||| ||||   ||| |||||||||| || ||||||| ||| |||||||||    
T  2093487 ttagtgagggaaaacgtcaaatctctctctaattccgtcactaaatttttcgatcaaattttttttgaggaatttcattttttccgtcactaatttccct 2093388  T
Q  160 ccctaattttgctttt 175  Q
    | || ||||| |||||    
T  2093387 cgctgatttttctttt 2093372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 167
Target Start/End: Complemental strand, 10222758 - 10222648
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    |||||||| ||| |||||| | |||||||| | |||||| |||| |||||||||||| |||| |||||||||| |||||||  ||||| | ||| |||||    
T  10222758 aaatttagagaaagaaaacgtaaaatccctctctaattctgtcattaaattttgcgatcaaa-aatttatgagaaattttactttttctgtcactaattt 10222660  T
Q  156 ccctccctaatt 167  Q
     |||||||||||    
T  10222659 tcctccctaatt 10222648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 38090336 - 38090402
Alignment:
Q  119 aatttatgaggaattttatgttttccgacacaaatttccctccctaattttgcttttcttaatagtg 185  Q
    ||||| ||||| ||||||| ||||||| |||||||||||||||||||||||||| ||| || |||||    
T  38090336 aatttgtgagggattttattttttccgtcacaaatttccctccctaattttgctattcctagtagtg 38090402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 175
Target Start/End: Original strand, 27130339 - 27130461
Alignment:
Q  51 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 150  Q
    ||||||||||||| || ||||||  |||||||||| ||  ||||||||||||| ||||||||  || |||||| ||||| ||||||| ||||||  |||     
T  27130339 gagggaaatttagagagggaaaatgtgaaatccctcta--attccgtcactaacttttgcgattaacgaatttgtgaggcattttatattttccatcact 27130436  T
Q  151 aatttccctccctaattttgctttt 175  Q
     ||||| ||| | ||||||||||||    
T  27130437 gatttctctctcgaattttgctttt 27130461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 169
Target Start/End: Complemental strand, 25777246 - 25777128
Alignment:
Q  51 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 150  Q
    ||||||||||||| || ||||||| ||||||| || | ||||| | |||||||||||| ||| |||| ||||| ||||| ||||||| || |  | |||     
T  25777246 gagggaaatttagagagggaaaacgtgaaatcactctctaatttcatcactaaattttacgatcaaaaaatttgtgagggattttattttattggtcact 25777147  T
Q  151 aatttccctccctaatttt 169  Q
    ||||| | |||||||||||    
T  25777146 aattttcttccctaatttt 25777128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 78 - 176
Target Start/End: Complemental strand, 1841889 - 1841792
Alignment:
Q  78 aaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgcttttc 176  Q
    |||||||| | ||||||| ||| |||||||||| | ||| |||||| ||||| ||||||| |||||  | || |||||| || ||||||||||||||||    
T  1841889 aaatccctctctaattccttcagtaaattttgcaatcaaggaatttgtgagggattttattttttctta-actaatttctcttcctaattttgcttttc 1841792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 175
Target Start/End: Complemental strand, 27132817 - 27132731
Alignment:
Q  89 taattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 175  Q
    |||||| ||||||||||||||| || ||  ||||| ||| | ||||||| |||||||  || |||||||||| |||||||| |||||    
T  27132817 taattctgtcactaaattttgcaacaaacaaatttgtgatggattttattttttccgttaccaatttccctctctaattttactttt 27132731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 105; Significance: 2e-52; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 46 - 190
Target Start/End: Original strand, 33914057 - 33914201
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| | |||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33914057 ttagtgagggaaatttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttatgaggaattttatgttttccg 33914156  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtgtaata 190  Q
     |||||||||||||||||||||||||||||| || ||||| ||||    
T  33914157 tcacaaatttccctccctaattttgcttttcctagtagtgaaata 33914201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 46 - 179
Target Start/End: Original strand, 25147719 - 25147852
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25147719 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaattttatgttttccg 25147818  T
Q  146 acacaaatttccctccctaattttgcttttctta 179  Q
     || ||||||||||| ||||||||||||||||||    
T  25147819 tcataaatttccctctctaattttgcttttctta 25147852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 46 - 185
Target Start/End: Original strand, 5399607 - 5399746
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||    
T  5399607 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaaccaaggaatttgtgaggaattttatgttttccg 5399706  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtg 185  Q
     ||||||||| ||||||||| |||||||||| || |||||    
T  5399707 tcacaaattttcctccctaagtttgcttttcctagtagtg 5399746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 63 - 185
Target Start/End: Complemental strand, 9059074 - 9058952
Alignment:
Q  63 gtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccc 162  Q
    |||| |||||||||||||||||| | ||||||||||| |||||||||||||||| |||||| |||| |||||||||||||| | ||||||||||||||||    
T  9059074 gtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgagaaattttatgttttcagtcacaaatttccctccc 9058975  T
Q  163 taattttgcttttcttaatagtg 185  Q
    |||||||||||||| || |||||    
T  9058974 taattttgcttttcctagtagtg 9058952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 22168266 - 22168395
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||||||| |||||||||||||| ||| | |||||||| ||||||||||||||||||| ||||||||||||||||| || |||||||    
T  22168266 ttagtgagggatatttagtgagggaaaacatgaaattcctctctaattccggcactaaattttgcgaccaaggaatttatgaggaatttcattttttccg 22168365  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  22168366 tcactaatttccctcgctaattttgctttt 22168395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 46 - 185
Target Start/End: Original strand, 1638445 - 1638584
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||| ||||||||||| |||||||||||||| |||   ||||||||||||||||||||||||||||||||| | ||||| ||||||| |||||||    
T  1638445 ttagtgaggaaaatttagtgagggaaaacatgaaattcctccctaattccgtcactaaattttgcgaccaaagaatatgtgagggattttattttttccg 1638544  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtg 185  Q
     ||| |||||||||||||||||||| ||||| || |||||    
T  1638545 tcactaatttccctccctaattttgtttttcctagtagtg 1638584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 32175876 - 32175747
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| ||||||| | |||||||| | ||||||||||||||||||||||||||||  ||||| ||||||||||||| |||||||    
T  32175876 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttattttttccg 32175777  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| ||||||||||  |||||||||||||    
T  32175776 tcactaatttccctcgttaattttgctttt 32175747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 46 - 169
Target Start/End: Complemental strand, 2275817 - 2275694
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||||||| |||||||||||||||||| | |||||||||||||||||||||||| ||| |||||| |||||||||| || |||||||    
T  2275817 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttccg 2275718  T
Q  146 acacaaatttccctccctaatttt 169  Q
     ||| |||||||||| ||||||||    
T  2275717 tcactaatttccctcgctaatttt 2275694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 55309352 - 55309222
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaatttta-tgttttcc 144  Q
    |||| |||||||||||||||| ||||||| | |||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| | | ||||||    
T  55309352 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttttcc 55309253  T
Q  145 gacacaaatttccctccctaattttgctttt 175  Q
    | ||| |||||||||| ||||||||||||||    
T  55309252 gtcactaatttccctcgctaattttgctttt 55309222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 54 - 175
Target Start/End: Original strand, 8878889 - 8879010
Alignment:
Q  54 ggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaat 153  Q
    ||||||||||||| |||||||||||||||||| | |||||| ||||||||||||||||||||| |||||| ||||  ||||||| ||||||| ||| |||    
T  8878889 ggaaatttagtgagggaaaacatgaaatccctctctaattctgtcactaaattttgcgaccaacgaatttctgagagattttattttttccgtcactaat 8878988  T
Q  154 ttccctccctaattttgctttt 175  Q
    ||||||| || |||||||||||    
T  8878989 ttccctctctgattttgctttt 8879010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 46 - 187
Target Start/End: Original strand, 12071960 - 12072101
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||||||||||||||||| |||||||| | |||||||||||||||||||||||| ||| |||||||||| |||||| || |||||      
T  12071960 ttagtgagggatatttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgatcaaggaatttatgaagaatttcattttttcga 12072059  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtgta 187  Q
     ||| |||||| ||| ||||||||||||||  ||||||||||    
T  12072060 tcactaatttcgctcgctaattttgctttttctaatagtgta 12072101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 19839177 - 19839306
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||| ||||||||||| ||||||| | |||||||| | |||||||||||||||||||||||||||| |||||| |||| ||||| || |||||||    
T  19839177 ttagcgaggaaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccg 19839276  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  19839277 tcactaatttccctcgctaattttgctttt 19839306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 22128451 - 22128322
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| ||||||| |||||||||| | |||||| ||||||||||||||||||||| |||||| ||||  ||||||| |||||||    
T  22128451 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgagagattttattttttccg 22128352  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| ||||||||||||| |||||| ||||    
T  22128351 tcactaatttccctccctgattttgttttt 22128322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 27040164 - 27040035
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||||||||||   ||||| ||||||||||| | |||||||    
T  27040164 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaattttcttttttccg 27040065  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  27040064 tcactaatttccctcgctaattttgctttt 27040035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 37378762 - 37378633
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| |||||||||||||||||| | |||||||||||||||||||||||||||  |||||| |||||||||| || |||||||    
T  37378762 ttagtgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccg 37378663  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||  ||||| |||| ||||||||||||||    
T  37378662 tcaataattttcctcgctaattttgctttt 37378633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 46286368 - 46286239
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||||||||||   ||||| ||||||||||||| |||||||    
T  46286368 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaattttattttttccg 46286269  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| ||||||| || ||||||||||||||    
T  46286268 tcactaatttccgtcactaattttgctttt 46286239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 60 - 175
Target Start/End: Original strand, 38619859 - 38619974
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||| | |||||||| | |||||||||||||||||||| ||||||||||||||||||||||||| || ||||||| ||  |||||||||    
T  38619859 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaagaatttatgaggaatttcattttttccgtcattaatttccct 38619958  T
Q  160 ccctaattttgctttt 175  Q
    | ||||||||||||||    
T  38619959 cgctaattttgctttt 38619974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 5473847 - 5473976
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||| ||||||||||| ||||||| | |||||||| | |||||||||||||||||||||||||||| |||||  |||||||||| || ||| |||    
T  5473847 ttagtgaggaaaatttagtgagggaaaacgtaaaatccctctttaattccgtcactaaattttgcgaccaaggaattggtgaggaatttcatttttcccg 5473946  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  5473947 tcactaatttccctcgctaattttgctttt 5473976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 36689675 - 36689804
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||  ||||||| |||||||||| | ||||||||||||||||||||||||||||| |||||||||| ||||| || ||||||     
T  36689675 ttagcgagggaaatttagtgtgggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttatgagaaatttcattttttcca 36689774  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| ||||||||||  |||||||| ||||    
T  36689775 tcactaatttccctcgttaattttgttttt 36689804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 51 - 175
Target Start/End: Original strand, 44783485 - 44783610
Alignment:
Q  51 gagggaaatttagtgaaggaaaacatgaaatccct-ttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacac 149  Q
    |||||| |||||  ||||||||||||||||||||| || ||||||||||| |||||||||||||||| |||||| |||||||||| || ||||||| |||    
T  44783485 gagggatatttatcgaaggaaaacatgaaatccctcttctaattccgtcattaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 44783584  T
Q  150 aaatttccctccctaattttgctttt 175  Q
     |||||||||| ||| ||||||||||    
T  44783585 taatttccctcgctagttttgctttt 44783610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 45532718 - 45532578
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| ||||||| | |||||||| | ||||||||||| |||||||||||| |||  ||||| |||||||||| || |||||||    
T  45532718 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgatcaagaaatttgtgaggaatttcattttttccg 45532619  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtgt 186  Q
     ||| ||||||||||  |||||||||||||  |||||||||    
T  45532618 tcactaatttccctcgttaattttgctttttctaatagtgt 45532578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 56 - 175
Target Start/End: Complemental strand, 4586887 - 4586768
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||||||| ||||||| | |||||||| | |||||||||||||||||||| ||| ||| |||||| |||||||||| || ||||||| ||| |||||    
T  4586887 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttacgatcaaggaatttgtgaggaatttcattttttccgtcactaattt 4586788  T
Q  156 ccctccctaattttgctttt 175  Q
    ||||| ||||||||||||||    
T  4586787 ccctcgctaattttgctttt 4586768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 60 - 175
Target Start/End: Original strand, 38645762 - 38645877
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||| | |||||||| | ||| ||||||||||||||||||||||||||||||| |||||||||| || ||||||| ||  |||||||||    
T  38645762 ttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcaataatttccct 38645861  T
Q  160 ccctaattttgctttt 175  Q
    | ||||||||||||||    
T  38645862 cgctaattttgctttt 38645877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 60 - 185
Target Start/End: Original strand, 12105995 - 12106119
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||||||||| |||| | ||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||  ||  |||||||||    
T  12105995 ttagtgagggaaaacatgaaacccctctctaattccgtcactaaattt-gcgaccaaagaatttatgagaaattttattttttccatcaataatttccct 12106093  T
Q  160 ccctaattttgcttttcttaatagtg 185  Q
    | |||||||| |||||  ||||||||    
T  12106094 cgctaattttactttttctaatagtg 12106119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 18051837 - 18051966
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | ||||||||||||||||||||||||||    ||||| |||| ||||| || |||||||    
T  18051837 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccgtgaaatttgtgagaaatttcattttttccg 18051936  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  18051937 tcactaatttccctcactaattttgctttt 18051966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 7112071 - 7111956
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||  | |||||||| |||||||||||||||||||||| |||||||  ||||| |||||||||| || ||||||| ||| |||||||||    
T  7112071 ttagtgagggaaaatgtaaaatccctctataattccgtcactaaatttttcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccct 7111972  T
Q  160 ccctaattttgctttt 175  Q
    | ||||||||||||||    
T  7111971 cgctaattttgctttt 7111956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 9670604 - 9670489
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||| | |||| ||| | |||||||||||||||||||||||||||| |||||| |||||||||| || ||||||| ||| |||||||||    
T  9670604 ttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 9670505  T
Q  160 ccctaattttgctttt 175  Q
    | |||||||| |||||    
T  9670504 cgctaatttttctttt 9670489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 60 - 175
Target Start/End: Original strand, 29625337 - 29625452
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||| |||||||||| | ||||||||||||||||||||||||| |  |||||| |||||||||| || ||||||| ||  |||||||||    
T  29625337 ttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgactatggaatttgtgaggaatttcattttttccgtcattaatttccct 29625436  T
Q  160 ccctaattttgctttt 175  Q
    | ||||||||||||||    
T  29625437 cgctaattttgctttt 29625452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 60 - 175
Target Start/End: Original strand, 30507999 - 30508114
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||  | |||||||| | |||||||||||||||||||||||||||| |||||| ||||||||||||| |||| || |||| |||| |||    
T  30507999 ttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatttttttcgtcacagattttcct 30508098  T
Q  160 ccctaattttgctttt 175  Q
    | ||||||||||||||    
T  30508099 cgctaattttgctttt 30508114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 56 - 186
Target Start/End: Original strand, 25026565 - 25026695
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||||||| ||||||| | ||||| || | ||||||||||||||||||||||||| || |||||| |||| ||||| || ||||||| ||| |||||    
T  25026565 aaatttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgagaaatttcattttttccgtcactaattt 25026664  T
Q  156 ccctccctaattttgcttttcttaatagtgt 186  Q
    ||||| |||||||| |||||  |||||||||    
T  25026665 ccctcactaattttactttttctaatagtgt 25026695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 51 - 169
Target Start/End: Original strand, 38223513 - 38223631
Alignment:
Q  51 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 150  Q
    ||||||||||||| || |||||||   |||||||| | |||||| ||||||||||||||||||||| |||||| | ||||||||||| ||||||| |||     
T  38223513 gagggaaatttagagagggaaaacgcaaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtaaggaattttattttttccgtcact 38223612  T
Q  151 aatttccctccctaatttt 169  Q
    ||| |||||||||||||||    
T  38223613 aatctccctccctaatttt 38223631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 13565054 - 13564925
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| ||||||| | |||| ||| | ||||||||||||||||||||  |||||| |||||| ||| |||||| ||  ||||||    
T  13565054 ttagtgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttatgaccaaggaatttgtgatgaatttcattatttccg 13564955  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  13564954 tcactaatttccctcgctaattttgctttt 13564925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 30269127 - 30268998
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||||| || ||||||  | ||||| || | ||||||||||||||||||||||||||||| |||||  ||||||||| || |||||||    
T  30269127 ttagtgagggaaatttagcgagggaaaatgtaaaatctctctctaattccgtcactaaattttgcgaccaaataatttgcgaggaatttcattttttccg 30269028  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     |||  ||||||||| ||||||||||||||    
T  30269027 tcactgatttccctcgctaattttgctttt 30268998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 30283062 - 30283191
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||||| || ||||||  | ||||| || | ||||||||||||||||||||||||||||| |||||  ||||||||| || |||||||    
T  30283062 ttagtgagggaaatttagcgagggaaaatgtaaaatctctctctaattccgtcactaaattttgcgaccaaataatttgcgaggaatttcattttttccg 30283161  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     |||  ||||||||| ||||||||||||||    
T  30283162 tcactgatttccctcgctaattttgctttt 30283191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 9238721 - 9238625
Alignment:
Q  89 taattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgcttttcttaatagtg 185  Q
    ||||||||||||||||||||||||||||  ||||| |||||||||| || ||||||| ||| |||||||||| |||||||||||||| ||| |||||    
T  9238721 taattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttttagtagtg 9238625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 51 - 175
Target Start/End: Complemental strand, 19680558 - 19680434
Alignment:
Q  51 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 150  Q
    ||||||||||| |||| ||||||| | |||||||| | |||||||||||||||||||||||||||   ||||| |||||||||| || ||||||| |||     
T  19680558 gagggaaattttgtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcact 19680459  T
Q  151 aatttccctccctaattttgctttt 175  Q
    || ||||||| |||||||| |||||    
T  19680458 aaattccctcactaatttttctttt 19680434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 22156740 - 22156652
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattt 134  Q
    |||| |||||| ||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| |||| |||||    
T  22156740 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaattt 22156652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 56 - 175
Target Start/End: Complemental strand, 13028945 - 13028826
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||||||| ||||||| | |||||||| | ||||||||||||||||||||||||||||  ||||| |||||||||  || ||||||| ||| |||||    
T  13028945 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattgcattttttccgtcactaattt 13028846  T
Q  156 ccctccctaattttgctttt 175  Q
     |||| |||| |||||||||    
T  13028845 tcctcgctaagtttgctttt 13028826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 56 - 175
Target Start/End: Original strand, 18714910 - 18715029
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||||| | | ||||| | |||||||| | ||||||||||||||||||||| |||||| |||||| ||||||||||||| ||||||| |||  ||||    
T  18714910 aaatttagtaaggaaaaacgtaaaatccctctctaattccgtcactaaattttgagaccaaggaatttgtgaggaattttattttttccgtcacttattt 18715009  T
Q  156 ccctccctaattttgctttt 175  Q
    ||||| ||||| ||||||||    
T  18715010 ccctcgctaatattgctttt 18715029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 24682444 - 24682337
Alignment:
Q  68 ggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaatt 167  Q
    ||||||| |||||||||| | |||||||  ||||||||||||||||||  |||||| ||||||||||||| ||||||| ||  |||||||||||||||||    
T  24682444 ggaaaacgtgaaatccctctctaattccaccactaaattttgcgaccatggaatttgtgaggaattttattttttccgtcattaatttccctccctaatt 24682345  T
Q  168 ttgctttt 175  Q
    || |||||    
T  24682344 tttctttt 24682337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 39234940 - 39235068
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatg-ttttcc 144  Q
    |||| ||||||||||||| |||||||||| ||||||| || ||  |||  || ||||||||||||||||||| ||||| |||| ||||||||| ||||||    
T  39234940 ttagtgagggaaatttagagaaggaaaacgtgaaatctctcta--attttgttactaaattttgcgaccaaaaaatttgtgagaaattttatgtttttcc 39235037  T
Q  145 gacacaaatttccctccctaattttgctttt 175  Q
    |  |||| |||||||||||||||||| ||||    
T  39235038 gttacaagtttccctccctaattttggtttt 39235068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 56 - 175
Target Start/End: Original strand, 54539294 - 54539413
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||||||| ||||||| | ||||| || | ||||| ||||||||||||||||||| || |||||| |||||||||| || ||||||| ||| |||||    
T  54539294 aaatttagtgagggaaaacgtaaaatcactctttaattgcgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattt 54539393  T
Q  156 ccctccctaattttgctttt 175  Q
     |||  ||||||||||||||    
T  54539394 tccttgctaattttgctttt 54539413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 51 - 169
Target Start/End: Original strand, 9913261 - 9913379
Alignment:
Q  51 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 150  Q
    ||||||| ||||| || ||||||| |||||||||| | |||||| |||||||||||||||||||||  || || ||||| |||| || ||||||| |||     
T  9913261 gagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaagaaaattgtgagggatttaattttttccgtcact 9913360  T
Q  151 aatttccctccctaatttt 169  Q
    ||||| |||||||||||||    
T  9913361 aattttcctccctaatttt 9913379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 54 - 176
Target Start/End: Original strand, 29238429 - 29238551
Alignment:
Q  54 ggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaat 153  Q
    ||||||||||||| | ||||||| ||||| || | |||||| ||||||||||||||  |||||||||||| ||||  ||||||| ||||||| ||  |||    
T  29238429 ggaaatttagtgaggaaaaacataaaatctctatctaattctgtcactaaattttgaaaccaaagaatttgtgagagattttattttttccgtcaataat 29238528  T
Q  154 ttccctccctaattttgcttttc 176  Q
    ||||||||||| ||||| |||||    
T  29238529 ttccctccctagttttgtttttc 29238551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 89 - 175
Target Start/End: Original strand, 42055438 - 42055524
Alignment:
Q  89 taattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 175  Q
    ||||||||| |||||||||||||||||| |||||| |||||||||| || |||| || |||| ||||||||| ||||||||||||||    
T  42055438 taattccgttactaaattttgcgaccaaggaatttgtgaggaatttcatttttttcgtcacagatttccctcgctaattttgctttt 42055524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 60 - 169
Target Start/End: Complemental strand, 9239406 - 9239297
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||| |||||||||| | ||||||||||| | |||||||||||||| |||||| |||| ||||| || ||||||| ||| |||||||||    
T  9239406 ttagtgagggaaaacgtgaaatccctctctaattccgtcattcaattttgcgaccaaggaatttgtgagcaatttcattttttccgtcactaatttccct 9239307  T
Q  160 ccctaatttt 169  Q
    |  |||||||    
T  9239306 cgttaatttt 9239297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 54 - 175
Target Start/End: Original strand, 16915375 - 16915496
Alignment:
Q  54 ggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaat 153  Q
    ||||||||||||| |||||| |||||||| || | |||||  |||||||||||||||||||||  ||||| ||||  ||||||| ||||||  ||| |||    
T  16915375 ggaaatttagtgagggaaaatatgaaatctctctctaattttgtcactaaattttgcgaccaacaaatttgtgagagattttattttttccatcactaat 16915474  T
Q  154 ttccctccctaattttgctttt 175  Q
    || ||||||| |||||||||||    
T  16915475 tttcctccctgattttgctttt 16915496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 54 - 175
Target Start/End: Complemental strand, 30568130 - 30568009
Alignment:
Q  54 ggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaat 153  Q
    |||||||| |||| ||||||| | ||||| || | ||||||||||| |||||||| |||||| ||||||| |||||||||| || ||||||| ||| |||    
T  30568130 ggaaattttgtgagggaaaacgtaaaatctctctctaattccgtcattaaattttacgaccatagaatttgtgaggaatttcattttttccgtcactaat 30568031  T
Q  154 ttccctccctaattttgctttt 175  Q
    ||| ||| ||||||||| ||||    
T  30568030 ttcgctcgctaattttgttttt 30568009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 72 - 155
Target Start/End: Original strand, 313611 - 313694
Alignment:
Q  72 aacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    |||||||||||||| | |||||  || ||||||||||||||||||||||||||||||| ||||||| ||||||| ||| |||||    
T  313611 aacatgaaatccctctctaattatgttactaaattttgcgaccaaagaatttatgagggattttattttttccgtcactaattt 313694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 4606954 - 4606828
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||  ||||||| || | ||||||||||||||||||||||| ||||  ||||| |||   ||||||| || |||| ||| |||||||||    
T  4606954 ttagtgagggaaaaagtgaaatcactctctaattccgtcactaaattttgcggccaagaaatttgtgacagattttattttgtccgtcactaatttccct 4606855  T
Q  160 ccctaattttgcttttcttaatagtgt 186  Q
    |||||||||| |||||| || ||||||    
T  4606854 ccctaattttacttttcctagtagtgt 4606828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 51 - 115
Target Start/End: Complemental strand, 37761976 - 37761912
Alignment:
Q  51 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgacca 115  Q
    |||| ||||||||||| ||||||| |||||||||| | |||||||||||||||||||||||||||    
T  37761976 gaggaaaatttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 37761912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 56 - 175
Target Start/End: Complemental strand, 4627207 - 4627088
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||||||| ||||||  | ||||| || | ||||| |||||||||||||| ||| |||  ||||| |||||||||| || ||||||| ||  |||||    
T  4627207 aaatttagtgagggaaaatgtaaaatctctctctaatttcgtcactaaattttacgatcaagaaatttgtgaggaatttcattttttccgtcattaattt 4627108  T
Q  156 ccctccctaattttgctttt 175  Q
    ||||| ||||||||||||||    
T  4627107 ccctcgctaattttgctttt 4627088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 60 - 155
Target Start/End: Original strand, 6553816 - 6553911
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||| ||| |||||||||||||| | |||||  || ||||||||||||||||||  ||||||||||| ||||||| ||||||| ||| |||||    
T  6553816 ttagtgagggataacatgaaatccctctctaattatgttactaaattttgcgaccaagaaatttatgagggattttattttttccgtcactaattt 6553911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 60 - 155
Target Start/End: Original strand, 14944758 - 14944853
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||| ||||||| | |||||||| | ||||||||||||||||||||||||||||  ||||| |||||||||| || |||| || ||| |||||    
T  14944758 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttacgtcactaattt 14944853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 175
Target Start/End: Complemental strand, 30420149 - 30420043
Alignment:
Q  69 gaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattt 168  Q
    ||||||||||||| ||| | ||||| |||||||||||  | |||||||  ||||| | | ||||||||| ||||||| ||| ||||| ||||||||||||    
T  30420149 gaaaacatgaaattcctctctaatttcgtcactaaatgcttcgaccaagtaatttgtaatgaattttattttttccgtcactaattttcctccctaattt 30420050  T
Q  169 tgctttt 175  Q
    |||||||    
T  30420049 tgctttt 30420043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 46 - 155
Target Start/End: Complemental strand, 18744209 - 18744100
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | ||||||||||||||||||||  |||||   ||||| |||| ||||| || |||||||    
T  18744209 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttatgaccatgaaatttgtgagaaatttcattttttccg 18744110  T
Q  146 acacaaattt 155  Q
     ||| |||||    
T  18744109 tcactaattt 18744100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 70 - 185
Target Start/End: Original strand, 3613017 - 3613133
Alignment:
Q  70 aaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttcc-gacacaaatttccctccctaattt 168  Q
    ||||| |||||| ||| | ||||| |||||||||| ||||||||||| |||||| ||||| | ||||| ||||   | ||| || |||||||||||||||    
T  3613017 aaaacgtgaaattcctctctaatttcgtcactaaaatttgcgaccaaggaatttgtgagggaatttattttttttagccaccaaattccctccctaattt 3613116  T
Q  169 tgcttttcttaatagtg 185  Q
    |||||||  ||||||||    
T  3613117 tgctttttctaatagtg 3613133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 89 - 169
Target Start/End: Original strand, 34557224 - 34557304
Alignment:
