View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19544_high_2 (Length: 317)

Name: NF19544_high_2
Description: NF19544
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19544_high_2
NF19544_high_2
[»] chr4 (82 HSPs)
chr4 (18-230)||(47867817-47868030)
chr4 (18-230)||(2229185-2229398)
chr4 (21-230)||(20281534-20281742)
chr4 (18-230)||(14332697-14332911)
chr4 (73-230)||(4058709-4058866)
chr4 (22-230)||(26916267-26916476)
chr4 (18-230)||(41414612-41414823)
chr4 (73-230)||(29203500-29203657)
chr4 (18-226)||(56318075-56318285)
chr4 (73-230)||(39078151-39078307)
chr4 (73-230)||(10069691-10069848)
chr4 (73-230)||(20716174-20716331)
chr4 (73-230)||(55580663-55580821)
chr4 (95-230)||(7654633-7654768)
chr4 (95-230)||(16604847-16604982)
chr4 (79-230)||(24940365-24940516)
chr4 (18-230)||(28669002-28669214)
chr4 (73-230)||(17794542-17794699)
chr4 (73-230)||(5483279-5483436)
chr4 (73-230)||(35310743-35310900)
chr4 (73-230)||(42915523-42915681)
chr4 (73-226)||(1585354-1585505)
chr4 (73-230)||(48793631-48793784)
chr4 (73-230)||(8683307-8683462)
chr4 (84-208)||(5815474-5815598)
chr4 (73-167)||(35529666-35529760)
chr4 (83-205)||(8178265-8178387)
chr4 (73-162)||(52535654-52535743)
chr4 (85-230)||(32203226-32203364)
chr4 (83-200)||(46070553-46070668)
chr4 (159-230)||(16473828-16473899)
chr4 (83-206)||(47516216-47516339)
chr4 (83-205)||(5841805-5841927)
chr4 (84-230)||(19351851-19352003)
chr4 (73-215)||(32323278-32323419)
chr4 (73-230)||(50080457-50080609)
chr4 (83-230)||(5064656-5064803)
chr4 (73-167)||(25297286-25297380)
chr4 (137-230)||(21722683-21722776)
chr4 (74-209)||(50145731-50145865)
chr4 (73-230)||(14583723-14583880)
chr4 (76-205)||(17186822-17186940)
chr4 (73-219)||(31280193-31280329)
chr4 (73-230)||(12002634-12002793)
chr4 (123-225)||(32280009-32280111)
chr4 (88-230)||(17799135-17799277)
chr4 (83-177)||(23978169-23978263)
chr4 (83-205)||(37911888-37912010)
chr4 (83-201)||(49080261-49080379)
chr4 (144-205)||(29511490-29511551)
chr4 (83-203)||(32410332-32410452)
chr4 (83-230)||(8013090-8013237)
chr4 (83-205)||(28318445-28318565)
chr4 (83-201)||(28142652-28142769)
chr4 (123-226)||(25268523-25268626)
chr4 (84-167)||(40553774-40553857)
chr4 (23-61)||(7654570-7654608)
chr4 (82-207)||(30011951-30012074)
chr4 (18-55)||(29203414-29203451)
chr4 (83-205)||(53848471-53848586)
chr4 (18-53)||(17186992-17187027)
chr4 (18-52)||(16605046-16605080)
chr4 (18-52)||(35529578-35529612)
chr4 (18-52)||(42915436-42915470)
chr4 (73-114)||(32280104-32280145)
chr4 (123-226)||(37872657-37872757)
chr4 (18-51)||(55580574-55580607)
chr4 (82-206)||(5222291-5222415)
chr4 (18-53)||(4058621-4058656)
chr4 (191-230)||(7438760-7438799)
chr4 (18-53)||(10069603-10069638)
chr4 (18-53)||(39078064-39078099)
chr4 (82-177)||(40411104-40411199)
chr4 (22-52)||(29180576-29180606)
chr4 (144-230)||(31532454-31532540)
chr4 (22-52)||(32012491-32012521)
chr4 (18-52)||(48793837-48793871)
chr4 (82-207)||(10591500-10591625)
chr4 (73-114)||(21722783-21722824)
chr4 (23-52)||(35310954-35310983)
chr4 (24-52)||(8683515-8683543)
chr4 (122-230)||(38140713-38140821)
[»] chr8 (73 HSPs)
chr8 (18-230)||(7022412-7022625)
chr8 (18-230)||(7858466-7858679)
chr8 (73-230)||(34890183-34890340)
chr8 (73-230)||(36190766-36190923)
chr8 (72-230)||(26483525-26483683)
chr8 (73-230)||(43216356-43216513)
chr8 (73-219)||(31734109-31734255)
chr8 (73-230)||(15957920-15958079)
chr8 (73-225)||(28348605-28348756)
chr8 (18-230)||(41086395-41086609)
chr8 (73-226)||(8107630-8107783)
chr8 (73-230)||(24892832-24892992)
chr8 (73-214)||(8711870-8712011)
chr8 (73-219)||(13143758-13143904)
chr8 (73-226)||(34158303-34158457)
chr8 (73-226)||(35456038-35456190)
chr8 (87-230)||(30575843-30575987)
chr8 (95-230)||(35525603-35525736)
chr8 (73-230)||(8709795-8709950)
chr8 (111-230)||(13143954-13144073)
chr8 (73-230)||(29920277-29920434)
chr8 (73-170)||(7499720-7499818)
chr8 (73-230)||(16879401-16879558)
chr8 (73-230)||(15824646-15824797)
chr8 (73-220)||(4046912-4047060)
chr8 (78-168)||(3642041-3642130)
chr8 (83-205)||(8673385-8673507)
chr8 (73-183)||(2052830-2052938)
chr8 (83-230)||(17713227-17713374)
chr8 (110-226)||(16358125-16358240)
chr8 (83-190)||(26954441-26954548)
chr8 (83-230)||(41362316-41362463)
chr8 (85-230)||(38072169-38072314)
chr8 (83-205)||(2628198-2628320)
chr8 (83-201)||(25195085-25195202)
chr8 (83-230)||(8745587-8745734)
chr8 (83-205)||(17336746-17336868)
chr8 (83-200)||(4038920-4039037)
chr8 (73-187)||(41755920-41756033)
chr8 (75-230)||(44663801-44663953)
chr8 (84-204)||(5217397-5217517)
chr8 (83-230)||(27819663-27819810)
chr8 (145-215)||(4480841-4480911)
chr8 (124-205)||(28497172-28497253)
chr8 (73-115)||(13144085-13144127)
chr8 (144-194)||(14693434-14693484)
chr8 (138-215)||(6401679-6401756)
chr8 (73-192)||(33563558-33563681)
chr8 (82-207)||(34713532-34713657)
chr8 (18-55)||(34890390-34890427)
chr8 (88-152)||(7670749-7670813)
chr8 (83-230)||(17314834-17314981)
chr8 (18-52)||(4047113-4047147)
chr8 (132-230)||(8712577-8712675)
chr8 (83-140)||(14576244-14576301)
chr8 (21-53)||(24892748-24892780)
chr8 (83-179)||(29147297-29147393)
chr8 (171-230)||(2052955-2053014)
chr8 (18-53)||(13143671-13143706)
chr8 (22-53)||(13144179-13144210)
chr8 (18-53)||(30576045-30576080)
chr8 (18-53)||(35525505-35525540)
chr8 (18-53)||(36190678-36190713)
chr8 (143-230)||(40773412-40773499)
chr8 (195-230)||(45190700-45190735)
chr8 (22-52)||(36537990-36538020)
chr8 (22-52)||(41809022-41809052)
chr8 (97-158)||(374103-374162)
chr8 (145-230)||(3225529-3225617)
chr8 (181-230)||(7499817-7499866)
chr8 (193-230)||(11158675-11158712)
chr8 (86-199)||(24510735-24510848)
chr8 (82-167)||(31133101-31133186)
[»] chr7 (61 HSPs)
chr7 (18-230)||(14805810-14806022)
chr7 (18-230)||(15252804-15253016)
chr7 (18-230)||(46760264-46760478)
chr7 (18-230)||(25737634-25737847)
chr7 (18-230)||(18102469-18102683)
chr7 (18-230)||(45485893-45486108)
chr7 (19-230)||(19912776-19912988)
chr7 (18-230)||(35923192-35923404)
chr7 (73-230)||(6191041-6191198)
chr7 (73-226)||(20123691-20123844)
chr7 (73-230)||(25944572-25944729)
chr7 (73-230)||(4910642-4910797)
chr7 (73-230)||(47779600-47779757)
chr7 (73-230)||(22632085-22632242)
chr7 (73-214)||(47557622-47557765)
chr7 (111-226)||(12632355-12632470)
chr7 (73-230)||(11780014-11780170)
chr7 (73-230)||(14574560-14574717)
chr7 (73-230)||(44682874-44683030)
chr7 (73-192)||(9158086-9158204)
chr7 (73-230)||(15995715-15995873)
chr7 (73-219)||(2610586-2610732)
chr7 (79-230)||(48413723-48413866)
chr7 (73-213)||(35068872-35068999)
chr7 (83-205)||(39170540-39170662)
chr7 (72-231)||(4237720-4237880)
chr7 (73-226)||(16917468-16917620)
chr7 (74-169)||(27810803-27810898)
chr7 (83-206)||(38260322-38260445)
chr7 (18-114)||(12633110-12633207)
chr7 (98-204)||(31549936-31550042)
chr7 (83-205)||(31768994-31769116)
chr7 (95-178)||(8015732-8015813)
chr7 (82-230)||(35084067-35084215)
chr7 (84-179)||(24151640-24151734)
chr7 (83-230)||(35887976-35888123)
chr7 (117-183)||(4069043-4069109)
chr7 (84-230)||(37767026-37767172)
chr7 (82-230)||(33153039-33153187)
chr7 (18-55)||(25944485-25944522)
chr7 (18-106)||(16562688-16562778)
chr7 (18-106)||(16602884-16602974)
chr7 (73-230)||(19492400-19492559)
chr7 (82-230)||(40560382-40560530)
chr7 (143-205)||(10248594-10248657)
chr7 (82-201)||(21654116-21654235)
chr7 (18-57)||(47557928-47557967)
chr7 (83-205)||(3777984-3778106)
chr7 (84-213)||(29713196-29713325)
chr7 (82-199)||(30082353-30082470)
chr7 (74-121)||(4068972-4069020)
chr7 (84-164)||(22369233-22369313)
chr7 (21-57)||(39174193-39174229)
chr7 (84-206)||(33092669-33092792)
chr7 (18-52)||(18800919-18800953)
chr7 (174-220)||(31280546-31280592)
chr7 (18-52)||(47778681-47778715)
chr7 (82-207)||(3157436-3157561)
chr7 (19-52)||(9158000-9158033)
chr7 (82-135)||(41890303-41890356)
chr7 (21-53)||(44682784-44682816)
[»] chr6 (27 HSPs)
chr6 (18-230)||(21542358-21542571)
chr6 (18-230)||(35129062-35129276)
chr6 (72-230)||(11082253-11082411)
chr6 (18-230)||(3095728-3095942)
chr6 (21-226)||(34177653-34177859)
chr6 (73-230)||(7274883-7275040)
chr6 (73-230)||(12461437-12461594)
chr6 (73-230)||(30794200-30794357)
chr6 (73-207)||(31107187-31107320)
chr6 (73-226)||(17751756-17751909)
chr6 (83-205)||(4031991-4032113)
chr6 (83-205)||(4987947-4988069)
