View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19540_high_9 (Length: 252)
Name: NF19540_high_9
Description: NF19540
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19540_high_9 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 15 - 252
Target Start/End: Original strand, 45105986 - 45106223
Alignment:
| Q |
15 |
aatattgccggaaacatttgtatcttcaacctagacttggcttaccttacatattactgttttccttattgtgcagctgtcaattatgttgccatatctg |
114 |
Q |
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| T |
45105986 |
aatattgccggaaacatttgtatcttcaacctagacttggcttaccttacatattactgttttccttattgtgcagctgtcaattatgttgccatatctg |
45106085 |
T |
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| Q |
115 |
atgctcttggtgttcccccctcaattttagctgctggcttagctgcagataatgttatttgtgcagtgtatttttcaacattgtttctattggcctctaa |
214 |
Q |
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| T |
45106086 |
atgctcttggtgttcccccctcaattttagctgctggcttagctgcggataatgttatttgtgcagtgtatttttcaacattgtttctattggcctctaa |
45106185 |
T |
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| Q |
215 |
agtacctccggagtcctcagcttcagtaaatggtagtt |
252 |
Q |
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| T |
45106186 |
agtacctccggagtcctcagcttcagtaaatggtagtt |
45106223 |
T |
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