Q  89 taattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaatttt 169  Q
    ||||||||||| ||||||||| |||||| |||||| ||| | ||||||| ||||||| ||| ||||| |||| ||||||||    
T  34557224 taattccgtcattaaattttgtgaccaaggaatttgtgaaggattttattttttccgtcactaattttcctcactaatttt 34557304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 55 - 175
Target Start/End: Original strand, 25225106 - 25225224
Alignment:
Q  55 gaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatt 154  Q
    ||||||||| ||| |||| | |||||||||| | |||||| || | |||||||||||| ||||||||||   ||  ||||||| ||||||| ||   |||    
T  25225106 gaaatttagagaaagaaatcgtgaaatccctctctaattctgttattaaattttgcgatcaaagaatttgacag--attttatattttccgtcattgatt 25225203  T
Q  155 tccctccctaattttgctttt 175  Q
    ||||||||||||||| |||||    
T  25225204 tccctccctaatttttctttt 25225224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 112
Target Start/End: Original strand, 45091282 - 45091338
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcga 112  Q
    ||||||||||| ||||||| | |||||| | | ||||||||||||||||||||||||    
T  45091282 aaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcga 45091338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 71 - 142
Target Start/End: Original strand, 23104371 - 23104442
Alignment:
Q  71 aaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgtttt 142  Q
    ||||||||||||||| | ||||   ||| |||||||||||||||| ||||||| ||| ||||||||| ||||    
T  23104371 aaacatgaaatccctctctaatcatgtccctaaattttgcgaccatagaatttgtgatgaattttatttttt 23104442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 105; Significance: 2e-52; HSPs: 88)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 30219334 - 30219474
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| | |||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30219334 ttagtgagggaaatttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttatgaggaattttatgttttccg 30219433  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtgt 186  Q
     |||||||||||||||||||||||||||||| || ||||||    
T  30219434 tcacaaatttccctccctaattttgcttttcctagtagtgt 30219474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 51 - 185
Target Start/End: Original strand, 19610339 - 19610473
Alignment:
Q  51 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 150  Q
    |||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||    
T  19610339 gagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcaca 19610438  T
Q  151 aatttccctccctaattttgcttttcttaatagtg 185  Q
    |||||||||||||||||||||||||| || |||||    
T  19610439 aatttccctccctaattttgcttttcctagtagtg 19610473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 46 - 185
Target Start/End: Original strand, 16299857 - 16299996
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  16299857 ttagtgagggaaatttggtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccg 16299956  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtg 185  Q
     |||||||||| ||||||||||||||||||| || |||||    
T  16299957 tcacaaatttcgctccctaattttgcttttcctagtagtg 16299996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 46 - 185
Target Start/End: Original strand, 29215988 - 29216127
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||    
T  29215988 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccg 29216087  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtg 185  Q
     ||||||||| ||||| |||||||||||||| || |||||    
T  29216088 tcacaaattttcctccataattttgcttttcctagtagtg 29216127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 15064117 - 15063991
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||||||||||| || | |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||    
T  15064117 ttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccct 15064018  T
Q  160 ccctaattttgcttttcttaatagtgt 186  Q
    ||||||||||||||||| || ||||||    
T  15064017 ccctaattttgcttttcctagtagtgt 15063991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 60 - 185
Target Start/End: Complemental strand, 50665761 - 50665636
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| |||||||||||||||||| | ||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||| || ||||||||||    
T  50665761 ttagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgatcaaagaatttgtgaggaattttatgttttccgtcataaatttccct 50665662  T
Q  160 ccctaattttgcttttcttaatagtg 185  Q
    | |||||||||||||||||| |||||    
T  50665661 ctctaattttgcttttcttagtagtg 50665636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 25882566 - 25882706
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||||||| |||||||||||||||||| | |||||||||||||||||||| |||||||||||||| |||||||||| || |||||||    
T  25882566 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcattttttccg 25882665  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtgt 186  Q
     ||| |||||||||| ||||||||||||||  |||||||||    
T  25882666 tcactaatttccctcgctaattttgctttttctaatagtgt 25882706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 27449084 - 27449213
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| ||||||| | |||||||| | ||||||||||||||||||||||||||||||||||| |||||||||| || |||||||    
T  27449084 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccg 27449183  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  27449184 tcactaatttccctcgctaattttgctttt 27449213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 19270003 - 19269863
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| ||||||| | |||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  19270003 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctttaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 19269904  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtgt 186  Q
     ||| |||||||||| ||||||||||||||  |||||||||    
T  19269903 tcactaatttccctcgctaattttgctttttctaatagtgt 19269863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 46 - 185
Target Start/End: Complemental strand, 18091686 - 18091547
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||||||| ||||||||| |||||||| | ||||||||||||||||||||||||||||| ||||| |||||||||| || |||||||    
T  18091686 ttagtgagggatatttagtgagggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccg 18091587  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtg 185  Q
     ||| |||||||||| |||||||||||||| ||| |||||    
T  18091586 tcactaatttccctcgctaattttgctttttttagtagtg 18091547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 46 - 185
Target Start/End: Original strand, 49915447 - 49915586
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||| ||  ||||| | ||| |||||||||||||||    
T  49915447 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgactaagaaatttgttagggattttatgttttccg 49915546  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtg 185  Q
     ||||||||||||||  ||||||| ||||||||| |||||    
T  49915547 tcacaaatttccctctttaattttacttttcttagtagtg 49915586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 60 - 185
Target Start/End: Original strand, 5744426 - 5744551
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||||||||||| || | ||||||||||||||||||||||||| || |||||| ||||| ||||||||||||||| ||||||||| |||    
T  5744426 ttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggcattttatgttttccgtcacaaattttcct 5744525  T
Q  160 ccctaattttgcttttcttaatagtg 185  Q
    ||||||||||||||||| || |||||    
T  5744526 ccctaattttgcttttcctagtagtg 5744551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 60 - 185
Target Start/End: Original strand, 5781385 - 5781510
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||||||||||| || | ||||||||||||||||||||||||| || |||||| ||||| ||||||||||||||| ||||||||| |||    
T  5781385 ttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggcattttatgttttccgtcacaaattttcct 5781484  T
Q  160 ccctaattttgcttttcttaatagtg 185  Q
    ||||||||||||||||| || |||||    
T  5781485 ccctaattttgcttttcctagtagtg 5781510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 11915754 - 11915883
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| ||||||| | |||||||| | ||||||||||||||||||||||||||||  |||||||||||||||| || |||||||    
T  11915754 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaatttcatattttccg 11915853  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  11915854 tcactaatttccctcgctaattttgctttt 11915883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 76 - 185
Target Start/End: Original strand, 37283549 - 37283658
Alignment:
Q  76 tgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 175  Q
    |||||||||| | ||||||||||||||||||||  |||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  37283549 tgaaatccctctctaattccgtcactaaattttatgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccctccctaattttgctttt 37283648  T
Q  176 cttaatagtg 185  Q
    | ||||||||    
T  37283649 cctaatagtg 37283658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 5260933 - 5261062
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||| |||||| ||||||| | |||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  5260933 ttagtgagggaaatatagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 5261032  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  5261033 tcactaatttccctcactaattttgctttt 5261062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 18104669 - 18104540
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| |||||||||||||||||| | |||||||||||||||||||||||||||  |||||| |||||||||| || |||||||    
T  18104669 ttagtgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttaattttttccg 18104570  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||  |||||||||| ||||||||||||||    
T  18104569 tcaataatttccctcgctaattttgctttt 18104540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 56 - 191
Target Start/End: Original strand, 13921331 - 13921466
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||||||| ||||||| | |||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || ||||||| ||| |||||    
T  13921331 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 13921430  T
Q  156 ccctccctaattttgcttttcttaatagtgtaataa 191  Q
     |||| ||||||||||||||  || |||||||||||    
T  13921431 tcctcgctaattttgctttttctagtagtgtaataa 13921466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 60 - 175
Target Start/End: Original strand, 26098823 - 26098938
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || ||||||  ||| |||||||||    
T  26098823 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccatcactaatttccct 26098922  T
Q  160 ccctaattttgctttt 175  Q
    | ||||||||||||||    
T  26098923 cgctaattttgctttt 26098938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 56 - 175
Target Start/End: Original strand, 48404866 - 48404985
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||||||| ||||||| | |||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || ||||||| ||| |||||    
T  48404866 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 48404965  T
Q  156 ccctccctaattttgctttt 175  Q
    ||||| ||||||||||||||    
T  48404966 ccctcgctaattttgctttt 48404985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 18539800 - 18539929
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||||||||||   ||||| |||||||||| || |||||||    
T  18539800 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttttgaggaatttcattttttccg 18539899  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  18539900 tcactaatttccctctctaattttgctttt 18539929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 19223445 - 19223574
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||  ||||||| | |||||||| | |||||||||||||||||||| ||||||| |||||| |||||||||| || |||||||    
T  19223445 ttagtgagggaaatttagtgggggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccg 19223544  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  19223545 tcaccaatttccctcgctaattttgctttt 19223574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 46 - 170
Target Start/End: Original strand, 17762638 - 17762762
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||||||| ||||||||||||||| || | ||||||||||||||||||||| |||||| |||||| |||||||||| || |||||||    
T  17762638 ttagtgagggatatttagtgagggaaaacatgaaatcgctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattttttccg 17762737  T
Q  146 acacaaatttccctccctaattttg 170  Q
     ||| |||||||||| |||||||||    
T  17762738 tcactaatttccctcgctaattttg 17762762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 46 - 170
Target Start/End: Original strand, 19063958 - 19064082
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||||||| ||||||||||||||| || | ||||||||||||||||||||| |||||| |||||| |||||||||| || |||||||    
T  19063958 ttagtgagggatatttagtgagggaaaacatgaaatcgctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattttttccg 19064057  T
Q  146 acacaaatttccctccctaattttg 170  Q
     ||| |||||||||| |||||||||    
T  19064058 tcactaatttccctcgctaattttg 19064082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 56 - 187
Target Start/End: Original strand, 21088758 - 21088887
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||||||| |||||||||||||||||| |  ||||||||||  ||||||||||||||| |||||| ||||  ||||||| ||||||| ||| |||||    
T  21088758 aaatttagtgagggaaaacatgaaatccctctcgaattccgtcatcaaattttgcgaccaaggaatttgtgag--attttattttttccgtcactaattt 21088855  T
Q  156 ccctccctaattttgcttttcttaatagtgta 187  Q
    |||||||||| ||||||||||||| |||||||    
T  21088856 ccctccctaactttgcttttcttagtagtgta 21088887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 46 - 169
Target Start/End: Original strand, 8428167 - 8428290
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||||||| ||||||||||||||| || | |||||||||||||||||||| ||||||| |||||| |||||||||| || |||||||    
T  8428167 ttagtgagggatatttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccg 8428266  T
Q  146 acacaaatttccctccctaatttt 169  Q
     ||| |||||||||| ||||||||    
T  8428267 tcactaatttccctcgctaatttt 8428290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 46 - 185
Target Start/End: Original strand, 21020061 - 21020200
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||| | |||||||| ||||||||| |||||| | | |||||||||||||||||||||| ||||| |||||| ||||  ||||||| |||||||    
T  21020061 ttagtgagggcagtttagtgagggaaaacataaaatccttctctaattccgtcactaaattttgcaaccaaggaatttgtgagagattttattttttccg 21020160  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtg 185  Q
     ||| |||||||||||||||||||||||||| || |||||    
T  21020161 tcactaatttccctccctaattttgcttttcctagtagtg 21020200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 1628211 - 1628340
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||||| || ||||||| |||||||||| | ||||| |||||||||||||| |||| || |||||||||||||||||||| ||||||     
T  1628211 ttagtgagggaaatttagagagggaaaacgtgaaatccctctctaatttcgtcactaaattttacgactaaggaatttatgaggaattttattttttcca 1628310  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||  ||||||||||||||||||| |||||    
T  1628311 tcattaatttccctccctaattttactttt 1628340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 8110335 - 8110464
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| ||||||| | |||| ||| | ||||||||||| |||||||| ||||||| |||||| |||||||||| || |||||||    
T  8110335 ttagtgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtcattaaattttccgaccaaggaatttgtgaggaatttcattttttccg 8110434  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  8110435 tcactaatttccctcactaattttgctttt 8110464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 58 - 175
Target Start/End: Complemental strand, 10941792 - 10941675
Alignment:
Q  58 atttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttcc 157  Q
    ||||| ||| |||||||||||||||||| | ||||||| |||||||||||||||||||| |||||| |||||||||| || ||||||| ||| |||||||    
T  10941792 atttaatgagggaaaacatgaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 10941693  T
Q  158 ctccctaattttgctttt 175  Q
    ||  ||||||||||||||    
T  10941692 cttactaattttgctttt 10941675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 11007822 - 11007693
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| ||||||| | |||||||| | ||||||||||||||||||||||||||||  ||||| ||| |||||| || |||||||    
T  11007822 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgacgaatttcattttttccg 11007723  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||  ||||||||||||||    
T  11007722 tcactaatttcccttactaattttgctttt 11007693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 26390773 - 26390644
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| |||| |||| ||| |||||||||||||| | ||||||||||||||||||||| |||||| |||||| |||||||||| || |||||||    
T  26390773 ttagtgagggatattttgtgagggataacatgaaatccctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattttttccg 26390674  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||| ||| ||||||||||||||    
T  26390673 tcactaatttctctcgctaattttgctttt 26390644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 29704171 - 29704042
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| ||||  |||||| |||||||||| | |||||||||||||||||||||||| || | ||||| |||||||||| || |||||||    
T  29704171 ttagtgagggaaattttgtgagagaaaacgtgaaatccctctttaattccgtcactaaattttgcgatcataaaatttgtgaggaatttcattttttccg 29704072  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  29704071 tcactaatttccctcgctaattttgctttt 29704042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 36543745 - 36543874
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| |||||||||||||||||| | ||||| ||||||||||||||||||||||||||| | ||||  ||||||| ||||||     
T  36543745 ttagtgagggaaattttgtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatctgtgagagattttattttttcca 36543844  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| ||||| ||||||||||||| |||||    
T  36543845 tcactaattttcctccctaatttttctttt 36543874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 51 - 175
Target Start/End: Complemental strand, 1311093 - 1310969
Alignment:
Q  51 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 150  Q
    |||||||||||||||| ||||||| | |||||||| | |||||||||||||||||||||||||||| |||||| |||||| ||| || ||||||| |||     
T  1311093 gagggaaatttagtgatggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggattttcattttttccgtcact 1310994  T
Q  151 aatttccctccctaattttgctttt 175  Q
    ||||| |||  ||||||||||||||    
T  1310993 aattttccttgctaattttgctttt 1310969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 51 - 175
Target Start/End: Complemental strand, 11837348 - 11837224
Alignment:
Q  51 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 150  Q
    |||||| | ||||||| |||||||||||||| ||| | |||||||||||||||||||| |||||||||||||| |||||||||| || ||||||  |||     
T  11837348 gagggatacttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcattttttccatcacg 11837249  T
Q  151 aatttccctccctaattttgctttt 175  Q
    |||||||||| ||||||||| ||||    
T  11837248 aatttccctcgctaattttgttttt 11837224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 51 - 175
Target Start/End: Original strand, 29956373 - 29956497
Alignment:
Q  51 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 150  Q
    ||||||||||| |||| ||||||  |||||||||||| |||||||||||||||||||||||||||  |||||| |||||||||| || ||||||  |||     
T  29956373 gagggaaattttgtgagggaaaatgtgaaatccctttctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccatcact 29956472  T
Q  151 aatttccctccctaattttgctttt 175  Q
    |||||||||| |||||||| |||||    
T  29956473 aatttccctcgctaattttactttt 29956497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 51 - 175
Target Start/End: Original strand, 30005528 - 30005652
Alignment:
Q  51 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 150  Q
    ||||||||||| |||| ||||||  |||||||||||| |||||||||||||||||||||||||||  |||||| |||||||||| || ||||||  |||     
T  30005528 gagggaaattttgtgagggaaaatgtgaaatccctttctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccatcact 30005627  T
Q  151 aatttccctccctaattttgctttt 175  Q
    |||||||||| |||||||| |||||    
T  30005628 aatttccctcgctaattttactttt 30005652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 56 - 175
Target Start/End: Original strand, 21816727 - 21816846
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||||||| ||||||| | |||| ||| | |||||||||||||||||||||||||||| |||||| |||||||||| || ||||||| ||| |||||    
T  21816727 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 21816826  T
Q  156 ccctccctaattttgctttt 175  Q
    ||||| |||||||| |||||    
T  21816827 ccctcgctaatttttctttt 21816846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 51 - 185
Target Start/End: Complemental strand, 23217342 - 23217208
Alignment:
Q  51 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 150  Q
    |||| |||||||| || ||||||| |||||||||| | ||||||||||||||||||||| ||||| ||||||| |||||||||| || ||||||  ||      
T  23217342 gaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgggaccatagaatttgtgaggaatttgattttttccctcatt 23217243  T
Q  151 aatttccctccctaattttgcttttcttaatagtg 185  Q
    ||||||||||||||||||| ||||| ||| |||||    
T  23217242 aatttccctccctaatttttctttttttagtagtg 23217208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 60 - 185
Target Start/End: Complemental strand, 1745612 - 1745488
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||| | ||||| || | |||||||||||||||||||||||||||| |||||| |||||||||| || ||||||| ||| |||||||||    
T  1745612 ttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcat-ttttccgtcactaatttccct 1745514  T
Q  160 ccctaattttgcttttcttaatagtg 185  Q
    | |||||||||||||| ||| |||||    
T  1745513 cgctaattttgctttttttagtagtg 1745488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 4393489 - 4393360
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | ||||||||||||||||||||||||||    ||||| |||| ||||| || |||||||    
T  4393489 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccgtgaaatttgtgagaaatttcattttttccg 4393390  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  4393389 tcactaatttccctcactaattttgctttt 4393360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 7623670 - 7623541
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||  |||||||||| | ||||||||||||||||||||||||||||||||| | |||| ||||| || |||||||    
T  7623670 ttagtgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatctgtgagaaatttcattttttccg 7623571  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| || ||||| |||||    
T  7623570 tcactaatttccctcgctgatttttctttt 7623541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 9652574 - 9652703
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | ||||||||||||||||||||||||| |   ||||| |||||||||| || |||||||    
T  9652574 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgactatgaaatttgtgaggaatttcattttttccg 9652673  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| | ||||||||||||    
T  9652674 tcactaatttccctcgccaattttgctttt 9652703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 11085481 - 11085352
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||| |||||||||||| |||||   |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  11085481 ttagtgagagaaatttagtgagggaaattgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttatgaggaatttcattttttccg 11085382  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
      ||  ||||| ||| |||||||| |||||    
T  11085381 ttactgatttctctcgctaattttactttt 11085352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 46 - 155
Target Start/End: Complemental strand, 17582440 - 17582331
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||||||||||  |||||| ||||||||||||| |||||||    
T  17582440 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaattttattttttccg 17582341  T
Q  146 acacaaattt 155  Q
     ||| |||||    
T  17582340 tcactaattt 17582331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 28389969 - 28390098
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| ||||||| |||||||| | | |||||||||||||||||||||||||||| |||||| ||||  ||||||| |||||||    
T  28389969 ttagtgagggaaatttagtgagggaaaacgtgaaatccttctctaattccgtcactaaattttgcgaccaacgaatttgtgagagattttattttttccg 28390068  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| ||||| |||| || ||||| |||||    
T  28390069 tcactaattttcctctctgattttactttt 28390098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 56 - 185
Target Start/End: Original strand, 29236050 - 29236179
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||||||| ||||||| | |||||||| | ||||||||||||||||||||||||||||  | ||| |||| ||||| || ||||||| ||| |||||    
T  29236050 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaattttgtgagaaatttcattttttccgtcactaattt 29236149  T
Q  156 ccctccctaattttgcttttcttaatagtg 185  Q
    ||||| ||||||||||||||  ||||||||    
T  29236150 ccctcgctaattttgctttttctaatagtg 29236179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 46 - 185
Target Start/End: Complemental strand, 26830581 - 26830441
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaatttta-tgttttcc 144  Q
    |||| ||||||||||||| || ||||||| |||||||||| | |||||||||||| ||||||||||||||  |||||| |||||||||||| | ||||||    
T  26830581 ttagtgagggaaatttagagagggaaaacgtgaaatccctctctaattccgtcacaaaattttgcgaccatggaatttgtgaggaattttatttttttcc 26830482  T
Q  145 gacacaaatttccctccctaattttgcttttcttaatagtg 185  Q
    | ||  ||||| ||||||||||||| |||||  ||||||||    
T  26830481 gtcattaattttcctccctaatttttctttttctaatagtg 26830441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 13905163 - 13905048
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||| | |||||||| | ||||||||||||||||||||||||||||  ||||| |||||||||| || ||||||| ||| |||||| ||    
T  13905163 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttcgct 13905064  T
Q  160 ccctaattttgctttt 175  Q
    | ||||||||||||||    
T  13905063 ctctaattttgctttt 13905048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 46 - 155
Target Start/End: Original strand, 19545506 - 19545615
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| | ||||| | |||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  19545506 ttagtgagggaaatttagtgaggaaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 19545605  T
Q  146 acacaaattt 155  Q
     ||| |||||    
T  19545606 tcactaattt 19545615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 36564578 - 36564449
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||| |||||||||||| | ||||| |||||||||||| |||||||||||||| | | ||| ||||||| ||||||     
T  36564578 ttagtgagggaaattttgtgagggaaagcatgaaatccctctctaatttcgtcactaaattctgcgaccaaagaatctgtcagggattttattttttcca 36564479  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| ||||| ||||||||||||| |||||    
T  36564478 tcactaattttcctccctaatttttctttt 36564449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 51 - 171
Target Start/End: Original strand, 31250089 - 31250209
Alignment:
Q  51 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 150  Q
    ||||||||||||| || ||||||||  |||||||| | |||||| |||||||||||||||||||||  ||||| | ||||||||||| ||||||| |||     
T  31250089 gagggaaatttagagagggaaaacacaaaatccctctctaattctgtcactaaattttgcgaccaagaaatttgtaaggaattttattttttccgtcact 31250188  T
Q  151 aatttccctccctaattttgc 171  Q
    ||| | |||||||||||||||    
T  31250189 aatcttcctccctaattttgc 31250209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 60 - 175
Target Start/End: Original strand, 5565732 - 5565847
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||| |||||||||| | |||||  |||||||||||||||||||||  ||||| ||||  ||||||| ||||||| ||| |||||||||    
T  5565732 ttagtgagggaaaacgtgaaatccctctctaattatgtcactaaattttgcgaccaagaaatttgtgagagattttattttttccgtcactaatttccct 5565831  T
Q  160 ccctaattttgctttt 175  Q
    |||| |||||||||||    
T  5565832 ccctgattttgctttt 5565847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 17269729 - 17269614
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| | |||| ||||||||||| | |||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||  |   ||||||| |    
T  17269729 ttagtgaggaaaaatatgaaatccctctctaattccgtcactaaattttgcgatcaaagaatttgtgaggaattttattttttccatcgttaatttccat 17269630  T
Q  160 ccctaattttgctttt 175  Q
    | ||||||||||||||    
T  17269629 cgctaattttgctttt 17269614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 60 - 175
Target Start/End: Original strand, 23773487 - 23773602
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||| | |||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || | ||||| ||| |||||||||    
T  23773487 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttcttccgtcactaatttccct 23773586  T
Q  160 ccctaattttgctttt 175  Q
      ||||||||| ||||    
T  23773587 tactaattttgttttt 23773602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 43329888 - 43329773
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||  | |||||| | | |||||||||||||||||||| ||||||| |||||| |||||||||| || ||||||| ||| |||||||||    
T  43329888 ttagtgagggaaaatgtaaaatccttctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 43329789  T
Q  160 ccctaattttgctttt 175  Q
    | ||||||||||||||    
T  43329788 cgctaattttgctttt 43329773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 46012853 - 46012738
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| |||||||||||||||||| | |||||  ||||||||||||||||| ||| |||||| ||||  ||||||| ||||||| ||| ||||| |||    
T  46012853 ttagtgagggaaaacatgaaatccctctctaattttgtcactaaattttgcgatcaaggaatttgtgagagattttattttttccgtcactaattttcct 46012754  T
Q  160 ccctaattttgctttt 175  Q
    |||| |||||||||||    
T  46012753 ccctgattttgctttt 46012738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 10803716 - 10803846
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaatttta-tgttttcc 144  Q
    |||| |||||||||||||||| ||||||| | |||| ||| | ||||||||||| ||||||||||||||||  ||||| |||||||||| | | ||||||    
T  10803716 ttagcgagggaaatttagtgagggaaaacgtaaaattcctctttaattccgtcattaaattttgcgaccaagaaatttgtgaggaatttcatttttttcc 10803815  T
Q  145 gacacaaatttccctccctaattttgctttt 175  Q
    | ||  |||||||||||||||||| ||||||    
T  10803816 gtcattaatttccctccctaatttggctttt 10803846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 70 - 175
Target Start/End: Original strand, 8546265 - 8546370
Alignment:
Q  70 aaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaatttt 169  Q
    ||||| |||||||||| | |||||||||||||||||||||||| ||  |||||| |||||||||| || ||||||| ||| ||||| |||| ||||||||    
T  8546265 aaaacgtgaaatccctctctaattccgtcactaaattttgcgatcatggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaatttt 8546364  T
