View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19539_low_36 (Length: 227)
Name: NF19539_low_36
Description: NF19539
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19539_low_36 |
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Alignment Details
Target: chr8 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 32402051 - 32401848
Alignment:
| Q |
1 |
aaatcgatggggtaggaaattttgtgacttactgattggaaagttccaagaagaaaaaatgagaacaacaccaagtggttctggcagtaactctcctttt |
100 |
Q |
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|||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32402051 |
aaatcggtggggtaggaaatgttgtgacttactgattggaaagttccaagaagaaaaaatgagaacaacaccaagtggttctggcagtaactctcctttt |
32401952 |
T |
|
| Q |
101 |
gctgggaagaaaaccaaaggaatattgctctgcaatattatccataataacagtgaaaataattaggcataataagtccaacaacaaaagtatggacaac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32401951 |
gctgggaagaaaaccaaaggaatattgctctgcaatattatccataataacagtgaaaataattaggcataataagtccaacaacaaaagtatggacaac |
32401852 |
T |
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| Q |
201 |
ttgt |
204 |
Q |
| |
|
|||| |
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| T |
32401851 |
ttgt |
32401848 |
T |
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