View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19540_low_8 (Length: 259)
Name: NF19540_low_8
Description: NF19540
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19540_low_8 |
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Alignment Details
Target: chr1 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 17 - 247
Target Start/End: Complemental strand, 45106708 - 45106478
Alignment:
| Q |
17 |
aaatctacactttggagtttcagcaaaatgacggtgccaccgtaagttcgccaaactaaccggcaatccaaacatattaagtgaaaaaacctgtccacga |
116 |
Q |
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| T |
45106708 |
aaatctacactttggagtttcagcaaaatgacggtgccaccgtaagttcgccaaactaaccggcaatccaaacatattaagtgcaaaaacctgtccacga |
45106609 |
T |
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| Q |
117 |
tgaataacaaccaacctgtatgagaatcacggccatagcttcaccagagggtgcaagagaagcaaatggtttgggaaatacagttgcaaatattacagca |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45106608 |
tgaataacaaccaacctgtatgagaatcacggccatagcttcaccagagggtgcaagagaagcaaatggtttgggaaatacagttgcaaatattacagca |
45106509 |
T |
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| Q |
217 |
attgctgttaccaatggcagattaccccctt |
247 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
45106508 |
attgctgttaccaatggcagattaccccctt |
45106478 |
T |
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