Q  170 gctttt 175  Q
    ||||||    
T  8546365 gctttt 8546370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 11219134 - 11219263
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||| |||||| |||| ||||||| |||||||||| | ||||||||||| ||||||||||||| |  |||||| |||| ||||| || |||||||    
T  11219134 ttagtgaggaaaattttgtgagggaaaacgtgaaatccctctctaattccgtcattaaattttgcgactatggaatttgtgagaaatttcattttttccg 11219233  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||| ||||    
T  11219234 tcactaatttccctcgctaattttgttttt 11219263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 46 - 143
Target Start/End: Complemental strand, 27212920 - 27212823
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttc 143  Q
    |||| ||||||||||||| || | ||||| |||||||||| | ||||||||||||||||||||||||| ||||||||| ||||| ||||||| |||||    
T  27212920 ttagtgagggaaatttagagaggaaaaacgtgaaatccctctttaattccgtcactaaattttgcgactaaagaatttgtgagggattttattttttc 27212823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 54 - 175
Target Start/End: Original strand, 27968919 - 27969040
Alignment:
Q  54 ggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaat 153  Q
    ||||||||||||| |||||||||||||||||| | |||||| |||| ||||||||||||||||  ||  | ||||  ||||||| | ||||| ||| |||    
T  27968919 ggaaatttagtgagggaaaacatgaaatccctctctaattctgtcattaaattttgcgaccaacaaaggtgtgagagattttatttgttccgtcactaat 27969018  T
Q  154 ttccctccctaattttgctttt 175  Q
    |||||||||| |||||||||||    
T  27969019 ttccctccctgattttgctttt 27969040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 28859597 - 28859710
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||||||| | ||||| | |||||||| | |||||||||||||||||||||| ||||| |||||| |||||||||| || ||||||| ||| |||||    
T  28859597 aaatttagtgaggtaaaacgtaaaatccctctctaattccgtcactaaattttgcaaccaaggaatttgtgaggaatttcattttttccgtcactaattt 28859696  T
Q  156 ccctccctaatttt 169  Q
     |||| ||||||||    
T  28859697 tcctcgctaatttt 28859710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 3461435 - 3461320
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||| | |||||||| | ||||||||||| |||||||||||| |||  ||||| ||||||||||||| ||||| | ||| ||||||| |    
T  3461435 ttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgatcaagaaatttgtgaggaattttattttttctgtcactaatttcctt 3461336  T
Q  160 ccctaattttgctttt 175  Q
    | ||||||||||||||    
T  3461335 cgctaattttgctttt 3461320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 46 - 185
Target Start/End: Original strand, 15490031 - 15490169
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||||||||  |||||| |||||||||| | |||||  |||||||||||||||||||||| ||||| ||||  ||||||| |||| ||    
T  15490031 ttagtgagggaaatttagtgagagaaaacgtgaaatccctctttaattt-gtcactaaattttgcgaccaaaaaatttgtgagagattttatttttttcg 15490129  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtg 185  Q
     ||| |||||  |||||| ||||||||||| ||| |||||    
T  15490130 tcactaatttttctccctgattttgctttttttagtagtg 15490169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 55 - 142
Target Start/End: Original strand, 20088405 - 20088492
Alignment:
Q  55 gaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgtttt 142  Q
    |||||||||||| | |||||||||||||| | | ||||||| ||||||||||||| |||||||||||||||||| |||||||| ||||    
T  20088405 gaaatttagtgaggcaaaacatgaaatccttctctaattccatcactaaattttgtgaccaaagaatttatgagaaattttatttttt 20088492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 89 - 186
Target Start/End: Complemental strand, 6447342 - 6447245
Alignment:
Q  89 taattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgcttttcttaatagtgt 186  Q
    |||||| ||||||||| |||| ||||||||||| |  |||||||||||| ||||||  ||| |||||||||||||||||||||||||| || ||||||    
T  6447342 taattctgtcactaaactttgagaccaaagaatctgcgaggaattttattttttccatcactaatttccctccctaattttgcttttcctagtagtgt 6447245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 90 - 175
Target Start/End: Complemental strand, 20762045 - 20761960
Alignment:
Q  90 aattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 175  Q
    ||||| ||||||||||||||||||||| |||||| ||||  ||||||| ||||||| ||| ||||||||||||| |||||||||||    
T  20762045 aattctgtcactaaattttgcgaccaaggaatttgtgagagattttattttttccgtcactaatttccctccctgattttgctttt 20761960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 55 - 187
Target Start/End: Complemental strand, 27182786 - 27182656
Alignment:
Q  55 gaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatt 154  Q
    |||||||||||| |||||||| |||||| || | ||||| ||||||||||| ||| |||||| | |||| ||||| ||||||| ||||  | ||| ||||    
T  27182786 gaaatttagtgagggaaaacaagaaatctctctctaatttcgtcactaaatcttgtgaccaagggatttgtgagggattttatttttt--gtcactaatt 27182689  T
Q  155 tccctccctaattttgcttttcttaatagtgta 187  Q
    |||||||||||||||| ||||| || |||||||    
T  27182688 tccctccctaattttgtttttcctagtagtgta 27182656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 63 - 155
Target Start/End: Original strand, 6718723 - 6718815
Alignment:
Q  63 gtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    |||| ||||||| |||||||||||| |||||||||||||||||||||||||||   ||||| |||||||||| || ||||||| ||| |||||    
T  6718723 gtgagggaaaacgtgaaatccctttctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 6718815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 20615482 - 20615344
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||||| |||||||||| |||||| ||| | |||||| |||| |||||||| |||||||| ||||| ||||  ||||||| |||||||    
T  20615482 ttagtgagggaaatttagagaaggaaaacgtgaaattcctctctaattctgtcattaaattttacgaccaaaaaatttgtgagatattttattttttccg 20615383  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtgt 186  Q
     | | ||||| ||||| ||||||| |||||| |||||||||    
T  20615382 tctctaattttcctccttaatttt-cttttc-taatagtgt 20615344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 51 - 175
Target Start/End: Original strand, 46942488 - 46942612
Alignment:
Q  51 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 150  Q
    ||||||| ||||| || ||||||| |||||||||| | |||||| |||||||||||||||||||||  || || ||||| |||| || ||||| | |||     
T  46942488 gagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaagaaaattgtgagggatttaattttttctgtcact 46942587  T
Q  151 aatttccctccctaattttgctttt 175  Q
    ||||||| |||||||||||| ||||    
T  46942588 aatttccttccctaattttgatttt 46942612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 46 - 185
Target Start/End: Original strand, 8543465 - 8543603
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | ||||||||||| |||||||||||||||   || || | |||||||| || ||||||     
T  8543465 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcattaaattttgcgaccatgaaacttgttaggaatttcat-ttttcca 8543563  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtg 185  Q
     ||| |||||||||| ||||||||| ||||  ||||||||    
T  8543564 tcactaatttccctcgctaattttgttttttctaatagtg 8543603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 46 - 185
Target Start/End: Original strand, 31433733 - 31433872
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||| |||||  | ||||||| |||||| ||| | |||||||||||||||||||| ||||||| |||||| |||| |||||||| |||||      
T  31433733 ttagtgagggaattttagaaagggaaaacgtgaaattcctctctaattccgtcactaaattttacgaccaaggaatttgtgagaaattttattttttcta 31433832  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtg 185  Q
     ||| |||||||||  |||||||| ||||| ||| |||||    
T  31433833 tcactaatttccctatctaattttactttttttagtagtg 31433872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 18380020 - 18380149
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||| ||| ||||||  | |||||||| | |||||||||||||||||||| ||| |||  ||||| ||| |||||| || |||||||    
T  18380020 ttagtgagggaaatttaatgagggaaaatgtaaaatccctctttaattccgtcactaaattttacgatcaagaaatttgtgaagaatttcattttttccg 18380119  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     |||  ||||||||| |||||||| |||||    
T  18380120 tcactgatttccctcgctaattttactttt 18380149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 29451090 - 29451219
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||| |||||||||||| ||||||| | |||||||| | |||||||||| | ||||||||| ||  | ||||||||||| ||||| || |||||||    
T  29451090 ttagcgagagaaatttagtgagggaaaacgtaaaatccctctctaattccgtcccaaaattttgcaactgaggaatttatgagaaatttcattttttccg 29451189  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| ||||||||||  |||||||| ||||    
T  29451190 tcactaatttccctcgttaattttgttttt 29451219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 6088353 - 6088238
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||| | |||||| | | ||||||||| | ||||||||| |||||| |||||| |||||||||| || ||||||| ||| |||||||||    
T  6088353 ttagtgagggaaaacgtaaaatccatctctaattccgttattaaattttgtgaccaaggaatttctgaggaatttcattttttccgtcactaatttccct 6088254  T
Q  160 ccctaattttgctttt 175  Q
      || |||||||||||    
T  6088253 tacttattttgctttt 6088238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 21490159 - 21490044
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||  | |||||||| | |||||| ||||||||||||||||||||| |||||| |||| ||||| || ||||||| ||   ||||||||    
T  21490159 ttagtgagggaaaatgtaaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcattgatttccct 21490060  T
Q  160 ccctaattttgctttt 175  Q
    | ||||||||| ||||    
T  21490059 cactaattttgttttt 21490044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 56 - 175
Target Start/End: Complemental strand, 47263394 - 47263275
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||||||| ||||||| | ||||  || | ||| || ||||||||||||||||||||| |||||| |||||||||| || ||||| | ||| |||||    
T  47263394 aaatttagtgagggaaaacgtaaaatttctatctaactctgtcactaaattttgcgaccaaggaatttgtgaggaatttaattttttctgtcaccaattt 47263295  T
Q  156 ccctccctaattttgctttt 175  Q
    || ||  |||||||||||||    
T  47263294 ccttcgttaattttgctttt 47263275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 133
Target Start/End: Complemental strand, 10772183 - 10772106
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaatt 133  Q
    ||||||||||| |||||| ||||||||||| | ||||| ||||| ||||||||||||| ||| ||||| ||| |||||    
T  10772183 aaatttagtgagggaaaatatgaaatccctctctaatttcgtcattaaattttgcgactaaaaaatttgtgaagaatt 10772106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 60 - 155
Target Start/End: Original strand, 50240756 - 50240851
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||| ||| ||||||||||| || | |||||  || ||||||||||||| |||| |||||||||||  ||||||| ||||||| ||| |||||    
T  50240756 ttagtgagggataacatgaaatctctctctaattatgttactaaattttgcgtccaaggaatttatgagagattttattttttccgtcactaattt 50240851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 134
Target Start/End: Complemental strand, 23233288 - 23233214
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattt 134  Q
    ||||||| ||||||| |||||| ||| |  |||||| |||||||||||||||||||||| |||| |||| |||||    
T  23233288 ttagtgagggaaaacgtgaaattcctctcaaattccttcactaaattttgcgaccaaagtatttgtgagaaattt 23233214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 174
Target Start/End: Original strand, 45304340 - 45304458
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||||||| | |||| |||||||  ||||  |||||||||| |||||||||  || |||||| || | ||||||||||| ||||||| ||  |||||    
T  45304340 aaatttagtgaggaaaaatatgaaatttcttttaaattccgtcattaaattttgtaactaaagaaattgttaggaattttattttttccgtcattaattt 45304439  T
Q  156 ccctccctaattttgcttt 174  Q
    | |||| | ||||||||||    
T  45304440 ctctccttgattttgcttt 45304458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 68 - 117
Target Start/End: Complemental strand, 27711285 - 27711236
Alignment:
Q  68 ggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaa 117  Q
    ||||||||||||||  || | |||||||||||||||||||||||||||||    
T  27711285 ggaaaacatgaaatttctctctaattccgtcactaaattttgcgaccaaa 27711236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 175
Target Start/End: Complemental strand, 26963383 - 26963259
Alignment:
Q  51 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 150  Q
    |||||||||||||||| ||||||  | |||| ||| | ||||||||| |||||||||| | ||||||| |||| | |  ||||| || |||| || |||     
T  26963383 gagggaaatttagtgagggaaaatgtaaaattcctctctaattccgttactaaattttacaaccaaagtatttgtaaaaaatttcattttttacgtcact 26963284  T
Q  151 aatttccctccctaattttgctttt 175  Q
    ||||||||||  |||||||| ||||    
T  26963283 aatttccctcgttaattttgttttt 26963259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 23233219 - 23233182
Alignment:
Q  150 aaatttccctccctaattttgcttttcttaatagtgta 187  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  23233219 aaatttccctccctaattttgctttttctaatagtgta 23233182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 105
Target Start/End: Complemental strand, 35579654 - 35579605
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaat 105  Q
    ||||||||||| ||||||| | |||||||| | |||||||||||||||||    
T  35579654 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaat 35579605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 103; Significance: 4e-51; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 46 - 188
Target Start/End: Complemental strand, 74680 - 74538
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  74680 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaattttatgttttccg 74581  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtgtaa 188  Q
     ||||||||||||||||||||||| |||||| || ||||||||    
T  74580 tcacaaatttccctccctaattttacttttcctagtagtgtaa 74538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 102; Significance: 1e-50; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 17824755 - 17824626
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  17824755 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaattttatgttttccg 17824656  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     |||||||||||||| ||||||||||||||    
T  17824655 tcacaaatttccctctctaattttgctttt 17824626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 17104004 - 17103875
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  17104004 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaattttatgttttccg 17103905  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     |||||||||| ||| ||||||||| ||||    
T  17103904 tcacaaatttctctctctaattttgttttt 17103875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 46 - 188
Target Start/End: Complemental strand, 18844683 - 18844541
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||||||||||||||||||||||||||| | |||||  || | ||||||||||||||||| ||||| ||||||||||||||||||||     
T  18844683 ttagtgagggaaatttagtgaaggaaaacatgaaatccctctctaattttgttattaaattttgcgaccaaaaaatttgtgaggaattttatgttttcca 18844584  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtgtaa 188  Q
     |||||||| || |||||||||||||||||| || ||||||||    
T  18844583 tcacaaattaccatccctaattttgcttttcctagtagtgtaa 18844541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 8555443 - 8555314
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| ||||||||| ||||| || | ||||||||||||||||||||||||||||||||||| |||||||||| || |||||||    
T  8555443 ttagtgagggaaatttagtgagggaaaacataaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccg 8555344  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  8555343 tcactaatttccctcgctaattttgctttt 8555314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 3823131 - 3823271
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| ||||||| | |||||||| | ||||||||||||||||||||||||||||||||||| |||| ||||| || |||||||    
T  3823131 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagaaatttcattttttccg 3823230  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtgt 186  Q
     ||| |||||||||| ||||||||||||||  |||||||||    
T  3823231 tcactaatttccctcgctaattttgctttttctaatagtgt 3823271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 58 - 190
Target Start/End: Original strand, 27869248 - 27869380
Alignment:
Q  58 atttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttcc 157  Q
    ||||||||| ||||||||||||||| || | ||||||||||||||||||||||||||||||||||| |||||||||| || ||||||  ||| |||||||    
T  27869248 atttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccatcactaatttcc 27869347  T
Q  158 ctccctaattttgcttttcttaatagtgtaata 190  Q
    ||| ||||||||||||||  || ||||||||||    
T  27869348 ctcgctaattttgctttttctagtagtgtaata 27869380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 60 - 175
Target Start/End: Original strand, 10917839 - 10917954
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| | |||||||| ||||||| | |||||||||||||||||||||| | |||  ||||||||||||||||||||||||||| |||||||||||||    
T  10917839 ttagtgaggaaaaacatgcaatccctctctaattccgtcactaaattttgcaatcaagaaatttatgaggaattttatgttttccgtcacaaatttccct 10917938  T
Q  160 ccctaattttgctttt 175  Q
    ||||||||||||||||    
T  10917939 ccctaattttgctttt 10917954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 46 - 176
Target Start/End: Original strand, 37992097 - 37992227
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||| ||||||||||| ||||||||||||||| || | ||||||||||||||||||||||||| ||||||| | ||| | |||||||||||||||    
T  37992097 ttagtgaggaaaatttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaagaatatgtgaaggattttatgttttccg 37992196  T
Q  146 acacaaatttccctccctaattttgcttttc 176  Q
     ||| ||||| ||||||||||||||||||||    
T  37992197 tcactaattttcctccctaattttgcttttc 37992227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 24576163 - 24576034
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| |||||| || ||||||||||||||| || | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  24576163 ttagtgagggatatttagcgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 24576064  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  24576063 tcactaatttccctcgctaattttgctttt 24576034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 33652565 - 33652694
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||||||| |||||||||||||||| | | ||| |||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  33652565 ttagtgagggatatttagtgagggaaaacatgaaatccttctctaactccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 33652664  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  33652665 tcactaatttccctcgctaattttgctttt 33652694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 4330976 - 4331105
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||| |||||| ||| | |||||||||||||||||||||||||||  |||||| |||||||||| || |||||||    
T  4330976 ttagtgagggaaattttgtgagggaaaacgtgaaattcctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccg 4331075  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  4331076 tcactaatttccctcgctaattttgctttt 4331105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 17810296 - 17810425
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||||||| |||||||||||||||||| | ||||| ||||||||||||||||||||||  ||||| |||||||||| || |||||||    
T  17810296 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccg 17810395  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| ||||| |||| ||||||||||||||    
T  17810396 tcactaattttcctcgctaattttgctttt 17810425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 18010199 - 18010070
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||| ||| |||||||||||||||||| | |||||||||||||||||||||||| ||| |||||| |||||||||| || |||||||    
T  18010199 ttagtgagggatatttattgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttccg 18010100  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||| ||| ||||||||||||||    
T  18010099 tcactaatttctctcgctaattttgctttt 18010070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 19240865 - 19240994
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||| | |||| ||| | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  19240865 ttagtgagggaaattttgtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 19240964  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  19240965 tcactaatttccctcgctaattttgctttt 19240994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 19314049 - 19314178
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||| | |||| ||| | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  19314049 ttagtgagggaaattttgtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 19314148  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  19314149 tcactaatttccctcgctaattttgctttt 19314178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 27910903 - 27910774
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||| ||| |||||||||||||||||| | ||||||||||||||||||||| ||| || |||||| |||||||||| || |||||||    
T  27910903 ttagtgagggatatttactgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgactaaggaatttgtgaggaatttcattttttccg 27910804  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  27910803 tcactaatttccctcgctaattttgctttt 27910774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 27957322 - 27957193
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||| ||| |||||||||||||||||| | ||||||||||||||||||||| ||| || |||||| |||||||||| || |||||||    
T  27957322 ttagtgagggatatttactgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgactaaggaatttgtgaggaatttcattttttccg 27957223  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  27957222 tcactaatttccctcgctaattttgctttt 27957193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 8789881 - 8789977
Alignment:
Q  89 taattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgcttttcttaatagtg 185  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||| || |||||    
T  8789881 taattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttcagtcacaaattttcctccctaattttgcttttcctagtagtg 8789977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 56 - 175
Target Start/End: Original strand, 11938753 - 11938871
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||||||| ||||||| | |||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || ||||||| ||| |||||    
T  11938753 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcat-ttttccgtcactaattt 11938851  T
Q  156 ccctccctaattttgctttt 175  Q
    ||||| ||||||||||||||    
T  11938852 ccctcgctaattttgctttt 11938871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 56 - 175
Target Start/End: Original strand, 19256220 - 19256339
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||||||| ||||||| | |||||||| | ||||||||||||||||||||||||||||  ||||| ||||||||||||| ||||||| ||| |||||    
T  19256220 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttattttttccgtcactaattt 19256319  T
Q  156 ccctccctaattttgctttt 175  Q
    |||||  |||||||||||||    
T  19256320 ccctcgttaattttgctttt 19256339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 19488186 - 19488071
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| |||||| ||||||| ||| | |||||||||||||||||||||||||||| |||||| |||||||||| || ||||||| ||| |||||||||    
T  19488186 ttagtgagggaaaatatgaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 19488087  T
Q  160 ccctaattttgctttt 175  Q
    | ||||||||||||||    
T  19488086 cgctaattttgctttt 19488071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 60 - 175
Target Start/End: Original strand, 32247921 - 32248036
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||| |||||||||| | ||||||||||||||||||||||||||| ||||||| |||||||||| || ||||||| ||| |||||||||    
T  32247921 ttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatagaatttgtgaggaatttcattttttccgtcactaatttccct 32248020  T
Q  160 ccctaattttgctttt 175  Q
    |  |||||||||||||    
T  32248021 cgttaattttgctttt 32248036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 58 - 175
Target Start/End: Original strand, 22939323 - 22939440
Alignment:
Q  58 atttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttcc 157  Q
    ||||||||| ||||||||||||||| || | ||||||||||||||||||||||||| || |||||| |||||||||| || ||||||| ||| |||||||    
T  22939323 atttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgacaaaggaatttgtgaggaatttcattttttccgtcactaatttcc 22939422  T
Q  158 ctccctaattttgctttt 175  Q
     || ||||||||||||||    
T  22939423 ttcactaattttgctttt 22939440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 24193335 - 24193206
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||| ||||||| |||| ||||||||||||||| || | |||||||||||||||||||||||||||   ||||| |||||||||| || |||||||    
T  24193335 ttagtgagagaaattttgtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccg 24193236  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  24193235 tcactaatttccctcgctaattttgctttt 24193206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 43431698 - 43431569
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| ||||||| | |||||||| | ||||| |||||||||||||||| ||||| |||||| |||||||||| || |||||||    
T  43431698 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaatttcgtcactaaattttgcaaccaaggaatttgtgaggaatttcattttttccg 43431599  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| |||||||| |||||    
T  43431598 tcactaatttccctcactaatttttctttt 43431569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 46 - 185
Target Start/End: Complemental strand, 6816522 - 6816383
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||||||| |||||||||||||||||| | |||||||| ||||||||||||| ||||| |||||| |||| |||||||| |||| |     
T  6816522 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgccactaaattttgcaaccaaggaatttgtgagaaattttatttttttca 6816423  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtg 185  Q
     ||| |||||||||| |||||| |||||||| || |||||    
T  6816422 tcactaatttccctcgctaattatgcttttcctagtagtg 6816383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 13061056 - 13060941
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| |||||||||||||||||| | |||||| |||||||||||||||||| || |||||| |||||||||| || ||||||| ||| ||||| |||    
T  13061056 ttagtgagggaaaacatgaaatccctctctaattctgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaatttacct 13060957  T
Q  160 ccctaattttgctttt 175  Q
    | ||||||||||||||    
T  13060956 cgctaattttgctttt 13060941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 56 - 175
Target Start/End: Complemental strand, 30467083 - 30466964
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||||||| ||||||| | ||||| || | ||||||| ||||||||||||||||||||  ||||||||||||||||||  ||||||| ||| |||||    
T  30467083 aaatttagtgagggaaaacgtaaaatctctctctaattccatcactaaattttgcgaccaagaaatttatgaggaattttaatttttccgtcactaattt 30466984  T
Q  156 ccctccctaattttgctttt 175  Q
    ||||| ||||||||||||||    
T  30466983 ccctcgctaattttgctttt 30466964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 56 - 175
Target Start/End: Original strand, 30687944 - 30688063
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||||||||||||||  | |||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || ||||| | |||  ||||    
T  30687944 aaatttagtgaaggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttcggtcactgattt 30688043  T
Q  156 ccctccctaattttgctttt 175  Q
    ||||| ||||||||||||||    
T  30688044 ccctcgctaattttgctttt 30688063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 21350476 - 21350605
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| | ||||| | |||||| | | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  21350476 ttagtgagggaaatttagtgaggaaaaacgtaaaatccatctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 21350575  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||  || |||||||||||    
T  21350576 tcactaatttcccttgcttattttgctttt 21350605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 60 - 164
Target Start/End: Complemental strand, 26399132 - 26399028
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||| |||||||||| | |||||||||||||||||||||||||||| |||||| ||||  ||||||| ||||||| ||| |||||||||    
T  26399132 ttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaacgaatttgtgagagattttattttttccgtcactaatttccct 26399033  T
Q  160 cccta 164  Q
    |||||    
T  26399032 cccta 26399028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 29350921 - 29351051
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttc-c 144  Q
    |||| |||||| ||||||||| |||||||||||||||||| | ||||| |||||||||||||||||||||   ||||| |||||||||| || |||||      
T  29350921 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattgcgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttcta 29351020  T
Q  145 gacacaaatttccctccctaattttgctttt 175  Q
    | ||| |||||||||| ||||||||||||||    
T  29351021 gtcactaatttccctcgctaattttgctttt 29351051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 16062078 - 16061949
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||  ||| | ||||| ||||||| || | |||||||||||||| |||||||||||| ||||||| |||||||||| || |||||||    
T  16062078 ttagtgagggaaattttttgaggaaaaacgtgaaatcactctctaattccgtcactacattttgcgaccatagaatttgtgaggaatttcattttttccg 16061979  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| |||||||| |||||    
T  16061978 tcactaatttccctcgctaattttactttt 16061949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 56 - 160
Target Start/End: Complemental strand, 5670298 - 5670194
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||||||| ||||||| | |||||||| | |||||||||||||||||||||||||||| |||||| |||||||||  || ||||||| ||| |||||    
T  5670298 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattccattttttccgtcactaattt 5670199  T
Q  156 ccctc 160  Q
    |||||    
T  5670198 ccctc 5670194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 56 - 172
Target Start/End: Original strand, 24636660 - 24636776
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||||||| ||||||| | |||||||| | |||||||||||||||||||||||| |||  ||||| |||||||||| || ||||||| ||| |||||    
T  24636660 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcattttttccgtcactaattt 24636759  T
Q  156 ccctccctaattttgct 172  Q
    |||||  ||||||||||    
T  24636760 ccctcgttaattttgct 24636776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 63 - 175
Target Start/End: Complemental strand, 25655980 - 25655868
Alignment:
Q  63 gtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccc 162  Q
    |||| ||||||| |||||||||| | ||||||  |||||||||||||||||||  |||||| |||||||||| || ||||||| ||| |||||||||| |    
T  25655980 gtgagggaaaacgtgaaatccctctctaattctatcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaatttccctcac 25655881  T
Q  163 taattttgctttt 175  Q
    |||||||||||||    
T  25655880 taattttgctttt 25655868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 32961657 - 32961797