chr6 (83-205)||(16524384-16524505)
chr6 (73-151)||(9428766-9428844)
chr6 (87-205)||(16013465-16013583)
chr6 (83-205)||(3888431-3888553)
chr6 (73-230)||(14573136-14573293)
chr6 (82-207)||(17598294-17598419)
chr6 (178-230)||(9428846-9428898)
chr6 (82-206)||(21963958-21964082)
chr6 (137-179)||(5300659-5300701)
chr6 (84-202)||(16870828-16870947)
chr6 (144-230)||(15830760-15830846)
chr6 (149-230)||(5822042-5822123)
chr6 (118-230)||(5881760-5881872)
chr6 (123-226)||(14709795-14709899)
chr6 (81-169)||(26540253-26540341)
[»] scaffold0300 (1 HSPs)
scaffold0300 (21-230)||(581-791)
[»] chr1 (91 HSPs)
chr1 (18-230)||(32624013-32624227)
chr1 (18-226)||(39555598-39555807)
chr1 (18-220)||(12448985-12449188)
chr1 (21-230)||(24190414-24190622)
chr1 (73-230)||(15959648-15959805)
chr1 (75-230)||(2126036-2126191)
chr1 (72-230)||(35691387-35691546)
chr1 (73-230)||(6785452-6785608)
chr1 (73-230)||(6786834-6786991)
chr1 (73-230)||(40718674-40718831)
chr1 (73-230)||(33369549-33369703)
chr1 (22-222)||(43667319-43667517)
chr1 (19-230)||(32983180-32983390)
chr1 (73-230)||(45226134-45226291)
chr1 (18-230)||(42965824-42966034)
chr1 (73-230)||(28016754-28016909)
chr1 (73-230)||(39932580-39932737)
chr1 (23-230)||(28120763-28120970)
chr1 (73-230)||(47014501-47014655)
chr1 (73-230)||(46542980-46543135)
chr1 (73-230)||(7467970-7468128)
chr1 (81-226)||(13136566-13136708)
chr1 (73-230)||(1820411-1820568)
chr1 (73-226)||(47600048-47600204)
chr1 (73-225)||(46818515-46818667)
chr1 (73-226)||(2246026-2246179)
chr1 (73-226)||(3076291-3076444)
chr1 (73-226)||(3875031-3875186)
chr1 (123-226)||(11241073-11241176)
chr1 (73-230)||(24728634-24728792)
chr1 (73-230)||(33431557-33431712)
chr1 (73-230)||(44148844-44148997)
chr1 (73-226)||(37735395-37735548)
chr1 (98-230)||(32742210-32742342)
chr1 (76-187)||(16854139-16854250)
chr1 (73-230)||(3861703-3861858)
chr1 (73-187)||(50369954-50370071)
chr1 (74-198)||(10558796-10558920)
chr1 (73-220)||(25391680-25391824)
chr1 (83-205)||(5858404-5858526)
chr1 (73-178)||(6787050-6787154)
chr1 (73-193)||(23392211-23392330)
chr1 (73-220)||(43765290-43765438)
chr1 (123-230)||(52984979-52985086)
chr1 (83-205)||(5950445-5950567)
chr1 (83-205)||(7397712-7397834)
chr1 (89-226)||(7875952-7876091)
chr1 (73-230)||(47302916-47303071)
chr1 (73-226)||(1034854-1035004)
chr1 (83-205)||(16688142-16688264)
chr1 (123-226)||(30221771-30221874)
chr1 (83-230)||(45840074-45840220)
chr1 (83-205)||(37538815-37538937)
chr1 (169-230)||(4672923-4672984)
chr1 (83-206)||(8889729-8889845)
chr1 (111-226)||(32318571-32318687)
chr1 (73-226)||(50012587-50012727)
chr1 (95-230)||(298676-298812)
chr1 (83-201)||(25185341-25185459)
chr1 (83-205)||(44510252-44510374)
chr1 (91-157)||(14086966-14087030)
chr1 (99-230)||(30701393-30701524)
chr1 (83-230)||(35366211-35366358)
chr1 (84-230)||(52841453-52841599)
chr1 (85-165)||(47026655-47026736)
chr1 (83-186)||(15912204-15912307)
chr1 (83-205)||(41063747-41063870)
chr1 (143-230)||(50176588-50176675)
chr1 (84-230)||(42724101-42724247)
chr1 (83-183)||(13351686-13351786)
chr1 (73-129)||(50665259-50665315)
chr1 (83-162)||(34102049-34102127)
chr1 (84-230)||(7190663-7190809)
chr1 (83-201)||(16661521-16661639)
chr1 (18-53)||(6786746-6786781)
chr1 (18-53)||(7468170-7468205)
chr1 (18-53)||(28016961-28016996)
chr1 (19-53)||(6787208-6787242)
chr1 (73-111)||(11241039-11241077)
chr1 (81-167)||(28916589-28916675)
chr1 (18-52)||(44149050-44149084)
chr1 (123-197)||(51338938-51339012)
chr1 (18-55)||(15959855-15959892)
chr1 (82-207)||(23873861-23873986)
chr1 (83-156)||(39151242-39151315)
chr1 (82-207)||(43656071-43656196)
chr1 (83-127)||(43359696-43359740)
chr1 (18-57)||(2125977-2126016)
chr1 (82-207)||(35884212-35884337)
chr1 (82-162)||(44056377-44056457)
chr1 (149-205)||(46803704-46803760)
[»] chr5 (74 HSPs)
chr5 (18-230)||(11261892-11262105)
chr5 (18-230)||(6686323-6686538)
chr5 (21-230)||(43589970-43590180)
chr5 (18-230)||(37522597-37522811)
chr5 (18-230)||(37562769-37562983)
chr5 (73-230)||(42273645-42273800)
chr5 (73-230)||(20644010-20644167)
chr5 (73-230)||(34425327-34425483)
chr5 (75-230)||(20039100-20039255)
chr5 (73-219)||(32110998-32111144)
chr5 (73-230)||(38130121-38130281)
chr5 (74-230)||(19413138-19413294)
chr5 (73-199)||(38280843-38280969)
chr5 (73-223)||(8225459-8225608)
chr5 (73-230)||(25840860-25841017)
chr5 (83-230)||(12912303-12912449)
chr5 (77-226)||(43454335-43454484)
chr5 (73-220)||(39505250-39505397)
chr5 (73-230)||(4463356-4463511)
chr5 (73-230)||(17351384-17351541)
chr5 (73-182)||(32017700-32017808)
chr5 (73-230)||(41625520-41625675)
chr5 (73-220)||(5984126-5984280)
chr5 (78-226)||(42104262-42104408)
chr5 (73-168)||(9957489-9957581)
chr5 (74-192)||(104260-104386)
chr5 (111-227)||(23233445-23233561)
chr5 (111-230)||(12792794-12792903)
chr5 (83-205)||(5369064-5369186)
chr5 (83-179)||(10153987-10154083)
chr5 (111-230)||(12729892-12730001)
chr5 (83-200)||(3463853-3463970)
chr5 (83-230)||(16153354-16153500)
chr5 (83-204)||(8959646-8959767)
chr5 (73-181)||(7071234-7071342)
chr5 (83-230)||(8506443-8506584)
chr5 (83-205)||(5736273-5736395)
chr5 (73-115)||(12730103-12730145)
chr5 (82-167)||(24439575-24439660)
chr5 (185-230)||(32019929-32019974)
chr5 (18-61)||(842744-842787)
chr5 (143-205)||(1144524-1144586)
chr5 (84-230)||(32079512-32079657)
chr5 (84-205)||(6391876-6391997)
chr5 (18-55)||(9957631-9957668)
chr5 (73-110)||(12792929-12792966)
chr5 (83-201)||(28907074-28907192)
chr5 (83-201)||(28943469-28943587)
chr5 (143-204)||(29307221-29307282)
chr5 (19-55)||(20643924-20643960)
chr5 (117-201)||(30703641-30703725)
chr5 (84-215)||(8146730-8146860)
chr5 (18-53)||(8225372-8225407)
chr5 (18-53)||(42273558-42273593)
chr5 (184-230)||(9957443-9957488)
chr5 (18-52)||(39505450-39505484)
chr5 (82-207)||(8146044-8146169)
chr5 (82-207)||(12638892-12639017)
chr5 (83-174)||(5659584-5659676)
chr5 (123-230)||(30893258-30893365)
chr5 (18-53)||(104437-104472)
chr5 (18-53)||(12730204-12730239)
chr5 (18-53)||(34425239-34425274)
chr5 (73-127)||(446000-446054)
chr5 (73-147)||(1238522-1238596)
chr5 (21-55)||(7071150-7071184)
chr5 (73-107)||(23233395-23233429)
chr5 (18-52)||(25840772-25840806)
chr5 (82-207)||(13146732-13146857)
chr5 (81-158)||(29493592-29493669)
chr5 (144-205)||(32432319-32432380)
chr5 (21-53)||(12793024-12793056)
chr5 (143-207)||(16286114-16286178)
chr5 (82-110)||(17825326-17825354)
[»] chr2 (56 HSPs)
chr2 (18-230)||(28599155-28599369)
chr2 (18-230)||(6110206-6110421)
chr2 (21-230)||(35517065-35517276)
chr2 (18-226)||(45085197-45085406)
chr2 (18-225)||(41528196-41528404)
chr2 (73-230)||(3201322-3201479)
chr2 (73-230)||(19264095-19264253)
chr2 (73-230)||(45660361-45660521)
chr2 (73-226)||(11617020-11617173)
chr2 (73-230)||(33198638-33198795)
chr2 (73-230)||(28858305-28858465)
chr2 (73-219)||(14873958-14874105)
chr2 (73-230)||(12938238-12938395)
chr2 (73-230)||(29524048-29524205)
chr2 (73-230)||(25572042-25572198)
chr2 (76-230)||(8701601-8701755)
chr2 (73-230)||(24204536-24204693)
chr2 (73-230)||(9864725-9864881)
chr2 (73-226)||(6765944-6766098)
chr2 (73-199)||(40584436-40584562)
chr2 (73-230)||(33677479-33677636)
chr2 (73-230)||(5963197-5963353)
chr2 (73-226)||(30830607-30830760)
chr2 (98-229)||(35115811-35115943)
chr2 (73-230)||(7645234-7645394)
chr2 (77-230)||(35022897-35023051)
chr2 (144-230)||(43415468-43415554)
chr2 (73-230)||(44454987-44455142)
chr2 (83-205)||(26998323-26998445)
chr2 (73-183)||(30421236-30421346)
chr2 (101-230)||(40808727-40808853)
chr2 (83-206)||(32010108-32010231)
chr2 (83-205)||(32273677-32273799)
chr2 (90-205)||(9709526-9709641)
chr2 (83-205)||(38071002-38071123)
chr2 (73-159)||(39696877-39696963)
chr2 (75-214)||(4707419-4707558)
chr2 (83-201)||(4891675-4891793)
chr2 (102-152)||(5280592-5280642)
chr2 (83-205)||(20380129-20380251)
chr2 (83-230)||(44442137-44442285)
chr2 (83-179)||(8032726-8032823)
chr2 (83-205)||(11030962-11031077)
chr2 (173-230)||(5280537-5280595)
chr2 (144-189)||(16494974-16495019)
chr2 (18-55)||(19264008-19264045)
chr2 (123-230)||(32428019-32428127)
chr2 (19-57)||(3201276-3201314)
chr2 (82-167)||(18833980-18834065)
chr2 (18-53)||(5280697-5280732)
chr2 (18-53)||(33198851-33198886)
chr2 (18-53)||(38070924-38070959)
chr2 (18-53)||(45660271-45660306)
chr2 (18-52)||(25571953-25571987)
