View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19536_low_1 (Length: 925)
Name: NF19536_low_1
Description: NF19536
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19536_low_1 |
 | |
|
| [»] scaffold0425 (1 HSPs) |
| | |
|
| [»] scaffold0958 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 854; Significance: 0; HSPs: 44)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 854; E-Value: 0
Query Start/End: Original strand, 20 - 917
Target Start/End: Original strand, 5298148 - 5299045
Alignment:
| Q |
20 |
ttgcataccctgaagcgttgaccaccataacctgctcgtgccatcaaactgcgcaatccctttacctgataaatttgttgtgatattttatcaccatctt |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5298148 |
ttgcataccctgaagcgttgaccaccataacctgctcgtgccatcaaactgcgcaatccctttacctgataaatttgttgtgatattttatcaccatctt |
5298247 |
T |
|
| Q |
120 |
ttaattcaagagagcaccaaatgtgacgtgtcctttcaggaatatcttgctcccaatcaccctctattctcaaacaaaattctcctgacactgattttgc |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
5298248 |
ttaattcaagagagcaccaaatgtgacgtgtcctttcaggaatatcttgctcccaatcaccctctattctcaaacaaaattctcccgacactgattttgc |
5298347 |
T |
|
| Q |
220 |
taaatcgttaacaagatcatgcataacaaagtacttgtaatcaacatatcctgatcgttgaaaaaatgaaactgattctagatcgtcaaagaattcatta |
319 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5298348 |
taaatcgttgacaagatcatgcataacaaagtacctgtaatcaacatatcctgatcgttgaaaaaatgaaactgattctagatcgtcaaagaattcatta |
5298447 |
T |
|
| Q |
320 |
cccaactcttcttcagttttgtcaattctgcagcacttcaacaaaccttctgccatccaaagcttgattaattcagccttgcaaaaaatataacctcttg |
419 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5298448 |
cccaactcttcttcagttttatcaattctgcagcacttcaacaaaccttctgccatccaaagcttgattaattcagccttgcaaaaaatataacctcttg |
5298547 |
T |
|
| Q |
420 |
gaaatatggaacaataagaaaaacaacgcttcagatttgaagggagatgatggaaactcaacctcaaaactgagttaatgttactctcaccctctgataa |
519 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5298548 |
gaaatatggaacaataagaaaaacaacgcttcagatttgaagggagatgatggaaactcaacctcaaaactgagttaatgttactctcaccctctgataa |
5298647 |
T |
|
| Q |
520 |
acaccacagatctgtctccaatatcttaacccattcacgttgagagaattttcttcgcaagagattccccaatgtttttagagctaaaggcaaccctcca |
619 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||| |
|
|
| T |
5298648 |
acaccacagatctgtctccaatatcttaacccattcacgttgagagaattttcttcgcaagagattccccaatgcttttacagctagaggcaaccctcca |
5298747 |
T |
|
| Q |
620 |
cacttttctacgattttcttgccaattgattcaagatttggatattcacttgcatttgtgccgtgaaaagcgtgtctcataaacatactccaacattcac |
719 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
5298748 |
cacttttctacgattttcttgccaattgattcaagatttggatattcacttgcatttgtgccgtgaaaagcgtgtctcacaaacatactccaacattcac |
5298847 |
T |
|
| Q |
720 |
tcttctccaattgcttcaaatgaagaagtttggtggacttcatgactgatgctacctccttgtcacgtgttgtcacaataatcttacttccggtagatcc |
819 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
5298848 |
tcttcttcaattgcttcaaatgaagaagtttggtggacttcataactgatgctacctccttgtcacgtgtggtcacaataatcttacttccggtagatcc |
5298947 |
T |
|
| Q |
820 |
attgttaaaaggaagtagtaagcgctcccaacattccgcactaccgttccagacatcatccaaaacaagcagatatttctttcctgttagtctctgct |
917 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5298948 |
attgttaaaaggaagtagtaagcgctcccaacattccgcactaccgttccagacatcatccaaaacaagcagatatttctttcctgttagtctctgct |
5299045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 129 - 916
Target Start/End: Original strand, 5249698 - 5250482
Alignment:
| Q |
129 |
gagagcaccaaatgtgacgtgtcctttcaggaatatcttgctcccaatcaccctctattctcaaacaaaattctcctgacactgattttgctaaatcgtt |
228 |
Q |
| |
|
|||| ||| ||||||||||||||||||||| | ||||| |||| ||| |||| ||| ||| ||||| |||||| || |||||||||||||||||| |
|
|
| T |
5249698 |
gagaacacgaaatgtgacgtgtcctttcagtgacatctttctccttatcgccctgtatcgccaagcaaaactctcctaccattgattttgctaaatcgtt |
5249797 |
T |
|
| Q |
229 |
aacaagatcatgcataacaaagtacttgtaatcaacatatcctgatcgttgaaaaaatgaaactgattctagatcgtcaaagaattcattacccaactct |
328 |
Q |
| |
|
|||||||||||||| ||||| | | ||| | | ||| | |||| | || |||||||||| |||| ||||||| | || ||||||||||| || ||| |
|
|
| T |
5249798 |
gacaagatcatgcattacaaacttc--gtact-accatctgttgattgctggaaaaatgaaattgatactagatcaacgaataattcattaccgaaatct |
5249894 |
T |
|
| Q |
329 |
tcttcagttttgtcaattctgcagcacttcaacaaaccttctgccatccaaagcttgattaattcagccttgcaaaaaatataacctcttggaaatatgg |
428 |
Q |
| |
|
| |||| |||||||||||| |||||||| ||||||||| ||||| |||||||| || || |||| |||| | |||| | |||||| | |||||||||| |
|
|
| T |
5249895 |
tgttcacttttgtcaattccgcagcactgcaacaaaccatctgctgcccaaagctggactagttcaccctttccaaaactgtaacctttaggaaatatgg |
5249994 |
T |
|
| Q |
429 |
aacaataagaaaaacaacgcttcagatttgaagggagatgatggaaactcaacctcaaaactgagttaatgttactctcaccctctgataaacaccacag |
528 |
Q |
| |
|
||||||||||||| |||||||| ||| | ||||||||| |||| ||||||| |||| ||||| |||||||||||||| ||||||||||||| ||||| |
|
|
| T |
5249995 |
aacaataagaaaagcaacgcttaagaatagaagggagacaatggtaactcaatctcagtactgaattaatgttactctcgccctctgataaacgccacat |
5250094 |
T |
|
| Q |
529 |
atctgtctccaatatcttaacccattcacgttgagagaattttcttcgcaagagattccccaatgtttttagagctaaaggcaaccctccacacttttct |
628 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||| || ||||||||||||||||| ||||| ||||||| |||||| ||||||||||||||||| || |
|
|
| T |
5250095 |
atctgtctccaatatcttaacccaatcacgttgagaaaactttcttcgcaagagatttcccaaagtttttacagctaatggcaaccctccacacttgcct |
5250194 |
T |
|
| Q |
629 |
acgattttcttgccaattgattcaagatttggatattcacttgcatttgtgccgtgaaaagcgtgtctcataaacatactccaacattcactcttctcca |
728 |
Q |
| |
|
| |||||||| ||||| ||||||||||||||||||||||||||||| | |||| |||||| ||||||| ||||||||||||||||||||||| || || |
|
|
| T |
5250195 |
ataattttcttaccaatagattcaagatttggatattcacttgcattccttccgtaaaaagcatgtctcacaaacatactccaacattcactctccttca |
5250294 |
T |
|
| Q |
729 |
attgcttcaaatgaagaagtttggtggacttcatgactgatgctacctccttgtcacgtgttgtcacaataatcttacttccggtagatccattgttaaa |
828 |
Q |
| |
|
||| || |||| ||| |||||||||||||||| ||||| |||||||||| ||||||||| |||||||| |||||||| |||||||||| | || |
|
|
| T |
5250295 |
atttctctaaattaagctccttggtggacttcatgatagatgccacctccttgttacgtgttgtaacaataattttacttccagtagatccatggcataa |
5250394 |
T |
|
| Q |
829 |
aggaagtagtaagcgctcccaacattccgcactaccgttccagacatcatccaaaacaagcagatatttctttcctgttagtctctgc |
916 |
Q |
| |
|
||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
5250395 |
gggaagtagtaagcgctcccaacattccacactcccattccagacatcatccaaaacaagaagatatttcttacctgttagtctctgc |
5250482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 105 - 917
Target Start/End: Original strand, 5267558 - 5268370
Alignment:
| Q |
105 |
ttttatcaccatcttttaattcaagagagcaccaaatgtgacgtgtcctttcaggaatatcttgctcccaatcaccctctattctcaaacaaaattctcc |
204 |
Q |
| |
|
||||||||||||||||||||||| |||| ||||||||||| ||||||||||| || | ||||| | ||| |||||| ||||||| ||| ||||||||||| |
|
|
| T |
5267558 |
ttttatcaccatcttttaattcaggagaacaccaaatgtgtcgtgtcctttcggggaaatcttccaccctatcaccttctattcgcaagcaaaattctcc |
5267657 |
T |
|
| Q |
205 |
tgacactgattttgctaaatcgttaacaagatcatgcataacaaagtacttgtaatcaacatatcctgatcgttgaaaaaatgaaactgattctagatcg |
304 |
Q |
| |
|
|| || ||||| ||||||||| || | |||||| ||||| || ||| | |||| |||||| |||| | || |||||||||| ||| ||||||| |
|
|
| T |
5267658 |
tgccattgattgtgctaaatcattgataagatcgtgcattgtgaaccgcttattatcaccatatcttgattgctggaaaaatgaaattgacactagatca |
5267757 |
T |
|
| Q |
305 |
tcaaagaattcattacccaactcttcttcagttttgtcaattctgcagcacttcaacaaaccttctgccatccaaagcttgattaattcagccttgcaaa |
404 |
Q |
| |
|
|| || |||| |||||||| ||||||||| |||| || ||| || |||||||| |||||| || ||||||||||| |||||||||||| | ||| || |
|
|
| T |
5267758 |
tctaataattgattacccagctcttcttcgcttttttctgttccgcggcacttcagcaaaccgtcggccatccaaagtttgattaattcacctttgtcaa |
5267857 |
T |
|
| Q |
405 |
aaatataacctcttggaaatatggaacaataagaaaaacaacgcttcagatttgaagggagatgatggaaactcaacctcaaaactgagttaatgttact |
504 |
Q |
| |
|
| | ||| | ||||||| |||||||||||||||||| ||||||||||| ||||||||||||||| ||||||| |||| ||||| ||||||||| | |
|
|
| T |
5267858 |
accacttgcctttgggaaataaggaacaataagaaaaacagcgcttcagattggaagggagatgatggtaactcaatctcagtactgaattaatgttaat |
5267957 |
T |
|
| Q |
505 |
ctcaccctctgataaacaccacagatctgtctccaatatcttaacccattcacgttgagagaattttcttcgcaagagattccccaatgtttttagagct |
604 |
Q |
| |
|
||||| |||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||| |||| |
|
|
| T |
5267958 |
gtcaccttctgataaacgccacatatctgtctccaatatcttaacccattcatgttgagagaattttcttcgcaagagatttcccaaagtttttacagct |
5268057 |
T |
|
| Q |
605 |
aaaggcaaccctccacacttttctacgattttcttgccaattgattcaagatttggatattcacttgcatttgtgccgtgaaaagcgtgtctcataaaca |
704 |
Q |
| |
|
||||| |||||||||||||| ||||| |||||||| |||||||||||||||||||| |||||||||||||| | || |||||||| |||| || ||||| |
|
|
| T |
5268058 |
aaaggtaaccctccacacttatctactattttctttccaattgattcaagatttgggtattcacttgcattgcttccatgaaaagcatgtcgcacaaaca |
5268157 |
T |
|
| Q |
705 |
tactccaacattcactcttctccaattgcttcaaatgaagaagtttggtggacttcatgactgatgctacctccttgtcacgtgttgtcacaataatctt |
804 |
Q |
| |
|
|||||||||||||||||| || || || || |||| ||| ||||||||| |||||||| | |||||||| | ||| |||||||||||||||||| || |
|
|
| T |
5268158 |
tactccaacattcactctccttcagtttctctaaattaaggtttttggtggagttcatgacagttgctaccttcatgttacgtgttgtcacaataatttt |
5268257 |
T |
|
| Q |
805 |
acttccggtagatccattgttaaaaggaagtagtaagcgctcccaacattccgcactaccgttccagacatcatccaaaacaagcagatatttctttcct |
904 |
Q |
| |
|
|||||| | |||||||| | || ||||||| |||||||||||||||||| |||| || ||||||||||||||||||| ||||| |||||||| ||| |
|
|
| T |
5268258 |
acttccagcagatccatggaataagggaagtaataagcgctcccaacattcttcactcccattccagacatcatccaaaaaaagcaagtatttcttgcct |
5268357 |
T |
|
| Q |
905 |
gttagtctctgct |
917 |
Q |
| |
|
||||||| ||||| |
|
|
| T |
5268358 |
gttagtccctgct |
5268370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 299; E-Value: 1e-167
Query Start/End: Original strand, 57 - 910
Target Start/End: Complemental strand, 4389515 - 4388659
Alignment:
| Q |
57 |
gtgccatcaaactgcgcaatccctttacctgataaatttgttgtgatattttatcaccatcttttaattcaagagagcaccaaatgtgacgtgtcctttc |
156 |
Q |
| |
|
||||||| ||||| || |||||||| | || |||||| ||||||| |||||||||||||||||||||| |||||| ||||||||||| ||||||||||| |
|
|
| T |
4389515 |
gtgccattaaactacgtaatcccttaatcttataaatgtgttgtgtcattttatcaccatcttttaattgaagagaacaccaaatgtgtcgtgtcctttc |
4389416 |
T |
|
| Q |
157 |
aggaatatcttgctcccaatcaccctctattctcaaacaaaattctcctgacactgattttgctaaatcgttaacaagatcatgcataacaaagtacttg |
256 |
Q |
| |
|
|| | || | ||||| |||| ||||||| ||| |||||||||||| || ||||||||||||||||| | ||||| ||||| ||||| ||| |
|
|
| T |
4389415 |
agtgacatgtcgctccttatcatcctctatctgcaagcaaaattctcctaccatcgattttgctaaatcgttgataagattgtgcattacaaaacgctt- |
4389317 |
T |
|
| Q |
257 |
taatcaacatatcctgatcgttgaaaaaatgaaactgattctagatcgtcaaagaattcattacccaactcttcttcagttttgtcaattctgcagcact |
356 |
Q |
| |
|
||| ||| | |||| || |||||||||| |||||||||||| |||| || ||||||||||||||||||||| |||||||| ||| ||| |||| |
|
|
| T |
4389316 |
--atcgtcatgtattgatttctggaaaaatgaaattgattctagatcaacaaataactcattacccaactcttcttcacttttgtcacttccgcaacact |
4389219 |
T |
|
| Q |
357 |
tcaacaaaccttctgccatccaaagcttgattaattcagccttgcaaaaaatataacctcttggaaatatggaacaataagaaaaacaacgcttcagatt |
456 |
Q |
| |
|
|||||||||| || || ||||||||||||||||||||| |||| |||||| | |||| | ||||||||||||||||||||||||||||| || ||| | |
|
|
| T |
4389218 |
tcaacaaaccatccgctatccaaagcttgattaattcacgcttgtcaaaaatgtgacctttgggaaatatggaacaataagaaaaacaacgtttaagaat |
