View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19534_high_16 (Length: 221)
Name: NF19534_high_16
Description: NF19534
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19534_high_16 |
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Alignment Details
Target: chr8 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 16 - 204
Target Start/End: Complemental strand, 25117104 - 25116917
Alignment:
| Q |
16 |
aatatatgagatagcaatttgaagtatatttgcttcgtttgttccaaaatgcatgtcatacaaatgctacctaaagataaagcgacgcaaaagaaatata |
115 |
Q |
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| T |
25117104 |
aatatatgagatagcaatttgaagtatatttgcttcgtttgttcaaatatgcatgtcatacaa-tgctacctaaagataaagcgacgcaaaaaaaatata |
25117006 |
T |
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| Q |
116 |
acataaaatcatattaacttacttttatttaagacatcagcaaataatccttctgcacaacaacacttgattagaaatgataataaagg |
204 |
Q |
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||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||| ||||||||| | |||||||| |
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| T |
25117005 |
acataaaatcatattaacttacttttatttaagacatgaccaaataatccttctgcataacaacactttattagaaataacaataaagg |
25116917 |
T |
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