chr2 (18-52)||(29524258-29524292)
chr2 (18-52)||(40808930-40808964)
[»] scaffold0045 (1 HSPs)
scaffold0045 (18-230)||(77897-78110)
[»] chr3 (94 HSPs)
chr3 (18-230)||(23311560-23311773)
chr3 (18-230)||(37042384-37042597)
chr3 (18-230)||(11054278-11054488)
chr3 (72-226)||(30189569-30189724)
chr3 (73-230)||(14752175-14752332)
chr3 (73-230)||(28875406-28875563)
chr3 (73-230)||(7866450-7866607)
chr3 (73-230)||(50651004-50651161)
chr3 (73-219)||(6438083-6438229)
chr3 (18-230)||(36546486-36546699)
chr3 (18-230)||(36561616-36561829)
chr3 (73-230)||(47864191-47864348)
chr3 (73-230)||(35963152-35963309)
chr3 (73-230)||(46711625-46711781)
chr3 (77-230)||(579112-579258)
chr3 (73-230)||(6075081-6075238)
chr3 (73-230)||(37074958-37075117)
chr3 (73-224)||(53270233-53270386)
chr3 (73-230)||(54464863-54465019)
chr3 (73-230)||(19464075-19464234)
chr3 (73-223)||(32619804-32619954)
chr3 (73-230)||(50730109-50730266)
chr3 (73-230)||(50782588-50782745)
chr3 (73-230)||(2927289-2927447)
chr3 (73-225)||(41476308-41476453)
chr3 (73-230)||(8703109-8703262)
chr3 (73-230)||(9054996-9055149)
chr3 (73-230)||(26208014-26208171)
chr3 (73-230)||(26724958-26725115)
chr3 (74-226)||(20847240-20847391)
chr3 (73-230)||(29235193-29235344)
chr3 (132-230)||(9264610-9264708)
chr3 (78-179)||(34722623-34722724)
chr3 (126-226)||(23910484-23910584)
chr3 (120-230)||(31836966-31837076)
chr3 (73-201)||(3972275-3972402)
chr3 (73-201)||(3997476-3997603)
chr3 (83-230)||(8096985-8097132)
chr3 (73-230)||(47115849-47116006)
chr3 (73-161)||(46557237-46557325)
chr3 (83-230)||(22479021-22479168)
chr3 (83-230)||(30454692-30454838)
chr3 (73-167)||(6752670-6752764)
chr3 (83-185)||(34194892-34194994)
chr3 (90-203)||(16032981-16033094)
chr3 (83-206)||(38401384-38401507)
chr3 (73-164)||(47866946-47867036)
chr3 (73-142)||(33974614-33974683)
chr3 (73-177)||(38674870-38674974)
chr3 (83-230)||(10114915-10115062)
chr3 (83-230)||(22455975-22456122)
chr3 (83-205)||(7886609-7886731)
chr3 (83-205)||(21214245-21214367)
chr3 (83-205)||(46918205-46918327)
chr3 (83-198)||(10252015-10252130)
chr3 (83-230)||(47443941-47444087)
chr3 (137-230)||(33973533-33973627)
chr3 (73-129)||(48802548-48802604)
chr3 (83-198)||(10014273-10014388)
chr3 (18-112)||(23910580-23910675)
chr3 (121-230)||(3084147-3084256)
chr3 (82-207)||(31126214-31126339)
chr3 (123-230)||(8769546-8769651)
chr3 (73-136)||(9264008-9264071)
chr3 (83-205)||(2994407-2994532)
chr3 (130-230)||(8764646-8764744)
chr3 (18-55)||(14752382-14752419)
chr3 (83-188)||(48291826-48291931)
chr3 (82-167)||(51426621-51426706)
chr3 (145-205)||(6784390-6784450)
chr3 (78-113)||(34722564-34722599)
chr3 (148-230)||(25242145-25242227)
chr3 (137-179)||(54725628-54725670)
chr3 (153-230)||(17587779-17587856)
chr3 (73-140)||(41936248-41936313)
chr3 (82-201)||(1335112-1335231)
chr3 (18-53)||(6074995-6075030)
chr3 (18-53)||(7866659-7866694)
chr3 (75-114)||(8769644-8769683)
chr3 (18-53)||(22479211-22479246)
chr3 (123-206)||(30612221-30612304)
chr3 (18-53)||(37074871-37074906)
chr3 (84-186)||(23209291-23209393)
chr3 (132-230)||(31292664-31292762)
chr3 (73-115)||(36509540-36509582)
chr3 (121-167)||(45868536-45868582)
chr3 (23-52)||(2927206-2927235)
chr3 (75-112)||(8764746-8764783)
chr3 (19-52)||(19463988-19464021)
chr3 (18-55)||(28875319-28875356)
chr3 (184-224)||(2878213-2878253)
chr3 (22-50)||(33974738-33974766)
chr3 (143-207)||(34022662-34022726)
chr3 (200-228)||(47866893-47866921)
[»] scaffold0774 (1 HSPs)
scaffold0774 (18-219)||(3447-3649)
[»] scaffold0442 (1 HSPs)
scaffold0442 (18-226)||(9985-10194)
[»] scaffold0018 (1 HSPs)
scaffold0018 (22-230)||(154805-155013)
[»] scaffold0062 (1 HSPs)
scaffold0062 (73-230)||(44779-44936)
[»] scaffold0132 (4 HSPs)
scaffold0132 (73-230)||(1008-1165)
scaffold0132 (73-230)||(8968-9125)
scaffold0132 (18-53)||(921-956)
scaffold0132 (18-53)||(8881-8916)
[»] scaffold0009 (3 HSPs)
scaffold0009 (73-230)||(157790-157947)
scaffold0009 (73-164)||(52676-52767)
scaffold0009 (18-52)||(157703-157737)
[»] scaffold0111 (1 HSPs)
scaffold0111 (73-220)||(40175-40321)
[»] scaffold0012 (1 HSPs)
scaffold0012 (73-203)||(160246-160376)
[»] scaffold0565 (1 HSPs)
scaffold0565 (83-206)||(5907-6030)
[»] scaffold0005 (1 HSPs)
scaffold0005 (73-230)||(233495-233652)
[»] scaffold0010 (1 HSPs)
scaffold0010 (104-205)||(160952-161053)
[»] scaffold0330 (1 HSPs)
scaffold0330 (83-205)||(3174-3296)
[»] scaffold1786 (2 HSPs)
scaffold1786 (123-193)||(893-963)
scaffold1786 (73-114)||(860-900)
[»] scaffold1157 (1 HSPs)
scaffold1157 (133-215)||(1690-1772)


Alignment Details
Target: chr4 (Bit Score: 163; Significance: 5e-87; HSPs: 82)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 18 - 230
Target Start/End: Original strand, 47867817 - 47868030
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaa-annnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctt 116  Q
    |||||||||||||||||||||||| ||||||||||||||| ||| |         |||||||||||||||||||||||||||||||||||||||||||||    
T  47867817 gtcccaaaatataagcaaaaaagaaaaacttttatctttttcaagatttttttttgttattctcataaaattaaatgcaaattacattcaattttctctt 47867916  T
Q  117 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  47867917 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattc 47868016  T
Q  217 ttatgttttagttt 230  Q
    ||||||||||||||    
T  47868017 ttatgttttagttt 47868030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 18 - 230
Target Start/End: Original strand, 2229185 - 2229398
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaa-annnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctt 116  Q
    |||||||||||||||||||||||||||||||||||||||||||| |         ||||||||||||| |||||||||||||||||||||||||||| ||    
T  2229185 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaatatttttttttgttattctcataatattaaatgcaaattacattcaattttctttt 2229284  T
Q  117 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 216  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  2229285 tctttcattttttccataaccaatagccaataaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattc 2229384  T
Q  217 ttatgttttagttt 230  Q
    ||||||||||||||    
T  2229385 ttatgttttagttt 2229398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 21 - 230
Target Start/End: Original strand, 20281534 - 20281742
Alignment:
Q  21 ccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnngtt-attctcataaaattaaatgcaaattacattcaattttctctttct 119  Q
    |||||||||||||||||||||||  ||||||||||||||||          ||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  20281534 ccaaaatataagcaaaaaagaca--cttttatcttttccaagattttttttgtttattctcataaaattaaatgcaaattacattcaattttctttttct 20281631  T
Q  120 ttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattctta 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20281632 ttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattctta 20281731  T
Q  220 tgttttagttt 230  Q
    |||||||||||    
T  20281732 tgttttagttt 20281742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 18 - 230
Target Start/End: Original strand, 14332697 - 14332911
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaa-annnnnnnnngtt-attctcataaaattaaatgcaaattacattcaattttctct 115  Q
    |||||||||||||||||||||||||||||||||||||||||||| |         ||| |||||||||||||||||||||||||||||||||||||||||    
T  14332697 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaagatttttttttgtttattctcataaaattaaatgcaaattacattcaattttctct 14332796  T
Q  116 ttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaatt 215  Q
    |||||||||||||| |||||||||| |||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  14332797 ttctttcatttttttcataaccaatggccaataaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaaccatattccaaatt 14332896  T
Q  216 cttatgttttagttt 230  Q
    |||||||||||||||    
T  14332897 cttatgttttagttt 14332911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 4058709 - 4058866
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  4058709 ttattctcataaaattaaatgcaaatttcattcaattttctctctctttcattttttccataaccaataaccaatgaaaattgtttttacatcttcctat 4058808  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4058809 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 4058866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 22 - 230
Target Start/End: Original strand, 26916267 - 26916476