4389119 |
T |
|
| Q |
457 |
tgaagggagatgatggaaactcaacctcaaaactgagttaatgttactctcaccctctgataaacaccacagatctgtctccaatatcttaacccattca |
556 |
Q |
| |
|
||||||||||||||| ||||||| |||| ||||| ||||||||| | ||||| ||||||||| ||||| ||| |||||||||||| ||||||||||| |
|
|
| T |
4389118 |
ggaagggagatgatggtaactcaatctcagtactgaattaatgttattgtcaccttctgataaatgccacatatcggtctccaatatcctaacccattca |
4389019 |
T |
|
| Q |
557 |
cgttgagagaattttcttcgcaagagattccccaatgtttttagagctaaaggcaaccctccacacttttctacgattttcttgccaattgattcaagat |
656 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| ||||||| |||||| || |||||| ||||||| ||||| |||||||||||||||||| |||||| |
|
|
| T |
4389018 |
cgttgagagaattttcttcgcaagagatttcccaacgtttttacagctaatggaaaccctacacacttatctacaattttcttgccaattgatacaagat |
4388919 |
T |
|
| Q |
657 |
ttggatattcacttgcatttgtgccgtgaaaagcgtgtctcataaacatactccaacattcactcttctccaattgcttcaaatgaagaagtttggtgga |
756 |
Q |
| |
|
||||||| ||||||||||| | ||||||||||| ||||||| |||||| |||||||||||||| | | || || || |||| ||| |||||||| |
|
|
| T |
4388918 |
ttggatactcacttgcattccttccgtgaaaagcatgtctcacaaacattctccaacattcactttcattcagtttctctaaattaagctccttggtgga |
4388819 |
T |
|
| Q |
757 |
cttcatgactgatgctacctccttgtcacgtgttgtcacaataatctt------acttccggtagatccattgttaaaaggaagtagtaagcgctcccaa |
850 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||||||||||||| || |||||| |||||||||| | | ||||||||||||||||||||| |
|
|
| T |
4388818 |
cttcatgatagatgctacctccttgtcacgagttgtcacaataattttacttccacttccagtagatccatggcataggggaagtagtaagcgctcccaa |
4388719 |
T |
|
| Q |
851 |
cattccgcactaccgttccagacatcatccaaaacaagcagatatttctttcctgttagt |
910 |
Q |
| |
|
| |||| || | || |||||||||||||| |||||||||| ||||||||| || |||||| |
|
|
| T |
4388718 |
ccttcctcattcccattccagacatcatctaaaacaagcaaatatttcttaccagttagt |
4388659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 190; E-Value: 1e-102
Query Start/End: Original strand, 281 - 890
Target Start/End: Complemental strand, 8569299 - 8568690
Alignment:
| Q |
281 |
aaaaatgaaactgattctagatcgtcaaagaattcattacccaactcttcttcagttttgtcaattctgcagcacttcaacaaaccttctgccatccaaa |
380 |
Q |
| |
|
|||||||||| || || ||||| || ||||| |||||||||| |||||||||| ||||||| || |||| |||||||||||||||||||||||||||| |
|
|
| T |
8569299 |
aaaaatgaaatggactccagatcatcgaagaactcattacccagctcttcttcacttttgtctcttttgcaacacttcaacaaaccttctgccatccaaa |
8569200 |
T |
|
| Q |
381 |
gcttgattaattcagccttgcaaaaaatataacctcttggaaatatggaacaataagaaaaacaacgcttcagatttgaagggagatgatggaaactcaa |
480 |
Q |
| |
|
||||||| |||||| | || ||| |||||| | ||||| || |||||||| | |||||||||||| ||||| |||||||||| |||| ||||||| |
|
|
| T |
8569199 |
gcttgatcaattcatctttttcaaattcataacccttgggaaaaattgaacaataggcaaaacaacgcttgagattggaagggagattatggtaactcaa |
8569100 |
T |
|
| Q |
481 |
cctcaaaactgagttaatgttactctcaccctctgataaacaccacagatctgtctccaatatcttaacccattcacgttgagagaattttcttcgcaag |
580 |
Q |
| |
|
||||| |||| |||||| | | ||||||| |||||| ||||| ||| ||||||||||| ||| |||||||| |||||| ||||||||| ||||| |
|
|
| T |
8569099 |
tctcaatactgggttaatttcatcgtcacccttcgataaatgccacatatcagtctccaatatgttagaccattcaccttgagaaaattttctttgcaag |
8569000 |
T |
|
| Q |
581 |
agattccccaatgtttttagagctaaaggcaaccctccacacttttctacgattttcttgccaattgattcaagatttggatattcacttgcatttgtgc |
680 |
Q |
| |
|
||||||||||||||||| | |||||||||||||||||||||||||||||| || ||||| ||||| ||||||||||||||||||||| |||| | | |
|
|
| T |
8568999 |
agattccccaatgttttcacagctaaaggcaaccctccacacttttctacaatcttctttccaatcgattcaagatttggatattcaaacacattctttc |
8568900 |
T |
|
| Q |
681 |
cgtgaaaagcgtgtctcataaacatactccaacattcactcttctccaattgcttcaaatgaagaagtttggtggacttcatgactgatgctacctcctt |
780 |
Q |
| |
|
| |||||||| ||| ||| ||| | ||||||||| || ||| |||||||||||| |||||||| | | || ||||||||| |||| || | ||| |
|
|
| T |
8568899 |
cttgaaaagcatgtttcacaaataaactccaacaatctttctcctccaattgctttaaatgaagttgctgctcagatttcatgactaatgcaacatgctt |
8568800 |
T |
|
| Q |
781 |
gtcacgtgttgtcacaataatcttacttccggtagatccattgttaaaaggaagtagtaagcgctcccaacattccgcactaccgttccagacatcatcc |
880 |
Q |
| |
|
|||||||||||||||||||||||||||||| | |||||||| ||||| ||||||||||| |||||||| ||||| || | || ||||||| |||||| |
|
|
| T |
8568799 |
gtcacgtgttgtcacaataatcttacttcctgaagatccatgattaaatggaagtagtaactgctcccaaaattcctcattcccattccagatatcatct |
8568700 |
T |
|
| Q |
881 |
aaaacaagca |
890 |
Q |
| |
|
| |||||||| |
|
|
| T |
8568699 |
agaacaagca |
8568690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 174; E-Value: 4e-93
Query Start/End: Original strand, 139 - 910
Target Start/End: Original strand, 8589265 - 8590036
Alignment:
| Q |
139 |
aatgtgacgtgtcctttcaggaatatcttgctcccaatcaccctctattctcaaacaaaattctcctgacactgattttgctaaatcgttaacaagatca |
238 |
Q |
| |
|
||||||||||||||||||| ||| ||| | ||| |||| |||||| || ||||||||||||||||||||||||||||||||| || ||||||||| |
|
|
| T |
8589265 |
aatgtgacgtgtcctttcaaagataccttccaccctggcaccttctatttgcacacaaaattctcctgacactgattttgctaaatcattgacaagatca |
8589364 |
T |
|
| Q |
239 |
tgcataacaaagtacttgtaatcaacatatcctgatcgttgaaaaaatgaaactgattctagatcgtcaaagaattcattacccaactcttcttcagttt |
338 |
Q |
| |
|
||||| || ||| || |||| ||| | |||||||| |||||||||| ||| || ||||| | || | ||||||||| |||||||||||| ||| |
|
|
| T |
8589365 |
tgcatggcatagtggttccaatcctcattt---gatcgttggaaaaatgaaattgactcaagatcaccgaaaatttcattacctaactcttcttcacttt |
8589461 |
T |
|
| Q |
339 |
tgtcaattctgcagcacttcaacaaaccttctgccatccaaagcttgattaattcagccttgcaaaaaatataacctcttggaaatatggaacaataaga |
438 |
Q |
| |
|
||| || ||| |||||||| ||||||||||||||||| |||||||| |||||| | || ||| |||||| | ||||| |||||||||||||| |
|
|
| T |
8589462 |
tgtgtgatccgcaacacttcaataaaccttctgccatccagagcttgatcaattcacctttttcaaattcataacccttgggaaaaatggaacaataaga |
8589561 |
T |
|
| Q |
439 |
aaaacaacgcttcagatttgaagggagatgatggaaactcaacctcaaaactgagttaatgttactctcaccctctgataaacaccacagatctgtctcc |
538 |
Q |
| |
|
||| ||| |||| ||| | |||||||||| |||| |||| || |||| ||||||||| ||| | || || |||||||||| ||||| || |||||| |
|
|
| T |
8589562 |
aaagcaatgctttagaatggaagggagattatggtaacttaatctcagaactgagtttatgctgtgttccccatctgataaacgccacatattagtctcc |
8589661 |
T |
|
| Q |
539 |
aatatcttaacccattcacgttgagagaattttcttcgcaagagattccccaatgtttttagagctaaaggcaaccctccacacttttctacgattttct |
638 |
Q |
| |
|
|||||||||| ||| ||| ||||||| || |||||||||||||| | |||| || ||||| |||||||||||||||||||||||| || | ||||||| |
|
|
| T |
8589662 |
aatatcttaatccactcatgttgagaaaaatttcttcgcaagagttggcccattgattttacagctaaaggcaaccctccacacttatccagtattttct |
8589761 |
T |
|
| Q |
639 |
tgccaattgattcaagatttggatattcacttgcatttgtgccgtgaaaagcgtgtctcataaacatactccaacattcactcttctccaattgcttcaa |
738 |
Q |
| |
|
||||| |||||||||||||||||||||||| |||| | || |||||||| ||| ||| ||| | ||||||||| || || || |||||||| | || |
|
|
| T |
8589762 |
tgccagttgattcaagatttggatattcacacacattctttccttgaaaagcatgtgtcacaaataaactccaacaatcgcttttgtccaattgttgtaa |
8589861 |
T |
|
| Q |
739 |
atgaagaagtttggtggacttcatgac-tg--atgctacctccttgtcacgtgttgtcacaataatcttacttccggtagatccattgttaaaaggaagt |
835 |
Q |
| |
|
|| || | |||||||| || | || || ||||||||||||| |||||||||||||| | |||||||||||| | | |||||| |||||| |||||| |
|
|
| T |
8589862 |
atcaaataacttggtggatttaagaacatgatatgctacctccttttcacgtgttgtcacgacaatcttacttccagaaaatccatggttaaagggaagt |
8589961 |
T |
|
| Q |
836 |
agtaagcgctcccaacattccgcactaccgttccagacatcatccaaaacaagcagatatttctttcctgttagt |
910 |
Q |
| |
|
||||| ||||||||||||| ||| | |||||||||| ||| || |||||||||| |||||||| ||||||||| |
|
|
| T |
8589962 |
agtaactgctcccaacattctgcattcccgttccagatatcgtctaaaacaagcaagtatttcttgcctgttagt |
8590036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 68 - 900
Target Start/End: Original strand, 8471029 - 8471858
Alignment:
| Q |
68 |
ctgcgcaatccctttacctgataaatttgttgtgatattttatcaccatcttttaattcaagagagcaccaaatgtgacgtgtcctttcaggaatatctt |
167 |
Q |
| |
|
||||| || ||||||| || |||||| || | | ||||| || |||||||||| || |||||| | || |||||||||||||| ||||||| ||||||| |
|
|
| T |
8471029 |
ctgcgtaacccctttatcttataaatctgctttaatattctagcaccatctttcaaatcaagataacagcaaatgtgacgtgttctttcagatatatctt |
8471128 |
T |
|
| Q |
168 |
gctcccaatcaccctctattctcaaacaaaattctcctgacactgattttgctaaatcgttaacaagatcatgcataacaaagtacttgtaatcaacata |
267 |
Q |
| |
|
|| | | ||||||||| ||| || ||||| ||| ||| |||||||||| ||||| || |||||||||||||| || | |||| || | | | | |
|
|
| T |
8471129 |
gcacactatcaccctcaatttgtaagcaaaactcttgggactctgattttgccaaatcattgacaagatcatgcatgacta--tactctta-tgatcttc |
8471225 |
T |
|
| Q |
268 |
tcctgatcgttgaaaaaatgaaactgattctagatcgtcaaagaattcattacccaactcttcttcagttttgtcaattctgcagcacttcaacaaacct |
367 |
Q |
| |
|
| |||| |||| | |||||||| || || ||||| |||||||||||||||||||||||||| ||| ||||||| ||||||| || |||| ||||||| |
|
|
| T |
8471226 |
tagtgattgttggagaaatgaaatggactcaagatcatcaaagaattcattacccaactcttcctcacttttgtctcttctgcaacatttcagcaaacct |
8471325 |
T |
|
| Q |
368 |
tctgccatccaaagcttgattaattcagccttgcaaaaaatataacctcttggaaatatggaacaataagaaaaacaacgcttcagatttgaagggagat |
467 |
Q |
| |
|
|||||||||||||||||||| |||||| || || ||| | |||| | |||||||| || || || | |||||| ||||||||||| |||||||| | |
|
|
| T |
8471326 |
tctgccatccaaagcttgatcaattcatccctgtcaaactcaaaacccttaggaaatatagagcagtaggcaaaacagcgcttcagattagaagggaggt |
8471425 |
T |
|
| Q |
468 |
gatggaaactcaacctcaaaactgagttaatgttactctcaccctctgataaacaccacagatctgtctccaatatcttaacccattcacgttgagagaa |
567 |
Q |
| |
|
|||| ||||||| ||||| | |||||||||||||| ||||| || | ||| | ||||| || | ||| | ||||||| ||||||| ||||||| | |
|
|
| T |
8471426 |
tatggtaactcaatctcaatgccgagttaatgttactgtcaccatcagctaaccgccacatgtcagcctctagtatcttatcccattcgtgttgagaata |
8471525 |
T |
|
| Q |
568 |
ttttcttcgcaagagattccccaatgtttttagagctaaaggcaaccctccacacttttctacgattttcttgccaattgattcaagatttggatattca |
667 |
Q |
| |
|
|||| | ||||| || || ||||||||||| | ||||||||||| |||||||||||| ||||| || || ||||||||||||||||||||||| ||||| |
|
|
| T |
8471526 |
ttttttccgcaaaaggtttcccaatgttttcacagctaaaggcagccctccacacttatctacaatatttttgccaattgattcaagatttgggtattcg |
8471625 |
T |
|
| Q |
668 |
cttgcatttgtgccgtgaaaagcgtgtctcataaacatactccaacattcactcttctccaattgcttcaaatgaagaagtttggtggacttcatgactg |
767 |
Q |
| |
|
|| ||| |||| ||||||| | || ||| | ||||||||| ||||||||||||||||| ||||||| || | || || || |||| | | |
|
|
| T |
8471626 |
ctcaattttttgccaggaaaagcaagactggaaaataaactccaacagtcactcttctccaattgtttcaaatcaaataactttgtagatttcacaatta |
8471725 |
T |
|
| Q |
768 |
atgctacctccttgtcacgtgttgtcacaataatcttacttccggtagatccattgttaaaaggaagtagtaagcgctcccaacattccgcactaccgtt |
867 |
Q |
| |
|
|||||||||| ||||| ||||||||||||||||||||||| | |||||||| |||||| ||||||||||| |||||||| |||| || | || |
|
|
| T |
8471726 |
atgctacctctttgtcgcgtgttgtcacaataatcttactcgtagaagatccatggttaaagggaagtagtaacttctcccaactttcctcattcagttt |
8471825 |
T |
|
| Q |
868 |
ccagacatcatccaaaacaagcagatatttctt |
900 |
Q |
| |
|
|||||||||||||| |||||| ||||| ||||| |
|
|
| T |
8471826 |
ccagacatcatccacaacaagtagatagttctt |
8471858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 145; E-Value: 8e-76
Query Start/End: Original strand, 143 - 903
Target Start/End: Original strand, 6735530 - 6736290
Alignment:
| Q |
143 |
tgacgtgtcctttcaggaatatcttgctcccaatcaccctctattctcaaacaaaattctcctgacactgattttgctaaatcgttaacaagatcatgca |
242 |
Q |
| |
|
||||||||||||||| ||| ||| | ||| | ||||||||||| ||||||||||||||||||||||||||||| |||||| || ||||||||||||| |