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| ||||||  | |||| ||| | |||||||||||||||| |||||||||||  ||||| |||||||||| || ||||| |    
T  32961657 ttagtgagggaaatttagtgagggaaaatgtaaaattcctctctaattccgtcactaaactttgcgaccaagaaatttgtgaggaatttcattttttctg 32961756  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtgt 186  Q
     |||  ||||||||| |||||||||||||| ||| ||||||    
T  32961757 tcactgatttccctcgctaattttgctttttttagtagtgt 32961797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 23752411 - 23752284
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||  | ||||| || | |||||||||||||||||||||||||||| |||||| |||| ||||| || ||||||| ||| ||| |||||    
T  23752411 ttagtgagggaaaatgtaaaatcactctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaatatccct 23752312  T
Q  160 ccctaattttgcttttcttaatagtgta 187  Q
    | ||||||||||||||  ||||||||||    
T  23752311 cgctaattttgctttttctaatagtgta 23752284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 9631401 - 9631531
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattcc-gtcactaaattttgcgaccaaagaatttatgaggaattttatgttttcc 144  Q
    |||| ||||||||||| |||||||||||| ||||||  || | ||||||| |||||||||||||||||  | ||||||| ||||||||||||| ||||||    
T  9631401 ttagcgagggaaattttgtgaaggaaaacgtgaaatttctctctaattcccgtcactaaattttgcgagtatagaatttgtgaggaattttattttttcc 9631500  T
Q  145 gacacaaatttccctccctaattttgctttt 175  Q
    | ||| ||||| |||  ||||||||||||||    
T  9631501 gtcactaattttccttgctaattttgctttt 9631531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 4647894 - 4647765
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||| ||||||| |||| ||||||  |||||||||| | ||||||||||||||||||||||||| |   ||||| |||||||||| || |||||||    
T  4647894 ttagtgagagaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgcgactatgaaatttgtgaggaatttcattttttccg 4647795  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||| ||||    
T  4647794 tcactaatttccctcgctaattttgttttt 4647765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 9915179 - 9915051
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||| | ||||||||||||||||| ||  |||||| |||||||||| || |||||||    
T  9915179 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaatcctgtcactaaattttgcga-catggaatttgtgaggaatttcattttttccg 9915081  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||| ||| ||||||||||||||    
T  9915080 tcactaatttctctcgctaattttgctttt 9915051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 51 - 175
Target Start/End: Original strand, 29345074 - 29345198
Alignment:
Q  51 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 150  Q
    ||||||||||||| || ||||||| ||||||||||   |||||||||||||||||||||| || ||  ||||| |||   ||||||| ||||||| |||     
T  29345074 gagggaaatttagagagggaaaacgtgaaatccctccctaattccgtcactaaattttgccactaagaaatttgtgaaagattttattttttccgtcact 29345173  T
Q  151 aatttccctccctaattttgctttt 175  Q
    ||||||||||||||||||| |||||    
T  29345174 aatttccctccctaatttttctttt 29345198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 56 - 175
Target Start/End: Complemental strand, 25000560 - 25000441
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||||||| ||||||| | | |||||| | |||||||||||| ||||| |||||| || |||||| |||||||||| || ||||||| ||| |||||    
T  25000560 aaatttagtgagggaaaacgtaacatccctctctaattccgtcacaaaattctgcgactaaggaatttgtgaggaatttcattttttccgtcactaattt 25000461  T
Q  156 ccctccctaattttgctttt 175  Q
    ||||| |||||||| |||||    
T  25000460 ccctcactaattttactttt 25000441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 25273452 - 25273338
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||| | |||||||| | |||||| |||||||||||||||||||||||||||| |||||| ||| || |||| || ||| |||||||||    
T  25273452 ttagtgagggaaaacgtaaaatccctctctaattctgtcactaaattttgcgaccaaagaatttgtgaggactttcat-tttttcgtcactaatttccct 25273354  T
Q  160 ccctaattttgctttt 175  Q
    |  |||||||||||||    
T  25273353 cgttaattttgctttt 25273338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 46 - 169
Target Start/End: Complemental strand, 40289559 - 40289437
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| ||||||| | ||||||||   |||||||||||||||||||||||||||| |||||| |||| || || || |||||||    
T  40289559 ttagtgagggaaatttagtgagggaaaacgtaaaatccctcc-taattccgtcactaaattttgcgaccaaggaatttgtgagaaaattcattttttccg 40289461  T
Q  146 acacaaatttccctccctaatttt 169  Q
     ||| ||||| |||| ||||||||    
T  40289460 tcactaattttcctcgctaatttt 40289437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 60 - 145
Target Start/End: Complemental strand, 19493781 - 19493695
Alignment:
Q  60 ttagtgaaggaaaacatgaaa-tccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    ||||||| ||||||||| ||| ||||| | ||||||||||||||||||||||||||||||||||| |||||||||| || |||||||    
T  19493781 ttagtgagggaaaacataaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccg 19493695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 6817052 - 6817181
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| ||||||  | ||||| || | ||||||||||||||||||||| ||||||  ||||| |||||||||| || |||||||    
T  6817052 ttagtgagggaaatttagtgagggaaaatgtaaaatctctctctaattccgtcactaaattttgtgaccaagaaatttgtgaggaatttcattttttccg 6817151  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     |||  |||| |||  ||||||||||||||    
T  6817152 tcactgattttccttgctaattttgctttt 6817181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 78 - 175
Target Start/End: Original strand, 8824855 - 8824952
Alignment:
Q  78 aaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 175  Q
    |||||||| | ||||||||||||||||||||||||| || |||| | |||||||||| || ||||||  ||| |||||||||| ||||||||||||||    
T  8824855 aaatccctctctaattccgtcactaaattttgcgactaaggaatctgtgaggaatttgattttttccatcactaatttccctcgctaattttgctttt 8824952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 54 - 175
Target Start/End: Original strand, 15251608 - 15251728
Alignment:
Q  54 ggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaat 153  Q
    |||||||||  || ||||||| |||||||| | | |||||| |||||||||||||||||||||| |||   ||||  ||||||| ||||||| ||| |||    
T  15251608 ggaaatttaaagagggaaaacgtgaaatccttctctaattctgtcactaaattttgcgaccaaaaaatcg-tgagagattttattttttccgtcactaat 15251706  T
Q  154 ttccctccctaattttgctttt 175  Q
    ||||||||||||||||||||||    
T  15251707 ttccctccctaattttgctttt 15251728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 67 - 175
Target Start/End: Complemental strand, 21219358 - 21219250
Alignment:
Q  67 aggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaat 166  Q
    ||||| || |||||||||| | ||||||| ||||||||||||||||||||| |||||||||| ||||| || ||||||| ||| |||||| ||| || ||    
T  21219358 aggaatacgtgaaatccctctctaattccatcactaaattttgcgaccaaaaaatttatgagtaatttcattttttccgtcactaatttctctcgctgat 21219259  T
Q  167 tttgctttt 175  Q
    ||| |||||    
T  21219258 ttttctttt 21219250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 46 - 145
Target Start/End: Original strand, 5879202 - 5879301
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| | ||||| | |||| ||| | |||||||||||||||||||| |||||||  ||||| ||||||||||||| |||||||    
T  5879202 ttagtgagggaaatttagtgaggaaaaacgtaaaatgcctctctaattccgtcactaaattttacgaccaagaaatttgtgaggaattttattttttccg 5879301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 46 - 185
Target Start/End: Complemental strand, 31344311 - 31344172
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||| ||||| || ||||||  |||||| ||| | ||||||||||| |||||||||||| |||  |||||||||| ||||| || ||||||     
T  31344311 ttagtgagggaattttagagagggaaaatgtgaaattcctctctaattccgtcattaaattttgcgatcaagaaatttatgagaaatttgattttttcca 31344212  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtg 185  Q
     ||| ||||||| || |||||||| ||||||||| |||||    
T  31344211 tcactaatttccttctctaattttacttttcttagtagtg 31344172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 31399633 - 31399518
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||| |||||||| | | |||||||||||||||||||||||||||  |||||| |||||||||| || |||| |  ||| |||||||||    
T  31399633 ttagtgagggaaaacgtgaaatccatctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcatttttttcatcactaatttccct 31399534  T
Q  160 ccctaattttgctttt 175  Q
    |  |||||||| ||||    
T  31399533 cgttaattttgttttt 31399518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 96 - 189
Target Start/End: Original strand, 17003310 - 17003403
Alignment:
Q  96 gtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgcttttcttaatagtgtaat 189  Q
    |||| ||||||||| || ||| ||||||||||||  |||||| |||||| |||| ||||| |||||||||||||||||||  || |||||||||    
T  17003310 gtcattaaattttgtgatcaaggaatttatgaggggttttattttttcccacactaattttcctccctaattttgctttttctagtagtgtaat 17003403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 105 - 175
Target Start/End: Original strand, 25274654 - 25274724
Alignment:
Q  105 ttttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 175  Q
    |||||||||||| |||||| |||| ||||| || ||||||| ||| |||||||||| ||||||||||||||    
T  25274654 ttttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaatttccctcgctaattttgctttt 25274724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 60 - 169
Target Start/End: Complemental strand, 33413095 - 33412992
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||| | |||||||| | |||||||||||||||||||||||      |||||| |||||||||| || |||||||  || |||||||||    
T  33413095 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcg------gaatttgtgaggaatttcattttttccgttactaatttccct 33413002  T
Q  160 ccctaatttt 169  Q
    | ||||||||    
T  33413001 cgctaatttt 33412992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 2265474 - 2265388
Alignment:
Q  89 taattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgcttttc 176  Q
    |||||| |||||||||||||| || |||||||||| ||| | ||||||| ||||||| ||| ||||| | ||||||||||| ||||||    
T  2265474 taattctgtcactaaattttgtgatcaaagaatttgtgaaggattttattttttccgtcactaattt-cgtccctaattttacttttc 2265388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 89 - 175
Target Start/End: Complemental strand, 6084340 - 6084256
Alignment:
Q  89 taattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 175  Q
    ||||||||||||||||||||  |||||| ||||||  |||  ||||||| ||||||| ||| |||||  ||||||||||||||||||    
T  6084340 taattccgtcactaaatttttagaccaaggaatttgggag--attttattttttccgtcactaatttatctccctaattttgctttt 6084256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 60 - 155
Target Start/End: Complemental strand, 41527825 - 41527730
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||| ||| ||||||||||| ||   |||||  || |||||||||||||| ||| |||||||||||| ||||||| ||||||| ||| |||||    
T  41527825 ttagtgagggataacatgaaatctctccctaattatgttactaaattttgcgatcaaggaatttatgagggattttattttttccgtcactaattt 41527730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 42700743 - 42700667
Alignment:
Q  99 actaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 175  Q
    ||||||||||||||| || |||||| |||||||||| || ||||||| |||  |||| |||| |||||||| |||||    
T  42700743 actaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactgattttcctcgctaattttactttt 42700667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 142
Target Start/End: Complemental strand, 3692310 - 3692214
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgtttt 142  Q
    |||| ||||||||||||  || | ||||| | |||||| | | ||||||| | ||||||||||  ||| ||||||||| ||||||||||||| ||||    
T  3692310 ttagtgagggaaatttatagaggtaaaacgtaaaatccttctctaattccattactaaattttatgactaaagaatttgtgaggaattttatttttt 3692214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 137
Target Start/End: Original strand, 15289683 - 15289731
Alignment:
Q  89 taattccgtcactaaattttgcgaccaaagaatttatgaggaattttat 137  Q
    ||||||| |||||||||||| |||||||||||||| ||||  |||||||    
T  15289683 taattccatcactaaattttacgaccaaagaatttgtgagagattttat 15289731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 137
Target Start/End: Original strand, 15470052 - 15470100
Alignment:
Q  89 taattccgtcactaaattttgcgaccaaagaatttatgaggaattttat 137  Q
    ||||||| |||||||||||| |||||||||||||| ||||  |||||||    
T  15470052 taattccatcactaaattttacgaccaaagaatttgtgagagattttat 15470100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 6e-50; HSPs: 78)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 22083838 - 22083978
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| |||||||||||||||||| | |||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||    
T  22083838 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcacaaaattttgcgaccaaggaatttgtgaggaattttatgttttccg 22083937  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtgt 186  Q
     |||||||||||||||||||||||||||||| || ||||||    
T  22083938 tcacaaatttccctccctaattttgcttttcctagtagtgt 22083978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 276 - 381
Target Start/End: Original strand, 3237241 - 3237347
Alignment:
Q  276 ccctaaatttaatatagtcaaatcccctttgttggttaaaa-aagttttagtctcttacttggtccactaaaaagggtattaaagtgtaaaacatgagct 374  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3237241 ccctaaatttaatatagtcaaatccactttgttggttaaaaaaagttttagtctcttacttggtccactaaaaagggtattaaagtgtaaaacatgagct 3237340  T
Q  375 agtagat 381  Q
    |||||||    
T  3237341 agtagat 3237347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 46 - 185
Target Start/End: Original strand, 12951708 - 12951847
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||||| |||||||||||||||| |||||| |||| ||||||||||||||||    
T  12951708 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgagaaattttatgttttccg 12951807  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtg 185  Q
     |||||||||||||| ||||||||||||||| || |||||    
T  12951808 tcacaaatttccctctctaattttgcttttcctagtagtg 12951847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 46 - 185
Target Start/End: Complemental strand, 18033664 - 18033526
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||| ||| |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| ||| ||||||    
T  18033664 ttagtgagggaaatttaatgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttaatg-tttccg 18033566  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtg 185  Q
     |||||||||||||||||||||||||||||| || |||||    
T  18033565 tcacaaatttccctccctaattttgcttttcctagtagtg 18033526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 46 - 187
Target Start/End: Original strand, 11530225 - 11530366
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||| ||||||||||| |||||||||||||||| | | |||||||||||||||||||| |||  ||  |||||||||| ||||||||||||||||    
T  11530225 ttagtgaggaaaatttagtgagggaaaacatgaaatccatctctaattccgtcactaaattttacgattaagaaatttatgagaaattttatgttttccg 11530324  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtgta 187  Q
     |||||||||||||||||||||||||||||| ||||||||||    
T  11530325 tcacaaatttccctccctaattttgcttttcctaatagtgta 11530366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 46 - 191
Target Start/End: Original strand, 28364911 - 28365056
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| ||||||| | |||||||| | ||||||||||||||||||||||||||||||||||| |||||||||| || |||||||    
T  28364911 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccg 28365010  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtgtaataa 191  Q
     ||| |||||||||| ||||||||||||||  || |||||||||||    
T  28365011 tcactaatttccctcgctaattttgctttttctagtagtgtaataa 28365056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 60 - 175
Target Start/End: Original strand, 11077663 - 11077778
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| |||||||||||||||||| | |||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||    
T  11077663 ttagtgagggaaaacatgaaatccctctctaataccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccct 11077762  T
Q  160 ccctaattttgctttt 175  Q
    |||||||||| |||||    
T  11077763 ccctaatttttctttt 11077778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 9892963 - 9893092
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| ||||||| |||||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  9892963 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 9893062  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  9893063 tcactaatttccctcgctaattttgctttt 9893092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 22579488 - 22579348
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | ||||||||||||||||||||||||||| ||||||| |||||||||| || |||||||    
T  22579488 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatagaatttgtgaggaatttcattttttccg 22579389  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtgt 186  Q
     ||| |||||||||| ||||||||||||||  |||||||||    
T  22579388 tcactaatttccctcgctaattttgctttttctaatagtgt 22579348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 46 - 185
Target Start/End: Original strand, 2992615 - 2992754
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||     
T  2992615 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttattttttcca 2992714  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtg 185  Q
     ||| |||||||||| |||||| |||||||| || |||||    
T  2992715 tcactaatttccctcgctaattatgcttttcctagtagtg 2992754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 60 - 176
Target Start/End: Original strand, 14872133 - 14872249
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| |||||||||||||||||| | |||||||||||||||||||||  ||||| |||||| ||||||||||||||||||||| |||||||||||||    
T  14872133 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttggaaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccct 14872232  T
Q  160 ccctaattttgcttttc 176  Q
    | |||||||| ||||||    
T  14872233 ctctaatttttcttttc 14872249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 46 - 187
Target Start/End: Original strand, 6978279 - 6978418
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| |||||||||  ||||||||||||| ||| | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  6978279 ttagtgagggatatttagtga--gaaaacatgaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 6978376  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtgta 187  Q
      || |||||||||| ||||||||||||||| ||||||||||    
T  6978377 taactaatttccctcgctaattttgcttttcctaatagtgta 6978418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 6598464 - 6598593
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||||||| ||||||| |||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||||| || |||||||    
T  6598464 ttagtgagggatatttagtgagggaaaacttgaaatccctctctaattccgtcactaaattttgcgaccaagtaatttgtgaggaatttcattttttccg 6598563  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  6598564 tcactaatttccctcgctaattttgctttt 6598593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 15364597 - 15364468
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| ||||||| | |||||| | | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  15364597 ttagtgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 15364498  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  15364497 tcactaatttccctcactaattttgctttt 15364468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 24661148 - 24661019
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||||||| ||||||||||||||| || | ||||||||||| |||||||||||||||| |||||| |||||||||| || |||||||    
T  24661148 ttagtgagggatatttagtgagggaaaacatgaaatctctctctaattccgtcattaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 24661049  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  24661048 tcactaatttccctcgctaattttgctttt 24661019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 25398002 - 25398131
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| ||||||| | |||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  25398002 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 25398101  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| |||||||| |||||    
T  25398102 tcactaatttccctcgctaatttttctttt 25398131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 26224428 - 26224557
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||||||| |||||||||||||||||| | ||||||||||||||||||||| ||||||  ||||| |||||||||| || |||||||    
T  26224428 ttagcgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgaccaagaaatttgtgaggaatttcattttttccg 26224527  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  26224528 tcactaatttccctcgctaattttgctttt 26224557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 495766 - 495637
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| ||||||| | ||||| || | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  495766 ttagtgagggaaatttagtgagggaaaacgtaaaatcactctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 495667  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||  ||||||||||||||    
T  495666 tcactaatttcccttgctaattttgctttt 495637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 12200694 - 12200823
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||||||| |||||| ||||||||||| | ||||||| |||||||||||| ||||||| |||||| |||||||||| || |||||||    
T  12200694 ttagtgagggatatttagtgagggaaaatatgaaatccctctctaattccctcactaaattttacgaccaaggaatttgtgaggaatttcattttttccg 12200793  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  12200794 tcactaatttccctcactaattttgctttt 12200823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 46 - 167
Target Start/End: Original strand, 12845003 - 12845124
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||| |||||||| || ||||||| ||||||| || | ||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||    
T  12845003 ttagtgaggaaaatttagagagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgagcaattttattttttccg 12845102  T
Q  146 acacaaatttccctccctaatt 167  Q
     ||| |||||||||||||||||    
T  12845103 tcactaatttccctccctaatt 12845124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 14886561 - 14886690
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||| ||||||||||| ||||||||| |||||||| | |||||||||||||||||||| |||||||||||| | ||||| ||||||| ||||| |    
T  14886561 ttagtgaggaaaatttagtgagggaaaacatcaaatccctctctaattccgtcactaaattttacgaccaaagaatatgtgagggattttattttttctg 14886660  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| ||||| |||||||||||||||||||    
T  14886661 tcactaattttcctccctaattttgctttt 14886690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 75 - 185
Target Start/End: Original strand, 14772690 - 14772800
Alignment:
Q  75 atgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgcttt 174  Q
    |||||||| || | |||||||||||||||||||| ||||||| |||||| |||||||||||||||||| || |||||||||| |||||||||||||||||    
T  14772690 atgaaatctctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaattttatgtttttcgtcacaaatttctctccctaattttgcttt 14772789  T
Q  175 tcttaatagtg 185  Q
    |  ||||||||    
T  14772790 ttctaatagtg 14772800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 1939381 - 1939252
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||| |||||  ||||||||||||||||| | ||||||||||| ||||||||||||||||| ||||| |||||||||| || ||||| |    
T  1939381 ttagtgagggatattcagtgagagaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaaaaatttgtgaggaatttcattttttcgg 1939282  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  1939281 tcactaatttccctcgctaattttgctttt 1939252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 58 - 175
Target Start/End: Complemental strand, 11049878 - 11049761
Alignment:
Q  58 atttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttcc 157  Q
    ||||||||| ||||||||||||||| || | |||||||||||||||||||||||||||| |||||| |||||||||| || ||||||| ||| |||||||    
T  11049878 atttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 11049779  T
Q  158 ctccctaattttgctttt 175  Q
    ||  ||||||||| ||||    
T  11049778 cttgctaattttgttttt 11049761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 27796973 - 27796844
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||||||| |||||||||||||||||| | |||||||||||||||||||||| | ||| ||||||||||| ||| | || |||| ||    
T  27796973 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaatcaaggaatttatgagaaatatcatttttttcg 27796874  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  27796873 tcactaatttccctcgctaattttgctttt 27796844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 5360431 - 5360538
Alignment:
Q  68 ggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaatt 167  Q
    ||||||| | ||||| || | ||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||| ||| |||||||||| ||||||    
T  5360431 ggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaaaaatttgtgaggaattttattttttccgtcactaatttccctcgctaatt 5360530  T
Q  168 ttgctttt 175  Q
    ||||||||    
T  5360531 ttgctttt 5360538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 46 - 185
Target Start/End: Original strand, 18048788 - 18048927
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| | ||||||||||||||||   ||||||  |||||||||||||||||||| |||||| |||| |||||||| |||||||    
T  18048788 ttagtgagggaaatttagtgaggaaaaacatgaaatccctccctaattctctcactaaattttgcgaccaacgaatttgtgagaaattttattttttccg 18048887  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtg 185  Q
     ||| ||||| |||| ||||||||| ||||| || |||||    
T  18048888 tcactaattttcctctctaattttgtttttcctagtagtg 18048927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 46 - 161
Target Start/End: Original strand, 23281786 - 23281901
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | ||||||||||||||||||||||||||| | ||||| ||||||||||||| ||||||     
T  23281786 ttagggagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccataaaatttgtgaggaattttattttttcca 23281885  T
Q  146 acacaaatttccctcc 161  Q
     ||| |||||||||||    
T  23281886 tcactaatttccctcc 23281901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 21140939 - 21141068
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||||||||||   |||||  ||||||||| || |||||||    
T  21140939 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgggaggaatttcattttttccg 21141038  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| ||||||||||  |||||||||||||    
T  21141039 tcactaatttccctcgttaattttgctttt 21141068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 58 - 170
Target Start/End: Complemental strand, 33250835 - 33250723
Alignment:
Q  58 atttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttcc 157  Q
    ||||||||| |||||||||||||| ||| | ||||||| |||||||||||||||||||| |||||| |||||||||| || ||||||| ||| |||||||    
T  33250835 atttagtgagggaaaacatgaaattcctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 33250736  T
Q  158 ctccctaattttg 170  Q
    |||  ||||||||    
T  33250735 ctcgttaattttg 33250723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 5192314 - 5192199
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||| | |||||||| | |||||||||||||||||||| |||||||||||||| |||||||||| || ||||||  ||| ||||| |||    
T  5192314 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcattttttccttcactaattttcct 5192215  T
Q  160 ccctaattttgctttt 175  Q
    | ||||||||||||||    
T  5192214 cgctaattttgctttt 5192199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 6605621 - 6605506
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||||||||||| || | |||||||||||||| |||||||||| ||  ||||| |||||||||| || ||||||| ||| |||||||||    
T  6605621 ttagtgagggaaaacatgaaatctctctctaattccgtcactatattttgcgactaagaaatttgtgaggaatttcattttttccgtcactaatttccct 6605522  T
Q  160 ccctaattttgctttt 175  Q
    | ||||||||||||||    
T  6605521 cgctaattttgctttt 6605506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 56 - 175
Target Start/End: Original strand, 9885253 - 9885372
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||||||| |||||||||||||||||| | |||||  ||||||||||||||| |||||  ||||| ||||  ||||||| ||||||| ||| |||||    
T  9885253 aaatttagtgagggaaaacatgaaatccctctttaattttgtcactaaattttgcaaccaacaaatttgtgagagattttattttttccgtcactaattt 9885352  T
Q  156 ccctccctaattttgctttt 175  Q
    |||||||| |||||||||||    
T  9885353 ccctccctgattttgctttt 9885372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 56 - 175
Target Start/End: Original strand, 15448395 - 15448514
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||||||| ||||||| | |||||||| | ||||||||||| ||||||||||||  || |||||| |||||||||| || ||||||| ||| |||||    
T  15448395 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgattaaggaatttgtgaggaatttcattttttccgtcactaattt 15448494  T
Q  156 ccctccctaattttgctttt 175  Q
    ||||| ||||||||||||||    
T  15448495 ccctcgctaattttgctttt 15448514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 2669309 - 2669438
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||  | ||||| | |||| ||| | |||||||||||||||||||||||||||| |||||| |||||||||| || |||| ||    
T  2669309 ttagtgagggaaatttagtgtggaaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttttcg 2669408  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| ||||||||||  |||||||||||||    
T  2669409 tcactaatttccctcgttaattttgctttt 2669438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 46 - 167
Target Start/End: Complemental strand, 12351725 - 12351604
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||||| || ||||||| ||||||  || | ||||||||||| ||||||||||||| || |||||| ||||||||||||| |||||||    
T  12351725 ttagtgagggaaatttagagagggaaaacgtgaaatttctctctaattccgtcattaaattttgcgactaaggaatttgtgaggaattttattttttccg 12351626  T
Q  146 acacaaatttccctccctaatt 167  Q
     ||| ||||||||||| |||||    
T  12351625 tcactaatttccctccttaatt 12351604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 20182145 - 20182274
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||| |||||| |||| ||||||| |||||||||| | |||||||||||||||||||||||| ||   ||||| |||||||||| || |||||||    
T  20182145 ttagtgaggcaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgatcatgaaatttgtgaggaatttcattttttccg 20182244  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| |||||||| |||||    
T  20182245 tcactaatttccctcgctaattttactttt 20182274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 21990313 - 21990185
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||| ||||||||||| ||||||| | |||||||| | ||||||||||||||| ||||||||||||  ||||| |||||||||| || |||||||    
T  21990313 ttagtgaggaaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaatttttgcgaccaagaaatttgtgaggaatttcat-ttttccg 21990215  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||  |||||||||| ||||||||||||||    