Alignment:
Q  22 caaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnngtt-attctcataaaattaaatgcaaattacattcaattttctctttctt 120  Q
    |||||||||||||||||||| ||||||||||| ||| |||          ||| ||||||||||||||||||||||||||||||||||||| | ||||||    
T  26916267 caaaatataagcaaaaaagataaacttttatccttttcaagattttttttgtttattctcataaaattaaatgcaaattacattcaattttatttttctt 26916366  T
Q  121 tcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttat 220  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26916367 tcattttttccataaccaatagccaataaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaaccatactccaaattcttat 26916466  T
Q  221 gttttagttt 230  Q
    ||||||||||    
T  26916467 gttttagttt 26916476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 18 - 230
Target Start/End: Complemental strand, 41414823 - 41414612
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctcttt 117  Q
    ||||||||||||||| |||||||||||||||||||||||| |||           ||||||| ||||||||||||||||||||||||||||||| ||| |    
T  41414823 gtcccaaaatataagtaaaaaagacaaacttttatctttttcaagatttttttgtttattcttataaaattaaatgcaaattacattcaattttttctct 41414724  T
Q  118 ctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattct 217  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  41414723 ctttcattttttc-ataatcaatagccaataaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactatactccatattct 41414625  T
Q  218 tatgttttagttt 230  Q
    |||||||||||||    
T  41414624 tatgttttagttt 41414612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 29203500 - 29203657
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  29203500 ttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 29203599  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||   ||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  29203600 aaaaaaatttgcaaagaaaacacaaaaaattatactccaaattcttatgttttagttt 29203657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 18 - 226
Target Start/End: Complemental strand, 56318285 - 56318075
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaa-annnnnnnnngtt-attctcataaaattaaatgcaaattacattcaattttctct 115  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |         ||| ||| ||||||||||||||| |||||||||||||||||||||    
T  56318285 gtcccaaaatataagcaaaaaagacatacttttatcttttccaatatttttttttgtttattatcataaaattaaatgtaaattacattcaattttctct 56318186  T
Q  116 ttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaatt 215  Q
     ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||| |||||| |||||    
T  56318185 ctctttcattttttccataaccaatagctaatgaaaattgtttttacatcttcctataaacctttttccaaagaaaacacaaaaaaccatactctaaatt 56318086  T
Q  216 cttatgtttta 226  Q
    |||||||||||    
T  56318085 cttatgtttta 56318075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 39078151 - 39078307
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||    
T  39078151 ttattctcataaaattaaatgcacattacattcaattttctttctctttcattttttcaataactaatagccaatgaaaattgtttttacatcttc-tat 39078249  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  39078250 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 39078307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 10069691 - 10069848
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||||||||||||||||||| |||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||    
T  10069691 ttattctcataaaattaaatgcaaataacattcaattttccttttctttcactttttccataaccaatagccaatgaaaattgtttttacatctttctat 10069790  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||    
T  10069791 aaaacttttttcgaagaaaatacaaaaaactatactacaaattcttatgttttagttt 10069848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 20716174 - 20716331
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  20716174 ttattctcataaaattaaatgcaaattacattcaattttctcactctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctat 20716273  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||||||||| |||| ||||  ||||| ||||||||||||||||||||||||||||||    
T  20716274 aaaactttttccaaacaaaagtcaaaagactatactccaaattcttatgttttagttt 20716331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 55580663 - 55580821
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttt-ttccataaccaatagccaatgaaaattgtttttacatcttctta 171  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||    
T  55580663 ttattctcataaaattaaatgcaaattacattaaaatttctctttctttcatttttttccataactaatagccaatgaaaattgtttttacatcttccta 55580762  T
Q  172 taaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    || |||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||    
T  55580763 tacaactttttccaaagaaaacaaaaaaaactatactccaaattcttatgtttcagttt 55580821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 95 - 230
Target Start/End: Original strand, 7654633 - 7654768
Alignment:
Q  95 aaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaaca 194  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||    
T  7654633 aaattacattcaattttctctttctttcattttttccataatcaatagccaatgaaaattgtttttatatcttcctataaaactttttccaaagaaaaca 7654732  T
Q  195 caaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||||||||||||||||| ||||||||||||||    
T  7654733 caaaaaactatactccaaatttttatgttttagttt 7654768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 95 - 230
Target Start/End: Complemental strand, 16604982 - 16604847
Alignment:
Q  95 aaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaaca 194  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  16604982 aaattacattcaattttctctctctttcattttttccataactaatagccaatgaaaattgttttaacatcttcctataaaacttttttcaaagaaaaca 16604883  T
Q  195 caaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||||||||||| ||||||||||||||||||||    
T  16604882 caaaaaactatactctaaattcttatgttttagttt 16604847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 79 - 230
Target Start/End: Original strand, 24940365 - 24940516
Alignment:
Q  79 tcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaact 178  Q
    ||||||||||||||| |||||||||| |||||||||| ||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  24940365 tcataaaattaaatggaaattacatttaattttctctctctttcattttctccataaccaataaccaacgaaaattgtttttacatcttcttataaaact 24940464  T
Q  179 tttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||| ||||||||| |||||||||||||||||||||||||| ||||||||||    
T  24940465 ttttccaaagaaaatacaaaaaactatactccaaattcttacgttttagttt 24940516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 18 - 230
Target Start/End: Complemental strand, 28669214 - 28669002
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnngtt-attctcataaaattaaatgcaaattacattcaattttctctt 116  Q
    ||||||||||||||||||||| |||||| ||||||||||| |||          ||| |||||||||||||||||| ||||||||||||||||||||||     
T  28669214 gtcccaaaatataagcaaaaaggacaaatttttatctttttcaagattttttttgtttattctcataaaattaaatacaaattacattcaattttctctc 28669115  T
Q  117 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 216  Q
    |||||||||||||| ||||| |||| |||||||||||||||||||||| ||| |||||||| ||||  ||||||||||||||||||||||||  ||||||    
T  28669114 tctttcattttttc-ataactaataaccaatgaaaattgtttttacattttcctataaaaccttttctaaagaaaacacaaaaaactatactttaaattc 28669016  T
Q  217 ttatgttttagttt 230  Q
    ||||||||||||||    
T  28669015 ttatgttttagttt 28669002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 17794699 - 17794542
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||| || ||||||||||| |||||||||||||||||||||||||||||||| |||    
T  17794699 ttattctcataaaattaaatgtaaattacattcaattttctctctcttccaatttttccataatcaatagccaatgaaaattgtttttacatcttcctat 17794600  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||| || ||||||||||||| |||||||||||||| ||||||||| | |||||||||    
T  17794599 aaaatttatttcaaagaaaacgcaaaaaactatacttcaaattctttttttttagttt 17794542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 5483436 - 5483279
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||| |||||||||||| ||||||||||||||||||| |||| |||||| |||||||||| ||||||||||||||||||||||||||||| |||    
T  5483436 ttattctcatgaaattaaatgcatattacattcaattttctctctcttccattttctccataaccagtagccaatgaaaattgtttttacatcttcctat 5483337  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
     |||||| ||| ||||||||||||||||| |||||| |||||| ||||||||||||||    
T  5483336 taaacttattttaaagaaaacacaaaaaattatacttcaaatttttatgttttagttt 5483279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 35310900 - 35310743