|
|
| T |
6735530 |
tgacgtgtcctttcattgataccttccaccctagcaccctctatttgcaaacaaaattctcctgacactgattttgttaaatcattgacaagatcatgca |
6735629 |
T |
|
| Q |
243 |
taacaaagtacttgtaatcaacatatcctgatcgttgaaaaaatgaaactgattctagatcgtcaaagaattcattacccaactcttcttcagttttgtc |
342 |
Q |
| |
|
| ||| ||| || || | || || ||| |||| |||||||||| ||| || ||||| | || | |||||| || |||||||||||| ||||||| |
|
|
| T |
6735630 |
tgacatagtgctcatatggatcaaat---gattgttggaaaaatgaaattgactcaagatcaccgaaaatttcattgccaaactcttcttcacttttgtc |
6735726 |
T |
|
| Q |
343 |
aattctgcagcacttcaacaaaccttctgccatccaaagcttgattaattcagccttgcaaaaaatataacctcttggaaatatggaacaataagaaaaa |
442 |
Q |
| |
|
|| ||| ||||||| ||||||||||||||||||||||||||| ||| | | || ||| ||||||| | || || ||||||||||| | ||| |
|
|
| T |
6735727 |
tgatccgcaacacttcagcaaaccttctgccatccaaagcttgatcaatacttcttttttaaatctataacccttggggaaaatggaacaataggcaaag |
6735826 |
T |
|
| Q |
443 |
caacgcttcagatttgaagggagatgatggaaactcaacctcaaaactgagttaatgttactctcaccctctgataaacaccacagatctgtctccaata |
542 |
Q |
| |
|
|||||||| |||| ||| ||||||| |||| ||||||| || | |||||||||||||| || || |||||||||| ||||| ||| |||||||||| |
|
|
| T |
6735827 |
caacgctttagatctgatgggagattatggtaactcaatcttagtactgagttaatgttgtggtccccatctgataaacgccacatatcagtctccaata |
6735926 |
T |
|
| Q |
543 |
tcttaacccattcacgttgagagaattttcttcgcaagagattccccaatgtttttagagctaaaggcaaccctccacacttttctacgattttcttgcc |
642 |
Q |
| |
|
|||||| ||||||| ||| ||| | |||| | ||||| || | ||||||| ||||| ||||| |||||||||||||||||| || || |||||||| || |
|
|
| T |
6735927 |
tcttaatccattcatgttcagaaagttttttacgcaaaagttggcccaatgattttatagctagaggcaaccctccacacttctccactattttcttccc |
6736026 |
T |
|
| Q |
643 |
aattgattcaagatttggatattcacttgcatttgtgccgtgaaaagcgtgtctcataaacatactccaacattcactcttctccaattgcttcaaatga |
742 |
Q |
| |
|
|||||||||||||||||||||||||| || || | || ||||| || ||| ||| ||| | |||||||| | || || |||||||| | |||| | |
|
|
| T |
6736027 |
aattgattcaagatttggatattcacaaacactttttccttgaaacgcatgtgtcacaaataatctccaacaattgcttttttccaattgttgtaaatca |
6736126 |
T |
|
| Q |
743 |
agaagtttggtggactt-----catgactgatgctacctccttgtcacgtgttgtcacaataatcttacttccggtagatccattgttaaaaggaagtag |
837 |
Q |
| |
|
| | || ||| || || |||||| ||||||||||||| |||||||||||||| ||||| |||||||| | |||||||| |||||| |||||||| |
|
|
| T |
6736127 |
aataattcggttgattttagaacatgac--atgctacctccttttcacgtgttgtcacgataattttacttccagaagatccatggttaaacggaagtag |
6736224 |
T |
|
| Q |
838 |
taagcgctcccaacattccgcactaccgttccagacatcatccaaaacaagcagatatttctttcc |
903 |
Q |
| |
|
|| |||||||| |||| |||| || ||||||| |||||| |||||||||| ||||||||||| |
|
|
| T |
6736225 |
tagctgctcccaatattctacactcccattccagatatcatctaaaacaagcaagtatttctttcc |
6736290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 308 - 820
Target Start/End: Original strand, 6882234 - 6882746
Alignment:
| Q |
308 |
aagaattcattacccaactcttcttcagttttgtcaattctgcagcacttcaacaaaccttctgccatccaaagcttgattaattcagccttgcaaaaaa |
407 |
Q |
| |
|
|||||||||||||| ||||||| ||| ||||||| || || ||||||||||||||||||||||||||||| || |||| |||| |||| || |
|
|
| T |
6882234 |
aagaattcattacctaactcttgttcgcttttgtctcttttgtgacacttcaacaaaccttctgccatccaaagtttaattagttcacccttctcaagct |
6882333 |
T |
|
| Q |
408 |
tataacctcttggaaatatggaacaataagaaaaacaacgcttcagatttgaagggagatgatggaaactcaacctcaaaactgagttaatgttactctc |
507 |
Q |
| |
|
||| || | |||||||| |||||||||| |||||||||||||||||| |||||||| | || ||||||| |||| | ||||||||| | || |
|
|
| T |
6882334 |
catagcccttgggaaatatagaacaataagcaaaacaacgcttcagattggaagggaggataaggtaactcaatctcagtaacaagttaatgtagatttc |
6882433 |
T |
|
| Q |
508 |
accctctgataaacaccacagatctgtctccaatatcttaacccattcacgttgagagaattttcttcgcaagagattccccaatgtttttagagctaaa |
607 |
Q |
| |
|
|||||| | ||||| ||||| ||| |||||||||| ||||| ||||||| || |||||||||| || |||||||||||||||||||||| || |||||| |
|
|
| T |
6882434 |
accctcgggtaaacgccacaaatcagtctccaataccttaatccattcagattcagagaatttttttagcaagagattccccaatgttttcagtgctaaa |
6882533 |
T |
|
| Q |
608 |
ggcaaccctccacacttttctacgattttcttgccaattgattcaagatttggatattcacttgcatttgtgccgtgaaaagcgtgtctcataaacatac |
707 |
Q |
| |
|
|||||||| |||||||||||||| ||||||||||| || |||||||||||||||||||| | |||| | || |||||||| | ||||| ||| | || |
|
|
| T |
6882534 |
ggcaaccccccacacttttctactattttcttgcctatcaattcaagatttggatattcaaatacattcctaccttgaaaagcatatctcacaaataaac |
6882633 |
T |
|
| Q |
708 |
tccaacattcactcttctccaattgcttcaaatgaagaagtttggtggacttcatgactgatgctacctccttgtcacgtgttgtcacaataatcttact |
807 |
Q |
| |
|
||||| | ||||||| |||||||||||| || || | || |||||| |||||| ||||||||| ||||||||| ||||||||||||| |||||||| |
|
|
| T |
6882634 |
tccaagaatcactctcctccaattgctttaagtgtattagccgggtggatctcatgattgatgctacttccttgtcatgtgttgtcacaatcatcttact |
6882733 |
T |
|
| Q |
808 |
tccggtagatcca |
820 |
Q |
| |
|
||| | ||||||| |
|
|
| T |
6882734 |
tcctgaagatcca |
6882746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 297 - 806
Target Start/End: Original strand, 6899807 - 6900316
Alignment:
| Q |
297 |
ctagatcgtcaaagaattcattacccaactcttcttcagttttgtcaattctgcagcacttcaacaaaccttctgccatccaaagcttgattaattcagc |
396 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||| ||||||| ||| ||| ||||||| ||||||||||||||||||||||||||||| |||| | |
|
|
| T |
6899807 |
ctagatcgttgaagaattcattacccaactcttcttcacttttgtctcttccgcaacacttcagcaaaccttctgccatccaaagcttgattacttcacc |
6899906 |
T |
|
| Q |
397 |
cttgcaaaaaatataacctcttggaaatatggaacaataagaaaaacaacgcttcagatttgaagggagatgatggaaactcaacctcaaaactgagtta |
496 |
Q |
| |
|
||| ||| ||| || ||||||||| ||||||||| ||||||| |||||||||| |||||||| | | || ||||||| |||| | | |||| |
|
|
| T |
6899907 |
cttctcaaactcatagccctttggaaataaagaacaataatcaaaacaatgcttcagattggaagggaggttaaggtaactcaatttcaataaagggtta |
6900006 |
T |
|
| Q |
497 |
atgttactctcaccctctgataaacaccacagatctgtctccaatatcttaacccattcacgttgagagaattttcttcgcaagagattccccaatgttt |
596 |
Q |
| |
|
||||| | | |||||||| ||||| ||| | ||| |||||||| ||||||||||| ||| ||| |||||| |||||| |||||||||||||||||||| |
|
|
| T |
6900007 |
atgttgttattaccctctggtaaacgccagaaatcagtctccaacatcttaacccaatcaggttcagagaactttctttccaagagattccccaatgttt |
6900106 |
T |
|
| Q |
597 |
ttagagctaaaggcaaccctccacacttttctacgattttcttgccaattgattcaagatttggatattcacttgcatttgtgccgtgaaaagcgtgtct |
696 |
Q |
| |
|
| |||||||||||||||||| ||||||||| ||| |||| ||||| || |||| ||||||||||||||| | | ||| | || |||| || ||| | |
|
|
| T |
6900107 |
tcagagctaaaggcaacccttcacacttttgtactatttgtttgcctatcaattccagatttggatattcaaatacttttcttcctagaaaggcatgttt |
6900206 |
T |
|
| Q |
697 |
cataaacatactccaacattcactcttctccaattgcttcaaatgaagaagtttggtggacttcatgactgatgctacctccttgtcacgtgttgtcaca |
796 |
Q |
| |
|
|| ||| | ||||||||| ||||||| || |||||| || |||||||| |||| || || | |||| ||||||||| ||| | ||| ||||||||||| |
|
|
| T |
6900207 |
cacaaataaactccaacaatcactctccttcaattgttttaaatgaagtagttgcgtagatcttatgattgatgctacttccatatcatgtgttgtcaca |
6900306 |
T |
|
| Q |
797 |
ataatcttac |
806 |
Q |
| |
|
|| ||||||| |
|
|
| T |
6900307 |
atcatcttac |
6900316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 270 - 795
Target Start/End: Original strand, 6168583 - 6169108
Alignment:
| Q |
270 |
ctgatcgttgaaaaaatgaaactgattctagatcgtcaaagaattcattacccaactcttcttcagttttgtcaattctgcagcacttcaacaaaccttc |
369 |
Q |
| |
|
||||| |||| |||||||| | ||| |||||| |||||||||||||||||||||||||||||| ||||||| ||| ||| ||||| | |||||||| |
|
|
| T |
6168583 |
ctgattgttggaaaaatgacattgacactagatgatcaaagaattcattacccaactcttcttcatttttgtcttttccgcaacactttagcaaaccttg |
6168682 |
T |
|
| Q |
370 |
tgccatccaaagcttgattaattcagccttgcaaaaaatataacctcttggaaatatggaacaataagaaaaacaacgcttcagatttgaagggagatga |
469 |
Q |
| |
|
|||||||||||||||||||||| || |||| ||| ||||||| | |||||||| |||||||| | ||||||| ||||||||||||||||||| | | |
|
|
| T |
6168683 |
tgccatccaaagcttgattaatccatccttttcaaacttataacccttgggaaatatagaacaatatgcaaaacaatgcttcagatttgaagggaggtta |
6168782 |
T |
|
| Q |
470 |
tggaaactcaacctcaaaactgagttaatgttactctcaccctctgataaacaccacagatctgtctccaatatcttaacccattcacgttgagagaatt |
569 |
Q |
| |
|
|| ||||| || | || || | |||| | || |||| || | ||||| ||||| ||| ||||| |||||||||||||||||| || ||||||| |
|
|
| T |
6168783 |
aggtaactctgtcttagaaaggaataaatgcttctgtcactcttaggtaaactccacaaatcagtctctaatatcttaacccattcattttcagagaatc |
6168882 |
T |
|
| Q |
570 |
ttcttcgcaagagattccccaatgtttttagagctaaaggcaaccctccacacttttctacgattttcttgccaattgattcaagatttggatattcact |
669 |
Q |
| |
|
||||| |||||||| ||||||||||||||||||| |||||| |||| ||||| |||||||| |||||| | ||||| ||||||||||||||||||||| |
|
|
| T |
6168883 |
ttctttgcaagagaatccccaatgtttttagagcaaaaggcgaccccccacatttttctactattttcataccaatcgattcaagatttggatattcaaa |
6168982 |
T |
|
| Q |
670 |
tgcatttgtgccgtgaaaagcgtgtctcataaacatactccaacattcactcttctccaattgcttcaaatgaagaagtttggtggacttcatgactgat |
769 |
Q |
| |
|
||| |||| | |||||| ||||| | ||| | ||||||| | ||||||| |||||||||| | |||||||| | | |||||| ||||||||||| |
|
|
| T |
6168983 |
catattcctgccttcaaaagcatgtcttacaaataaactccaagagtcactctcctccaattgccttaaatgaagtatctgggtggatctcatgactgat |
6169082 |
T |
|
| Q |
770 |
gctacctccttgtcacgtgttgtcac |
795 |
Q |
| |
|
|| || || || ||| |||||||||| |
|
|
| T |
6169083 |
gcaacttctttatcatgtgttgtcac |
6169108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 305 - 849
Target Start/End: Complemental strand, 6722396 - 6721852
Alignment:
| Q |
305 |
tcaaagaattcattacccaactcttcttcagttttgtcaattctgcagcacttcaacaaaccttctgccatccaaagcttgattaattcagccttgcaaa |
404 |
Q |
| |
|
||||||||||||||||||||||||| |||| ||||||| ||| ||| |||||||||||| |||||| |||||||||||| |||| |||| ||| || |
|
|
| T |
6722396 |
tcaaagaattcattacccaactcttgttcacttttgtctcttccgcaacacttcaacaaatcttctgtcatccaaagcttaattagttcactcttctcaa |
6722297 |
T |
|
| Q |
405 |
aaatataacctcttggaaatatggaacaataagaaaaacaacgcttcagatttgaagggagatgatggaaactcaacctcaaaactgagttaatgttact |
504 |
Q |
| |
|
| ||| || | |||||||| |||||||||| ||||||||||||||||| |||||||| | | ||||||||| || | || | ||||||||| | |
|
|
| T |
6722296 |
actcatagcccttgggaaatatagaacaataagcaaaacaacgcttcagatcggaagggaggttaaagaaactcaatcttagtacggggttaatgttgtt |
6722197 |
T |
|
| Q |
505 |
ctcaccctctgataaacaccacagatctgtctccaatatcttaacccattcacgttgagagaattttcttcgcaagagattccccaatgtttttagagct |
604 |
Q |
| |
|
||||||||||||||||||||||| ||| ||||||||||||| | |||||||| ||| ||| ||| | ||| ||| ||||| ||||||||||| |||||| |
|
|
| T |
6722196 |
ctcaccctctgataaacaccacaaatcagtctccaatatctgatcccattcaagtttagaaaatcgtattctcaaaagattacccaatgttttcagagct |
6722097 |
T |
|
| Q |
605 |
aaaggcaaccctccacacttttctacgattttcttgccaattgattcaagatttggatattcacttgcatttgtgccgtgaaaagcgtgtctcataaaca |
704 |
Q |
| |
|
|||||||||||||||||||||||| | | ||||||| || || |||||||||||| | ||| ||| |||| ||||||| || ||| ||| | |
|
|
| T |
6722096 |
aaaggcaaccctccacacttttctgccactttcttgataaccgactcaagatttggaaaatcaaacaaattcctgcctcgaaaagcatgattcacaaata |
6721997 |
T |
|
| Q |
705 |
tactccaacattcactcttctccaattgcttcaaatgaagaagtttggtggacttcatgactgatgctacctccttgtcacgtgttgtcacaataatctt |
804 |
Q |
| |
|
| |||||| | ||||| | ||||||||| | |||||||| || |||||| |||||| ||||||||| |||||||| ||||||||||| || ||||| |
|
|
| T |
6721996 |
tcctccaagagtcactttcctccaattgatataaatgaagtagccgggtggatctcatgattgatgctacttccttgtcccgtgttgtcacgatcatctt |
6721897 |
T |
|
| Q |
805 |
acttccggtagatccattgttaaaaggaagtagtaagcgctccca |
849 |
Q |
| |
|
|||||| | ||||||| |||||| |||||||||| ||||||| |
|
|
| T |
6721896 |