T  21990214 tcattaatttccctcgctaattttgctttt 21990185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 22153846 - 22153717
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||| |||||| |||| ||||||| |||||||||| | |||||||||||||||||||||||| ||   ||||| |||||||||| || |||||||    
T  22153846 ttagtgaggcaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgatcatgaaatttgtgaggaatttcattttttccg 22153747  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| |||||||| |||||    
T  22153746 tcactaatttccctcgctaattttactttt 22153717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 58 - 175
Target Start/End: Original strand, 26939599 - 26939716
Alignment:
Q  58 atttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttcc 157  Q
    ||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||||| || ||||  | ||| |||||||    
T  26939599 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttttgtcactaatttcc 26939698  T
Q  158 ctccctaattttgctttt 175  Q
    |||  ||||||| |||||    
T  26939699 ctcagtaattttactttt 26939716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 54 - 175
Target Start/End: Complemental strand, 30834091 - 30833970
Alignment:
Q  54 ggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaat 153  Q
    ||||||||||||| ||| ||| | |||||||| | |||||| |||| ||||||||||||||||| ||||  |||||||||| || ||||||| ||| |||    
T  30834091 ggaaatttagtgagggagaacgtaaaatccctctctaattctgtcattaaattttgcgaccaaaaaattagtgaggaatttcattttttccgtcactaat 30833992  T
Q  154 ttccctccctaattttgctttt 175  Q
    ||||||| ||||||||||||||    
T  30833991 ttccctcgctaattttgctttt 30833970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 60 - 176
Target Start/End: Original strand, 1954895 - 1955010
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    |||||||||||||||||||||||| | ||||||||| |||| |||||||| ||||||  ||||| ||| ||||||||| ||||||| |||  ||||||||    
T  1954895 ttagtgaaggaaaacatgaaatcc-tctataattccatcacaaaattttgtgaccaagaaatttgtgacgaattttattttttccgtcactcatttccct 1954993  T
Q  160 ccctaattttgcttttc 176  Q
     ||||||||||||||||    
T  1954994 tcctaattttgcttttc 1955010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 60 - 188
Target Start/End: Original strand, 6065451 - 6065579
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| |||||||| ||||| ||| | |||||  |||| |||||||||||| |||||||||| ||||  ||||||| ||||||| ||  ||||| |||    
T  6065451 ttagtgagggaaaacaagaaattcctctctaattttgtcattaaattttgcgatcaaagaatttgtgagagattttattttttccgtcattaattttcct 6065550  T
Q  160 ccctaattttgcttttcttaatagtgtaa 188  Q
    ||||||||||||||||| |||||||||||    
T  6065551 ccctaattttgcttttcctaatagtgtaa 6065579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 60 - 175
Target Start/End: Original strand, 12499230 - 12499345
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||| | |||||||| | ||| ||||||||||||||||||||||||| ||||| |||||||||| || ||||||| ||| | |||||||    
T  12499230 ttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactactttccct 12499329  T
Q  160 ccctaattttgctttt 175  Q
    | ||||||||| ||||    
T  12499330 cgctaattttgttttt 12499345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 60 - 175
Target Start/End: Original strand, 12506559 - 12506674
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||| | |||||||| | ||| ||||||||||||||||||||||||| ||||| |||||||||| || ||||||| ||| | |||||||    
T  12506559 ttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactactttccct 12506658  T
Q  160 ccctaattttgctttt 175  Q
    | ||||||||| ||||    
T  12506659 cgctaattttgttttt 12506674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 12509671 - 12509556
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||| | |||||||| | ||| ||||||||||||||||||||||||| ||||| |||||||||| || ||||||| ||| | |||||||    
T  12509671 ttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactactttccct 12509572  T
Q  160 ccctaattttgctttt 175  Q
    | ||||||||| ||||    
T  12509571 cgctaattttgttttt 12509556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 46 - 145
Target Start/End: Original strand, 27705422 - 27705521
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||||||||||  |||||| |||||||||| || |||||||    
T  27705422 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccg 27705521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 46 - 176
Target Start/End: Complemental strand, 22055751 - 22055621
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||| |||||||| | |||||||||||||||| | ||||||| ||| | ||||||| |||||| |||||| ||||||||||||| ||||| |    
T  22055751 ttagtgagggaagtttagtgaggaaaaacatgaaatccctctctaattccctcattgaattttgtgaccaacgaatttgtgaggaattttattttttctg 22055652  T
Q  146 acacaaatttccctccctaattttgcttttc 176  Q
     ||  |||||||||| ||||||||| |||||    
T  22055651 tcattaatttccctctctaattttgtttttc 22055621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 78 - 175
Target Start/End: Original strand, 28668132 - 28668229
Alignment:
Q  78 aaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 175  Q
    |||||||||| ||||||||||| |||||||||||| ||| |||||| ||||||||||||| ||||||| |||  ||||||||| |||||||| |||||    
T  28668132 aaatccctttctaattccgtcattaaattttgcgatcaaggaatttgtgaggaattttattttttccgtcactgatttccctcgctaattttactttt 28668229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 60 - 145
Target Start/End: Original strand, 33547560 - 33547645
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    ||||||| |||||||||||||||||| | |||||  |||||||||||||||||||||||||||| ||||| ||||||| |||||||    
T  33547560 ttagtgagggaaaacatgaaatccctatctaattttgtcactaaattttgcgaccaaagaatttgtgagggattttattttttccg 33547645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 46 - 185
Target Start/End: Complemental strand, 21691635 - 21691495
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||| ||||| || | ||||| |||||||||| | ||||| ||||||||||||||||||||||||||||| |||| |||||||| |||| |     
T  21691635 ttagtgagggaattttagagaggaaaaacgtgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatttgtgagaaattttatttttttca 21691536  T
Q  146 acac-aaatttccctccctaattttgcttttcttaatagtg 185  Q
     ||| || |||||||| |||||||| ||||| ||| |||||    
T  21691535 tcactaattttccctctctaattttactttttttagtagtg 21691495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 60 - 176
Target Start/End: Original strand, 11350196 - 11350309
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||||| ||||| || | |||||| |||||||||||||||||  || |||||| |||    |||| ||||||||| |||||||||||||    
T  11350196 ttagtgagggaaaacataaaatcgctctctaattctgtcactaaattttgcgattaaggaatttgtgat---ttttttgttttccgtcacaaatttccct 11350292  T
Q  160 ccctaattttgcttttc 176  Q
    |||||||||||||||||    
T  11350293 ccctaattttgcttttc 11350309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 54 - 175
Target Start/End: Original strand, 9060099 - 9060219
Alignment:
Q  54 ggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaat 153  Q
    |||||||||| || ||||| ||||||||  || | |||||| |||||||||||||||||||||| ||||| ||||| ||||||| ||||||| ||| |||    
T  9060099 ggaaatttagcgagggaaa-catgaaatttctctctaattctgtcactaaattttgcgaccaaaaaatttgtgagggattttattttttccgtcactaat 9060197  T
Q  154 ttccctccctaattttgctttt 175  Q
    ||| |||  |||||||||||||    
T  9060198 ttcgctctttaattttgctttt 9060219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 58 - 175
Target Start/End: Complemental strand, 12160973 - 12160857
Alignment:
Q  58 atttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttcc 157  Q
    ||||||||| ||||||||| |||||||| | ||||| |||||||||||||| ||| |||| ||||| |||||||||| || |||| || ||| |||||||    
T  12160973 atttagtgagggaaaacataaaatccctctctaatttcgtcactaaatttt-cgatcaaaaaatttgtgaggaatttcattttttacgtcactaatttcc 12160875  T
Q  158 ctccctaattttgctttt 175  Q
    ||| |||||||| |||||    
T  12160874 ctcgctaattttactttt 12160857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 16250941 - 16250812
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||| ||||||| |||| ||||||| ||||||| || | |||||| ||||||||||||||||| ||   ||||| |||||||||| || |||||||    
T  16250941 ttagtgagagaaattttgtgagggaaaacgtgaaatctctctctaattctgtcactaaattttgcgatcatgaaatttgtgaggaatttcattttttccg 16250842  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| ||||||||||  |||||||||||||    
T  16250841 tcactaatttccctcgttaattttgctttt 16250812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 18492369 - 18492498
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||| ||||||| || | ||||||| |||||||||  | |||||||||||||||||||||||||||  |||||| |||| ||||| || |||||||    
T  18492369 ttagtgagagaaattttgtaagggaaaacgtgaaatcccactctaattccgtcactaaattttgcgaccatggaatttgtgagaaatttcattttttccg 18492468  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| ||||| | || ||||||||||||||    
T  18492469 tcactaatttgcatcgctaattttgctttt 18492498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 60 - 144
Target Start/End: Original strand, 13145016 - 13145100
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttcc 144  Q
    ||||||| ||||||| ||||||| || | |||||||||||||||||||||||||||| |||||| |||||||||| || ||||||    
T  13145016 ttagtgagggaaaacgtgaaatctctctttaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttcc 13145100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 76 - 175
Target Start/End: Original strand, 15509186 - 15509285
Alignment:
Q  76 tgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 175  Q
    |||||||||| | |||||||||||||||||||| ||||||   ||||| |||||||||| || ||||||| ||| |||||||||| |||||||| |||||    
T  15509186 tgaaatccctctctaattccgtcactaaattttccgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatttttctttt 15509285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 20692936 - 20692821
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||| | |||||||| | ||||| ||||||||||||||||||||||| || |||| | ||||||||| ||||||| ||| ||||| |||    
T  20692936 ttagtgagggaaaacgtaaaatccctctctaatttcgtcactaaattttgcgaccaaaaaacttataaagaattttattttttccgtcactaattttcct 20692837  T
Q  160 ccctaattttgctttt 175  Q
    |  |||||||| ||||    
T  20692836 cgttaattttgttttt 20692821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 89 - 175
Target Start/End: Complemental strand, 12157472 - 12157386
Alignment:
Q  89 taattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 175  Q
    ||||||||||||||||||||  ||||||||| ||| | ||| ||||||| ||||||| ||| ||||||||||| |||||||||||||    
T  12157472 taattccgtcactaaattttatgaccaaagattttgtaagggattttattttttccgtcactaatttccctccttaattttgctttt 12157386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 46 - 155
Target Start/End: Complemental strand, 343702 - 343593
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||| ||| ||||||| | |||||||| | |||||| ||||||||| |||||||||||| ||||| |||||||||| || |||| ||    
T  343702 ttagtgagggaaatttaatgagggaaaacgtaaaatccctctctaattctgtcactaaaatttgcgaccaaaaaatttgtgaggaatttcattttttacg 343603  T
Q  146 acacaaattt 155  Q
     ||| |||||    
T  343602 tcactaattt 343593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 12680323 - 12680195
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||| |||||||| || ||||||| |||||| ||| | ||||||||||| |||||||| ||| |||||||||  |||| |||||||| |||||||    
T  12680323 ttagtgaggaaaatttagagagggaaaacgtgaaattcctctctaattccgtcattaaattttacgatcaaagaattcgtgagcaattttattttttccg 12680224  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| ||||| ||||| ||||||| |||||    
T  12680223 tcactaattt-cctccttaatttttctttt 12680195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 78 - 175
Target Start/End: Original strand, 17919568 - 17919665
Alignment:
Q  78 aaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 175  Q
    |||||||| | |||||||||||||||||||||||||||| |||||||||| |||||| || ||||||| ||   ||||| ||| ||||||||| ||||    
T  17919568 aaatccctctctaattccgtcactaaattttgcgaccaaggaatttatgatgaatttcattttttccgtcattgatttctctcgctaattttgttttt 17919665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 12205302 - 12205195
Alignment:
Q  68 ggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaatt 167  Q
    ||||||| ||||||||||   |||||||||||||||||||| |||   |||||||| |||| ||||| |||||||||| ||| |||||| || |||||||    
T  12205302 ggaaaacgtgaaatccctcactaattccgtcactaaattttacgatttaagaatttgtgagaaatttaatgttttccgtcactaatttctcttcctaatt 12205203  T
Q  168 ttgctttt 175  Q
    || |||||    
T  12205202 ttactttt 12205195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 15961532 - 15961417
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||| | |||| ||| | ||||||||| |||||||||||||| |||  ||||| | |||||||| || ||||||| ||| |||||||||    
T  15961532 ttagtgagggaaaacgtaaaattcctctctaattccgttactaaattttgcgatcaagaaatttgtaaggaatttcattttttccgtcactaatttccct 15961433  T
Q  160 ccctaattttgctttt 175  Q
    |  |||||||||||||    
T  15961432 cgttaattttgctttt 15961417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 175
Target Start/End: Original strand, 10458807 - 10458893
Alignment:
Q  89 taattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 175  Q
    ||||||| |||||||||||||| ||||| |||||| ||||||| || || ||||||| ||| |||||||||| |||||||| |||||    
T  10458807 taattccatcactaaattttgcaaccaaggaatttgtgaggaaattcattttttccgtcactaatttccctcactaattttactttt 10458893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 46 - 134
Target Start/End: Original strand, 14036620 - 14036708
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattt 134  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||| |||| |||||||||||| ||  |||||| ||||||||||    
T  14036620 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattctgtcattaaattttgcgatcatggaatttgtgaggaattt 14036708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 19175915 - 19175828
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattt 134  Q
    ||||||||||||||| ||||| ||||||  | |||| ||| | ||||||||||||||||||||||||||||  ||||| ||||||||||    
T  19175915 ttagagagggaaatt-agtgagggaaaatgtaaaattcctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattt 19175828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 11431779 - 11431638
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaatttta--tgttttc 143  Q
    |||| ||||||||||||| || | |||||  || |||||| | |||||||||||||||||||||| |  ||||||||| ||||  ||||||  | |||||    
T  11431779 ttagtgagggaaatttagagaggaaaaacgcgatatccctctttaattccgtcactaaattttgc-aataaagaatttgtgagagattttattttttttc 11431681  T
Q  144 cgacacaaatttccctccctaattttgcttttcttaatagtgt 186  Q
    || ||| |||||  |||||||||||| ||||||||| ||||||    
T  11431680 cgtcactaatttttctccctaattttacttttcttagtagtgt 11431638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 187
Target Start/End: Original strand, 16118156 - 16118287
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||| ||| ||| ||||||||||| || | ||||| ||||| |||||||||||| | | |||||| | ||  ||||||  ||||||| ||| |||||    
T  16118156 aaatttaatgagggagaacatgaaatctctctctaatttcgtcattaaattttgcgatcgaggaatttgtaagagattttagtttttccgtcactaattt 16118255  T
Q  156 ccctccctaattttgcttttcttaatagtgta 187  Q
    || ||||||||||| | |||| ||||||||||    
T  16118256 ccgtccctaattttacctttcctaatagtgta 16118287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 184
Target Start/End: Original strand, 28221647 - 28221730
Alignment:
Q  101 taaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgcttttcttaatagt 184  Q
    |||| ||||||| |||| |||||||||| |||||||| ||||||  ||| ||||||||||||| |||||| ||||| |||||||    
T  28221647 taaagtttgcgatcaaaaaatttatgagaaattttattttttccctcactaatttccctccctgattttgtttttcctaatagt 28221730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 175
Target Start/End: Original strand, 5250195 - 5250268
Alignment:
Q  102 aaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 175  Q
    |||||||||||||||  |||||||||||||||| || ||||||| ||| |||||||||| || ||||| |||||    
T  5250195 aaattttgcgaccaagaaatttatgaggaatttcattttttccgtcactaatttccctcgctgatttttctttt 5250268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 176
Target Start/End: Complemental strand, 10929614 - 10929505
Alignment:
Q  68 ggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatga-ggaattttatgttttccgacacaaatttccctccctaat 166  Q
    ||||||||||||||| || | | ||||||||| ||||||||||||| || |||||| ||| || |||| || ||||||| ||| ||||| | ||||||||    
T  10929614 ggaaaacatgaaatctctctttgattccgtcattaaattttgcgacaaaggaatttgtgaggggatttaattttttccgtcactaattttcttccctaat 10929515  T
Q  167 tttgcttttc 176  Q
    |||| |||||    
T  10929514 tttgattttc 10929505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 155
Target Start/End: Original strand, 5270392 - 5270502
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcga-ccaaagaatttatgaggaattttatgttttcc 144  Q
    |||| ||||||| ||||| || ||||||  |||||| ||| | |||||||||||||||||||| ||| | ||| ||||| |||| |||||||| ||||||    
T  5270392 ttagtgagggaattttagagagggaaaatgtgaaattcctctctaattccgtcactaaattttacgatcaaaaaaatttgtgagaaattttattttttcc 5270491  T
Q  145 gacacaaattt 155  Q
      |||||||||    
T  5270492 atcacaaattt 5270502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 3673229 - 3673184
Alignment:
Q  89 taattccgtcactaaattttgcgaccaaagaatttatgaggaattt 134  Q
    |||||||||||||||||||| |||||||| ||||| ||||||||||    
T  3673229 taattccgtcactaaattttacgaccaaaaaatttgtgaggaattt 3673184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 155
Target Start/End: Original strand, 2396249 - 2396313
Alignment:
Q  92 ttccgtcactaaattttgcgaccaaagaatttatgaggaa-ttttatgttttccgacacaaattt 155  Q
    |||||||| |||||||| | |||||||||||||||||||| |||||| ||||||| ||| |||||    
T  2396249 ttccgtcattaaattttacaaccaaagaatttatgaggaatttttattttttccgtcactaattt 2396313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 277
Target Start/End: Original strand, 3237168 - 3237212
Alignment:
Q  233 tttctcagaaagcgaaatattctatccaactataacaccccaacc 277  Q
    |||||||||||  | ||||||||||||||||||||||||||||||    
T  3237168 tttctcagaaaatggaatattctatccaactataacaccccaacc 3237212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 175
Target Start/End: Complemental strand, 9878596 - 9878525
Alignment:
Q  103 aattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 175  Q
    |||||| |||||||||||||| | ||| ||||||| ||||||  ||| || |||||||| |||||||||||||    
T  9878596 aattttacgaccaaagaatttgttagggattttat-ttttccatcactaaattccctccataattttgctttt 9878525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 46 - 185
Target Start/End: Original strand, 58582 - 58721
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||    
T  58582 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttttgaggaattttatgttttccg 58681  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtg 185  Q
     |||||||||||||||||||||||||||||| || |||||    
T  58682 tcacaaatttccctccctaattttgcttttcctagtagtg 58721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 100; Significance: 2e-49; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 46 - 185
Target Start/End: Original strand, 30783334 - 30783473
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  30783334 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaatgaatttgtgaggaattttatgttttccg 30783433  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtg 185  Q
     ||||||||||||| |||||||||||||||| || |||||    
T  30783434 tcacaaatttcccttcctaattttgcttttcctagtagtg 30783473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 41637614 - 41637743
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||| ||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  41637614 ttagtgaggaaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccg 41637713  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     |||||||||||||||||||||||||||||    
T  41637714 tcacaaatttccctccctaattttgctttt 41637743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 51 - 186
Target Start/End: Original strand, 27327617 - 27327752
Alignment:
Q  51 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 150  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||| | || |||||| ||||||||||||||||||||| ||||    
T  27327617 gagggaaatttagtgagggaaaacatgaaatccctctttaattccgtcactaaattttgcgtctaaggaatttgtgaggaattttatgttttccgtcaca 27327716  T
Q  151 aatttccctccctaattttgcttttcttaatagtgt 186  Q
    ||||||| |||||||||||||||||| || ||||||    
T  27327717 aatttccatccctaattttgcttttcctagtagtgt 27327752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 46 - 185
Target Start/End: Original strand, 31266350 - 31266489
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||||| || |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  31266350 ttagtgagggaaatttagcgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccg 31266449  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtg 185  Q
      | |||||||||||||||||||| |||||| || |||||    
T  31266450 taaaaaatttccctccctaattttacttttcctagtagtg 31266489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 29749542 - 29749413
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||| ||||||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||    
T  29749542 ttagtgaggaaaatttagtgagggaaaacatgaaatccctccctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttatgttttccg 29749443  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||||||||||||| |||||||||||||||    
T  29749442 tcacaaatttcccttcctaattttgctttt 29749413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 28841481 - 28841341
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||||||  |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  28841481 ttagtgagggatatttagtgtgggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 28841382  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtgt 186  Q
      || |||||||||| ||||||||||||||| || ||||||    
T  28841381 ttactaatttccctcgctaattttgcttttcctagtagtgt 28841341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 32300447 - 32300576
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||||||||||  |||||| |||||||||| || |||||||    
T  32300447 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccg 32300546  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  32300547 tcactaatttccctcgctaattttgctttt 32300576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 51 - 175
Target Start/End: Complemental strand, 28319713 - 28319589
Alignment:
Q  51 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 150  Q
    ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||||||||||  |||||| |||||||||| || ||||||| |||     
T  28319713 gagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcact 28319614  T
Q  151 aatttccctccctaattttgctttt 175  Q
    |||||||||| ||||||||||||||    
T  28319613 aatttccctcactaattttgctttt 28319589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 22140503 - 22140374
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| ||||| |||||| |||||||||| | |||||||||||||||||||||||||||  |||||| |||||||||| || |||||||    
T  22140503 ttagtgagggaaattttgtgaaagaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccg 22140404  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| ||||||||||  |||||||||||||    
T  22140403 tcactaatttccctcgttaattttgctttt 22140374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 46 - 185
Target Start/End: Complemental strand, 18551392 - 18551253
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||||||| ||||||||| |||||||| | ||||||||||||||||||||||||  || |||||| |||||||||| || |||||||    
T  18551392 ttagtgagggatatttagtgagggaaaacataaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccg 18551293  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtg 185  Q
     ||| ||||| |||| |||||||||||||| ||| |||||    
T  18551292 tcactaattttcctcgctaattttgctttttttagtagtg 18551253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 56 - 175
Target Start/End: Original strand, 37552233 - 37552352
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||||||| ||||||  | |||||||| | ||||||||||| ||||||||||||||||||||||| |||||||||| || ||||||| ||| |||||    
T  37552233 aaatttagtgagggaaaatgtaaaatccctctctaattccgtcattaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 37552332  T
Q  156 ccctccctaattttgctttt 175  Q
    ||||| ||||||||||||||    
T  37552333 ccctcgctaattttgctttt 37552352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 1141532 - 1141661
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||| ||||||||||||||||||||   ||||| |||||||||| || |||||||    
T  1141532 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccg 1141631  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  1141632 tcactaatttccctcgctaattttgctttt 1141661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 15636874 - 15636745
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | ||||| |||||||||||||||||||||   ||||| |||||||||| || |||||||    
T  15636874 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaatttcgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccg 15636775  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  15636774 tcactaatttccctcgctaattttgctttt 15636745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 46 - 179
Target Start/End: Complemental strand, 18916539 - 18916407
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||| ||||||||| || |||||||||||||||||| | |||||| ||||||||||||||||| |||| ||||| ||||| ||||||| |||||||    
T  18916539 ttagtgagagaaatttagggagggaaaacatgaaatccctctctaattcagtcactaaattttgcgatcaaaaaatttgtgagggattttat-ttttccg 18916441  T
Q  146 acacaaatttccctccctaattttgcttttctta 179  Q
     ||  ||||||||| |||||||||||||||||||    
T  18916440 tcagtaatttccctgcctaattttgcttttctta 18916407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 37724131 - 37724002
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||| |||||||||||| ||||||| ||||||||||   |||| |||||||||||||||||||||||||||||| |||||||||| || |||||||    
T  37724131 ttagtgagagaaatttagtgagggaaaacgtgaaatccctcgctaataccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccg 37724032  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| || ||||| |||||    
T  37724031 tcactaatttccctcgctgatttttctttt 37724002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 56 - 175
Target Start/End: Original strand, 12779606 - 12779725
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||||||| ||||||| | |||| ||| | ||||| |||||||||||||||||||||| |||||| |||||||||| || ||||||| ||| |||||    
T  12779606 aaatttagtgagggaaaacgtaaaattcctctctaatttcgtcactaaattttgcgaccaatgaatttgtgaggaatttcattttttccgtcactaattt 12779705  T
Q  156 ccctccctaattttgctttt 175  Q
    ||||| ||||||||||||||    
T  12779706 ccctcgctaattttgctttt 12779725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 52 - 175
Target Start/End: Complemental strand, 13613226 - 13613103
Alignment:
Q  52 agggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaa 151  Q
    |||||| |||||||| ||||||| | |||||||| | ||||||||||||||||||||||||||||||||||| |||||||||| || |||| || ||| |    
T  13613226 agggaagtttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcatttttttcgtcacta 13613127  T
Q  152 atttccctccctaattttgctttt 175  Q
    |||| |||| |||||||| |||||    
T  13613126 attttcctcgctaatttttctttt 13613103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 43408636 - 43408521
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||| | |||||||| | ||||||||||||||||||||||||||||  ||||| |||||||||| || ||||||| ||| |||||||||    
T  43408636 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccct 43408537  T
Q  160 ccctaattttgctttt 175  Q
    | ||||||||||||||    
T  43408536 cactaattttgctttt 43408521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 44476500 - 44476385
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||||||||||| | ||||| || | |||||||||||||||||||||||||||| |||||| ||| |||||| || ||||||| ||| |||||||||    
T  44476500 ttagtgaaggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaagaatttcattttttccgtcactaatttccct 44476401  T
Q  160 ccctaattttgctttt 175  Q
    | ||||||||||||||    
T  44476400 cgctaattttgctttt 44476385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 46 - 188
Target Start/End: Complemental strand, 13788194 - 13788052
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||| ||||||||||| ||||||  | |||||||| | ||||| |||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  13788194 ttagtgaggaaaatttagtgagggaaaatgtaaaatccctctctaatttcgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 13788095  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtgtaa 188  Q
     |||  ||||||||| ||||||||||||||  || ||||||||    
T  13788094 tcactgatttccctcgctaattttgctttttctagtagtgtaa 13788052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 32008948 - 32009078
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaatttta-tgttttcc 144  Q
    |||| |||||||||||| ||| ||||||| | |||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| | | ||||||    
T  32008948 ttagtgagggaaatttaatgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttttcc 32009047  T
Q  145 gacacaaatttccctccctaattttgctttt 175  Q
    | ||| ||||| |||| ||||||||||||||    
T  32009048 gtcactaattttcctcgctaattttgctttt 32009078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 8430292 - 8430421
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||| ||| || | ||||| ||||||||||||| |||||||    
T  8430292 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgatcataaaatttgtgaggaattttattttttccg 8430391  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||| | ||||||||| ||||    
T  8430392 tcactaatttcccccgctaattttgttttt 8430421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 20065213 - 20065084
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| | ||||| |||||||||| | |||||| ||||||||||||||||||||   ||||| |||||||||| || |||||||    
T  20065213 ttagtgagggaaattttgtgaggaaaaacgtgaaatccctctctaattcagtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccg 20065114  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  20065113 tcactaatttccctcgctaattttgctttt 20065084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 23388517 - 23388388
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||||||||||   ||||| ||| |||||| || |||||||    
T  23388517 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaagaatttcattttttccg 23388418  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||| ||||    
T  23388417 tcaccaatttccctcgctaattttgttttt 23388388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 46 - 174
Target Start/End: Complemental strand, 26687830 - 26687701
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaatttta-tgttttcc 144  Q
    |||| ||| |||||||||||| |||||||||||||||| | | |||||||||||||||||||||| ||||| |||||| |||| ||||||| | ||||||    