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||| ||||||||| ||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||   ||    
T  35310900 ttattctcatgaaattaaatacaaattacatttaattttctctctcttccattttttccataaccaatagccaatgaaaattgtttttacatctttccat 35310801  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
     |||||| ||  ||||||||||||||||||||| || |||||||||||||||||||||    
T  35310800 gaaacttattctaaagaaaacacaaaaaactatgctacaaattcttatgttttagttt 35310743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 42915523 - 42915681
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttt-ttccataaccaatagccaatgaaaattgtttttacatcttctta 171  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||| ||||| ||||||||||||| ||||||||||||||||||||||||||   |    
T  42915523 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttatttttttccataaccaattgccaatgaaaattgtttttacatctttcca 42915622  T
Q  172 taaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    | |||||| || |||||||||||||||||||||| || ||||||||||| |||||||||    
T  42915623 tgaaacttattccaaagaaaacacaaaaaactatgctacaaattcttatattttagttt 42915681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 73 - 226
Target Start/End: Complemental strand, 1585505 - 1585354
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||| |||||| ||||||| ||||||||||| ||||||||||| |||||||   ||    
T  1585505 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctccataatcaatagccaataaaaattgttttaacatctttccat 1585406  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 226  Q
     |||||| |||||||||||||||  |||| ||||||||||| ||||||||||||    
T  1585405 gaaacttatttcaaagaaaacac--aaaattatactccaaaatcttatgtttta 1585354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 48793784 - 48793631
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||| ||||||||||||||||||||| ||||||||||  |||| ||||||| |||||||||| |||||||||||||||||||||||||||  ||    
T  48793784 ttattctcatgaaattaaatgcaaattacatttaattttctct--cttttatttttttcataaccaattgccaatgaaaattgtttttacatcttcccat 48793687  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
     |||||| || ||||||||||||  |||||||| || |||||||||||| ||||||||    
T  48793686 gaaacttattccaaagaaaacac--aaaactatgctacaaattcttatgctttagttt 48793631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 8683462 - 8683307
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||| ||||||||| ||||||||||| ||||||||||  |||| |||||||||||||||||| ||||||||||||| ||||||||| ||   ||    
T  8683462 ttattctcatgaaattaaatacaaattacatttaattttctct--cttttattttttccataaccaattgccaatgaaaattatttttacatatttccat 8683365  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
     |||||| || |||||||||||||||||||||| || |||||||||||| ||||||||    
T  8683364 gaaacttattccaaagaaaacacaaaaaactatgctacaaattcttatgctttagttt 8683307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 84 - 208
Target Start/End: Original strand, 5815474 - 5815598
Alignment:
Q  84 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttttt 183  Q
    ||||||||||  |||||||||||||||||||| |||| | |||||||||||| |||||| |||| |||||| |||||||||||||| ||||||||| |||    
T  5815474 aaattaaatgtcaattacattcaattttctctctcttcctttttttccataatcaatagtcaataaaaattatttttacatcttctcataaaacttattt 5815573  T
Q  184 caaagaaaacacaaaaaactatact 208  Q
    |||||||||||||||||||||||||    
T  5815574 caaagaaaacacaaaaaactatact 5815598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 73 - 167
Target Start/End: Original strand, 35529666 - 35529760
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctt 167  Q
    |||| |||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  35529666 ttatgctcataaaattaaatgcaaattactttcaattttatctctctttcattttttccataaccaatacccaatgaaaattgtttttacatctt 35529760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 205
Target Start/End: Complemental strand, 8178387 - 8178265
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| | |||||||||| |||| ||||||||||| || |||||||||| |||||  |||||||||||||||||||||||||||||| ||    
T  8178387 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataaccaataaccaatacaaattgtttttacatcttcttataaaacttatt 8178288  T
Q  183 tcaaagaaaacacaaaaaactat 205  Q
    ||||||| ||||||  |||||||    
T  8178287 tcaaagataacacatgaaactat 8178265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 73 - 162
Target Start/End: Complemental strand, 52535743 - 52535654
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttac 162  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||| ||||||||||||||||||||||| |||||||    
T  52535743 ttattctcataaaattaaatgcaaattatattcaattttctctctctttcactttttctataaccaatagccaatgaaaattatttttac 52535654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 230
Target Start/End: Original strand, 32203226 - 32203364
Alignment:
Q  85 aattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttc 184  Q
    ||||||||| || |||||||||||||||||| | ||||||||||| |||||||||       ||||||||||||||| ||||||  ||||||||| ||||    
T  32203226 aattaaatgtaatttacattcaattttctctatgtttcatttttttcataaccaa-------tgaaaattgtttttatatcttcccataaaacttatttc 32203318  T
Q  185 aaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||||||  |||||||||||||||  ||||||||||||||||||||    
T  32203319 aaagaaacaacaaaaaactatactttaaattcttatgttttagttt 32203364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 83 - 200
Target Start/End: Complemental strand, 46070668 - 46070553
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| | |||||||||| ||||  |||||||||| || |||||||| | |||||||||||||||||||||||||| |||||||||| ||    
T  46070668 aaaattaaatgcaaagtgcattcaatttactct--ctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaacttatt 46070571  T
Q  183 tcaaagaaaacacaaaaa 200  Q
    ||||||| ||||||||||    
T  46070570 tcaaagacaacacaaaaa 46070553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 16473828 - 16473899
Alignment:
Q  159 ttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  16473828 ttacatcttcctataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatattttagttt 16473899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 83 - 206
Target Start/End: Complemental strand, 47516339 - 47516216
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    |||||||||| |||| | ||||  |||| |||| ||||||||||| || |||||||| | |||||||||||||||||||| ||||| |||||||||| ||    
T  47516339 aaaattaaatacaaagtgcatttgatttgctctctctttcattttctcaataaccaacaaccaatgaaaattgtttttacttcttcctataaaacttatt 47516240  T
Q  183 tcaaagaaaacacaaaaaactata 206  Q
    ||||||| ||||||||||||||||    
T  47516239 tcaaagataacacaaaaaactata 47516216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 205
Target Start/End: Complemental strand, 5841927 - 5841805
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    |||||| |||||||| | || ||||||| |||| |||||||||||||| |||||||||| |||||||||||| ||||||||||||| ||||||| || ||    
T  5841927 aaaattcaatgcaaagtgcaatcaatttgctctctctttcattttttcaataaccaataaccaatgaaaattatttttacatcttcctataaaatttatt 5841828  T
Q  183 tcaaagaaaacacaaaaaactat 205  Q
    |||| || ||||||| |||||||    
T  5841827 tcaaggataacacaagaaactat 5841805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 84 - 230
Target Start/End: Original strand, 19351851 - 19352003
Alignment:
Q  84 aaattaaatgcaaattacattcaatttt-ctctttctttcattttttccataaccaatagccaatgaaaattgttttt-acatcttcttataaaactttt 181  Q
    |||||||||||||||||||||||||||| |||| | || |||| ||| |||||| ||||||||||||||||||||||| ||||||||  || |||||| |    
T  19351851 aaattaaatgcaaattacattcaatttttctctctattccattgttttcataactaatagccaatgaaaattgtttttaacatcttcccatgaaacttat 19351950  T
Q  182 ttcaaagaaaacac---aaaaaactatactccaa-attcttatgttttagttt 230  Q
    ||||| ||||||||   |||||||||||||||||  || ||||||||||||||    
T  19351951 ttcaatgaaaacacacaaaaaaactatactccaatttttttatgttttagttt 19352003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 73 - 215
Target Start/End: Complemental strand, 32323419 - 32323278
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||| |||| |||||||||| ||||||| ||||||||||||| |||| |||||| || |||| |||  | |||||||||||||||||||||||||  ||    
T  32323419 ttattatcatgaaattaaatgtaaattac-ttcaattttctctctcttccattttctcaataatcaagcgtcaatgaaaattgtttttacatcttcccat 32323321  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaatt 215  Q
    ||| ||| ||| |||||||||||||||||| ||||| ||||||    