acttcctgaagatccacatttaaaaagaagtagtaactgctccca |
6721852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 276 - 652
Target Start/End: Original strand, 7587545 - 7587921
Alignment:
| Q |
276 |
gttgaaaaaatgaaactgattctagatcgtcaaagaattcattacccaactcttcttcagttttgtcaattctgcagcacttcaacaaaccttctgccat |
375 |
Q |
| |
|
||||||||||||||| || |||||||| || ||||||||||||||||||||||||||| ||||||| ||| ||| || |||| ||||||||||||||| |
|
|
| T |
7587545 |
gttgaaaaaatgaaatggactctagatcatccaagaattcattacccaactcttcttcacttttgtctcttccgcaacatttcagcaaaccttctgccat |
7587644 |
T |
|
| Q |
376 |
ccaaagcttgattaattcagccttgcaaaaaatataacctcttggaaatatggaacaataagaaaaacaacgcttcagatttgaagggagatgatggaaa |
475 |
Q |
| |
|
|||||||||||| |||||| | || ||| | |||||| | |||||||| |||||| | | |||||||||||| ||||| || ||||||| |||| || |
|
|
| T |
7587645 |
ccaaagcttgatcaattcatctttttcaaatacataacccttgggaaatattgaacaaaaggcaaaacaacgctttagattggatgggagattatggtaa |
7587744 |
T |
|
| Q |
476 |
ctcaacctcaaaactgagttaatgttactctcaccctctgataaacaccacagatctgtctccaatatcttaacccattcacgttgagagaattttcttc |
575 |
Q |
| |
|
||||| ||||| ||||||||||| | | |||||| |||| | ||||| |||||||||||||||||||| ||||||| |||||| ||||||||| |
|
|
| T |
7587745 |
ctcaatctcaatactgagttaatttcatcaccacccttcgatacatgccacatatctgtctccaatatcttaaaccattcagcttgagaaaattttcttt |
7587844 |
T |
|
| Q |
576 |
gcaagagattccccaatgtttttagagctaaaggcaaccctccacacttttctacgattttcttgccaattgattca |
652 |
Q |
| |
|
||| ||| |||||||||||||| | ||||| ||||||||||||||| || ||||| || ||||||||||| |||||| |
|
|
| T |
7587845 |
gcaggagtttccccaatgttttcacagctagaggcaaccctccacatttctctacaatcttcttgccaatcgattca |
7587921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 536 - 861
Target Start/End: Original strand, 5280614 - 5280939
Alignment:
| Q |
536 |
tccaatatcttaacccattcacgttgagagaattttcttcgcaagagattccccaatgtttttagagctaaaggcaaccctccacacttttctacgattt |
635 |
Q |
| |
|
||||||||||| |||||||| |||| ||||| |||||||||||||||| |||| ||| |||||||||||| |||||||||||| | ||| |||| |
|
|
| T |
5280614 |
tccaatatcttggtccattcaccaggagaaaatttcattcgcaagagattccctaatgatttcagagctaaaggcggccctccacacttgtttacaattt |
5280713 |
T |
|
| Q |
636 |
tcttgccaattgattcaagatttggatattcacttgcatttgtgccgtgaaaagcgtgtctcataaacatactccaacattcactcttctccaattgctt |
735 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||| ||| | | |||||| || || | |||||||||||| |
|
|
| T |
5280714 |
tcttcccaattgattcaagatttggatattcacttgcattttttccgtgaaaagcatgtctcacaaataaattccaaccatcgctttcctccaattgctt |
5280813 |
T |
|
| Q |
736 |
caaatgaagaagtttggtggacttcatgactgatgctacctccttgtcacgtgttgtcacaataatcttacttccggtagatccattgttaaaaggaagt |
835 |
Q |
| |
|
|||||||| | || || ||| ||||| |||| ||||||||| ||||||||||| |||||||||||||||||||| |||||||| ||||| |||||| |
|
|
| T |
5280814 |
caaatgaactatttgggaggatttcattactgctgctacctctttgtcacgtgtggtcacaataatcttacttccaaaagatccatgattaaagggaagt |
5280913 |
T |
|
| Q |
836 |
agtaagcgctcccaacattccgcact |
861 |
Q |
| |
|
||||| | |||||||||||| |||| |
|
|
| T |
5280914 |
agtaactgttcccaacattccccact |
5280939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 310 - 900
Target Start/End: Complemental strand, 6839229 - 6838633
Alignment:
| Q |
310 |
gaattcattacccaactcttcttcagttttgtcaattctgcagcacttcaacaaaccttctgccatccaaagcttgattaattcagccttgcaaaaaata |
409 |
Q |
| |
|
||||||||| ||||| ||||||||| ||||||| ||| |||| | |||| ||||||||||||||||||||||||||| |||||| || || ||| | |
|
|
| T |
6839229 |
gaattcatttcccaattcttcttcacttttgtctcttccgcagtatttcagcaaaccttctgccatccaaagcttgatcaattcatccctgtcaaactca |
6839130 |
T |
|
| Q |
410 |
taacctcttggaaatatggaacaataagaaaaacaacgcttcagatttgaagggagatgatggaaactcaacctcaaaactgagttaatgttactctcac |
509 |
Q |
| |
|
|||| || ||||||| ||||| || | |||||| || |||| | | |||||||| | |||| ||||||| |||||| | |||||||||||||| |||| |
|
|
| T |
6839129 |
aaacccctaggaaatacagaacagtaggcaaaacagcgtttcaaactggaagggaggttatggtaactcaatctcaaagccgagttaatgttactatcac |
6839030 |
T |
|
| Q |
510 |
cctct------gataaacaccacagatctgtctccaatatcttaacccattcacgttgagagaattttcttcgcaagagattccccaatgtttttagagc |
603 |
Q |
| |
|
| || | ||| | ||||| || | ||| | |||||| |||||||| ||| |||||||||| | |||||||| |||||||||||||| | ||| |
|
|
| T |
6839029 |
catcaccatcagctaagcgccacatgtcagcctctagtatcttttcccattcatgtttagagaattttttccgcaagaggttccccaatgttttcacagc |
6838930 |
T |
|
| Q |
604 |
taaaggcaaccctccacacttttctacgattttcttgccaattgattcaagatttggatattcacttgcatttgtgccgtgaaaagcgtgtctcataaac |
703 |
Q |
| |
|
||||||||||||||||||||| ||||| || || ||||||||||||||||| ||||| ||||| ||||||||| ||||||||||||| || | ||| |
|
|
| T |
6838929 |
taaaggcaaccctccacacttatctacaatctttttgccaattgattcaagttttgggtattcgcttgcatttttgccgtgaaaagcaagtgtggaaaat |
6838830 |
T |
|
| Q |
704 |
atactccaacattcactcttctccaattgcttcaaatgaagaagtttggtggacttcatgactgatgctacctccttgtcacgtgttgtcacaataatct |
803 |
Q |
| |
|
| |||||||| ||||||||||||||||| ||||||| || | || || || |||| | ||||||||| | || || ||||||||||||||||||| |
|
|
| T |
6838829 |
aaactccaactgtcactcttctccaattgtttcaaatcaaataactttgtagatttcacaattgatgctacatttttatcgcgtgttgtcacaataatct |
6838730 |
T |
|
| Q |
804 |
tacttccggtagatccattgttaaaaggaagtagtaagcgctcccaacattccgcactaccgttccagacatcatccaaaacaagcagatatttctt |
900 |
Q |
| |
|
|||| | |||||| | |||||||||||||||||| |||||||| |||| || | |||||||||||||||| |||||| ||||| ||||| |
|
|
| T |
6838729 |
tactcgtagaagatccttggttaaaaggaagtagtaacgtctcccaactttcctcattcagtttccagacatcatccacaacaagtagatagttctt |
6838633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 356 - 810
Target Start/End: Original strand, 6142064 - 6142518
Alignment:
| Q |
356 |
ttcaacaaaccttctgccatccaaagcttgattaattcagccttgcaaaaaatataacctcttggaaatatggaacaataagaaaaacaacgcttcagat |
455 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||| |||| ||| ||| || | |||||||| |||||||||| ||||||| ||||||||| |
|
|
| T |
6142064 |
ttcaagaaaccttctgccatccaaagcttgattaattcacccttctcaaactcatagcccttgggaaatatagaacaataagcaaaacaatgcttcagat |
6142163 |
T |
|
| Q |
456 |
ttgaagggagatgatggaaactcaacctcaaaactgagttaatgttactctcaccctctgataaacaccacagatctgtctccaatatcttaacccattc |
555 |
Q |
| |
|
|||||||| | || |||| | |||| ||| || |||||||| | |||||||||| ||||| ||||| ||| |||||||||||| |||||||||| |
|
|
| T |
6142164 |
cagaagggaggctaaggtaactgattctcagaacggaattaatgtttccgtcaccctctggtaaacgccacaaatcagtctccaatatcctaacccattc |
6142263 |
T |
|
| Q |
556 |
acgttgagagaattttcttcgcaagagattccccaatgtttttagagctaaaggcaaccctccacacttttctacgattttcttgccaattgattcaaga |
655 |
Q |
| |
|
| || |||||||||||| ||||||| ||||||||||||| |||||||| |||||||| |||||||||||||| ||||||||||| || |||||||| |
|
|
| T |
6142264 |
aatttcagagaattttctattcaagagaatccccaatgttttcagagctaatggcaaccccccacacttttctactattttcttgcctatcaattcaaga |
6142363 |
T |
|
| Q |
656 |
tttggatattcacttgcatttgtgccgtgaaaagcgtgtctcataaacatactccaacattcactcttctccaattgcttcaaatgaagaagtttggtgg |
755 |
Q |
| |
|
||||||||| || |||| | || ||||||| | ||||| ||| | ||||||| | | ||||| ||||||||||||||||||||| | | || |
|
|
| T |
6142364 |
tttggatatccaaacacattcctacctggaaaagcatatctcacaaataaactccaagagttactctcctccaattgcttcaaatgaagtatccgagcgg |
6142463 |
T |
|
| Q |
756 |
acttcatgactgatgctacctccttgtcacgtgttgtcacaataatcttacttcc |
810 |
Q |
| |
|
| ||||| ||||||||| ||||||||| ||||||||||||| ||||||||||| |
|
|
| T |
6142464 |
aactcatgcttgatgctacttccttgtcatgtgttgtcacaatcatcttacttcc |
6142518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 108 - 794
Target Start/End: Original strand, 6916619 - 6917317
Alignment:
| Q |
108 |
tatcaccatcttttaattcaagagagcaccaaatgtgacgtgtcctttcaggaatatcttgctcccaatcaccctctattctcaaacaaaattctcctga |
207 |
Q |
| |
|
|||||||||||| || ||||| |||||||||| ||||||||||||| ||| ||||||||| | |||| |||||||| || | |||||||| || |
|
|
| T |
6916619 |
tatcaccatcttccaaatcaaggcagcaccaaatatgacgtgtccttttagggatatcttgcacgttttcactctctattcggaagcggaattctcccga |
6916718 |
T |
|
| Q |
208 |
cactgattttgctaaatcgttaacaagatcatgcataacaaagtacttgtaatcaacatatc------------ctgatcgttgaaaaaatgaaactgat |
295 |
Q |
| |
|
|||||||||||||||||| || |||||||||||||| |||||||| | | | | | ||| |||||||||| |||||||| | ||| |
|
|
| T |
6916719 |
cactgattttgctaaatcattgacaagatcatgcatgacaaagtagtgcttacctgcccatcgtggcataattactgatcgttggaaaaatgatattgac |
6916818 |
T |
|
| Q |
296 |
tctagatcgtcaaagaattcattacccaactcttcttcagttttgtcaattctgcagcacttcaacaaaccttctgccatccaaagcttgattaattcag |
395 |
Q |
| |
|
||||||| | || |||||||||||||||||||||||| ||||||| ||| || ||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
6916819 |
actagatcattgaaaaattcattacccaactcttcttcacttttgtctcttccacaacacttcagcaaaccttctgccatccaaagcttgattaattcac |
6916918 |
T |
|
| Q |
396 |
ccttgcaaaaaatataacctcttggaaatatggaacaataagaaaaacaacgcttcagatttgaagggagatgatggaaactcaacctcaaaactgagtt |
495 |
Q |
| |
|
|||| ||| ||| || | |||||||||||||| |||| ||||||| ||||||||||||||| ||||| | || |||||| |||| | | | | |
|
|
| T |
6916919 |
ccttctcaaactcatagcccttgggaaatatggaacagtaagcaaaacaatgcttcagatttgaagagagattaaggtaactcattctcagtatcgggat |
6917018 |
T |
|
| Q |
496 |
aatgttactctcaccctctgataaacaccacagatctgtctccaatatcttaacccattcacgttgagagaattttcttcgcaagagattccccaatgtt |
595 |
Q |
| |
|
|||||| || | |||| ||||||||||| ||| ||||||| |||||||||||| ||||||| ||||||| |||| ||||||||||| |||| | | |
|
|
| T |
6917019 |
catgttaaatccaacttctgctaaacaccacaaatcagtctccattatcttaacccactcacgtttagagaatcttctacgcaagagattacccatttct |
6917118 |
T |
|
| Q |
596 |
tttagagctaaaggcaaccctccacacttttctacgattttcttgccaattgattcaagatttggatattcacttgcatttgtgccgtgaaaagcgtgtc |
695 |
Q |
| |
|
| | || |||||||||||||||||| || ||||| |||||||||||||| |||||||||||||| || ||| ||||| | | |||||||| || | |
|
|
| T |
6917119 |
gtcacagttaaaggcaaccctccacatttgtctactattttcttgccaataatttcaagatttggatgttgactcgcattcctatcatgaaaagcatgac |
6917218 |
T |
|
| Q |
696 |
tcataaacatactccaacattcactcttctccaattgcttcaaatgaagaagtttggtggacttcatgactgatgctacctccttgtcacgtgttgtca |
794 |
Q |
| |
|
||| ||| | ||||| ||| |||||| || |||||||| |||| ||| || |||||| |||||| ||||||||| ||||||||| |||||||| |
|
|
| T |
6917219 |
tcacaaataaactcctacaaccactctcttctaattgctttaaatcaagtagccgggtggatctcatgattgatgctacttccttgtcatatgttgtca |
6917317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 143 - 903
Target Start/End: Complemental strand, 6554927 - 6554167
Alignment:
| Q |
143 |
tgacgtgtcctttcaggaatatcttgctcccaatcaccctctattctcaaacaaaattctcctgacactgattttgctaaatcgttaacaagatcatgca |
242 |
Q |
| |
|
||||||||||||||| ||| ||| | ||| | ||||||||||| || |||||||||||||||||||||||||| |||||| || ||||||||||||| |
|
|
| T |
6554927 |
tgacgtgtcctttcattgataccttccaccctagcaccctctatttgcatacaaaattctcctgacactgattttgttaaatcattgacaagatcatgca |
6554828 |
T |
|
| Q |
243 |
taacaaagtacttgtaatcaacatatcctgatcgttgaaaaaatgaaactgattctagatcgtcaaagaattcattacccaactcttcttcagttttgtc |
342 |
Q |
| |
|
| | ||| || || | || || ||||| || |||||||||| ||| || ||||| | || | ||||||||| |||||||||||| ||||||| |
|
|
| T |
6554827 |
tgcaatagtcctcatatgtaccaaat---gatcgctggaaaaatgaaattgactcaagatcaccgaaaatttcattaccaaactcttcttcacttttgtc |
6554731 |
T |
|
| Q |
343 |
aattctgcagcacttcaacaaaccttctgccatccaaagcttgattaattcagccttgcaaaaaatataacctcttggaaatatggaacaataagaaaaa |
442 |
Q |
| |
|
|| ||| ||||||| ||||||||||||||||||||||||||| ||| | | || ||| |||| || | || || ||||||||||| | ||| |
|
|
| T |
6554730 |
tgatccgcaacacttcagcaaaccttctgccatccaaagcttgatcaatacttctttttcaaatctatagcccttggggaaaatggaacaatacgcaaag |