T  26687830 ttagtgagcgaaatttagtgacggaaaacatgaaatccatctctaattccgtcactaaattttgcaaccaaggaatttgtgagaaattttatttttttcc 26687731  T
Q  145 gacacaaatttccctccctaattttgcttt 174  Q
    | ||  ||||||||||| ||||||||||||    
T  26687730 gtcattaatttccctccttaattttgcttt 26687701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 41736168 - 41736297
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||| ||||||||||| ||||||  | |||||||| | ||||| |||||||||||||||||| ||| |||||| |||||||||| || |||||||    
T  41736168 ttagtgaggaaaatttagtgagggaaaatgtaaaatccctctctaatttcgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttccg 41736267  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  41736268 tcactaatttccctcgctaattttgctttt 41736297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 60 - 175
Target Start/End: Original strand, 7093578 - 7093693
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||| | |||||||| | |||||  |||||||||||||||||||||| ||||| |||||||||| || ||||||| ||| |||||||||    
T  7093578 ttagtgagggaaaacgtaaaatccctctctaattttgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactaatttccct 7093677  T
Q  160 ccctaattttgctttt 175  Q
    | ||||||||||||||    
T  7093678 cgctaattttgctttt 7093693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 58 - 188
Target Start/End: Original strand, 36550844 - 36550973
Alignment:
Q  58 atttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttcc 157  Q
    ||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||| || || ||||| | ||||| ||||||  ||| |||||||    
T  36550844 atttagtgagggaaaacatgaaatccctctataattccatcactaaattttgcgaccaaataacttgtgaggga-tttattttttccatcactaatttcc 36550942  T
Q  158 ctccctaattttgcttttcttaatagtgtaa 188  Q
    ||| ||||||||| ||||  || ||||||||    
T  36550943 ctctctaattttgttttttctagtagtgtaa 36550973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 58 - 175
Target Start/End: Complemental strand, 14757248 - 14757131
Alignment:
Q  58 atttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttcc 157  Q
    ||||||||| ||||||||||||||| || | ||||||||||||||||||||||||||||  ||||| |||||||||| || ||||||| ||  ||||| |    
T  14757248 atttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcattaattttc 14757149  T
Q  158 ctccctaattttgctttt 175  Q
     || ||||||||||||||    
T  14757148 ttcgctaattttgctttt 14757131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 21293850 - 21293721
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||| ||||||| || | |||||||||||||||||||| ||||||  |||||| |||| ||||| || |||||||    
T  21293850 ttagtgagggaaattttgtgagggaaaacgtgaaatctctctctaattccgtcactaaattttacgaccatggaatttgtgagaaatttcattttttccg 21293751  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||| ||||    
T  21293750 tcactaatttccctcgctaattttgttttt 21293721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 32185828 - 32185957
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||| ||||||   |||||  ||||||||| || |||||||    
T  32185828 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgaccatgaaatttgcgaggaatttcattttttccg 32185927  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||| ||||    
T  32185928 tcactaatttccctcgctaattttgttttt 32185957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 51 - 175
Target Start/End: Original strand, 44722933 - 44723057
Alignment:
Q  51 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 150  Q
    |||||| |||||||||  ||||| ||||||||||| | ||||||||||||||||||||||||| || |||||| | |||||||| || ||||||  ||      
T  44722933 gagggatatttagtgagagaaaatatgaaatccctctctaattccgtcactaaattttgcgactaaggaatttgtaaggaatttcattttttccatcatt 44723032  T
Q  151 aatttccctccctaattttgctttt 175  Q
    |||||||||| ||||||||||||||    
T  44723033 aatttccctcgctaattttgctttt 44723057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 56 - 175
Target Start/End: Complemental strand, 23858086 - 23857968
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||||||| ||||||| | |||||  | | |||||||||||||||||||||||||||| |||||| |||||||||| || ||| ||| ||| |||||    
T  23858086 aaatttagtgagggaaaacgtaaaatcattctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcat-tttcccgtcactaattt 23857988  T
Q  156 ccctccctaattttgctttt 175  Q
    ||||| ||||||||||||||    
T  23857987 ccctcgctaattttgctttt 23857968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 46 - 125
Target Start/End: Original strand, 27523007 - 27523086
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttat 125  Q
    |||| |||||| ||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||    
T  27523007 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttat 27523086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 70 - 168
Target Start/End: Original strand, 35697475 - 35697573
Alignment:
Q  70 aaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattt 168  Q
    |||||||||||| ||| | ||||||||||||||||||||||||||||| ||||| ||||  ||||||| |||||||  || ||||||||||||||||||    
T  35697475 aaaacatgaaattcctctctaattccgtcactaaattttgcgaccaaaaaatttgtgagagattttattttttccgttactaatttccctccctaattt 35697573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 46 - 176
Target Start/End: Complemental strand, 44366136 - 44366006
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||| |||||||| | |||||||||||||||| | ||||||| ||| | ||||||| |||||| |||||| ||||||||||||| ||||| |    
T  44366136 ttagtgagggaagtttagtgaggaaaaacatgaaatccctctctaattccctcattgaattttgtgaccaacgaatttgtgaggaattttattttttctg 44366037  T
Q  146 acacaaatttccctccctaattttgcttttc 176  Q
     ||  |||||||||| ||||||||| |||||    
T  44366036 tcattaatttccctctctaattttgtttttc 44366006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 90 - 175
Target Start/End: Complemental strand, 27040003 - 27039918
Alignment:
Q  90 aattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 175  Q
    |||||||||||||||||||||||||||  ||||| |||||||||| || ||||||| ||| |||||||||| ||||||||||||||    
T  27040003 aattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttt 27039918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 28262360 - 28262489
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | ||||||||||||||||||||| |||||   ||||| |||||||||| || ||||||     
T  28262360 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgtgaccatgaaatttgtgaggaatttcattttttcca 28262459  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||  |||||||| |||||    
T  28262460 tcactaatttcccttgctaattttactttt 28262489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 26243446 - 26243331
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| | ||||| | |||| ||| | |||||||||||||||||||| ||||||| |||||| ||||||||||||| ||| ||| ||| |||||||||    
T  26243446 ttagtgaggaaaaacgtaaaattcctctctaattccgtcactaaattttacgaccaatgaatttgtgaggaattttatttttaccgccactaatttccct 26243347  T
Q  160 ccctaattttgctttt 175  Q
    |  |||||||||||||    
T  26243346 cgttaattttgctttt 26243331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 38362388 - 38362281
Alignment:
Q  68 ggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaatt 167  Q
    ||||||| | |||||| ||| |||||| |||||| |||||| |||||||||||||| |||||||||| || ||||||| ||| |||||||||  ||||||    
T  38362388 ggaaaacgtaaaatccttttctaattctgtcacttaattttacgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcccttactaatt 38362289  T
Q  168 ttgctttt 175  Q
    ||||||||    
T  38362288 ttgctttt 38362281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 46 - 185
Target Start/End: Complemental strand, 37802517 - 37802379
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||||| || ||||||| | |||||  | | ||||||||||||||||||||||||||||| ||||   |||  ||||||| |||||||    
T  37802517 ttagtgagggaaatttagagagggaaaacgtaaaatcagtctctaattccgtcactaaattttgcgaccaaaaaattgc-gagagattttattttttccg 37802419  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtg 185  Q
     ||  |||||| ||||||||||||||||||| || |||||    
T  37802418 tcatcaatttctctccctaattttgcttttcctagtagtg 37802379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 56 - 173
Target Start/End: Original strand, 8763640 - 8763757
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    |||||||||||||||||||||||||||| | | ||||||||||| ||||||||  || ||| |||||| || |  ||||||| ||||||| ||| || ||    
T  8763640 aaatttagtgaaggaaaacatgaaatccatctctaattccgtcattaaattttatgatcaaggaatttgtgcgagattttattttttccgtcactaactt 8763739  T
Q  156 ccctccctaattttgctt 173  Q
      ||||||||||||||||    
T  8763740 ttctccctaattttgctt 8763757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 53 - 186
Target Start/End: Original strand, 18609517 - 18609650
Alignment:
Q  53 gggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaa 152  Q
    |||||||||||||| |||||||||||||| ||| | ||||| | | || ||||||||||| ||| |||||| ||||| ||| ||| || |||| ||| ||    
T  18609517 gggaaatttagtgagggaaaacatgaaatacctctctaatttcatgacaaaattttgcgatcaaggaatttgtgagggattctattttctccgtcactaa 18609616  T
Q  153 tttccctccctaattttgcttttcttaatagtgt 186  Q
    ||| ||||| || |||| |||||| |||||||||    
T  18609617 ttttcctccttatttttacttttcctaatagtgt 18609650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 56 - 159
Target Start/End: Original strand, 40018808 - 40018911
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||||||| ||||||||||||||| || | ||||||  ||||| |||||||| ||||| |||||| | || |||||||| ||||||| ||| |||||    
T  40018808 aaatttagtgagggaaaacatgaaatctctctctaattctctcactgaattttgcaaccaacgaatttgtaagaaattttattttttccgtcactaattt 40018907  T
Q  156 ccct 159  Q
    ||||    
T  40018908 ccct 40018911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 159
Target Start/End: Complemental strand, 13134749 - 13134646
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    |||||||| || ||||||| |||||||||||| |||||  |||| |||||||| |||| ||| || || ||||| ||||||| ||||||| ||| |||||    
T  13134749 aaatttagagatggaaaacttgaaatccctttctaattttgtcaataaattttacgactaaaaaaattgtgagggattttattttttccgtcactaattt 13134650  T
Q  156 ccct 159  Q
    ||||    
T  13134649 ccct 13134646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 186
Target Start/End: Original strand, 2556134 - 2556231
Alignment:
Q  89 taattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgcttttcttaatagtgt 186  Q
    |||||||||||||||||||| | |||||  ||||| |||| |||||||| ||||||  ||| ||||| |||| |||||||| ||||| ||| ||||||    
T  2556134 taattccgtcactaaattttacaaccaagaaatttgtgagaaattttattttttccatcactaattttcctctctaattttactttttttagtagtgt 2556231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 111
Target Start/End: Complemental strand, 29998698 - 29998633
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcg 111  Q
    |||| ||||||| ||||| |||||||||| |||||||| | | |||||||||||||||||||||||    
T  29998698 ttagtgagggaattttagagaaggaaaacgtgaaatccttctctaattccgtcactaaattttgcg 29998633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 62 - 155
Target Start/End: Complemental strand, 31966647 - 31966555
Alignment:
Q  62 agtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||| ||| ||||||||||| || | |||||  || |||||||||||||||||| |||||||| ||| ||||||| ||||||| ||| |||||    
T  31966647 agtgagggataacatgaaatctctctctaattatgttactaaattttgcgaccaaggaatttat-agggattttattttttccgtcactaattt 31966555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 36373896 - 36374034
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||| ||||||||||| ||||||  |||||| ||| ||  |||| ||||||||||||| ||| ||| ||||||  |||| ||||||| |||||||    
T  36373896 ttagtgaggaaaatttagtgagggaaaatgtgaaattcctcta--attcagtcactaaattttacgatcaaggaatttgagagggattttattttttccg 36373993  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtgt 186  Q
     | | || ||  ||||||||||||| ||||| || ||||||    
T  36373994 tcgctaaatttactccctaattttgtttttcctagtagtgt 36374034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 9004447 - 9004359
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattt 134  Q
    |||| |||||||||||||||| ||||||  | ||||  || | ||||||| |||||||||||||  || || ||||||||||| |||||    
T  9004447 ttagtgagggaaatttagtgagggaaaatgtaaaatttctctctaattccatcactaaattttgtaactaaggaatttatgagaaattt 9004359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 175
Target Start/End: Original strand, 22192232 - 22192304
Alignment:
Q  103 aattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 175  Q
    ||||||| ||||||  ||||| ||||  ||||||| ||||||| ||| |||||| |||||| |||||||||||    
T  22192232 aattttgtgaccaataaatttgtgagagattttattttttccgtcactaatttctctccctgattttgctttt 22192304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 4e-48; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 33818700 - 33818571
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  33818700 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccg 33818601  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     |||||||||||||||| ||||||||||||    
T  33818600 tcacaaatttccctccccaattttgctttt 33818571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 60 - 186
Target Start/End: Complemental strand, 25397913 - 25397787
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||    
T  25397913 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgacgaattttatgttttccgtcacaaatttccct 25397814  T
Q  160 ccctaattttgcttttcttaatagtgt 186  Q
    ||||||||||||||||| || ||||||    
T  25397813 ccctaattttgcttttcctagtagtgt 25397787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 23423895 - 23423755
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||| |||||||||||| |||||||||||||||||| | |||||||||||||||||||||| ||||| |||||| |||||||||||||||||| ||    
T  23423895 ttagtgagtgaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaaccaaggaatttgtgaggaattttatgtttttcg 23423796  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtgt 186  Q
     ||||||||||||||||||||||||||| || || ||||||    
T  23423795 tcacaaatttccctccctaattttgcttatcctagtagtgt 23423755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 618294 - 618434
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  618294 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 618393  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtgt 186  Q
     ||| |||||||||| ||||||||||||||  |||||||||    
T  618394 tcactaatttccctcgctaattttgctttttctaatagtgt 618434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 16121978 - 16121849
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||||||| |||||||||||||||||| | ||||||||||||||||||||| |||||| |||||| ||||||||||||| |||||||    
T  16121978 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaattttattttttccg 16121879  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  16121878 tcactaatttccctcgctaattttgctttt 16121849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 46 - 157
Target Start/End: Complemental strand, 33816897 - 33816786
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |    
T  33816897 ttagtgagggaaatttagtgagggaaaacatgaaattcctttctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctg 33816798  T
Q  146 acacaaatttcc 157  Q
     |||||||||||    
T  33816797 tcacaaatttcc 33816786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 46 - 185
Target Start/End: Complemental strand, 27428151 - 27428012
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||| |||||||| || ||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||| || |||||||| |||| ||    
T  27428151 ttagtgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttattagcaattttatttttttcg 27428052  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtg 185  Q
     ||| ||||||||||||||||||| ||||| ||| |||||    
T  27428051 tcactaatttccctccctaatttttcttttattagtagtg 27428012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 51 - 186
Target Start/End: Complemental strand, 35620477 - 35620343
Alignment:
Q  51 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 150  Q
    |||||| ||||||||| |||||||||||||||| | | |||||||||||||||||||||||||||| |||||| ||||||| ||||| ||||||| |||     
T  35620477 gagggatatttagtgagggaaaacatgaaatccttctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaa-tttattttttccgtcact 35620379  T
Q  151 aatttccctccctaattttgcttttcttaatagtgt 186  Q
    |||||||||| ||||||||||||||  |||||||||    
T  35620378 aatttccctcgctaattttgctttttctaatagtgt 35620343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 17039770 - 17039641
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||| |||||| ||||||| |||||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  17039770 ttagtgagggaaatatagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 17039671  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| ||||| |||| ||||||||||||||    
T  17039670 tcactaattttcctcactaattttgctttt 17039641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 51 - 175
Target Start/End: Complemental strand, 2472848 - 2472724
Alignment:
Q  51 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 150  Q
    |||||| ||||||||| |||||||||||||||||| | ||||||||||| |||||||||||||||| |||||| |||||||||| || ||||||| |||     
T  2472848 gagggatatttagtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcact 2472749  T
Q  151 aatttccctccctaattttgctttt 175  Q
    ||||||| || ||||||||||||||    
T  2472748 aatttccttcactaattttgctttt 2472724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 746993 - 746878
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||| |||||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || ||||||| ||| |||||||||    
T  746993 ttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 746894  T
Q  160 ccctaattttgctttt 175  Q
    | ||||||||||||||    
T  746893 cgctaattttgctttt 746878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 8886990 - 8886861
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| ||||||  | |||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || |||| ||    
T  8886990 ttagtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttttcg 8886891  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||||||||| |||| ||||||||||||||    
T  8886890 tcacaaattttcctcgctaattttgctttt 8886861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 23975635 - 23975764
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||||||||||   ||||| |||||||||| || |||||||    
T  23975635 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccg 23975734  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  23975735 tcactaatttccctcgctaattttgctttt 23975764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 25673367 - 25673228
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||||||||  ||||||||||||||||| | ||||||||||||| ||||||||||||||||||||| | |||| |||||| |||||||    
T  25673367 ttagtgagggaaatttagtgacagaaaacatgaaatccctctctaattccgtcactgaattttgcgaccaaagaatttgt-aggagttttattttttccg 25673269  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtgt 186  Q
     ||| ||||| |||||||||||||  ||||| || ||||||    
T  25673268 tcactaattttcctccctaatttttattttcctagtagtgt 25673228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 8108999 - 8108870
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||| ||||||| |||| |||||||||||||| ||| | |||||||||||||||||||||||||||   ||||| |||||||||| || |||||||    
T  8108999 ttagtgagagaaattttgtgagggaaaacatgaaattcctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccg 8108900  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  8108899 tcactaatttccctctctaattttgctttt 8108870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 12045727 - 12045856
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| ||||||| | |||||| | | |||||||||||||||||||| |||||||  ||||| |||||||||| || |||||||    
T  12045727 ttagtgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttacgaccaagaaatttgtgaggaatttcattttttccg 12045826  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  12045827 tcactaatttccctcgctaattttgctttt 12045856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 12328365 - 12328236
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||||||| |||||||||||||| ||| | |||||||||||||||||||||||| |||  ||||| |||||||||| || |||||||    
T  12328365 ttagtgagggatatttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcattttttccg 12328266  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
      || |||||||||| ||||||||||||||    
T  12328265 ttactaatttccctcactaattttgctttt 12328236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 36196394 - 36196523
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||  |||||||||| | |||||||||||||||||||||||||||  || ||| |||||||||| || |||||||    
T  36196394 ttagtgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgcgaccatggattttgtgaggaatttcattttttccg 36196493  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  36196494 tcactaatttccctcgctaattttgctttt 36196523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 16631999 - 16631884
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||||||||||| | |||||||| | ||||||||||||||||||||| |||||| |||||| |||||||||| || ||||||| ||| |||||||||    
T  16631999 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 16631900  T
Q  160 ccctaattttgctttt 175  Q
    | |||||||| |||||    
T  16631899 cgctaatttttctttt 16631884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 56 - 171
Target Start/End: Complemental strand, 26708714 - 26708599
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||||||| ||||||| | |||| ||| | |||||||||||||||||||||||||||| |||||| |||||||||| || ||||||| ||| |||||    
T  26708714 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccggcactaattt 26708615  T
Q  156 ccctccctaattttgc 171  Q
    ||||| ||||||||||    
T  26708614 ccctcgctaattttgc 26708599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 56 - 171
Target Start/End: Complemental strand, 26978448 - 26978333
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||||||| ||||||| | |||| ||| | |||||||||||||||||||||||||||| |||||| |||||||||| || ||||||| ||| |||||    
T  26978448 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccggcactaattt 26978349  T
Q  156 ccctccctaattttgc 171  Q
    ||||| ||||||||||    
T  26978348 ccctcgctaattttgc 26978333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 38837796 - 38837681
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||| | |||||||| | ||||||| |||||||||||||||||||| |||||| |||||||||| || ||||||| ||| |||||||||    
T  38837796 ttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 38837697  T
Q  160 ccctaattttgctttt 175  Q
    | ||||||||||||||    
T  38837696 cgctaattttgctttt 38837681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 70 - 176
Target Start/End: Complemental strand, 33735088 - 33734982
Alignment:
Q  70 aaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaatttt 169  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||  ||  ||||| |||||||||||||    
T  33735088 aaaacatgaaacccctctttaattccgtcactaaattttgcgaccaaggaatttatgagggattttattttttccctcattaattttcctccctaatttt 33734989  T
Q  170 gcttttc 176  Q
    |||||||    
T  33734988 gcttttc 33734982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 7888797 - 7888926
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||| ||||||||||| ||||||| | |||||||| | ||| |||||||||||||||| ||||||| |||||| |||||||||| || |||||||    
T  7888797 ttagtgaggaaaatttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccg 7888896  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||  |||||||||| ||||||||||||||    
T  7888897 tcaataatttccctcgctaattttgctttt 7888926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 54 - 175
Target Start/End: Complemental strand, 13620258 - 13620137
Alignment:
Q  54 ggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaat 153  Q
    ||||||||||||| |||||||||||||||||| | |||||| ||||| |||||||||||||||  ||||| ||||  ||||||| ||||||| ||| |||    
T  13620258 ggaaatttagtgagggaaaacatgaaatccctctctaattctgtcacaaaattttgcgaccaacaaatttgtgagagattttattttttccgtcactaat 13620159  T
Q  154 ttccctccctaattttgctttt 175  Q
    |||||||||| ||||| |||||    
T  13620158 ttccctccctgatttttctttt 13620137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 15060973 - 15061102
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| | ||||| |||||||||| | |||||||||||||||||||||||||||   ||||| |||||||||| || ||||| |    
T  15060973 ttagtgagggaaattttgtgaggaaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttcgg 15061072  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  15061073 tcactaatttccctcgctaattttgctttt 15061102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 36832029 - 36831900
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| ||||||  | |||||||| | ||||||| ||||||||||||| |||||| ||||||||||||||||| || |||| ||    
T  36832029 ttagtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccatcactaaattttgtgaccaaggaatttatgaggaatttcatttttttcg 36831930  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     | | |||||||||| ||||||||||||||    
T  36831929 tccctaatttccctcactaattttgctttt 36831900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 60 - 175
Target Start/End: Original strand, 10494751 - 10494866
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||| | |||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || ||||||| ||| |||||||||    
T  10494751 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 10494850  T
Q  160 ccctaattttgctttt 175  Q
    | |||  |||||||||    
T  10494851 cgctacatttgctttt 10494866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 56 - 187
Target Start/End: Complemental strand, 24138970 - 24138839
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||||||| ||||||| | ||||| || | ||||||||||||||||||||||||||||  ||||| |||| ||||| || ||||||| ||| |||||    
T  24138970 aaatttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaagcaatttgtgagaaatttcattttttccgtcaccaattt 24138871  T
Q  156 ccctccctaattttgcttttcttaatagtgta 187  Q
     |||| ||||||||||||||  ||||||||||    
T  24138870 tcctcgctaattttgctttttctaatagtgta 24138839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 36597465 - 36597350
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||||| |||| ||| | |||||| ||||||||||||| ||||||| |||||| ||||||||||||||||||||| || ||||||  ||    
T  36597465 ttagtgagggaaaacataaaattcctctctaattctgtcactaaattttacgaccaaggaatttgtgaggaattttatgttttccgtcataaatttttct 36597366  T
Q  160 ccctaattttgctttt 175  Q
    ||| ||||||||||||    
T  36597365 cccaaattttgctttt 36597350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 51 - 185
Target Start/End: Complemental strand, 25652717 - 25652583
Alignment:
Q  51 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 150  Q
    |||||||||||||||| ||||||  | |||||||| | |||||||||||| |||||||||||| || |||||| |||||||||| || ||||| | |||     
T  25652717 gagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtcacaaaattttgcgactaaggaatttgtgaggaatttcattttttctgtcact 25652618  T
Q  151 aatttccctccctaattttgcttttcttaatagtg 185  Q
     ||||||||| ||||||||||||||  ||||||||    
T  25652617 gatttccctcgctaattttgctttttctaatagtg 25652583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 17986729 - 17986858
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||||||| |||||||||||||| | | | ||||||||||||||||||||||||| || |||||| ||| |||||| || |||||||    
T  17986729 ttagtgagggatatttagtgagggaaaacatgaaattcttctctaattccgtcactaaattttgcgacgaaggaatttgtgaagaatttcattttttccg 17986828  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||| ||| |||||||| |||||    
T  17986829 tcactaatttctctcactaattttactttt 17986858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 20959508 - 20959637
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||||| || ||||||| ||||||| || | |||||||||||||||||||| |||| || |||||| ||||||||||||| |||||||    
T  20959508 ttagtgagggaaatttagagagggaaaacgtgaaatctctctctaattccgtcactaaattttacgactaaggaatttgtgaggaattttattttttccg 20959607  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||   |||| ||||||||||||| |||||    
T  20959608 tcagtgattttcctccctaattttactttt 20959637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 51 - 175
Target Start/End: Complemental strand, 28265609 - 28265485
Alignment:
Q  51 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 150  Q
    ||||||||||| |||| |||| || | |||||||| | |||||||||||||||||||||||||||  |||||| |||||||||| || ||||||| |||     
T  28265609 gagggaaattttgtgagggaagacgtaaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcact 28265510  T
Q  151 aatttccctccctaattttgctttt 175  Q
    ||||| |||| |||||||| |||||    
T  28265509 aattttcctcgctaattttactttt 28265485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 46 - 185
Target Start/End: Complemental strand, 11927925 - 11927786
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||| ||||| || ||||||| |||||||||| | ||||||||||||||||||||||||| ||  ||||| ||||| ||||||| ||||||     
T  11927925 ttagtgagggaattttagagacggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacgaagtaatttgtgagggattttattttttcca 11927826  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtg 185  Q
     | | |||||  ||||||||||||||||||  ||||||||    
T  11927825 tctctaatttatctccctaattttgctttttctaatagtg 11927786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 17772093 - 17771978
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||||| ||||| || | |||||||||||||||||||||||| ||| |||||| |||||||||| || ||||||| ||| |||||||||    
T  17772093 ttagtgagggaaaacataaaatctctctctaattccgtcactaaattttgcgatcaaggaatttttgaggaatttcattttttccgtcactaatttccct 17771994  T
Q  160 ccctaattttgctttt 175  Q
    | || ||||| |||||    
T  17771993 cgctgatttttctttt 17771978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 60 - 175
Target Start/End: Original strand, 40484058 - 40484173
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||| | |||||||| | |||||||||||||||||||||||||||| |||||||| || ||||| ||  |||||| ||| |||||||||    
T  40484058 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttataagaaatttcattatttccgtcactaatttccct 40484157  T
Q  160 ccctaattttgctttt 175  Q
    | |||||||| |||||    
T  40484158 cgctaatttttctttt 40484173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 7003867 - 7003740
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||| ||||||| || ||  |||||||||||||||||||||| ||  |||||| ||||||||||| | |||||||    
T  7003867 ttagtgagggaaattttgtgagggaaaacgtgaaatctctcta--attccgtcactaaattttgcgatcatggaatttgtgaggaattttcttttttccg 7003770  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||| ||||    
T  7003769 tcactaatttccctcgctaattttgttttt 7003740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 46 - 188