T  32323320 aaatcttattttaaagaaaacacaaaaaacaatacttcaaatt 32323278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 50080609 - 50080457
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||| ||| ||||||||||||||||||||||||||||| || |||| |||||| ||||||| ||||||||||| ||||||| ||||| || |||  ||    
T  50080609 ttattcgcatgaaattaaatgcaaattacattcaattttcactctcttccattttatccataatcaatagccaataaaaattggttttatattttcccat 50080510  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
         || |   ||||||||||||||||| ||||||| ||||||||||||||||||||    
T  50080509 -----ttatacaaaagaaaacacaaaaaattatactcaaaattcttatgttttagttt 50080457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 230
Target Start/End: Complemental strand, 5064803 - 5064656
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| | |||||||||| |||| | ||||||||| || |||| |||   | |||||||||||||||||||||||| | |||||||| ||    
T  5064803 aaaattaaatgcaaagtgcattcaatttactctctttttcattttctctataatcaactactaatgaaaattgtttttacatcttcctttaaaacttatt 5064704  T
Q  183 tcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||| ||||||||||| |||  | ||||||  |||||||||||||    
T  5064703 tcaaagataacacaaaaaattatgttacaaattactatgttttagttt 5064656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 73 - 167
Target Start/End: Complemental strand, 25297380 - 25297286
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctt 167  Q
    |||||||||| |||||||||| ||||||||||||||||||  | ||||  ||||| ||||||| |||||||||||||||||||||||||||||||    
T  25297380 ttattctcatgaaattaaatgtaaattacattcaattttccatctcttctattttctccataatcaatagccaatgaaaattgtttttacatctt 25297286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 137 - 230
Target Start/End: Complemental strand, 21722776 - 21722683
Alignment:
Q  137 caatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||||| ||||||||||| ||||||||||||| |||||||||| || ||||||||||| |||| ||||||||  ||||||||||||||||||||    
T  21722776 caatagtcaatgaaaattatttttacatcttcctataaaacttattacaaagaaaacataaaacactatacttaaaattcttatgttttagttt 21722683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 74 - 209
Target Start/End: Original strand, 50145731 - 50145865
Alignment:
Q  74 tattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttata 173  Q
    |||| |||| ||||||||||  ||||||||| ||||||| || |||| |||||| ||||| | |||||||||||||||||||| |||||||||||  |||    
T  50145731 tattttcatgaaattaaatgttaattacatttaattttccctctcttccattttctccattatcaatagccaatgaaaattgtgtttacatcttcccata 50145830  T
Q  174 aaacttttttcaaagaaaacacaaaaaactatactc 209  Q
    |||||| || ||||| ||||||||| || |||||||    
T  50145831 aaacttattccaaag-aaacacaaacaattatactc 50145865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 14583723 - 14583880
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||| |||||||||||||||||||||||||| || || |||| |||||| |   ||| | |||||||||||||| |||||||||||||||  ||    
T  14583723 ttattctcatgaaattaaatgcaaattacattcaattatcactctcttccattttctttttaatccatagccaatgaaaa-tgtttttacatcttcccat 14583821  T
Q  173 aaaacttttttcaaag-aaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
     |||||| ||| |||| |||||||||| |||||||    |||||||||| |||||||||    
T  14583822 gaaacttattttaaagaaaaacacaaataactatatattaaattcttatattttagttt 14583880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 76 - 205
Target Start/End: Complemental strand, 17186940 - 17186822
Alignment:
Q  76 ttctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaa 175  Q
    ||||||||||||||||||||||||| |||||||         |||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||    
T  17186940 ttctcataaaattaaatgcaaatta-attcaat---------ctttcattttttccataaccaatagccaatgaaacttatttttacatcttcctataaa 17186851  T
Q  176 acttttttcaaagaaaacacaaaaaactat 205  Q
    |    |||||||||||| ||||||||||||    
T  17186850 a-aaatttcaaagaaaatacaaaaaactat 17186822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 73 - 219
Target Start/End: Original strand, 31280193 - 31280329
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||| || ||||||||| |||| | |||||||||||||||  ||| ||||| | ||||||| ||||||||||||||||| |||||||||      ||    
T  31280193 ttattctaatgaaattaaatacaaactgcattcaattttctct--cttccatttct-ccataac-aatagccaatgaaaattatttttacat------at 31280282  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattctta 219  Q
    ||||||| || |||||||||||||||||||||||||| |||||||||    
T  31280283 aaaacttattccaaagaaaacacaaaaaactatactctaaattctta 31280329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 12002793 - 12002634
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||| |||| ||||||||||||||||||||||||| |      |||| || ||| |||||||||||| |||||| |||||||||||||||||||   ||    
T  12002793 ttattttcatgaaattaaatgcaaattacattcaatatc-----tcttccagtttctccataaccaatggccaataaaaattgtttttacatctttccat 12002699  T
Q  173 aaaacttttttcaaagaaaa-------cacaaaaaactatactccaaattcttatgttttagttt 230  Q
     |||||  || |||| ||||       ||||||||||||||||||||||||||||||||||||||    
T  12002698 gaaactaattccaaaaaaaaaaaaaaacacaaaaaactatactccaaattcttatgttttagttt 12002634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 123 - 225
Target Start/End: Complemental strand, 32280111 - 32280009
Alignment:
Q  123 attttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgt 222  Q
    ||||| ||||||| ||||||||||| |||||||||||||||| |  | || |||| | ||  ||||||||||||||||| ||||||||||||||||||||    
T  32280111 attttctccataatcaatagccaattaaaattgtttttacatatcttcatcaaacctattctaaagaaaacacaaaaaattatactccaaattcttatgt 32280012  T
Q  223 ttt 225  Q
    |||    
T  32280011 ttt 32280009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 88 - 230
Target Start/End: Complemental strand, 17799277 - 17799135
Alignment:
Q  88 taaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaa 187  Q
    |||||||||||| |||| |||||  |||  || ||||||| |||||||| |||| ||||||||||||||||||||||||||  ||||||||  || |||     
T  17799277 taaatgcaaattgcatttaatttgttctccctctcattttctccataacaaataaccaatgaaaattgtttttacatcttcccataaaactaattccaag 17799178  T
Q  188 gaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
     | ||||| | ||| ||||||||||||| | || |||||||||    
T  17799177 aagaacaccagaaattatactccaaattatcatattttagttt 17799135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 83 - 177
Target Start/End: Complemental strand, 23978263 - 23978169
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaac 177  Q
    ||||||||||||||| | |||||||||| |||| | ||||||||| || |||| |||   |||||||||||||||||||||||||| ||||||||    
T  23978263 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaac 23978169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 83 - 205
Target Start/End: Original strand, 37911888 - 37912010
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| | |||| ||||| |||| | ||| ||||| || |||| |||   |||||||||||||||||||||| ||  |||||||||| ||    
T  37911888 aaaattaaatgcaaagtgcattgaatttgctctcttttttattttctctataatcaactaccaatgaaaattgtttttacatatttctataaaacttatt 37911987  T
Q  183 tcaaagaaaacacaaaaaactat 205  Q
    | ||||| |||||||||||||||    
T  37911988 ttaaagataacacaaaaaactat 37912010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 83 - 201
Target Start/End: Original strand, 49080261 - 49080379
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| | ||||||||||  ||| | |||||||||  |  ||| |||   |||||||||||||||||||||||||| |||||||||| ||    
T  49080261 aaaattaaatgcaaagtgcattcaatttgatctctttttcattttccctgtaatcaactaccaatgaaaattgtttttacatcttcctataaaacttatt 49080360  T
Q  183 tcaaagaaaacacaaaaaa 201  Q
    ||||||| || ||||||||    
T  49080361 tcaaagataagacaaaaaa 49080379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 205
Target Start/End: Original strand, 29511490 - 29511551
Alignment:
Q  144 caatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactat 205  Q
    ||||||||||||||||||||||||| |||||||||| ||| ||||| |||||||||||||||    
T  29511490 caatgaaaattgtttttacatcttcctataaaacttattttaaagataacacaaaaaactat 29511551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 83 - 203
Target Start/End: Original strand, 32410332 - 32410452
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaa-tagccaatgaaaattgtttttacatcttcttataaaactttt 181  Q
    ||||||||||||||| |  ||||||||| |||| | ||| ||||| || ||||  || |||| |||||||||| ||||||||||||| |||||||||| |    
T  32410332 aaaattaaatgcaaagtgtattcaatttgctctcttttttattttctctataattaactagc-aatgaaaattatttttacatcttcctataaaacttat 32410430  T