6554631 |
T |
|
| Q |
443 |
caacgcttcagatttgaagggagatgatggaaactcaacctcaaaactgagttaatgttactctcaccctctgataaacaccacagatctgtctccaata |
542 |
Q |
| |
|
|||||||| |||| |||||||||| |||| ||||||| || | |||||||||||||| || || |||||||||| ||||| ||| |||||||||| |
|
|
| T |
6554630 |
caacgctttagatccgaagggagattatggtaactcaatcttagtactgagttaatgttgtggtccccatctgataaacgccacatatcagtctccaata |
6554531 |
T |
|
| Q |
543 |
tcttaacccattcacgttgagagaattttcttcgcaagagattccccaatgtttttagagctaaaggcaaccctccacacttttctacgattttcttgcc |
642 |
Q |
| |
|
|||||| ||||||| ||| ||| | |||| | ||| || | |||||| ||||| |||||||||||||||||||||||| || || |||||| | || |
|
|
| T |
6554530 |
tcttaatccattcatgttcagaaatttttttatgcagaagttgtgccaatgattttatagctaaaggcaaccctccacacttgtccactattttcctccc |
6554431 |
T |
|
| Q |
643 |
aattgattcaagatttggatattcacttgcatttgtgccgtgaaaagcgtgtctcataaacatactccaacattcactcttctccaattgcttcaaatga |
742 |
Q |
| |
|
||||| |||||||||||||||||||| || || | || |||||||| ||| ||| ||| | |||||||| | || || |||||||| | |||| | |
|
|
| T |
6554430 |
aattgtttcaagatttggatattcacacacactttttccttgaaaagcatgtgtcacaaataatctccaacaattgcttttttccaattgttgtaaatca |
6554331 |
T |
|
| Q |
743 |
agaagtttggtggactt-----catgactgatgctacctccttgtcacgtgttgtcacaataatcttacttccggtagatccattgttaaaaggaagtag |
837 |
Q |
| |
|
| | |||||| || || |||||| ||||||||||||| |||||||||||||| |||||| ||||||| | |||||||| |||||| |||||||| |
|
|
| T |
6554330 |
aataatttggttgattttagaacatgac--atgctacctccttttcacgtgttgtcacgataatcatacttccagaagatccatggttaaacggaagtag |
6554233 |
T |
|
| Q |
838 |
taagcgctcccaacattccgcactaccgttccagacatcatccaaaacaagcagatatttctttcc |
903 |
Q |
| |
|
|| |||||||| |||| |||| || ||||| | |||||| |||||||||| ||||||||||| |
|
|
| T |
6554232 |
tagctgctcccaatattctacactcccattccatatatcatctaaaacaagcaagtatttctttcc |
6554167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 127 - 910
Target Start/End: Complemental strand, 6449304 - 6448504
Alignment:
| Q |
127 |
aagagagcaccaaatgtgacgtgtcctttcaggaatatcttgctcccaatcaccctctattctcaaacaaaattctcctgacactgattttgctaaatcg |
226 |
Q |
| |
|
||||||||||||||| |||||||||||| || ||| ||| || | ||||||||||| || |||||||||||||||||||||||||| |||||| |
|
|
| T |
6449304 |
aagagagcaccaaatatgacgtgtccttacacttatacaatgcaccttaacaccctctatttgcatacaaaattctcctgacactgattttgttaaatca |
6449205 |
T |
|
| Q |
227 |
ttaacaagatcatgcataacaaagtact----tgtaatcaacatatcct-----gatcgttgaaaaaatgaaactgattctagatcgtcaaagaattcat |
317 |
Q |
| |
|
|| |||||||||||||| ||| |||||| |||| || || || | ||| |||| |||||||||| ||| || ||||| || | ||||| |
|
|
| T |
6449204 |
ttcacaagatcatgcatgacatagtactcatatgtaccaaatatttcatcaaatgattgttggaaaaatgaaattgactcaagatcacagaaaatttcat |
6449105 |
T |
|
| Q |
318 |
tacccaactcttcttcagttttgtcaattctgcagcacttcaacaaaccttctgccatccaaagcttgattaattcagccttgcaaaaaatataacctct |
417 |
Q |
| |
|
|||| |||||||||||| ||||||| || ||| |||||||||| |||||||||||||||||||||||| |||||| |||| ||| ||||||| | |
|
|
| T |
6449104 |
taccaaactcttcttcacttttgtctgatccgcaacacttcaacataccttctgccatccaaagcttgatcaattcatcctttttaaatctataaccctt |
6449005 |
T |
|
| Q |
418 |
tggaaatatggaacaataagaaaaacaacgcttcagatttgaagggagatgatggaaactcaacctcaaaactgagttaatgttactctcaccctctgat |
517 |
Q |
| |
|
|| || ||||| ||||| | ||| |||| ||| ||| | |||||||||| |||| ||||||| |||| |||||||||||| | || | |||||| |
|
|
| T |
6449004 |
agggaaaatggagcaataggcaaagcaacactttagactggaagggagattatggtaactcaatctcagtactgagttaatggaatggtctctgtctgat |
6448905 |
T |
|
| Q |
518 |
aaacaccacagatctgtctccaatatcttaacccattcacgttgagagaattttcttcgcaagagattccccaatgtttttagagctaaaggcaaccctc |
617 |
Q |
| |
|
|||| ||||| ||| |||||||||||||| | ||||||| |||||| || ||| | ||||| | | |||| || ||||| ||||||||||||||||| |
|
|
| T |
6448904 |
aaacgccacatatcagtctccaatatcttcatccattcatcttgagaaaactttttccgcaaatgttggcccagtgattttatagctaaaggcaaccctc |
6448805 |
T |
|
| Q |
618 |
cacacttttctacgattttcttgccaattgattcaagatttggatattcacttgcatttgtgccgtgaaaagcgtgtctcataaacatactccaacattc |
717 |
Q |
| |
|
||||| | | | |||||| | ||||||||||||||| |||||||||||| || | | || |||||||| ||| ||| ||||| ||||||||| | |
|
|
| T |
6448804 |
cacacatgttcaatattttcctaccaattgattcaagaattggatattcacacacactctttccatgaaaagcatgtgtcaaaaacaaactccaacaatt |
6448705 |
T |
|
| Q |
718 |
actcttctccaattgcttcaaatgaagaagtttggtggacttcat-----gac-tgat--gctacctccttgtcacgtgttgtcacaataatcttacttc |
809 |
Q |
| |
|
|| || |||||||| | |||| || | |||||||| ||||| ||| |||| ||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
6448704 |
gcttttgtccaattggtgtaaatcaaataacttggtggatttcatttcaggacatgatatgctacctccttttcacgtgttgtcacaataatcttacttc |
6448605 |
T |
|
| Q |
810 |
cggtagatccattgttaaaaggaagtagtaagcgctcccaacattccgcactaccgttccagacatcatccaaaacaagcagatatttctttcctgttag |
909 |
Q |
| |
|
| | |||||||| |||||| ||||| |||| ||||||||| ||| ||| | |||||||||| || || |||||||| | |||||||||| |||||| |
|
|
| T |
6448604 |
cagaagatccatggttaaacggaagcagtacctgctcccaacgttctgcattcccgttccagatgtcgtctaaaacaagaaagtatttctttcttgttag |
6448505 |
T |
|
| Q |
910 |
t |
910 |
Q |
| |
|
| |
|
|
| T |
6448504 |
t |
6448504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 361 - 795
Target Start/End: Original strand, 6245070 - 6245504
Alignment:
| Q |
361 |
caaaccttctgccatccaaagcttgattaattcagccttgcaaaaaatataacctcttggaaatatggaacaataagaaaaacaacgcttcagatttgaa |
460 |
Q |
| |
|
||||||||||||||||||||| ||||||||| || |||| ||| |||||| | |||||||| |||||||||| ||||||| |||||||||| ||| |
|
|
| T |
6245070 |
caaaccttctgccatccaaagtttgattaatccatccttttcaaactcataacccttgggaaatatagaacaataagcaaaacaatgcttcagattggaa |
6245169 |
T |
|
| Q |
461 |
gggagatgatggaaactcaacctcaaaactgagttaatgttactctcaccctctgataaacaccacagatctgtctccaatatcttaacccattcacgtt |
560 |
Q |
| |
|
||||| | | || |||||| || | ||| || | |||||| || |||| ||| | ||||| ||||| ||| ||||| |||||||||||||||||| || |
|
|
| T |
6245170 |
gggaggttaaggtaactcattcttagaacggaataaatgttgctgtcactctcaggtaaacgccacaaatcagtctctaatatcttaacccattcatttt |
6245269 |
T |
|
| Q |
561 |
gagagaattttcttcgcaagagattccccaatgtttttagagctaaaggcaaccctccacacttttctacgattttcttgccaattgattcaagatttgg |
660 |
Q |
| |
|
||||||| ||||| |||||||| ||||||||||||| |||||||||||| |||| ||||| |||||||| |||||| | ||||| |||||||||||||| |
|
|
| T |
6245270 |
cagagaatcttctttgcaagagaatccccaatgttttcagagctaaaggcgaccccccacatttttctactattttcataccaatcgattcaagatttgg |
6245369 |
T |
|
| Q |
661 |
atattcacttgcatttgtgccgtgaaaagcgtgtctcataaacatactccaacattcactcttctccaattgcttcaaatgaagaagtttggtggacttc |
760 |
Q |
| |
|
||||||| ||| |||| | |||||| ||||| | ||| | ||||||| | ||||||| |||||||||| | |||||||| | | |||| | || |
|
|
| T |
6245370 |
atattcaaacatattcctgccttcaaaagcatgtcttacaaataaactccaagagtcactctcctccaattgccttaaatgaagtatctgggtgtatctc |
6245469 |
T |
|
| Q |
761 |
atgactgatgctacctccttgtcacgtgttgtcac |
795 |
Q |
| |
|
||||||||||| || || || ||| |||||||||| |
|
|
| T |
6245470 |
atgactgatgcaacttctttatcatgtgttgtcac |
6245504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 361 - 667
Target Start/End: Original strand, 6258979 - 6259288
Alignment:
| Q |
361 |
caaaccttctgccatccaaagcttgattaattcagccttgcaaaaaatataacctcttggaaatatggaacaataagaaaaacaacgcttcagatttgaa |
460 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| |||| ||| |||||| | |||||||| |||||||||| ||||||| |||||||||| ||| |
|
|
| T |
6258979 |
caaaccttttgccatccaaagcttgattaattcacccttttcaaactcataacccttgggaaatatagaacaataagcaaaacaatgcttcagattggaa |
6259078 |
T |
|
| Q |
461 |
gggagatgatggaaactcaacctcaaaactgagttaatgttactct---caccctctgataaacaccacagatctgtctccaatatcttaacccattcac |
557 |
Q |
| |
|
||||| | || |||||| |||||| | || | |||||| || | |||||| | ||||| ||||| ||| |||||||||||||||||||||||| |
|
|
| T |
6259079 |
gggaggctaaggtaactcattctcaaagcggaataaatgttgctgttgtcacccttgggtaaacgccacaaatcagtctccaatatcttaacccattcat |
6259178 |
T |
|
| Q |
558 |
gttgagagaattttcttcgcaagagattccccaatgtttttagagctaaaggcaaccctccacacttttctacgattttcttgccaattgattcaagatt |
657 |
Q |
| |
|
|| |||||| |||||| |||||||| ||||||||||||| |||||| |||||||||| ||||| |||||||| ||||||||||| || ||||||||||| |
|
|
| T |
6259179 |
tttcagagaactttctttgcaagagaatccccaatgttttcagagctgaaggcaaccccccacatttttctactattttcttgccgatcgattcaagatt |
6259278 |
T |
|
| Q |
658 |
tggatattca |
667 |
Q |
| |
|
|||||||||| |
|
|
| T |
6259279 |
tggatattca |
6259288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 313 - 840
Target Start/End: Complemental strand, 6520484 - 6519954
Alignment:
| Q |
313 |
ttcattacccaactcttcttcagttttgtcaattctgcagcacttcaacaaaccttctgccatccaaagcttgattaattcagccttgcaaaaaatataa |
412 |
Q |
| |
|
||||||||| || ||||||||| ||||||| | || | | ||||||||||||||||||||||||||||||||||| |||| | | || ||| ||||| |
|
|
| T |
6520484 |
ttcattaccaaaatcttcttcacttttgtccaatccgtaacacttcaacaaaccttctgccatccaaagcttgatcaatttatcttttttaaatttataa |
6520385 |
T |
|
| Q |
413 |
cctcttggaaatatggaacaataagaaaaacaacgcttcagatttgaagggagatgatggaaactcaacctcaaaactgagttaatgttactctcaccct |
512 |
Q |
| |
|
|| | ||||| || |||||||| | |||||||||||| ||||| |||||||||| |||| ||||||| ||||| |||||||||||| | || | | |
|
|
| T |
6520384 |
cccttgggaaaaatagaacaatatgcaaaacaacgctttagattggaagggagattatggtaactcaatctcaatactgagttaatggtgtggtctctgt |
6520285 |
T |
|
| Q |
513 |
ctgataaacaccacagatctgtctccaatatcttaacccattcacgttgagagaattttcttcgcaagagattccccaatgtttttagagctaaaggcaa |
612 |
Q |
| |
|
||||||||| ||||| ||| ||||||||||||| | ||||||| |||||| || ||| ||||||| || | ||||||| ||||| |||||||||||| |
|
|
| T |
6520284 |
ctgataaacgccacatatcagtctccaatatctccatccattcatcttgagaaaacttttttcgcaaaagttggcccaatgattttatagctaaaggcaa |
6520185 |
T |
|
| Q |
613 |
ccctccacacttttctacgattttcttgccaattgattcaagatttggatattcacttgcatttgtgccgtgaaaagcgtgtctcataaacatactccaa |
712 |
Q |
| |
|
||| |||||||| || || |||||| ||||||| | |||||| |||||||| |||| || |||| |||||||| ||| || ||| | ||||||| |
|
|
| T |
6520184 |
cccaccacacttgtccactattttcatgccaatcgtttcaagttttggatagtcacacacacgcatgccttgaaaagcatgtgtctcaaataaactccaa |
6520085 |
T |
|
| Q |
713 |
cattcactcttctccaattgcttcaaatgaagaagtttggtggacttcatgac-tga--tgctacctccttgtcacgtgttgtcacaataatcttacttc |
809 |
Q |
| |
|
|| | || || |||||||| | ||||||| | | |||||| |||| ||| ||| |||||||| ||| |||||||||||||| ||||||||||||| |
|
|
| T |
6520084 |
caattgcttttgtccaattgatgtaaatgaattaactcggtggagttcaggacatgatctgctaccttcttttcacgtgttgtcacgataatcttacttc |
6519985 |
T |
|
| Q |
810 |
cggtagatccattgttaaaaggaagtagtaa |
840 |
Q |
| |
|
| | |||||||| ||||| ||||||||||| |
|
|
| T |
6519984 |
cagaagatccatggttaagcggaagtagtaa |
6519954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 506 - 840
Target Start/End: Original strand, 6265619 - 6265953
Alignment:
| Q |
506 |
tcaccctctgataaacaccacagatctgtctccaatatcttaacccattcacgttgagagaattttcttcgcaagagattccccaatgtttttagagcta |
605 |
Q |
| |
|
|||||||| | ||||||||||| ||| ||||||||||||| |||||||||| | ||||||||||||| | |||||| ||||||||||||| |||| || |
|
|
| T |
6265619 |
tcaccctcgggtaaacaccacaaatcagtctccaatatctcaacccattcagttacagagaattttctttggaagagaatccccaatgttttcagagtta |
6265718 |
T |
|
| Q |
606 |
aaggcaaccctccacacttttctacgattttcttgccaattgattcaagatttggatattcacttgcatttgtgccgtgaaaagcgtgtctcataaacat |
705 |
Q |
| |
|
|||||||||| ||||| ||| |||| |||||||||||||| |||||||||||||||||||| |||| |||| |||||||| | ||||| ||| | |
|
|
| T |
6265719 |
aaggcaaccccccacattttgctactattttcttgccaatcaattcaagatttggatattcaaacacattcttgccttgaaaagcatatctcacaaataa |
6265818 |
T |