Target Start/End: Complemental strand, 10420391 - 10420249
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||| || ||||| || |||||||||||||||||| | |||||  |||||||||||||||||||||  || || ||||| ||||||| |||||||    
T  10420391 ttagtgaggaaattttagagagggaaaacatgaaatccctctctaattttgtcactaaattttgcgaccaacaaaattgtgagggattttattttttccg 10420292  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtgtaa 188  Q
     ||| |||||||||| ||||||||| |||  ||| ||||||||    
T  10420291 tcactaatttccctctctaattttgatttctttagtagtgtaa 10420249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 23408980 - 23409110
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaatttta-tgttttcc 144  Q
    |||| |||||||||||||||| ||||||| | |||||||| | |||||||||||||||||||||||| |||  ||||| |||||||||| | | ||||||    
T  23408980 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcatttttttcc 23409079  T
Q  145 gacacaaatttccctccctaattttgctttt 175  Q
    | ||| |||||  ||| ||||||||||||||    
T  23409080 gtcactaatttttctcgctaattttgctttt 23409110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 56 - 181
Target Start/End: Complemental strand, 3080825 - 3080700
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||||||| |||||||||||||||||| |  |||| | ||||||| ||||| ||| ||||||||| ||||  ||||||| ||||||  ||| |||||    
T  3080825 aaatttagtgagggaaaacatgaaatccctctcaaatttcatcactaagttttgtgactaaagaatttgtgagagattttattttttccatcacgaattt 3080726  T
Q  156 ccctccctaattttgcttttcttaat 181  Q
    |||| |||||||||||||||| ||||    
T  3080725 ccctacctaattttgcttttcctaat 3080700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 51 - 175
Target Start/End: Original strand, 5982650 - 5982775
Alignment:
Q  51 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaatttta-tgttttccgacac 149  Q
    |||| ||||||||||| ||||||| | |||||||| | |||||||||||||||| ||||||||||| |||||| |||||||||  | | ||||||| |||    
T  5982650 gaggaaaatttagtgagggaaaacctaaaatccctctctaattccgtcactaaactttgcgaccaaggaatttgtgaggaattccatttttttccgtcac 5982749  T
Q  150 aaatttccctccctaattttgctttt 175  Q
     |||||||||| || |||||||||||    
T  5982750 taatttccctcgctgattttgctttt 5982775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 51 - 188
Target Start/End: Complemental strand, 17036546 - 17036409
Alignment:
Q  51 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 150  Q
    ||||| ||||||| || |||||||   |||||||| | |||||| ||||||||||||||||||||| |||||| ||||||||||||| | ||||| |||     
T  17036546 gagggtaatttagagagggaaaacgcaaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgaggaattttatttcttccgtcact 17036447  T
Q  151 aatttccctccctaattttgcttttcttaatagtgtaa 188  Q
    ||| || |||||||||||||| |||  || ||||||||    
T  17036446 aatctcgctccctaattttgcattttctagtagtgtaa 17036409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 4125313 - 4125198
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||  ||||||| || | |||||||||||||||||||||||||||   ||||| |||||||||| || ||||||| ||| |||||||||    
T  4125313 ttagtgagggaaaatgtgaaatctctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccct 4125214  T
Q  160 ccctaattttgctttt 175  Q
    | |||||||| |||||    
T  4125213 cgctaattttactttt 4125198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 20188070 - 20187941
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    |||||||||||  |||||| |  |||| || | |||||| |||| |||||||||||| ||| |||||| ||||||||||||| ||||||| ||| |||||    
T  20188070 aaatttagtgagagaaaacgtagaatcactctctaattctgtcattaaattttgcgatcaaggaatttgtgaggaattttattttttccgtcactaattt 20187971  T
Q  156 ccctccctaattttgcttttcttaatagtg 185  Q
    || || ||||||||||||||  ||||||||    
T  20187970 ccttcgctaattttgcttttgctaatagtg 20187941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 54 - 179
Target Start/End: Complemental strand, 32726857 - 32726732
Alignment:
Q  54 ggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaat 153  Q
    |||||||||| || ||||||  ||||||  || | |||||||||||||||||||||||||||| |||||| | | |  |||||| ||||||  ||| |||    
T  32726857 ggaaatttagagagggaaaatgtgaaatttctctctaattccgtcactaaattttgcgaccaaggaatttgtcaagggttttatattttccatcactaat 32726758  T
Q  154 ttccctccctaattttgcttttctta 179  Q
    ||| ||||||||||||||||||||||    
T  32726757 ttcgctccctaattttgcttttctta 32726732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 46 - 145
Target Start/End: Original strand, 17079405 - 17079504
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||  | ||||||||| |||||||| | ||||||||||||||||||||||||||||  ||||| | ||| ||||||| |||||||    
T  17079405 ttagtgagggaaatttagaaagggaaaacatcaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtaagggattttattttttccg 17079504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 60 - 175
Target Start/End: Original strand, 35778155 - 35778270
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| |||||||||||||||||| | | |||| || | |||||||||||||||| |||||| ||||  ||||||| ||||||  ||| |||||||||    
T  35778155 ttagtgagggaaaacatgaaatccctatctcattctgtgattaaattttgcgaccaatgaatttgtgagagattttattttttccatcactaatttccct 35778254  T
Q  160 ccctaattttgctttt 175  Q
    ||| |||||| |||||    
T  35778255 cccaaattttactttt 35778270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 13974217 - 13974088
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | | |||||||||||||||||  ||||||   ||||| ||| |||||| || |||| ||    
T  13974217 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctgattccgtcactaaatttcacgaccatgaaatttgtgaagaatttcatttttttcg 13974118  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     | | |||||||||| ||||||||||||||    
T  13974117 tcgctaatttccctcgctaattttgctttt 13974088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 70 - 142
Target Start/End: Complemental strand, 31853203 - 31853131
Alignment:
Q  70 aaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgtttt 142  Q
    ||||||||||||| || | ||||||||||||||||||||||||||| | ||||||||||| ||||||| ||||    
T  31853203 aaaacatgaaatctctctctaattccgtcactaaattttgcgaccataaaatttatgagggattttatttttt 31853131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 89 - 175
Target Start/End: Complemental strand, 16472277 - 16472191
Alignment:
Q  89 taattccgtcactaaa-ttttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 175  Q
    |||||| ||||||||| |||||||||||| |||||| ||| | ||||||| |||| |||||| ||||| |||||| ||||||||||||    
T  16472277 taattctgtcactaaacttttgcgaccaacgaatttttgaaggattttatttttttcgacactaattt-cctcccaaattttgctttt 16472191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 155
Target Start/End: Original strand, 9024267 - 9024323
Alignment:
Q  99 actaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    |||||||||||||||||| ||||||| |||| ||||||| ||||||| ||| |||||    
T  9024267 actaaattttgcgaccaaggaatttacgagggattttattttttccgtcactaattt 9024323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 46 - 113
Target Start/End: Original strand, 18413556 - 18413623
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgac 113  Q
    |||| ||||||||||||| || ||||||| |||| ||||||| ||||||||||  |||||||| ||||    
T  18413556 ttagtgagggaaatttagagagggaaaacgtgaattccctttttaattccgtcgttaaattttacgac 18413623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 6e-47; HSPs: 75)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 56 - 175
Target Start/End: Complemental strand, 50845459 - 50845340
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||    
T  50845459 aaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaattt 50845360  T
Q  156 ccctccctaattttgctttt 175  Q
    ||||||||||||||||||||    
T  50845359 ccctccctaattttgctttt 50845340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 14760867 - 14760996
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  14760867 ttagtgagggaaatttagtgagggaaaacatgaaatccctcactaattccgtcactaaattttgcgaccaaagaatttgtgaggaattttatgttttccg 14760966  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||||||||||||||  |||||||||||||    
T  14760967 tcacaaatttccctctttaattttgctttt 14760996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 46 - 185
Target Start/End: Original strand, 13102316 - 13102455
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| ||||||||| ||||| |||| |||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||    
T  13102316 ttagtgagggaaatttagtgagggaaaacataaaatctctttctaattccgtcactaaattttgcgaccaaggaatttgtgatgaattttatgttttccg 13102415  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtg 185  Q
     ||||||||||||||| |||||||||||||| || |||||    
T  13102416 tcacaaatttccctccttaattttgcttttcctagtagtg 13102455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 12720809 - 12720938
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||    
T  12720809 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttattttttccg 12720908  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  12720909 tcactaatttccctcgctaattttgctttt 12720938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 46 - 185
Target Start/End: Original strand, 7830031 - 7830170
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| ||||||||||||||||||   ||||| |||||||||||||||||||||| |||||| |||| |||||||||||||||     
T  7830031 ttagtgagggaaatttagtgagggaaaacatgaaatccctccctaatttcgtcactaaattttgcgaccaaggaatttgtgagaaattttatgttttcca 7830130  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtg 185  Q
     || ||||||||||||||||||||||||||| || |||||    
T  7830131 tcataaatttccctccctaattttgcttttcctagtagtg 7830170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 6459217 - 6459346
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  6459217 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 6459316  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||| ||||||    
T  6459317 tcactaatttccctcgctaatttcgctttt 6459346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 9110114 - 9109985
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||||| || |||||||    
T  9110114 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccg 9110015  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  9110014 tcactaatttccctcgctaattttgctttt 9109985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 45839292 - 45839421
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  45839292 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 45839391  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| ||||||||||  |||||||||||||    
T  45839392 tcactaatttccctcgttaattttgctttt 45839421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 46 - 188
Target Start/End: Complemental strand, 18895039 - 18894897
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||| ||||||||||| |||||||||||||||||| | ||||| ||||||||||||||||||||||||||| | ||||| ||||||| |||| ||    
T  18895039 ttagtgaggaaaatttagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatatgtgaggtattttatttttttcg 18894940  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtgtaa 188  Q
     ||| ||||| |||| ||||||||||||||| || ||||||||    
T  18894939 tcactaattttcctcgctaattttgcttttcctagtagtgtaa 18894897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 6412192 - 6412063
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||||| || |||||||    
T  6412192 ttagtgagggatatttagtgagggaaaacatgaaatccctctttaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccg 6412093  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
      || |||||||||| ||||||||||||||    
T  6412092 ttactaatttccctcgctaattttgctttt 6412063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 41752433 - 41752562
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| |||  |||||||| |||||||    
T  41752433 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaaaaattttattttttccg 41752532  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| ||||||| || ||||||||||||||    
T  41752533 tcactaatttccgtcactaattttgctttt 41752562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 60 - 175
Target Start/End: Original strand, 46790014 - 46790129
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||| | |||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||| || ||||||| ||| |||||||||    
T  46790014 ttagtgagggaaaacgtaaaatccctttctaattccgtcattaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 46790113  T
Q  160 ccctaattttgctttt 175  Q
    | ||||||||||||||    
T  46790114 cgctaattttgctttt 46790129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 56 - 186
Target Start/End: Original strand, 4340417 - 4340547
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||||||| ||||||| | |||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || ||||||| ||| |||||    
T  4340417 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 4340516  T
Q  156 ccctccctaattttgcttttcttaatagtgt 186  Q
    ||||  ||||||||||||||  |||||||||    
T  4340517 cccttgctaattttgctttttctaatagtgt 4340547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 46 - 176
Target Start/End: Complemental strand, 16913716 - 16913586
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||||| || |||||||||||||||||| | ||||||||| | |||||||| |||| || |||||| ||||||||||||| |||||||    
T  16913716 ttagtgagggaaatttagagagggaaaacatgaaatccctctctaattccgttattaaattttacgactaaggaatttgtgaggaattttattttttccg 16913617  T
Q  146 acacaaatttccctccctaattttgcttttc 176  Q
     ||| ||||||||| ||||||||||||||||    
T  16913616 tcactaatttcccttcctaattttgcttttc 16913586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 46 - 160
Target Start/End: Complemental strand, 41071974 - 41071860
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| ||||||| | |||||||| | ||||||||||||||||||||||||||||||||||| |||||||||| || || ||||    
T  41071974 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttctccg 41071875  T
Q  146 acacaaatttccctc 160  Q
     ||| ||||||||||    
T  41071874 tcactaatttccctc 41071860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 9464103 - 9464232
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||||||||||  |||||| |||||||||| || |||||||    
T  9464103 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccg 9464202  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| ||||||| || |||||||| |||||    
T  9464203 tcactaatttccgtcactaattttactttt 9464232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 15243085 - 15243214
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| ||||||| |||||||||| | |||||||||||||||||||||||| ||| |||||| |||||||||| || |||||||    
T  15243085 ttagtgagggaaatttagtgagggaaaacgtgaaatccctatctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttccg 15243184  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||| ||| || ||||| |||||    
T  15243185 tcactaatttctctcgctgatttttctttt 15243214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 20408299 - 20408170
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | ||||||||| |||||||||||||||||  |||||| |||||||||| || |||||||    
T  20408299 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgttactaaattttgcgaccatggaatttgtgaggaatttcattttttccg 20408200  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| ||||| |||| ||||||||||||||    
T  20408199 tcactaattttcctcgctaattttgctttt 20408170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 22603548 - 22603677
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| ||||||| | ||||| || | |||||||||||||||||||||||| |||||||||| |||||||||| || ||||||     
T  22603548 ttagtgagggaaatttagtgagggaaaacgtaaaatcgctctctaattccgtcactaaattttgcgatcaaagaatttgtgaggaatttcattttttcca 22603647  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||  ||||||||||||||    
T  22603648 tcactaatttcccttgctaattttgctttt 22603677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 29549418 - 29549547
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| ||||||| | |||||||| | ||||||||||||||||||| ||||| ||| ||||| |||| |||||||| |||| ||    
T  29549418 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaatttcgcgactaaaaaatttgtgagaaattttatttttttcg 29549517  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  29549518 tcactaatttccctcgctaattttgctttt 29549547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 38531309 - 38531180
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||||| || ||||||| ||||||| || | ||||||| ||||||||||||||||| || |||||| ||||||||||||| |||||||    
T  38531309 ttagtgagggaaatttagagagggaaaacgtgaaatctctctctaattccatcactaaattttgcgactaaggaatttgtgaggaattttattttttccg 38531210  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     |||  |||||||||||||||||| |||||    
T  38531209 tcacttatttccctccctaattttactttt 38531180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 52183678 - 52183807
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||||||||||   ||||| ||||||||||||| |||||||    
T  52183678 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaattttattttttccg 52183777  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||  ||||||||||  |||||||||||||    
T  52183778 tcattaatttccctcgttaattttgctttt 52183807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 51 - 175
Target Start/End: Complemental strand, 46339579 - 46339455
Alignment:
Q  51 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 150  Q
    |||||| ||||||| | ||||||||||||||| || | ||||||||||||||||||||||||| || |||||| |||||||||| || ||||||| |||     
T  46339579 gagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcact 46339480  T
Q  151 aatttccctccctaattttgctttt 175  Q
    ||||| |||| ||||||||||||||    
T  46339479 aattttcctcgctaattttgctttt 46339455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 60 - 191
Target Start/End: Complemental strand, 13308945 - 13308814
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| | |||||||||||||||| | ||||| | ||||||||||||||||||||  ||||| ||||||||||||| ||||| ||||| |||||||||    
T  13308945 ttagtgaggaaaaacatgaaatccctctctaatttcatcactaaattttgcgaccaataaatttgtgaggaattttattttttcggacactaatttccct 13308846  T
Q  160 ccctaattttgcttttcttaatagtgtaataa 191  Q
    | ||||||||| ||||| || ||||| |||||    
T  13308845 ctctaattttgtttttcctagtagtgaaataa 13308814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 60 - 175
Target Start/End: Original strand, 19865258 - 19865373
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| |||| ||||| || ||||||| ||| ||||| |||    
T  19865258 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaattttcct 19865357  T
Q  160 ccctaattttgctttt 175  Q
    | |||||||| |||||    
T  19865358 cgctaattttactttt 19865373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 46 - 169
Target Start/End: Complemental strand, 22789730 - 22789607
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||||| || ||||||| ||||||| || | |||||| ||||||||||||||||||||  |||||| |||| ||||||||||||||||    
T  22789730 ttagtgagggaaatttagagagggaaaacgtgaaatctctatctaattcagtcactaaattttgcgaccatggaatttgtgagaaattttatgttttccg 22789631  T
Q  146 acacaaatttccctccctaatttt 169  Q
     ||| ||||| |||||||||||||    
T  22789630 tcactaattttcctccctaatttt 22789607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 28229580 - 28229465
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||| | |||||||| | ||||||| |||||||||||||||||||| |||||| |||||||||| || ||||||| ||| |||||||||    
T  28229580 ttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 28229481  T
Q  160 ccctaattttgctttt 175  Q
    | ||||||||||||||    
T  28229480 cgctaattttgctttt 28229465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 56 - 175
Target Start/End: Complemental strand, 41120866 - 41120747
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||||||| ||||||| | |||||||| | ||||||||||||||||||||||||||||  ||||| |||||||||| || ||||||  ||| |||||    
T  41120866 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccatcactaattt 41120767  T
Q  156 ccctccctaattttgctttt 175  Q
    ||||| ||||||||||||||    
T  41120766 ccctcgctaattttgctttt 41120747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 22158802 - 22158931
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||||||||||   ||||| |||||||||| || ||||| |    
T  22158802 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttctg 22158901  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| |||||||| |||||    
T  22158902 tcactaatttccctcgctaattttactttt 22158931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 48522518 - 48522647
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| || |||||| |||||||||||||| ||| |  |||||||||||||||||||||||||||| ||||| |||| |||||||| ||||| |    
T  48522518 ttagtgagggatatgtagtgagggaaaacatgaaattcctcttaaattccgtcactaaattttgcgaccaaaaaatttgtgagaaattttattttttctg 48522617  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| ||||| |||| ||||||||||||||    
T  48522618 tcactaattttcctcgctaattttgctttt 48522647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 51 - 175
Target Start/End: Original strand, 51973429 - 51973553
Alignment:
Q  51 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 150  Q
    ||||||||||| |||| ||||||  ||||||  || | ||||||||||||||||||||||||||| ||| |||||||||||||| || |||||||  ||     
T  51973429 gagggaaattttgtgagggaaaatgtgaaatttctctctaattccgtcactaaattttgcgaccatagattttatgaggaatttcattttttccgttact 51973528  T
Q  151 aatttccctccctaattttgctttt 175  Q
    |||||||||| ||||||||||||||    
T  51973529 aatttccctcgctaattttgctttt 51973553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 46 - 185
Target Start/End: Original strand, 17661050 - 17661189
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||| |||||| ||| | ||||||| |||||||||||||||||||   ||||| ||||||||||||| |||||||    
T  17661050 ttagtgagggaaattttgtgagggaaaacgtgaaattcctctctaattccatcactaaattttgcgaccatgaaatttgtgaggaattttattttttccg 17661149  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtg 185  Q
     ||| ||||||| ||  |||||||||||||  ||||||||    
T  17661150 tcactaatttccgtcgttaattttgctttttctaatagtg 17661189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 46 - 185
Target Start/End: Original strand, 19081728 - 19081867
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||| ||||| || ||||||| |||||||||| | |||||| ||||||||||||| ||||||| |||||| |||| |||||||| ||||||     
T  19081728 ttagtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttacgaccaaggaatttgtgagaaattttattttttcca 19081827  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtg 185  Q
     ||| |||||||||| |||||||| ||||| ||| |||||    
T  19081828 tcactaatttccctctctaattttactttttttagtagtg 19081867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 46 - 185
Target Start/End: Original strand, 19129616 - 19129755
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||| ||||| || ||||||| |||||||||| | |||||| ||||||||||||| ||||||| |||||| |||| |||||||| ||||||     
T  19129616 ttagtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttacgaccaaggaatttgtgagaaattttattttttcca 19129715  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtg 185  Q
     ||| |||||||||| |||||||| ||||| ||| |||||    
T  19129716 tcactaatttccctctctaattttactttttttagtagtg 19129755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 56 - 175
Target Start/End: Complemental strand, 46786087 - 46785968
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||||||| ||||||| | |||||||| | ||||||||||| |||||||||||||||| ||| || |||| ||||| || ||||||| ||| |||||    
T  46786087 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgaccaaggaacttgtgagaaatttcattttttccgtcactaattt 46785988  T
Q  156 ccctccctaattttgctttt 175  Q
    ||||| ||||||||||||||    
T  46785987 ccctcgctaattttgctttt 46785968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 9985466 - 9985337
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| | ||||| | |||||||| | ||||||||||| |||||||| |||||||||||||| |||||||||| || |||||||    
T  9985466 ttagtgagggaaattttgtgaggaaaaacgtaaaatccctctctaattccgtcaataaattttacgaccaaagaatttgtgaggaatttgattttttccg 9985367  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||  ||||||||| ||||    
T  9985366 tcactaatttcccttgctaattttgttttt 9985337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 12161814 - 12161943
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||||||||||   ||||| |||||||||| || |||||||    
T  12161814 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccg 12161913  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||  ||||| |||| |||||||| |||||    
T  12161914 tcaataattttcctcgctaattttactttt 12161943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 17200149 - 17200020
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| | |||| || |||| | | | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  17200149 ttagtgagggaaatttagtgaggaaaaatataaaattcttctttaattccgtcactaaattttgcgaccaatgaatttgtgaggaatttcattttttccg 17200050  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     |||  ||||||||| ||||||||| ||||    
T  17200049 tcactgatttccctcgctaattttgttttt 17200020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 18890688 - 18890559
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| ||||  |||||| |||||||||| | ||||||||| |||||||||||||||||   ||||| |||||||||| || ||||||     
T  18890688 ttagtgagggaaattttgtgagagaaaacgtgaaatccctctctaattccgttactaaattttgcgaccattaaatttgtgaggaatttcattttttcca 18890589  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  18890588 tcactaatttccctcgctaattttgctttt 18890559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 23457897 - 23458026
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||||||||||   ||||| |||||||||| || |||||||    
T  23457897 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccg 23457996  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||  ||||| |||| |||||||| |||||    
T  23457997 tcaataattttcctcgctaattttactttt 23458026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 51 - 143
Target Start/End: Complemental strand, 12174900 - 12174808
Alignment:
Q  51 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttc 143  Q
    |||||| ||||||||| |||||||||||||||| | | ||||||||||||||||||||||||| || |||||| ||||||||||||| |||||    
T  12174900 gagggatatttagtgagggaaaacatgaaatccttctctaattccgtcactaaattttgcgacgaaggaatttgtgaggaattttattttttc 12174808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 55 - 175
Target Start/End: Complemental strand, 50092428 - 50092308
Alignment:
Q  55 gaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatt 154  Q
    ||||||| |||| |||||||||||||||||| | ||||||||||||||||||||| || ||   ||||| |||||||||| || ||||||| ||| ||||    
T  50092428 gaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgatcatgaaatttgtgaggaatttcattttttccgtcactaatt 50092329  T
Q  155 tccctccctaattttgctttt 175  Q
    |||||| |||||||| |||||    
T  50092328 tccctcgctaatttttctttt 50092308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 46 - 185
Target Start/End: Original strand, 12989852 - 12989991
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| | || ||||||| ||||||| ||   |||||| ||||||||| ||||||||||| |||||| |||| |||||||| |||||||    
T  12989852 ttagtgagggaaattttgagagggaaaacgtgaaatctctccctaattcagtcactaaactttgcgaccaaggaatttgtgagaaattttattttttccg 12989951  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtg 185  Q
     ||| |||||| ||| |||||||||||||| ||| |||||    
T  12989952 tcaccaatttctctctctaattttgctttttttagtagtg 12989991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 46 - 188
Target Start/End: Complemental strand, 7181694 - 7181552
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| || | ||||||| |||||||||| | ||||||||||||||||||||| |||||   ||| | ||||||||||| | |||||||    
T  7181694 ttagtgagggaaattttgtaagggaaaacgtgaaatccctctctaattccgtcactaaattttgtgaccatgaaatatgtgaggaattttcttttttccg 7181595  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtgtaa 188  Q
     ||| |||||||||  ||||||||||||||  || ||||||||    
T  7181594 tcactaatttcccttgctaattttgctttttctagtagtgtaa 7181552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 46 - 144
Target Start/End: Complemental strand, 13523100 - 13523002
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttcc 144  Q
    |||| ||||||| ||||| || ||||||| |||||||||| | ||||||||||||||||||||||||||||||||||| |||| |||| ||| ||||||    
T  13523100 ttagtgagggaattttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagaaattatattttttcc 13523002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 77 - 175
Target Start/End: Complemental strand, 25788105 - 25788007
Alignment:
Q  77 gaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 175  Q
    ||||||||| | |||||||||||||||||||||||||||  |||||| ||||||||||| | ||||||| ||| ||||| |||| ||||||||||||||    
T  25788105 gaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaattttcttttttccgtcactaattttcctcgctaattttgctttt 25788007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 41063197 - 41063326
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||| ||||||||||| | ||||||| ||||| || | |||||||||||||||||||||||| |||||||| | ||||| ||||||| |||||||    
T  41063197 ttagtgaggaaaatttagtgaggaaaaacataaaatctctctctaattccgtcactaaattttgcgatcaaagaatatgtgagggattttattttttccg 41063296  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| ||||| ||| | ||||||| |||||    
T  41063297 tcactaattttccttcttaattttactttt 41063326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 56 - 175
Target Start/End: Original strand, 9177110 - 9177229
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||||||| | ||||| | |||||||| | ||||| ||||||||||||||||||||||  ||||| |||||||||| || |||||||  || |||||    
T  9177110 aaatttagtgaggaaaaacgtaaaatccctctttaatttcgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgttactaattt 9177209  T
Q  156 ccctccctaattttgctttt 175  Q
    ||||| ||||||||| ||||    
T  9177210 ccctcgctaattttgttttt 9177229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 59 - 186
Target Start/End: Original strand, 11917799 - 11917925
Alignment:
Q  59 tttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccc 158  Q
    ||||| || ||||||| |||| ||||||| ||||||||||||||||||||||||||||| ||||| ||||  ||||| | |||| || |||  |||||||    
T  11917799 tttagagagggaaaacgtgaactccctttctaattccgtcactaaattttgcgaccaaataatttgtgagatattttgt-tttttcgtcactgatttccc 11917897  T
Q  159 tccctaattttgcttttcttaatagtgt 186  Q
    || |||||||| |||||| |||||||||    
T  11917898 tctctaatttttcttttcctaatagtgt 11917925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 46 - 176
Target Start/End: Complemental strand, 30928517 - 30928387
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||| ||||||| |||  |||||||||||||  || | ||||||  |||||||||||||||||||| |||||| | ||  ||||||| |||||||    