|
| Q |
706 |
actccaacattcactcttctccaattgcttcaaatgaagaagtttggtggacttcatgactgatgctacctccttgtcacgtgttgtcacaataatctta |
805 |
Q |
| |
|
||||||| | ||||||| |||||||||||| |||||||| ||| ||||| |||| ||| | |||||||| ||||| |||||||||| || |||||| |
|
|
| T |
6265819 |
actccaagagtcactctcctccaattgctttaaatgaagtagtcgtgtggatctcataactaacgctacctcactgtcatgtgttgtcacgatcatctta |
6265918 |
T |
|
| Q |
806 |
cttccggtagatccattgttaaaaggaagtagtaa |
840 |
Q |
| |
|
| || | ||||||| ||||| |||||||||||| |
|
|
| T |
6265919 |
cctcgagaagatccacggttaagaggaagtagtaa |
6265953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 308 - 858
Target Start/End: Complemental strand, 6591652 - 6591105
Alignment:
| Q |
308 |
aagaattcattacccaactcttcttcagttttgtcaattctgcagcacttcaacaaaccttctgccatccaaagcttgattaattcagccttgcaaaaaa |
407 |
Q |
| |
|
||||||||||| ||||||| ||||||| |||||| || || ||||| | ||| |||||||||||||||||||||||||||||| |||| ||| |
|
|
| T |
6591652 |
aagaattcattgcccaacttttcttcacttttgtgtctttcccaacactttagcaagccttctgccatccaaagcttgattaattcacccttctcaaact |
6591553 |
T |
|
| Q |
408 |
tataacctcttggaaatatggaacaataagaaaaacaacgcttcagatttgaagggagatgatggaaactcaacctcaaaactgagttaatgttactctc |
507 |
Q |
| |
|
||| || | |||||||| |||||||||| |||||||||||||||||| || ||||| | | || ||||||| |||| || | ||||||| || || |
|
|
| T |
6591552 |
catagcccttgggaaatatagaacaataagcaaaacaacgcttcagattggatgggaggttaaggtaactcaatctcagtacggggttaatg---ctgtc |
6591456 |
T |
|
| Q |
508 |
accctctgataaacaccacagatctgtctccaatatcttaacccattcacgttgagagaattttcttcgcaagagattccccaatgtttttagagctaaa |
607 |
Q |
| |
|
||| ||||||||| ||||| ||| |||||||||||||| | |||||| | |||||||||| || |||| || | ||||| |||||||||||||||| |
|
|
| T |
6591455 |
accatctgataaatgccacatatcagtctccaatatcttcatccattcggttacagagaattttttttgcaaaagttgccccattgtttttagagctaaa |
6591356 |
T |
|
| Q |
608 |
ggcaaccctccacacttttctacgattttcttgccaattgattcaagatttggatattcacttgcatttgtgccgtgaaaagcgtgtctcataaacatac |
707 |
Q |
| |
|
|| | ||| |||||||||||||| ||||||||||| || || ||||| ||||||||||| ||| | || ||||||| | ||||| ||| | || |
|
|
| T |
6591355 |
ggaatccccccacacttttctactattttcttgcctatcaatacaagagttggatattcaaacacatccctacctcgaaaagcatatctcacaaataaac |
6591256 |
T |
|
| Q |
708 |
tccaacattcactcttctccaattgcttcaaatgaagaagtttggtggacttcatgactgatgctacctccttgtcacgtgttgtcacaataatcttact |
807 |
Q |
| |
|
||||| | ||||||| ||||||||| || |||| || || | |||||| ||||| ||||||||| ||||||||| | |||||||| || |||||||| |
|
|
| T |
6591255 |
tccaagagtcactctcctccaattgatttaaatcaactagctgggtggatcccatgattgatgctacttccttgtcatgcgttgtcaccatcatcttact |
6591156 |
T |
|
| Q |
808 |
tccggtagatccattgttaaaaggaagtagtaagcgctcccaacattccgc |
858 |
Q |
| |
|
||| | |||||||| | |||| |||||||||| ||||||||||||||| |
|
|
| T |
6591155 |
tccagaagatccatggctaaacggaagtagtagcatctcccaacattccgc |
6591105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 313 - 900
Target Start/End: Original strand, 8454361 - 8454951
Alignment:
| Q |
313 |
ttcattacccaactcttcttcagttttgtcaattctgcagcacttcaacaaaccttctgccatccaaagcttgattaattcagccttgcaaaaaatataa |
412 |
Q |
| |
|
||||||||| |||||||||||| || ||| | || ||| |||||||||||||||||||||||||||||| |||| | |||| | || ||| ||| | |
|
|
| T |
8454361 |
ttcattaccaaactcttcttcacttctgttagatccgcaacacttcaacaaaccttctgccatccaaagcatgatcagttcatcttttttaaatttatga |
8454460 |
T |
|
| Q |
413 |
cctcttggaaatatggaacaataagaaaaacaacgcttcagatttgaagggagatgatggaaactcaacctcaaaactgagttaatgttactctcaccct |
512 |
Q |
| |
|
|| | ||||| ||||||||||| ||||| |||||||| ||||| |||||||||| |||| ||||||| |||| |||||||||| ||| || | | |
|
|
| T |
8454461 |
cccttgggaaaaatggaacaataggaaaagcaacgctttagattagaagggagattatggtaactcaatctcagtactgagttaacgttgtgatctactt |
8454560 |
T |
|
| Q |
513 |
ctgataaacaccacagatctgtctccaatatcttaacccattcacgttgagagaattttcttcgcaagagattccccaatgtttttagagctaaaggcaa |
612 |
Q |
| |
|
|||||||| ||||| ||| ||||||||||| |||| ||||||| ||| ||| ||| || | |||| || | ||||||| ||||| |||||||||||| |
|
|
| T |
8454561 |
ttgataaacgccacatatcagtctccaatatattaatccattcatgttcagaaaatgttttccgcagaagttggcccaatgattttatagctaaaggcaa |
8454660 |
T |
|
| Q |
613 |
ccctccacacttttctacgattttcttgccaattgattcaagatttggatattcacttgcatttgtgccgtgaaaagcgtgtctcataaacatactccaa |
712 |
Q |
| |
|
||||||||||||||| || ||||| | |||| |||||||||||||||||||||| || | | || |||||||| ||| ||| ||| | ||||||| |
|
|
| T |
8454661 |
ccctccacacttttccactatttttctaccaactgattcaagatttggatattcagacacactctttccttgaaaagcatgtgtcacaaataaactccaa |
8454760 |
T |
|
| Q |
713 |
cattcactcttctccaattgcttcaaatgaagaagtttggtggacttcatgac-tga--tgctacctccttgtcacgtgttgtcacaataatcttacttc |
809 |
Q |
| |
|
|| | || || |||||||| | |||| || | | || || |||| ||| | | ||| |||||||| |||||||||||||| | ||||||||||| |
|
|
| T |
8454761 |
caattgcttttgtccaattgttgtaaatcaaataactctgtcgatttcaggacattatctgccacctccttctcacgtgttgtcacgacaatcttacttc |
8454860 |
T |
|
| Q |
810 |
cggtagatccattgttaaaaggaagtagtaagcgctcccaacattccgcactaccgttccagacatcatccaaaacaagcagatatttctt |
900 |
Q |
| |
|
| |||||||| |||||| ||||||||||| |||||||| ||||||| |||||||||| ||| || |||||||||| ||||||||| |
|
|
| T |
8454861 |
caaaagatccatggttaaagggaagtagtaacaactcccaacgttccgcatccccgttccagatatcgtctaaaacaagcaaatatttctt |
8454951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 313 - 662
Target Start/End: Original strand, 6946976 - 6947325
Alignment:
| Q |
313 |
ttcattacccaactcttcttcagttttgtcaattctgcagcacttcaacaaaccttctgccatccaaagcttgattaattcagccttgcaaaaaatataa |
412 |
Q |
| |
|
||||||||| |||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||| | || ||| ||||| |
|
|
| T |
6946976 |
ttcattacctaactcttcttcacttttgtctcttctgcaacacttcaacaaaccttctgccatccaaagcttgatcaattcatctttttcaaatgtataa |
6947075 |
T |
|
| Q |
413 |
cctcttggaaatatggaacaataagaaaaacaacgcttcagatttgaagggagatgatggaaactcaacctcaaaactgagttaatgttactctcaccct |
512 |
Q |
| |
|
|| | ||||| ||||| ||||| | ||||||||||||| |||| ||||| |||| ||| ||||||| |||| |||| ||||| || | || || | |
|
|
| T |
6947076 |
cccttgggaaaaatggagcaataggcaaaacaacgcttccgattggaaggaagattgtggtaactcaatctcagcactggattaattttgttgtccccgt |
6947175 |
T |
|
| Q |
513 |
ctgataaacaccacagatctgtctccaatatcttaacccattcacgttgagagaattttcttcgcaagagattccccaatgtttttagagctaaaggcaa |
612 |
Q |
| |
|
|| |||| | ||||| ||| ||||||||||||| | ||||||| |||||| || ||| ||||||| || | |||| || ||||| |||||||||||| |
|
|
| T |
6947176 |
ctaataatcgccacatatcagtctccaatatctgcatccattcatcttgagaaaacttttttcgcaaaagttggcccagtgattttatagctaaaggcaa |
6947275 |
T |
|
| Q |
613 |
ccctccacacttttctacgattttcttgccaattgattcaagatttggat |
662 |
Q |
| |
|
|||||||||||| || || |||||| | |||||||||||||| ||||||| |
|
|
| T |
6947276 |
ccctccacacttgtccactattttcctcccaattgattcaagttttggat |
6947325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 308 - 667
Target Start/End: Original strand, 7749732 - 7750088
Alignment:
| Q |
308 |
aagaattcattacccaactcttcttcagttttgtcaattctgcagcacttcaacaaaccttctgccatccaaagcttgattaattcagccttgcaaaaaa |
407 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| ||| || ||||| | ||| |||||||||||||||||||||||||| || ||| ||| |
|
|
| T |
7749732 |
aagaattcattacccaactgttcttcagttttgtctcttccccaacactttagcaagccttctgccatccaaagcttgattaacccacgcttctcaaact |
7749831 |
T |
|
| Q |
408 |
tataacctcttggaaatatggaacaataagaaaaacaacgcttcagatttgaagggagatgatggaaactcaacctcaaaactgagttaatgttactctc |
507 |
Q |
| |
|
||| || |||||||||| |||||||||| |||||||||||||||||| |||||||| | | || || |||| |||| | | ||||||||| || |
|
|
| T |
7749832 |
catagccctttggaaatatagaacaataagcaaaacaacgcttcagattggaagggaggttaaggtaattcaatctcagtatggggttaatgttg---tc |
7749928 |
T |
|
| Q |
508 |
accctctgataaacaccacagatctgtctccaatatcttaacccattcacgttgagagaattttcttcgcaagagattccccaatgtttttagagctaaa |
607 |
Q |
| |
|
|| |||||||||| ||||| ||| ||||||||||| |||| ||||||| || | ||||||| || |||| | | ||||||||||| |||||||||| |
|
|
| T |
7749929 |
cccgtctgataaacgccacatatcagtctccaatattttaatccattcagtttcacagaatttgttttgcaataattgccccaatgtttctagagctaaa |
7750028 |
T |
|
| Q |
608 |
ggcaaccctccacacttttctacgattttcttgccaattgattcaagatttggatattca |
667 |
Q |
| |
|
|||||||| |||||||||||||| ||||||||||| || || || ||||||||||||||| |
|
|
| T |
7750029 |
ggcaaccccccacacttttctactattttcttgccgatcgactcgagatttggatattca |
7750088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 127 - 903
Target Start/End: Complemental strand, 6480499 - 6479711
Alignment:
| Q |
127 |
aagagagcaccaaatgtgacgtgtcctttcaggaatatcttgctcccaatcaccctctattctcaaacaaaattctcctgacactgattttgctaaatcg |
226 |
Q |
| |
|
||||||| ||| ||| ||||||||||||||| | || ||| | ||| | ||||||||||| || ||||||||||||||||||||||||||||||||| |
|
|
| T |
6480499 |
aagagagaaccgaatatgacgtgtcctttcaaggctaccttccaccctagcaccctctatttgcatacaaaattctcctgacactgattttgctaaatca |
6480400 |
T |
|
| Q |
227 |
ttaacaagatcatgcataacaaagtacttgtaatcaacatatcct---------gatcgttgaaaaaatgaaactgattctagatcgtcaaagaattcat |
317 |
Q |
| |
|
|| ||||||| || ||| ||| ||| || || | ||||| | ||| |||| |||||||||| ||| || ||||| | || | ||||| |
|
|
| T |
6480399 |
ttgacaagattatacatgacatagtgctcatatgtaccatatgttttatcaaatgattgttggaaaaatgaaattgactcaagatcaccgaaaatttcat |
6480300 |
T |
|
| Q |
318 |
tacccaactcttcttcagttttgtcaattctgcagcacttcaacaaaccttctgccatccaaagcttgattaattcagccttgcaaaaaatataacctct |
417 |
Q |
| |
|
|||| |||||||||||| |||||| || ||| ||||||||||||||||||||||||||||||||||| |||||| | || ||| ||||||| | |
|
|
| T |
6480299 |
taccaaactcttcttcacttttgtatgatccgcaacacttcaacaaaccttctgccatccaaagcttgatcaattcatctttttcaaatgtataaccctt |
6480200 |
T |
|
| Q |
418 |
tggaaatatggaacaataagaaaaacaacgcttcagatttgaagggagatgatggaaactcaacctcaaaactgagttaatgttactctcaccctctgat |
517 |
Q |
| |
|
|| || |||||||| | | ||| |||||||| ||| |||||||||| ||| ||||||| |||| |||| ||||| || | || | |||||| |
|
|
| T |
6480199 |
ggggaaaatggaacagaaggcaaagcaacgcttttgatcggaagggagattgtggtaactcaatctcagcactggattaattttgttgtccacgtctgat |
6480100 |
T |
|
| Q |
518 |
aaacaccacagatctgtctccaatatcttaacccattcacgttgagagaattttcttcgcaagagattccccaatgtttttagagctaaaggcaaccctc |
617 |
Q |
| |
|
|||| ||||| ||| |||||||||||||| | ||||||| |||||| || ||| | ||||| || | ||||||| | ||| |||||||||||||||| |
|
|
| T |
6480099 |
aaacgccacatatcagtctccaatatcttcatccattcatcttgagaaaactttttccgcaaaagttggcccaatgatattatagctaaaggcaaccctt |
6480000 |
T |
|
| Q |
618 |
cacacttttctacgattttcttgccaattgattcaagatttggatattcacttgcatttgtgccgtgaaaagcgtgtctcataaacatactccaacattc |
717 |
Q |
| |
|
||||||| || | |||||| |||||||||||||||| |||||||| |||| || | |||| |||||||| || ||| ||| | |||||||| || |
|
|
| T |
6479999 |
cacacttgtccattattttcctgccaattgattcaagttttggatagtcacacacactcttgccttgaaaagcatgagtcacaaataatctccaacaatc |
6479900 |
T |
|
| Q |
718 |
actcttctccaattgcttcaaatgaagaagtttggtggacttcatgac-tg--atgctacctccttgtcacgtgttgtcacaataatcttacttccggta |
814 |
Q |
| |
|
||| || ||||||| | || | | ||||||| |||| ||| || |||| |||||||| |||||||||||||| |||||||||||||| | |
|
|
| T |
6479899 |
acttttgaccaattgacgtagatcacataacatggtggatttcacgacatgatatgccacctccttttcacgtgttgtcacgataatcttacttccaaaa |
6479800 |
T |
|
| Q |
815 |
gatccattgttaaaaggaagtagtaagcgctcccaacattccgcactaccgttccagacatcatccaaaacaagcagatatttctttcc |
903 |
Q |
| |
|
||||||| |||||| ||||||||||| |||||||| | || || | || ||||||| |||||| |||||||||| ||||||||||| |
|
|
| T |
6479799 |
gatccatggttaaatggaagtagtaactgctcccaatactctacattcccattccagatatcatctaaaacaagcaagtatttctttcc |
6479711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 270 - 806
Target Start/End: Complemental strand, 13270890 - 13270357
Alignment:
| Q |
270 |
ctgatcgttgaaaaaatgaaactgattctagatcgtcaaagaattcattacccaactcttcttcagttttgtcaattctgcagcacttcaacaaaccttc |
369 |
Q |
| |
|
||||| |||| ||||| |||| ||| ||||||| | ||||||| ||||||||||||||||||| ||||| | |||| ||| | |||||||| |
|
|
| T |
13270890 |
ctgattgttggaaaaacgaaattgacactagatcattgaagaatttattacccaactcttcttcatttttggctattcc------ctttagcaaaccttg |
13270797 |
T |
|
| Q |
370 |
tgccatccaaagcttgattaattcagccttgcaaaaaatataacctcttggaaatatggaacaataagaaaaacaacgcttcagatttgaagggagatga |
469 |
Q |
| |
|
|||||||||||||||||||||| || |||| ||| |||||| | |||||||| |||||||| | ||||||| |||||||||| ||||| || | |
|
|
| T |
13270796 |
tgccatccaaagcttgattaatccatccttttcaaactcataacccttgggaaatatagaacaatatgcaaaacaatgcttcagattggaaggtaggcta |
13270697 |
T |
|
| Q |
470 |
tggaaactcaacctcaaaactgagttaatg---ttactctcaccctctgataaacaccacagatctgtctccaatatcttaacccattcacgttgagaga |
566 |
Q |
| |
|
|| |||||| |||| || || |||| || || ||||| || || ||| ||||| ||| |||||||||||||||||||||| | || ||||| |
|
|
| T |
13270696 |
aggtaactcattctcagaatggaaaaaatgctgttgctgtcaccttcggagaaatgccacaaatcagtctccaatatcttaacccatttaatttcagaga |
13270597 |
T |
|
| Q |
567 |
attttcttcgcaagagattccccaatgtttttagagctaaaggcaaccctccacacttttctacgattttcttgccaattgattcaagatttggatattc |
666 |
Q |
| |
|
|||||||| |||||||| ||||||||||||| |||||||||||||| || ||||| |||||||| ||| || | || || |||||||||||||||||||| |
|
|
| T |
13270596 |
attttctttgcaagagaatccccaatgttttcagagctaaaggcaaacccccacatttttctactattctcataccgatggattcaagatttggatattc |
13270497 |
T |
|
| Q |
667 |
acttgcatttgtgccgtgaaaagcgtgtctcataaacatactccaacattcactcttctccaattgcttcaaatgaagaagtttggtggacttcatgact |
766 |
Q |
| |
|
| ||| |||| | |||||| ||||||| ||| | ||||||| | ||||||| |||||||||| | ||||||| | | |||| |||||||| |
|
|
| T |
13270496 |
aaacatattcctgccttcaaaagcatgtctcacaaataaactccaagagtcactctcctccaattgccttaaatgaattatccggttggatctcatgact |
13270397 |
T |
|
| Q |
767 |
gatgctacctccttgtcacgtgttgtcacaataatcttac |
806 |
Q |
| |
|
|||||||| || || ||| |||| ||||| |||||||||| |
|
|
| T |
13270396 |
gatgctacttcattatcatgtgtcgtcacgataatcttac |
13270357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 5280188 - 5280306
Alignment:
| Q |
125 |
tcaagagagcaccaaatgtgacgtgtcctttcaggaatatcttgctcccaatcaccctctattctcaaacaaaattctcctgacactgattttgctaaat |
224 |
Q |
| |
|
||||||||||||||||| || |||| |||||||| ||||||||| ||| |||||||||||||| ||| |||||||||||||||||||| ||||||||| |
|
|
| T |
5280188 |
tcaagagagcaccaaatatggcgtgctctttcagggatatcttgcaccctatcaccctctattcgtaaagaaaattctcctgacactgatcttgctaaat |
5280287 |
T |
|
| Q |
225 |
cgttaacaagatcatgcat |
243 |
Q |
| |
|
| | |||||||||||||| |
|
|
| T |
5280288 |
caatgacaagatcatgcat |
5280306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 768 - 903
Target Start/End: Original strand, 6947434 - 6947569
Alignment:
| Q |
768 |
atgctacctccttgtcacgtgttgtcacaataatcttacttccggtagatccattgttaaaaggaagtagtaagcgctcccaacattccgcactaccgtt |
867 |
Q |
| |
|
||||| ||||||| ||||| |||||||| |||||||||||||| | |||||||| |||||| ||||| ||||| ||||||||||||| ||| ||||| |
|
|
| T |
6947434 |
atgctgcctccttttcacgagttgtcacgataatcttacttccagaagatccatggttaaagggaagaagtaacagctcccaacattctgcatccccgtt |
6947533 |
T |
|
| Q |
868 |
ccagacatcatccaaaacaagcagatatttctttcc |
903 |
Q |
| |
|
||||| |||||| |||||||||| ||||||||||| |
|
|
| T |
6947534 |
ccagatatcatctaaaacaagcaagtatttctttcc |
6947569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 108 - 243
Target Start/End: Complemental strand, 6591864 - 6591729
Alignment:
| Q |
108 |
tatcaccatcttttaattcaagagagcaccaaatgtgacgtgtcctttcaggaatatcttgctcccaatcaccctctattctcaaacaaaattctcctga |
207 |
Q |
| |
|
|||||||||||| || ||||| |||||||||| ||||||||||| | ||| ||||||||| | ||||||||||| || || ||||||||||| |
|
|
| T |
6591864 |
tatcaccatcttccaaatcaaggcagcaccaaatatgacgtgtcctattagggatatcttgcacgttgccaccctctatttctaagcagaattctcctga |
6591765 |
T |
|
| Q |
208 |
cactgattttgctaaatcgttaacaagatcatgcat |
243 |
Q |
| |
|
|||||||||||||||||| || |||||||||||||| |
|
|
| T |
6591764 |
cactgattttgctaaatcattgacaagatcatgcat |
6591729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 108 - 243
Target Start/End: Original strand, 6899606 - 6899741
Alignment:
| Q |
108 |
tatcaccatcttttaattcaagagagcaccaaatgtgacgtgtcctttcaggaatatcttgctcccaatcaccctctattctcaaacaaaattctcctga |
207 |
Q |
| |
|
|||||||||||| || ||||| |||||||||| || || ||||||||||| ||||||||| ||||||||||||||| || | |||||||||||| |
|
|
| T |
6899606 |
tatcaccatcttccaaatcaaggcagcaccaaatctggcgcgtcctttcagggatatcttgcaggttatcaccctctattcttaagcgaaattctcctga |
6899705 |
T |
|
| Q |
208 |
cactgattttgctaaatcgttaacaagatcatgcat |
243 |
Q |
| |
|
|||| |||| |||||||| | |||||||||||||| |
|
|
| T |
6899706 |
cactaatttcgctaaatcatatacaagatcatgcat |
6899741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 110 - 243
Target Start/End: Complemental strand, 6722588 - 6722455
Alignment:
| Q |
110 |
tcaccatcttttaattcaagagagcaccaaatgtgacgtgtcctttcaggaatatcttgctcccaatcaccctctattctcaaacaaaattctcctgaca |
209 |
Q |
| |
|
|||||||| || || ||||| |||||||||||| |||||||||||| | ||||||||| | ||||| ||||| | ||||| ||||||||||||| |
|
|
| T |
6722588 |
tcaccatccttcaaatcaaggcagcaccaaatgttacgtgtcctttctgagatatcttgcacattttcaccttctatacggaaacagaattctcctgaca |
6722489 |
T |
|
| Q |
210 |
ctgattttgctaaatcgttaacaagatcatgcat |
243 |
Q |
| |
|
|||| || |||||||| ||||||||||||||||| |
|
|
| T |
6722488 |
ctgaattggctaaatcattaacaagatcatgcat |
6722455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 108 - 237
Target Start/End: Original strand, 7749520 - 7749649
Alignment:
| Q |
108 |
tatcaccatcttttaattcaagagagcaccaaatgtgacgtgtcctttcaggaatatcttgctcccaatcaccctctattctcaaacaaaattctcctga |
207 |
Q |
| |
|
|||||||||||| || ||||| |||||||||||||||| ||||||| ||| || |||||| | | || |||||||||| || || |||||||| || |
|
|
| T |
7749520 |
tatcaccatcttccaaatcaaggcagcaccaaatgtgacgcgtccttttagggatttcttgcacattaccatcctctattcttaagcagaattctcccga |
7749619 |
T |
|
| Q |
208 |
cactgattttgctaaatcgttaacaagatc |
237 |
Q |
| |
|
|||||||||||||||||| || |||||||| |
|
|
| T |
7749620 |
cactgattttgctaaatcattgacaagatc |
7749649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 111 - 243
Target Start/End: Complemental strand, 8569478 - 8569343
Alignment:
| Q |
111 |
caccatcttttaattcaagagagc---accaaatgtgacgtgtcctttcaggaatatcttgctcccaatcaccctctattctcaaacaaaattctcctga |
207 |
Q |
| |
|
|||||||||| || |||||||||| ||||||| |||||||||||||||| ||||||||| || ||||||||| ||| || |||||||||| || |
|
|
| T |
8569478 |
caccatctttcaaatcaagagagccacaccaaatatgacgtgtcctttcagatatatcttgcagcctatcaccctcaatttgtaagcaaaattctcgaga |
8569379 |
T |
|
| Q |
208 |
cactgattttgctaaatcgttaacaagatcatgcat |
243 |
Q |
| |
|
|||||||||| ||||| ||||||||||||||||| |
|
|
| T |
8569378 |
ttctgattttgccaaatcattaacaagatcatgcat |
8569343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 243
Target Start/End: Original strand, 6244811 - 6244946
Alignment:
| Q |
108 |
tatcaccatcttttaattcaagagagcaccaaatgtgacgtgtcctttcaggaatatcttgctcccaatcaccctctattctcaaacaaaattctcctga |
207 |
Q |
| |
|
|||||||||||| || ||||| |||||||||||||||||||||||| ||| ||||||||| | |||||||||||| || || ||||||||||| |
|
|
| T |
6244811 |
tatcaccatcttccaaatcaaggcagcaccaaatgtgacgtgtcctttgagggatatcttgcactttcacaccctctattcgtaagcagaattctcctga |
6244910 |
T |
|
| Q |
208 |
cactgattttgctaaatcgttaacaagatcatgcat |
243 |
Q |
| |
|
|| |||| | |||||||| | |||||||||||||| |
|
|
| T |
6244911 |
cattgatgtcgctaaatcatggacaagatcatgcat |
6244946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 6520632 - 6520558
Alignment:
| Q |
177 |
caccctctattctcaaacaaaattctcctgacactgattttgctaaatcgttaacaagatcatgcataacaaagt |
251 |
Q |
| |
|
||||||||||| || ||||||||||| ||||||||||||||||||||| || |||||||||||||| ||| ||| |
|
|
| T |
6520632 |
caccctctatttgcatacaaaattctcttgacactgattttgctaaatcattgacaagatcatgcatgacatagt |
6520558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 243
Target Start/End: Original strand, 6258720 - 6258855
Alignment:
| Q |
108 |
tatcaccatcttttaattcaagagagcaccaaatgtgacgtgtcctttcaggaatatcttgctcccaatcaccctctattctcaaacaaaattctcctga |
207 |
Q |
| |
|
|||||||||||| || ||||| ||||||||||||||||||||||| ||| ||||||||| | |||||||||||| || || ||||||||||| |
|
|
| T |
6258720 |
tatcaccatcttccaaatcaaggcggcaccaaatgtgacgtgtcctttgagggatatcttgcactttcacaccctctattcgtaagcagaattctcctga |
6258819 |
T |
|
| Q |
208 |
cactgattttgctaaatcgttaacaagatcatgcat |
243 |
Q |
| |
|
|| |||| | |||||||| || | |||||||||||| |
|
|
| T |
6258820 |
cattgatgtcgctaaatcattgataagatcatgcat |
6258855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 188
Target Start/End: Original strand, 6168409 - 6168489
Alignment:
| Q |
108 |
tatcaccatcttttaattcaagagagcaccaaatgtgacgtgtcctttcaggaatatcttgctcccaatcaccctctattc |
188 |
Q |
| |
|
|||||||||||| || ||||| |||||||||||||||||||||||| ||| ||||||||| | |||||||||||||| |
|
|
| T |
6168409 |
tatcaccatcttccaaatcaaggcagcaccaaatgtgacgtgtcctttgagggatatcttgcacgttatcaccctctattc |
6168489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 108 - 243
Target Start/End: Complemental strand, 13271064 - 13270929
Alignment:
| Q |
108 |
tatcaccatcttttaattcaagagagcaccaaatgtgacgtgtcctttcaggaatatcttgctcccaatcaccctctattctcaaacaaaattctcctga |
207 |
Q |
| |
|
|||||||||||| || ||||| |||||||||||||||||||||||| ||| |||| |||| | |||||||||||| || || ||||| ||||| |
|
|
| T |
13271064 |
tatcaccatcttccaaatcaaggcagcaccaaatgtgacgtgtcctttgagggatatattgcactttcacaccctctattcgtaagcagaattcccctga |
13270965 |
T |
|
| Q |
208 |
cactgattttgctaaatcgttaacaagatcatgcat |
243 |
Q |
| |
|
|| |||| | |||||||| | |||||||||||||| |
|
|
| T |
13270964 |
cattgatgtcgctaaatcatggacaagatcatgcat |
13270929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 308 - 394
Target Start/End: Original strand, 6265421 - 6265507
Alignment:
| Q |
308 |
aagaattcattacccaactcttcttcagttttgtcaattctgcagcacttcaacaaaccttctgccatccaaagcttgattaattca |
394 |
Q |
| |
|
||||||||||| || |||||||||| |||||| ||| ||| || || |||||||||||||||||||||||| ||||||||||| |
|
|
| T |
6265421 |
aagaattcattccctaactcttctttgcttttgtttcttccgcaacaatttaacaaaccttctgccatccaaagcctgattaattca |
6265507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 6946865 - 6946915
Alignment:
| Q |
193 |
acaaaattctcctgacactgattttgctaaatcgttaacaagatcatgcat |
243 |
Q |
| |
|
|||||||||||||||||||||||| | |||||| || |||||||||||||| |
|
|
| T |
6946865 |
acaaaattctcctgacactgatttggataaatcattgacaagatcatgcat |
6946915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 252
Target Start/End: Original strand, 6265301 - 6265353
Alignment:
| Q |
200 |
tctcctgacactgattttgctaaatcgttaacaagatcatgcataacaaagta |
252 |
Q |
| |
|
||||||||||||||||| |||||||| || |||||||||||||| | |||||| |
|
|
| T |
6265301 |
tctcctgacactgatttcgctaaatcattgacaagatcatgcatgataaagta |
6265353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0425 (Bit Score: 141; Significance: 2e-73; HSPs: 1)
Name: scaffold0425
Description:
Target: scaffold0425; HSP #1
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 143 - 903
Target Start/End: Complemental strand, 7966 - 7206
Alignment:
| Q |
143 |
tgacgtgtcctttcaggaatatcttgctcccaatcaccctctattctcaaacaaaattctcctgacactgattttgctaaatcgttaacaagatcatgca |