T  30928517 ttagtgaggaaaatttactgagtgaaaacatgaaatttctctctaattctctcactaaattttgcgaccaaggaatttgttagagattttattttttccg 30928418  T
Q  146 acacaaatttccctccctaattttgcttttc 176  Q
     ||| |||||||||| |||||||||||||||    
T  30928417 tcactaatttccctctctaattttgcttttc 30928387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 60 - 145
Target Start/End: Original strand, 41359001 - 41359087
Alignment:
Q  60 ttagtgaaggaaaacatgaaa-tccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    ||||||| ||||||||| ||| ||||| | ||||||||||||||||||||||||||||||||||| |||||||||| || |||||||    
T  41359001 ttagtgagggaaaacataaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccg 41359087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 9259322 - 9259193
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||| ||||||| || | |||||||||||||||||||||||||||   ||||| |||| |||||| | |||||||    
T  9259322 ttagtgagggaaattttgtgagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccatgaaatttgtgagaaattttcttttttccg 9259223  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| ||||| ||||  |||||||| ||||    
T  9259222 tcactaattttcctcgttaattttgttttt 9259193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 12370080 - 12370003
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaattt 123  Q
    |||| |||||||||||||| | ||||||||| |||||| | | |||||||||||||||||||||||||||||||||||    
T  12370080 ttagtgagggaaatttagtaagggaaaacataaaatccttctctaattccgtcactaaattttgcgaccaaagaattt 12370003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 56 - 185
Target Start/End: Original strand, 39748943 - 39749072
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    |||||||||||||||||||||||||||||  |  |||| |||||||||||||||||| |||| || ||  |||  ||||| | ||||||| ||| |||||    
T  39748943 aaatttagtgaaggaaaacatgaaatccccctcaaatttcgtcactaaattttgcgatcaaacaaattgcgagagatttttttttttccgtcactaattt 39749042  T
Q  156 ccctccctaattttgcttttcttaatagtg 185  Q
    | |||| |||||||||||||| || |||||    
T  39749043 cgctccttaattttgcttttcctagtagtg 39749072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 46865243 - 46865372
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||| || || ||| ||| |||||||||| | ||||||| | ||||||||||||| ||||  ||||| ||||| ||||||| |||||||    
T  46865243 ttagtgagggaaattcagagagggagaacgtgaaatccctctctaattccattactaaattttgcggccaagaaatttgtgagggattttattttttccg 46865342  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||||||| |||| |||||    
T  46865343 tcactaatttccctccctagtttttctttt 46865372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 70 - 185
Target Start/End: Complemental strand, 12806952 - 12806836
Alignment:
Q  70 aaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgag-gaattttatgttttccgacacaaatttccctccctaattt 168  Q
    ||||| |||||||||| |||||||||||||||||||||| |||||||  ||||| |||| || || | | ||||| | ||| |||||||||||||||| |    
T  12806952 aaaacttgaaatccctctataattccgtcactaaattttacgaccaagaaatttgtgagagatttattttttttctgtcactaatttccctccctaatat 12806853  T
Q  169 tgcttttcttaatagtg 185  Q
    |||||||| ||||||||    
T  12806852 tgcttttcctaatagtg 12806836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 8941119 - 8941004
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||| | |||| ||| | |||||||||| ||||||||| ||| ||| |||||| |||| ||||| || ||||||| ||| |||||||||    
T  8941119 ttagtgagggaaaacgtaaaattcctctctaattccgtcgctaaattttacgatcaaggaatttgtgagaaatttcattttttccgtcactaatttccct 8941020  T
Q  160 ccctaattttgctttt 175  Q
    | ||||||||||||||    
T  8941019 cgctaattttgctttt 8941004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 46 - 176
Target Start/End: Complemental strand, 17734093 - 17733962
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaa-ttttgcgaccaaagaatttatgaggaattttatgttttcc 144  Q
    |||| |||||||||||||||| ||||||||||||||| ||   ||||||| ||| |||| ||||||||||||  ||||| ||||  ||||||| ||||||    
T  17734093 ttagtgagggaaatttagtgagggaaaacatgaaatctctcgctaattccatcattaaatttttgcgaccaagaaatttgtgagagattttatcttttcc 17733994  T
Q  145 gacacaaatttccctccctaattttgcttttc 176  Q
    | ||| || ||  |||||||||||||||||||    
T  17733993 gtcactaaattttctccctaattttgcttttc 17733962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 89 - 175
Target Start/End: Complemental strand, 27253951 - 27253865
Alignment:
Q  89 taattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 175  Q
    |||||||||||||||||||||||||||  |||||| |||| |||||||| ||||||| ||  ||||| ||||||||||||| |||||    
T  27253951 taattccgtcactaaattttgcgaccatggaatttgtgagaaattttattttttccgtcattaattttcctccctaatttttctttt 27253865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 46 - 155
Target Start/End: Original strand, 32046876 - 32046985
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||| |||||| ||||||| | ||||| || | |||||||| |||||||||||||||||||  ||||| |||||||||| || |||||||    
T  32046876 ttagtgagggaaatatagtgagggaaaacgtaaaatctctctctaattccgacactaaattttgcgaccaagaaatttgtgaggaatttcattttttccg 32046975  T
Q  146 acacaaattt 155  Q
     ||| |||||    
T  32046976 tcactaattt 32046985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 96 - 175
Target Start/End: Complemental strand, 18788001 - 18787923
Alignment:
Q  96 gtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 175  Q
    |||||||||||||||||||||| |||||| |||| ||||||| |||| || ||| ||||||| |||||||||||||||||    
T  18788001 gtcactaaattttgcgaccaaaaaatttaggagggattttat-tttttcgtcactaatttccatccctaattttgctttt 18787923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 52 - 175
Target Start/End: Original strand, 26825246 - 26825369
Alignment:
Q  52 agggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaa 151  Q
    |||||| ||||| || ||||||| |||||| ||| | |||||||||||||||||||| ||| |||||||||| ||||| |  |||| ||||||| ||| |    
T  26825246 agggaattttagagagggaaaacgtgaaattcctctctaattccgtcactaaattttacgatcaaagaatttgtgagggaagttattttttccgtcacta 26825345  T
Q  152 atttccctccctaattttgctttt 175  Q
    |||| | ||| ||| |||||||||    
T  26825346 attttcttccataactttgctttt 26825369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 176
Target Start/End: Complemental strand, 16258625 - 16258495
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||| |||||||| || | ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||| | ||||  |||||||  ||||||    
T  16258625 ttagtgaggaaaatttagagaggaaaaacgtgaaaaccctctataattccgtcactaaattttgcaaccaaggaatctgtgagatattttattctttccg 16258526  T
Q  146 acacaaatttccctccctaattttgcttttc 176  Q
     ||| || || | ||| ||||||||||||||    
T  16258525 ccactaaattacatccttaattttgcttttc 16258495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 51 - 171
Target Start/End: Original strand, 13195588 - 13195708
Alignment:
Q  51 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 150  Q
    ||||||||||||| || ||||||    |||||||| | |||||| |||||||||||||||| || | |||||  ||||||||||||  ||||||  |||     
T  13195588 gagggaaatttagagagggaaaatgcaaaatccctctctaattctgtcactaaattttgcgtcccaggaattcgtgaggaattttaacttttccatcact 13195687  T
Q  151 aatttccctccctaattttgc 171  Q
    ||| |||||||||||||||||    
T  13195688 aatctccctccctaattttgc 13195708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 20290459 - 20290331
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||| ||||||| ||||  |||||| |||||||  | | |||||||||||||||||||| || |||   ||||| |||||||||| || |||||||    
T  20290459 ttagtgagagaaattttgtgagagaaaacgtgaaatcattctctaattccgtcactaaattttacggccatgaaatttgtgaggaatttcat-ttttccg 20290361  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| |||||||| |||||    
T  20290360 tcactaatttccctcgctaattttactttt 20290331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 185
Target Start/End: Original strand, 49881058 - 49881182
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||| |||||||||||||| | |||| | || ||||||||||| |||||| ||||||||||   ||||||| ||||||| ||| || || |||    
T  49881058 ttagtgagggataacatgaaatccctctctaatcctgttactaaattttgtgaccaaggaatttatgaaagattttattttttccgtcactaactttcct 49881157  T
Q  160 ccctaattttgcttttcttaatagtg 185  Q
     ||||||||||| |||| ||| ||||    
T  49881158 -cctaattttgcatttcctaacagtg 49881182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 55 - 175
Target Start/End: Original strand, 6775896 - 6776015
Alignment:
Q  55 gaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatt 154  Q
    ||||||||||||   ||||| | |||| ||| | |||||||||  |||| |||||| |||||||||||| ||||| ||||||| ||||||  |||  |||    
T  6775896 gaaatttagtgagaaaaaacttaaaattcctctctaattccgttgctaagttttgcaaccaaagaatttgtgagggattttattttttccatcac-tatt 6775994  T
Q  155 tccctccctaattttgctttt 175  Q
    |||||| ||||||||||||||    
T  6775995 tccctctctaattttgctttt 6776015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 46 - 185
Target Start/End: Original strand, 20580909 - 20581049
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaatttta-tgttttcc 144  Q
    |||| ||| ||| ||||| || ||||||| |||||||||| | ||||| ||| | ||||||||||||| || |||||| |||| ||||| | | ||||||    
T  20580909 ttagtgagagaattttagagagggaaaacgtgaaatccctctctaatttcgtaattaaattttgcgactaaggaatttgtgagaaatttaatttttttcc 20581008  T
Q  145 gacacaaatttccctccctaattttgcttttcttaatagtg 185  Q
      ||| |||||||||| |||||||| ||||| ||| |||||    
T  20581009 atcactaatttccctctctaattttactttttttagtagtg 20581049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 61 - 176
Target Start/End: Complemental strand, 45919028 - 45918913
Alignment:
Q  61 tagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaatttta-tgttttccgacacaaatttccct 159  Q
    |||||| ||| ||||| |||||||| | |||||| || |||||||||||| ||||| |||||||||||| |||| | | ||||||| ||||| ||| |||    
T  45919028 tagtgagggataacatcaaatccctctctaattctgttactaaattttgcaaccaaggaatttatgagggatttcatttttttccgtcacaagttttcct 45918929  T
Q  160 ccctaattttgcttttc 176  Q
     ||||||||||| ||||    
T  45918928 -cctaattttgcatttc 45918913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 46 - 119
Target Start/End: Complemental strand, 14486771 - 14486698
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaaga 119  Q
    |||| |||| |||||||| || ||||||| ||||||| || | ||||||||||||| |||||||||| ||||||    
T  14486771 ttagtgaggaaaatttagagagggaaaacgtgaaatctctctctaattccgtcactgaattttgcgatcaaaga 14486698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 25687410 - 25687355
Alignment:
Q  55 gaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgc 110  Q
    ||||||||| |||||||||||| | |||||| | ||||||| ||||||||||||||    
T  25687410 gaaatttagagaaggaaaacattacatccctctctaattccttcactaaattttgc 25687355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 144
Target Start/End: Original strand, 52621154 - 52621252
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttcc 144  Q
    |||| |||| ||||||||||| | |||||||||||| | |   ||||||| ||||||||||||  ||| ||| ||||||||||  ||||||| ||||||    
T  52621154 ttagtgaggaaaatttagtgaggaaaaacatgaaattcttcactaattccatcactaaattttatgactaaataatttatgagagattttattttttcc 52621252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 155
Target Start/End: Complemental strand, 9882162 - 9882070
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||| | ||||||| |||| ||| | |||||||||||||||||||||||   ||  ||||| ||||| ||||||| ||||||| ||| |||||    
T  9882162 ttagtgaggaaaaacattaaattcctctctaattccgtcactaaattttgcg---aagaaatttgtgagggattttattttttccgtcactaattt 9882070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 143
Target Start/End: Complemental strand, 29093693 - 29093596
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttc 143  Q
    |||| ||||||||||||| || ||||||  | |||| ||| | ||||||| ||| ||||||||||||  || ||| || ||||||||||||| |||||    
T  29093693 ttagtgagggaaatttagagatggaaaatgtaaaattcctctctaattccatcattaaattttgcgattaaggaacttgtgaggaattttattttttc 29093596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 30673504 - 30673585
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttat 137  Q
    ||||||||||| |||||||||||||||||| | ||||||  | ||||||||||  || |||| ||||| ||| | |||||||    
T  30673504 aaatttagtgagggaaaacatgaaatccctctctaattctattactaaattttatgagcaaaaaatttgtgaaggattttat 30673585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 46 - 176
Target Start/End: Original strand, 10158 - 10288
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||| ||| |||||||||||||||||| | ||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||    
T  10158 ttagtgagggaaatttactgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgattaaagaatttgtgaggaattttatgttttccg 10257  T
Q  146 acacaaatttccctccctaattttgcttttc 176  Q
     ||||||||||||||||||||||||||||||    
T  10258 tcacaaatttccctccctaattttgcttttc 10288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 79; Significance: 8e-37; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 1058 - 928
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaatttta-tgttttcc 144  Q
    |||| |||||| ||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||    
T  1058 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttatgaggaattttatttttttcc 959  T
Q  145 gacacaaatttccctccctaattttgctttt 175  Q
    | ||  |||||||||| ||||||||||||||    
T  958 gtcagtaatttccctcgctaattttgctttt 928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 7505 - 7634
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| ||||||| | |||||||| | ||||||||||||||||||||||||||||  |||||||||||||||| || |||||||    
T  7505 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaatttcatattttccg 7604  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  7605 tcactaatttccctcgctaattttgctttt 7634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 19603 - 19732
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  19603 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 19702  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||  ||||||||||||||    
T  19703 tcactaatttcccttgctaattttgctttt 19732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 74; Significance: 8e-34; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 9368 - 9239
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| ||||||| | |||||| | | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  9368 ttagtgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 9269  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  9268 tcactaatttccctcactaattttgctttt 9239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 74; Significance: 8e-34; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 12653 - 12781
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||| |||| ||||| | ||||||||||||||||||||||||||| |||||||||||||||||| || |||||||    
T  12653 ttagtgagggaaattttgtgagggaaaacgtgaa-tccctctctaattccgtcactaaattttgcgaccatagaatttatgaggaatttcattttttccg 12751  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  12752 tcactaatttccctcgctaattttgctttt 12781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 74; Significance: 8e-34; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 26483 - 26612
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||||||| ||||||| | |||||||| | ||||||||||||||||||||||||||||||||||| |||||||||| || |||||||    
T  26483 ttagtgagggacatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccg 26582  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| ||||||| || ||||||||||||||    
T  26583 tcactaatttccgtcactaattttgctttt 26612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 74; Significance: 8e-34; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 8249 - 8120
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| | |||||||| || |||||||    
T  8249 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgttaggaatttcattttttccg 8150  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||  |||||||||| ||||||||||||||    
T  8149 tcattaatttccctcgctaattttgctttt 8120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 21981 - 21852
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||| ||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| | |||||||| || |||||||    
T  21981 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgttaggaatttcattttttccg 21882  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||  |||||||||| ||||||||||||||    
T  21881 tcattaatttccctcgctaattttgctttt 21852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 84303 - 84432
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| ||||||  |||||||||| | ||||||||||||||||||||| |||||   ||||| |||||||||| || |||||||    
T  84303 ttagtgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgtgaccatgaaatttgtgaggaatttcattttttccg 84402  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||  ||||||||||||||    
T  84403 tcactaatttcccttgctaattttgctttt 84432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 73; Significance: 3e-33; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 51 - 175
Target Start/End: Original strand, 3747 - 3871
Alignment:
Q  51 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 150  Q
    |||||||||||||||| ||||||| | |||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || ||||||| |||     
T  3747 gagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcact 3846  T
Q  151 aatttccctccctaattttgctttt 175  Q
    ||||| |||| ||||||||||||||    
T  3847 aattttcctcgctaattttgctttt 3871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 202774 - 202903
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||| ||||||||||| ||||||| | |||| ||| | |||||||||||||||||||||||||||| |||||| |||| ||||| || |||||||    
T  202774 ttagtgaggaaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgagcaatttcattttttccg 202873  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| |||||||| |||||    
T  202874 tcactaatttccctcgctaatttttctttt 202903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 46 - 112
Target Start/End: Complemental strand, 276273 - 276207
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcga 112  Q
    |||| ||||||||||| ||||  |||||| |||||||||| | ||||||||||||||||||||||||    
T  276273 ttagtgagggaaattttgtgagagaaaacgtgaaatccctctctaattccgtcactaaattttgcga 276207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 46 - 185
Target Start/End: Original strand, 10892 - 11031
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||| ||| | |||||||||||| ||| | |||||| |||||||||||||| |||||| |||||| ||||||||||||| |||| ||    
T  10892 ttagtgagggaaatttactgaggaaaaacatgaaattcctctctaattctgtcactaaattttgtgaccaaggaatttgtgaggaattttatatttttcg 10991  T
Q  146 acacaaatttccctccctaattttgcttttcttaatagtg 185  Q
     ||||||||||| |||||||||||||||||| ||| ||||    
T  10992 tcacaaatttccttccctaattttgcttttcctaacagtg 11031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 6118 - 5989
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||||||| ||||||| | |||||||| | ||||||| |||||||||||||||||||| |||||| |||||||||| || |||||||    
T  6118 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 6019  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||| ||||    
T  6018 tcactaatttccctcgctaattttgttttt 5989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 37926 - 37797
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| ||||||||||| |||| |||||||||||||||||| | ||||||||||||||||||||||||||| | ||||| ||||||||||||| |||||||    
T  37926 ttagtgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccataaaatttgtgaggaattttattttttccg 37827  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| ||||||||   ||||||||| ||||    
T  37826 tcactaatttcccctgctaattttgttttt 37797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 56 - 175
Target Start/End: Complemental strand, 15119 - 15000
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||||||| ||||||| | |||||||| | ||||||||||||||||||||||||||||  |||||||||||||||| || ||||| | ||| |||||    
T  15119 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaatttcattttttcggtcactaattt 15020  T
Q  156 ccctccctaattttgctttt 175  Q
    ||||| ||||||||||||||    
T  15019 ccctcgctaattttgctttt 15000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 56 - 175
Target Start/End: Complemental strand, 10792 - 10673
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||||||| ||||||| | |||| ||| | ||||||||||||||||||||||||| || |||||| |||||||||| || ||||||| ||| |||||    
T  10792 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattt 10693  T
Q  156 ccctccctaattttgctttt 175  Q
    ||||| ||||||||||||||    
T  10692 ccctcgctaattttgctttt 10673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 56 - 175
Target Start/End: Original strand, 22221 - 22340
Alignment:
Q  56 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||||||| ||||||| | |||||||| | ||||||||||||||||||||||||| || |||||| |||||||||| || |||| || ||| |||||    
T  22221 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcatttttttcgtcactaattt 22320  T
Q  156 ccctccctaattttgctttt 175  Q
    ||||| ||||||||||||||    
T  22321 ccctcgctaattttgctttt 22340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 62; Significance: 1e-26; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 58 - 175
Target Start/End: Original strand, 219648 - 219765
Alignment:
Q  58 atttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttcc 157  Q
    ||||||||| |||||||||||||||||| | ||||||||| ||||||||||||||  ||| ||||| |||||||||| || ||||||| ||| |||||||    
T  219648 atttagtgagggaaaacatgaaatccctctctaattccgttactaaattttgcgattaaaaaatttgtgaggaatttcattttttccgtcactaatttcc 219747  T
Q  158 ctccctaattttgctttt 175  Q
     || ||||||||||||||    
T  219748 gtcgctaattttgctttt 219765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 78 - 175
Target Start/End: Original strand, 182562 - 182659
Alignment:
Q  78 aaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 175  Q
    |||||||| | |||||||||||||||||||||||||||| |||||| |||| ||||| || ||||||| ||| |||||||||| |||||||| |||||    
T  182562 aaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaatttccctcgctaattttactttt 182659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 106 - 185
Target Start/End: Complemental strand, 215742 - 215663
Alignment:
Q  106 tttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgcttttcttaatagtg 185  Q
    ||||||||||| |||||| |||||||||| || ||||||| | | |||||| ||| |||||||||||||| ||| |||||    
T  215742 tttgcgaccaaggaatttgtgaggaatttcattttttccgtcgctaatttctctcgctaattttgctttttttagtagtg 215663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 84799 - 84684
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||| | |||||||| | ||||||| |||||||||||||||||||| |||||| |||||||||| || ||||| | ||| |||||||||    
T  84799 ttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttctgtcactaatttccct 84700  T
Q  160 ccctaattttgctttt 175  Q
    | ||||||||||||||    
T  84699 cactaattttgctttt 84684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 51 - 185
Target Start/End: Complemental strand, 121121 - 120987
Alignment:
Q  51 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 150  Q
    ||||||| ||||| || ||||||| |||||||||| | ||||||||||||||||||||||||||||  ||||| |||| |||||||| |||| |   ||     
T  121121 gagggaattttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgagaaattttatttttttcataact 121022  T
Q  151 aatttccctccctaattttgcttttcttaatagtg 185  Q
    |||||||||| |||||||| ||||| ||| |||||    
T  121021 aatttccctctctaattttactttttttagtagtg 120987  T

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Target: scaffold0019 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 58 - 185
Target Start/End: Original strand, 173456 - 173584
Alignment:
Q  58 atttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaa--tttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||||| ||||||||| ||||| || | ||||||||||||||||||||||||||||||||  |||||||| ||||| || ||||||| ||| |||||    
T  173456 atttagtgagggaaaacataaaatcactctctaattccgtcactaaattttgcgaccaaagaatttttatgagaaatttcattttttccgtcactaattt 173555  T
Q  156 ccctccctaattttgcttttcttaatagtg 185  Q
     |||| ||||||||||||||  ||||||||    
T  173556 -cctcgctaattttgctttttctaatagtg 173584  T

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Target: scaffold0655 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 51 - 175
Target Start/End: Complemental strand, 3294 - 3172
Alignment:
Q  51 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 150  Q
    ||||||||||||| |  ||||||| ||||||||||   |||||| ||||||||||||||||||||   ||||| ||||||| ||||| ||||||| |||     
T  3294 gagggaaatttagag--ggaaaacgtgaaatccctcactaattctgtcactaaattttgcgaccatgaaatttgtgaggaactttatcttttccgtcact 3197  T
Q  151 aatttccctccctaattttgctttt 175  Q
    ||||||||||||||||||| |||||    
T  3196 aatttccctccctaatttttctttt 3172  T

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Target: scaffold0062 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 43917 - 44046
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||| ||||||||||| ||||||| | |||| | | | ||||||||| | ||||||||||||||||||||||| |||||||||| || ||||||     
T  43917 ttagtgaggaaaatttagtgagggaaaacgtaaaattcttctctaattccgttattaaattttgcgaccaaagaatttgtgaggaatttcattttttcca 44016  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| |||||||| |||||    
T  44017 tcactaatttccctcgctaatttttctttt 44046  T

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Target: scaffold0161 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 52 - 175
Target Start/End: Original strand, 6801 - 6924
Alignment:
Q  52 agggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaa 151  Q
    ||||||||||||||| |||||||||||||| ||| | ||||||||||| |||||||||| || ||  |||||  || |||||| || ||||||| ||  |    
T  6801 agggaaatttagtgagggaaaacatgaaattcctctctaattccgtcattaaattttgcaacgaagaaatttgcgaagaatttcattttttccgtcaata 6900  T
Q  152 atttccctccctaattttgctttt 175  Q
    ||||||||| ||||||||||||||    
T  6901 atttccctcgctaattttgctttt 6924  T

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Target: scaffold0035 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 58 - 171
Target Start/End: Complemental strand, 74845 - 74731
Alignment:
Q  58 atttagtgaaggaaaa-catgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttc 156  Q
    ||||||||| |||||| |||||||||||| | |||||| ||||||||||||| |||||| ||||||| |||| ||||| || ||||||| ||| ||||||    
T  74845 atttagtgagggaaaaacatgaaatccctctctaattctgtcactaaattttacgaccagagaatttgtgagaaatttcattttttccgtcactaatttc 74746  T
Q  157 cctccctaattttgc 171  Q
    |||  ||||||||||    
T  74745 ccttgctaattttgc 74731  T

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Target: scaffold0023 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 39842 - 39713
Alignment:
Q  46 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    |||| |||||||||||  ||| ||||||| ||||||| || | |||||||||||||||||||||| ||||   |||||  ||||||||| || ||||||     
T  39842 ttagtgagggaaattttatgagggaaaacgtgaaatctctctctaattccgtcactaaattttgcaaccatgaaatttgggaggaatttcattttttcca 39743  T
Q  146 acacaaatttccctccctaattttgctttt 175  Q
     ||| |||||||||| ||||||||||||||    
T  39742 tcactaatttccctcgctaattttgctttt 39713  T

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Target: scaffold0184 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 51 - 175
Target Start/End: Original strand, 7461 - 7585
Alignment:
Q  51 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 150  Q
    |||||||||||||||| ||||||| |||||||||| | |||||| ||||||||| |||||||| || || ||| ||| |||||| || ||||||| |||     
T  7461 gagggaaatttagtgagggaaaacgtgaaatccctctctaattctgtcactaaactttgcgactaaggattttgtgaagaatttcattttttccgtcact 7560  T
Q  151 aatttccctccctaattttgctttt 175  Q
    ||||| ||||  ||||||| |||||    
T  7561 aattttcctcgttaattttactttt 7585  T

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Target: scaffold0284 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 60 - 155
Target Start/End: Complemental strand, 1644 - 1549
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||| ||| ||||||||| |||| | |||||  || |||||||||||||||||| |||||||||||| ||||||| ||||||| ||| |||||    
T  1644 ttagtgagggataacatgaaacccctctctaattatgttactaaattttgcgaccaaggaatttatgagggattttattttttccgtcactaattt 1549  T

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Target: scaffold0011 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 175
Target Start/End: Complemental strand, 17705 - 17627
Alignment:
Q  97 tcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 175  Q
    |||||||| ||||||||||| |||||| |||||||||| || ||||||| ||| |||||||||| ||||||||| ||||    
T  17705 tcactaaagtttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgttttt 17627  T

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Target: scaffold0038 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 184
Target Start/End: Original strand, 22145 - 22228
Alignment:
Q  101 taaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgcttttcttaatagt 184  Q
    |||| ||||||| |||| |||||||||| |||||||| ||||||  ||| ||||||||||||| |||||| ||||| |||||||    
T  22145 taaagtttgcgatcaaaaaatttatgagaaattttattttttccctcactaatttccctccctgattttgtttttcctaatagt 22228  T

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Target: scaffold0002 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 175
Target Start/End: Original strand, 439977 - 440092
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 159  Q
    ||||||| ||||||  | |||||||| | |||||||||||||||||||||||| |||  ||||| |||||||||| || ||||||| ||| ||| | |||    
T  439977 ttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcattttttccgtcactaatattcct 440076  T
Q  160 ccctaattttgctttt 175  Q
      |||||||| |||||    
T  440077 tgctaattttactttt 440092  T

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Target: scaffold0114 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 60 - 155
Target Start/End: Original strand, 36316 - 36411
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 155  Q
    ||||||| ||| ||||||||||| || | |||||  || ||||||||||| |||||| |||||||||| | ||||||| ||||||| ||| |||||    
T  36316 ttagtgagggataacatgaaatctctctctaattatgttactaaattttgtgaccaaggaatttatgatggattttattttttccgtcactaattt 36411  T

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Target: scaffold0211 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 145
Target Start/End: Complemental strand, 19263 - 19178
Alignment:
Q  60 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 145  Q
    ||||||| ||| |||||||||||||| | |||||  ||  |||||||||||||||||  || |||||||  ||||||| |||||||    
T  19263 ttagtgagggataacatgaaatccctctctaattatgtttctaaattttgcgaccaagaaaattatgagagattttattttttccg 19178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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