242 |
Q |
| |
|
||||||||||||||| ||| ||| | ||| | ||||||||||| ||||||||||||||||||||||||||||| |||||| || ||||||||||||| |
|
|
| T |
7966 |
tgacgtgtcctttcattgataccttccaccctagcaccctctatttgcaaacaaaattctcctgacactgattttgttaaatcattgacaagatcatgca |
7867 |
T |
|
| Q |
243 |
taacaaagtacttgtaatcaacatatcctgatcgttgaaaaaatgaaactgattctagatcgtcaaagaattcattacccaactcttcttcagttttgtc |
342 |
Q |
| |
|
| ||| ||| || || | || || ||| |||| |||||||||| ||| || ||||| | || | |||||| || |||||||||||| ||||||| |
|
|
| T |
7866 |
tgacatagtgctcatatggatcaaat---gattgttggaaaaatgaaattgactcaagatcaccgaaaatttcattgccaaactcttcttcacttttgtc |
7770 |
T |
|
| Q |
343 |
aattctgcagcacttcaacaaaccttctgccatccaaagcttgattaattcagccttgcaaaaaatataacctcttggaaatatggaacaataagaaaaa |
442 |
Q |
| |
|
|| ||| ||||||| |||||||||| |||||||||||||||| ||| | | || ||| |||| || | ||||| ||||||||||| ||||| |
|
|
| T |
7769 |
tgatccgcaacacttcagcaaaccttctcccatccaaagcttgatcaatacttctttttcaaatctatagcccttgggaaaaatggaacaataggaaaag |
7670 |
T |
|
| Q |
443 |
caacgcttcagatttgaagggagatgatggaaactcaacctcaaaactgagttaatgttactctcaccctctgataaacaccacagatctgtctccaata |
542 |
Q |
| |
|
|||||| | |||| |||||||||| |||| ||||||| |||| |||||||||||| | || || |||||||||| ||||| || |||||||||| |
|
|
| T |
7669 |
caacgccttagatcagaagggagattatggtaactcaatctcagtactgagttaatggtgtgatccccgtctgataaacgccacatgtcggtctccaata |
7570 |
T |
|
| Q |
543 |
tcttaacccattcacgttgagagaattttcttcgcaagagattccccaatgtttttagagctaaaggcaaccctccacacttttctacgattttcttgcc |
642 |
Q |
| |
|
|||||| ||||||| ||| ||| |||||||| |||| || | |||||| ||||| |||||||||||||||||||||||| || || |||||||| || |
|
|
| T |
7569 |
tcttaatccattcatgttcagaaaattttctacgcagaagttgtgccaatgattttatagctaaaggcaaccctccacacttgtccactattttcttccc |
7470 |
T |
|
| Q |
643 |
aattgattcaagatttggatattcacttgcatttgtgccgtgaaaagcgtgtctcataaacatactccaacattcactcttctccaattgcttcaaatga |
742 |
Q |
| |
|
||||| |||||||||||||||||||| || || | || |||||||| ||| ||| ||| | |||||||| | || || |||||||| | |||| | |
|
|
| T |
7469 |
aattgtttcaagatttggatattcacacacactttttccttgaaaagcatgtgtcacaaataatctccaacaattgcttttttccaattgttgtaaatca |
7370 |
T |
|
| Q |
743 |
agaagtttggtggactt-----catgactgatgctacctccttgtcacgtgttgtcacaataatcttacttccggtagatccattgttaaaaggaagtag |
837 |
Q |
| |
|
| | |||||| || || |||||| ||||||||||||| |||||||||||||| ||||| |||||||| | |||||||| |||||| |||||||| |
|
|
| T |
7369 |
aataatttggttgattttagaacatgac--atgctacctccttttcacgtgttgtcacgataattttacttccagaagatccatggttaaacggaagtag |
7272 |
T |
|
| Q |
838 |
taagcgctcccaacattccgcactaccgttccagacatcatccaaaacaagcagatatttctttcc |
903 |
Q |
| |
|
|| |||||||| |||| |||| || ||||| | |||||| |||||||||| ||||||||||| |
|
|
| T |
7271 |
tagctgctcccaatattctacactcccattccatatatcatctaaaacaagcaagtatttctttcc |
7206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 141; Significance: 2e-73; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 134 - 480
Target Start/End: Complemental strand, 25242636 - 25242288
Alignment:
| Q |
134 |
caccaaatgtgacgtgtcctttcaggaatatcttgctcccaatcaccctctattctcaaacaaaattctcctgacactgattttgctaaatcgttaacaa |
233 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| |||| ||||||| |||||||||| |||||||||| |||||||||||||||||||| || |||| |
|
|
| T |
25242636 |
caccaaatgtgacgtgtcctttcaggaataccttgcacccagtcaccctttattctcaaataaaattctcccgacactgattttgctaaatcattgacaa |
25242537 |
T |
|
| Q |
234 |
gatcatgcataac-aaagtacttgtaatcaacatatcctgatcgttgaaaaaatgaaactgattcta-gatcgtcaaagaattcattacccaactcttct |
331 |
Q |
| |
|
|||||||| |||| ||||||||| ||||||| | || ||||||| |||||||||| || |||| ||| || || || || |||||||||||||| |
|
|
| T |
25242536 |
gatcatgcttaacaaaagtacttaaaatcaactggttctaatcgttggaaaaatgaaatcgactctattatcatcgaataactctctacccaactcttct |
25242437 |
T |
|
| Q |
332 |
tcagttttgtcaattctgcagcacttcaacaaaccttctgccatccaaagcttgattaattcagccttgcaaaaaatataacctcttggaaatatggaac |
431 |
Q |
| |
|
||| |||||| |||| || ||||||| ||| |||| ||| ||||||||||||||||||||| ||||||||||| ||||||| | ||||||||||||| |
|
|
| T |
25242436 |
tcacttttgtttgttctacaacacttcagcaagccttatgctatccaaagcttgattaattcacccttgcaaaaagcataacctttaggaaatatggaac |
25242337 |
T |
|
| Q |
432 |
aataagaaaaacaacgcttcagatttgaagggagatgatggaaactcaa |
480 |
Q |
| |
|
| ||| |||||||||||||||||| |||||||||| |||| ||||||| |
|
|
| T |
25242336 |
agtaactaaaacaacgcttcagattggaagggagattatggtaactcaa |
25242288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 517 - 722
Target Start/End: Complemental strand, 25242275 - 25242067
Alignment:
| Q |
517 |
taaacaccacagatctgtctccaatatcttaacccattcacgttgagagaattttcttcgcaagagattccccaatgtttttagagctaaaggcaaccct |
616 |
Q |
| |
|
||||||||||| || || ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||| || |
|
|
| T |
25242275 |
taaacaccacatattcgtttccaatatcttaacccattcatgttgagagaattttcttcgcaagagattccccgttgtttttacagctaaaggcaacgct |
25242176 |
T |
|
| Q |
617 |
ccacacttttctac---gattttcttgccaattgattcaagatttggatattcacttgcatttgtgccgtgaaaagcgtgtctcataaacatactccaac |
713 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||| || ||| ||||| |||||||| |
|
|
| T |
25242175 |
ccacacttttctactattattttcttgccaattgatgcaagatttggatattcacttgcattccttccgtgaaaagcatgcctctcaaacacactccaac |
25242076 |
T |
|
| Q |
714 |
attcactct |
722 |
Q |
| |
|
| ||||||| |
|
|
| T |
25242075 |
aatcactct |
25242067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 138; Significance: 1e-71; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 126 - 892
Target Start/End: Complemental strand, 6573807 - 6573038
Alignment:
| Q |
126 |
caagagagcaccaaatgtgacgtgtcctttcaggaatatcttgctcccaatcaccctctattctcaaacaaaattctcctgacactgattttgctaaatc |
225 |
Q |
| |
|
|||| ||||||||||| |||||||||||||||| ||||||||| ||| ||||||||| ||| || ||||||| | ||| ||||||| |||||||| |
|
|
| T |
6573807 |
caagggagcaccaaatatgacgtgtcctttcagatatatcttgcaccctatcaccctcaatttgtaagcaaaatttttgggactctgatttagctaaatc |
6573708 |
T |
|
| Q |
226 |
gttaacaagatcatgcataacaaagtacttgtaatcaacatatc----ctgatcgttgaaaaaatgaaactgattctagatcgtcaaagaattcattacc |
321 |
Q |
| |
|
|| |||||||||||||| || | | | | ||| ||||| ||||| |||| |||||||||| || |||||||| || |||||||||||||| |
|
|
| T |
6573707 |
atttacaagatcatgcatgcataatcccatatgaccaa-atatcgactctgattgttggaaaaatgaaatggactctagatcatccaagaattcattacc |
6573609 |
T |
|
| Q |
322 |
caactcttcttcagttttgtcaattctgcagcacttcaacaaaccttctgccatccaaagcttgattaattcagccttgcaaaaaatataacctcttgga |
421 |
Q |
| |
|
|||||||| |||| ||||||| ||| ||| || |||| ||||||||| ||||||||||| ||||| |||||| | || ||| ||||||| | ||| |
|
|
| T |
6573608 |
caactcttgttcacttttgtctcttccgcaacatttcagcaaaccttcagccatccaaaggttgatcaattcatctttttcaaatttataacccttggga |
6573509 |
T |
|
| Q |
422 |
aatatggaacaataagaaaaacaacgcttcagatttgaagggagatgatggaaactcaacctcaaaactgagttaatgttactctcaccctctgataaac |
521 |
Q |
| |
|
|||||||||||||| | |||||||||||| ||||| |||||||||| ||| ||||||| ||||| || |||||||| | | | |||| |||| | |
|
|
| T |
6573508 |
aatatggaacaatatgcaaaacaacgctttagattggaagggagattatgataactcaatctcaataccgagttaatttcatcattgcccttcgatacat |
6573409 |
T |
|
| Q |
522 |
accacagatctgtctccaatatcttaacccattcacgttgagagaattttcttcgcaagagattccccaatgtttttagagctaaaggcaaccctccaca |
621 |
Q |
| |
|
||||| ||| || ||||||||||||| |||||||| ||||| ||||||||| |||||||||||||||||||||| | |||||||||||||||||||| |
|
|
| T |
6573408 |
gccacatatcagtttccaatatcttaaaccattcaccctgagaaaattttctttgcaagagattccccaatgttttcacggctaaaggcaaccctccaca |
6573309 |
T |
|
| Q |
622 |
cttttctacgattttcttgccaattgattcaagatttggatattcacttgcatttgtgccgtgaaaagcgtgtctcataaacatactccaacattcactc |
721 |
Q |
| |
|
|| ||||| || | ||||||||| ||||||||||||||||| ||| ||||| | || ||||||| ||| ||| ||| | ||||||||| || || |
|
|
| T |
6573308 |
tttgtctacaatctccttgccaatcgattcaagatttggatagtcaaacacattttttcctcgaaaagcatgtttcacaaataaactccaacaatctttc |
6573209 |
T |
|
| Q |
722 |
ttctccaattgcttcaaatgaagaagtttggtggacttcatgactgatgctacctccttgtcacgtgttgtcacaataatcttacttccggtagatccat |
821 |
Q |
| |
|
| |||||| | ||| ||| |||| | | | || |||||||| |||| || | |||||||||||||||||||||||||| ||||| | |||||| |
|
|
| T |
6573208 |
tcctccaaattctttaaaagaagttgatggtcagatttcatgaccaatgcaacgtttttgtcacgtgttgtcacaataatcttgcttcctaaaaatccat |
6573109 |
T |
|
| Q |
822 |
tgttaaaaggaagtagtaagcgctcccaacattccgcactaccgttccagacatcatccaaaacaagcaga |
892 |
Q |
| |
|
||| |||| ||||||||| ||||| |||| ||| || | || ||||| |||||||| | |||||||||| |
|
|
| T |
6573108 |
ggttgaaagaaagtagtaattgctccaaacactcctcattccctttccacacatcatctagaacaagcaga |
6573038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 56; Significance: 1e-22; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 308 - 667
Target Start/End: Complemental strand, 35140671 - 35140303
Alignment:
| Q |
308 |
aagaattcattacccaactcttcttcagttttgtcaattctgcagcacttcaacaaaccttctgccatccaaagcttgattaattcagccttgcaaaaaa |
407 |
Q |
| |
|
||||||| ||||||||||||||||||| ||||| | ||| || | ||| | ||||||||||| ||||||||||||||||||| || | || ||| |
|
|
| T |
35140671 |
aagaatttattacccaactcttcttcatttttggctatttcccaaccctttagcaaaccttctgtcatccaaagcttgattaatccatcattttcaaact |
35140572 |
T |
|
| Q |
408 |
tataacctcttggaaatatggaacaataagaaaaacaacgcttcagatttgaagggagatgatggaaactcaacctcaaaactgagttaatgttactc-- |
505 |
Q |
| |
|
|||||| | |||||||| ||| |||| | ||||||| |||||||||| |||||||| | || |||||| |||| ||| || | | |||| || |
|
|
| T |
35140571 |
cataacccttgggaaatatagaataatatgcaaaacaatgcttcagattggaagggaggctaaggtaactcattctcagaacggaataattgttgctgct |
35140472 |
T |
|
| Q |
506 |
-tcaccctctgataaacaccacagatctgtctccaatatcttaacccattcacgttgagagaattttcttcgcaagagattccccaatgtttttagagct |
604 |
Q |
| |
|
||||||| | ||||| || || ||| |||||||||||||||||||||||| || |||||||||||| |||||||| |||||| |||||| |||||| |
|
|
| T |
35140471 |
gtcacccttgggtaaacgccgcaaatcagtctccaatatcttaacccattcattttcggagaattttctttgcaagagaatccccagtgttttcagagct |
35140372 |
T |
|
| Q |
605 |
aaaggcaacc------ctccacacttttctacgattttcttgccaattgattcaagatttggatattca |
667 |
Q |
| |
|
|||| |||| | ||||| |||||||| | |||| | ||||| | ||||||||||||||||||| |
|
|
| T |
35140371 |
aaagataacccccccaccccacatttttctactagtttcataccaatcgtttcaagatttggatattca |
35140303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 169
Target Start/End: Complemental strand, 35140883 - 35140822
Alignment:
| Q |
108 |
tatcaccatcttttaattcaagagagcaccaaatgtgacgtgtcctttcaggaatatcttgc |
169 |
Q |
| |
|
|||||||||||| || ||||| ||||||||||||||| |||||||| ||| ||||||||| |
|
|
| T |
35140883 |
tatcaccatcttccaaatcaaggcagcaccaaatgtgacatgtcctttgagggatatcttgc |
35140822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0958 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0958
Description:
Target: scaffold0958; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 243
Target Start/End: Complemental strand, 363 - 253
Alignment:
| Q |
133 |
gcaccaaatgtgacgtgtcctttcaggaatatcttgctcccaatcaccctctattctcaaacaaaattctcctgacactgattttgctaaatcgttaaca |
232 |
Q |
| |
|
|||| |||| ||||||||||||| | ||||| ||| ||| ||||||||| ||| || ||||||| || ||| |||||||||| ||||| |||||| |
|
|
| T |
363 |
gcactaaatatgacgtgtcctttttgatatatcgtgcaccctatcaccctcaatttgtaagcaaaattgtcgagactctgattttgccaaatcattaaca |
264 |
T |
|
| Q |
233 |
agatcatgcat |
243 |
Q |
| |
|
||||||||||| |
|
|
| T |
263 |
agatcatgcat |
253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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