Q  182 ttcaaagaaaacacaaaaaact 203  Q
    |||||||| |||||||||||||    
T  32410431 ttcaaagataacacaaaaaact 32410452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 83 - 230
Target Start/End: Complemental strand, 8013237 - 8013090
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    |||||||||||||| || |||||| | |  ||| ||||||||||| || || || |||| ||||| |||||||||||||||||||  ||| |||||| ||    
T  8013237 aaaattaaatgcaatttgcattcattatgttctctctttcattttctctatgactaataaccaataaaaattgtttttacatctttctatgaaacttatt 8013138  T
Q  183 tcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||| || ||||||| |||||||  | |||| |  |||||||||||||    
T  8013137 tcaaggataacacaagaaactatgttacaaactactatgttttagttt 8013090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 83 - 205
Target Start/End: Complemental strand, 28318565 - 28318445
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||| ||| | |||||||||| ||   | ||||||||| || |||| |||   |||||||||||||||||||||||||| ||||||  || ||    
T  28318565 aaaattaaatgtaaaatgcattcaatttactagctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaa--ttatt 28318468  T
Q  183 tcaaagaaaacacaaaaaactat 205  Q
    ||||||| |||||||||||||||    
T  28318467 tcaaagataacacaaaaaactat 28318445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 201
Target Start/End: Complemental strand, 28142769 - 28142652
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    |||||||||||||||   |||| ||||| |||| | ||||||||| || |||| |||   ||||||||||||||||||||||| || |||||||||| ||    
T  28142769 aaaattaaatgcaaaag-catttaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcctcctataaaacttatt 28142671  T
Q  183 tcaaagaaaacacaaaaaa 201  Q
    | ||||| |||||||||||    
T  28142670 ttaaagataacacaaaaaa 28142652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 25268523 - 25268626
Alignment:
Q  123 attttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgt 222  Q
    ||||| ||||||||||||| |||||||||||| ||||||  ||||||| | |||||| ||||||  | ||||||||||  ||||| ||||||| |||| |    
T  25268523 attttctccataaccaataaccaatgaaaattatttttatttcttcttgtgaaacttatttcaagtagaacacaaaaagatataccccaaattattatat 25268622  T
Q  223 ttta 226  Q
    ||||    
T  25268623 ttta 25268626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 167
Target Start/End: Original strand, 40553774 - 40553857
Alignment:
Q  84 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctt 167  Q
    |||||||||||||||| |||||| ||| ||||   ||||| ||| |||||||| |||| ||||||||| |||||||||||||||    
T  40553774 aaattaaatgcaaattgcattcattttactctccttttcactttctccataactaataaccaatgaaacttgtttttacatctt 40553857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 7654570 - 7654608
Alignment:
Q  23 aaaatataagcaaaaaagacaaacttttatcttttccaa 61  Q
    |||||||||||||||||||||||||||||||||||||||    
T  7654570 aaaatataagcaaaaaagacaaacttttatcttttccaa 7654608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 82 - 207
Target Start/End: Complemental strand, 30012074 - 30011951
Alignment:
Q  82 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 181  Q
    |||||||||||||||||| ||||||||||  ||||| ||  ||||| |||||||  | || ||||||| |||||||||||||||||   || |||||| |    
T  30012074 taaaattaaatgcaaattgcattcaatttgttctttttt--attttctccataataattaaccaatgataattgtttttacatctttccatgaaacttat 30011977  T
Q  182 ttcaaagaaaacacaaaaaactatac 207  Q
    | |||| | ||||||||||| |||||    
T  30011976 tccaaaaataacacaaaaaattatac 30011951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 29203414 - 29203451
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatctt 55  Q
    ||||||||||||||||||||||||||||||||||||||    
T  29203414 gtcccaaaatataagcaaaaaagacaaacttttatctt 29203451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 83 - 205
Target Start/End: Original strand, 53848471 - 53848586
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    |||| |||||||||| | |||||||||| || | |||||||||||||| |||||||||        |||||||||||||| ||||| ||||||| || ||    
T  53848471 aaaaataaatgcaaagtgcattcaatttgctttctctttcattttttcaataaccaatt-------aaaattgtttttacgtcttcctataaaaattatt 53848563  T
Q  183 tcaaagaaaacacaaaaaactat 205  Q
    |||| || ||||||| |||||||    
T  53848564 tcaaggataacacaagaaactat 53848586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 17187027 - 17186992
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatc 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  17187027 gtcccaaaatataagcaaaaaagacaaacttttatc 17186992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 16605080 - 16605046
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttat 52  Q
    |||||||||||||||||||||||||||||||||||    
T  16605080 gtcccaaaatataagcaaaaaagacaaacttttat 16605046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 35529578 - 35529612
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttat 52  Q
    |||||||||||||||||||||||||||||||||||    
T  35529578 gtcccaaaatataagcaaaaaagacaaacttttat 35529612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 42915436 - 42915470
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttat 52  Q
    |||||||||||||||||||||||||||||||||||    
T  42915436 gtcccaaaatataagcaaaaaagacaaacttttat 42915470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 114
Target Start/End: Complemental strand, 32280145 - 32280104
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctc 114  Q
    |||||||||| ||| |||||||||||||||||||||||||||    
T  32280145 ttattctcatgaaactaaatgcaaattacattcaattttctc 32280104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 37872657 - 37872757
Alignment:
Q  123 attttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgt 222  Q
    ||||| |||||||| ||||  ||||||||||| ||||||   |||||||| |||||| ||||||| | ||||||||||  ||||| ||||||| | ||||    
T  37872657 attttctccataactaataatcaatgaaaattattttta---cttcttatgaaacttatttcaaatagaacacaaaaagatataccccaaattatcatgt 37872753  T
Q  223 ttta 226  Q
    ||||    
T  37872754 ttta 37872757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 55580574 - 55580607
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaactttta 51  Q
    ||||||||||||||||||||||||||||||||||    
T  55580574 gtcccaaaatataagcaaaaaagacaaactttta 55580607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 206
Target Start/End: Complemental strand, 5222415 - 5222291
Alignment:
Q  82 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 181  Q
    |||||||||||||||||| |||| |||||  |||   ||| |||||| | |||| || || ||||| | |||||||||||||| || |||| |||||| |    
T  5222415 taaaattaaatgcaaattgcattgaatttgttctcctttttatttttcctataatcattatccaataagaattgtttttacatttttttatgaaacttat 5222316  T
Q  182 ttcaaagaaaacacaaaaaactata 206  Q
    |||||  | ||||||||||| ||||    
T  5222315 ttcaagaagaacacaaaaaattata 5222291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 4058621 - 4058656
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatc 53  Q
    |||| |||||||||||||||||||||||||||||||    
T  4058621 gtcctaaaatataagcaaaaaagacaaacttttatc 4058656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 230
Target Start/End: Original strand, 7438760 - 7438799
Alignment:
Q  191 aacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||| ||||||||||||||||||| ||||||||||||||    
T  7438760 aacaccaaaaactatactccaaattattatgttttagttt 7438799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 10069603 - 10069638
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatc 53  Q
    |||||||||||||||||||||||| |||||||||||    
T  10069603 gtcccaaaatataagcaaaaaagaaaaacttttatc 10069638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 39078064 - 39078099
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatc 53  Q
    ||||||||||||||| ||||||||||||||||||||    
T  39078064 gtcccaaaatataagtaaaaaagacaaacttttatc 39078099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 40411104 - 40411199
Alignment:
Q  82 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaac 177  Q
    |||||||||||| ||| | ||||||||||  ||| | ||||||||| ||  ||| |||   ||||| |||||||||||||||||||| ||||||||    
T  40411104 taaaattaaatgtaaactgcattcaatttgatctctttttcattttctctgtaatcaactaccaataaaaattgtttttacatcttcctataaaac 40411199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 52
Target Start/End: Complemental strand, 29180606 - 29180576
Alignment:
Q  22 caaaatataagcaaaaaagacaaacttttat 52  Q
    |||||||||||||||||||||||||||||||    
T  29180606 caaaatataagcaaaaaagacaaacttttat 29180576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 230
Target Start/End: Complemental strand, 31532540 - 31532454
Alignment:
Q  144 caatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||| |||||||||||| |||||| | || ||| |  ||| || ||||||| |||||||||||||| ||||| | ||||||||||||    
T  31532540 caataaaaattgttttttcatcttttcatgaaattaattttaatgaaaacataaaaaactatactctaaattgtaatgttttagttt 31532454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 52
Target Start/End: Complemental strand, 32012521 - 32012491
Alignment:
Q  22 caaaatataagcaaaaaagacaaacttttat 52  Q
    |||||||||||||||||||||||||||||||    
T  32012521 caaaatataagcaaaaaagacaaacttttat 32012491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 48793871 - 48793837
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttat 52  Q
    ||||||||||||||||| |||||||||||||||||    
T  48793871 gtcccaaaatataagcataaaagacaaacttttat 48793837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 207
Target Start/End: Complemental strand, 10591625 - 10591500
Alignment:
Q  82 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 181  Q
    |||||||||||||||||| |||||||||   |||   ||| |||||||||||||    || ||||||| |||| ||||||||||||   || |||||| |    
T  10591625 taaaattaaatgcaaattgcattcaattggttctcctttttattttttccataatttttaaccaatgagaattatttttacatctttccatgaaacttat 10591526  T
Q  182 ttcaaagaaaacacaaaaaactatac 207  Q
    | ||| || ||||||||||| |||||    
T  10591525 tccaaggagaacacaaaaaattatac 10591500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 114
Target Start/End: Complemental strand, 21722824 - 21722783
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctc 114  Q
    |||||||||| ||||||||| ||||||||||| |||||||||    
T  21722824 ttattctcatgaaattaaatacaaattacatttaattttctc 21722783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 52
Target Start/End: Complemental strand, 35310983 - 35310954
Alignment:
Q  23 aaaatataagcaaaaaagacaaacttttat 52  Q
    ||||||||||||||||||||||||||||||    
T  35310983 aaaatataagcaaaaaagacaaacttttat 35310954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 52
Target Start/End: Complemental strand, 8683543 - 8683515
Alignment:
Q  24 aaatataagcaaaaaagacaaacttttat 52  Q
    |||||||||||||||||||||||||||||    
T  8683543 aaatataagcaaaaaagacaaacttttat 8683515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 230
Target Start/End: Complemental strand, 38140821 - 38140713
Alignment:
Q  122 cattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatg 221  Q
    ||||||| ||||||| ||||  |||||||||||  ||||||| ||||| || |||||  ||| ||  | ||||||| ||||||||||| ||||| | |||    
T  38140821 catttttgccataacaaataatcaatgaaaatttattttacaccttctgatgaaactaatttaaagtagaacacaagaaactatactcaaaattatcatg 38140722  T
Q  222 ttttagttt 230  Q
     ||||||||    
T  38140721 ctttagttt 38140713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 159; Significance: 1e-84; HSPs: 73)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 18 - 230
Target Start/End: Complemental strand, 7022625 - 7022412
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaa-annnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctt 116  Q
    |||||||||||||||||||||||||||||||||||||||| ||| |         |||||||||||||||||||||||||||||||||||||||||||||    
T  7022625 gtcccaaaatataagcaaaaaagacaaacttttatctttttcaagatttttttttgttattctcataaaattaaatgcaaattacattcaattttctctt 7022526  T
Q  117 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 216  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  7022525 tctttcattttttccataaccaatagccaatgaaaattatttttatatcttcctataaaacttttttcaaagaaaacacaaaaaactatactccaaattt 7022426  T
Q  217 ttatgttttagttt 230  Q
    ||||||||||||||    
T  7022425 ttatgttttagttt 7022412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 18 - 230
Target Start/End: Original strand, 7858466 - 7858679
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnngtt-attctcataaaattaaatgcaaattacattcaattttctctt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||          ||| ||||||||||||||||||||||||||| |||||||||||||     
T  7858466 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaagattttttttgtttattctcataaaattaaatgcaaattactttcaattttctctc 7858565  T
Q  117 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 216  Q
    ||||||||||||||||||| |||| | ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  7858566 tctttcattttttccataatcaatggtcaatgaaaattgtttttacatcttcctataaaacttttttcaaataaaacacaaaaaactatactccaaattc 7858665  T
Q  217 ttatgttttagttt 230  Q
    ||||||||||||||    
T  7858666 ttatgttttagttt 7858679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 34890340 - 34890183
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  34890340 ttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 34890241  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  34890240 aaaactttttccaaagaaaacacaaaaaattatactccaaattcttatgttttagttt 34890183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 36190766 - 36190923
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||    
T  36190766 ttattctcataaaattaaatgcaaattacattcaattttctctctcttttattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 36190865  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  36190866 aaaacttttttcaaagaaaacacaaaaaactatactctaaattcttatgttttagttt 36190923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 72 - 230
Target Start/End: Original strand, 26483525 - 26483683
Alignment:
Q  72 gttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttctta 171  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||    
T  26483525 gttattctcgtaaaattaaatgtaaattacattcaattttctctttctttcattttttccataatcaatagccaatgaaaattgtttttacatctcccta 26483624  T
Q  172 taaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  26483625 taaaacttttttcaaagaaaacacaaaaaactatacttcaaattcttatgttttagttt 26483683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 43216513 - 43216356
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||||||||||||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||  |||||||||||||||||||||||| |||    
T  43216513 ttattctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagtgaatgaaaattgtttttacatcttcctat 43216414  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43216413 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 43216356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 73 - 219
Target Start/End: Original strand, 31734109 - 31734255
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||| |||    
T  31734109 ttattctcatcaaattaaatgcaaattacattcaattttctctctctttcattttttccatatccaatagccaatgaaaattgtttttatatcttcctat 31734208  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattctta 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  31734209 aaaacttttttcaaagaaaacacaaaaaactatactccaaattctta 31734255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 15958079 - 15957920
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttct--ttcattttttccataaccaatagccaatgaaaattgtttttacatcttctt 170  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||| |||||||||||||||||| | ||| |    
T  15958079 ttattctcataaaattaaatgcaaattacattcaattttctctctctctttcattttttccataaccaatagcaaatgaaaattgtttttacttattcct 15957980  T
Q  171 ataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||    
T  15957979 ataaaacttttttcaaagaaaacacaataaactatactccaatttcttatattttagttt 15957920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 73 - 225
Target Start/End: Original strand, 28348605 - 28348756
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||| ||| |||    
T  28348605 ttattctcataaaattaaatgcaaattacattcaattttctctctctttcatttt-tccataaccaatagccaatggaaattgtttttacatattcctat 28348703  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttt 225  Q
    |||||||||| ||||||||| |||||| |||||||||||||||||||||||||    
T  28348704 aaaactttttccaaagaaaatacaaaatactatactccaaattcttatgtttt 28348756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 18 - 230
Target Start/End: Complemental strand, 41086609 - 41086395
Alignment:
Q  18 gtcccaaaatataagcaaaaaa-gacaaacttttatcttttccaaannnnnnnnngtt-attctcataaaattaaatgcaaattacattcaattttctct 115  Q
    |||||||||||||||||||||| |||||||||||||||||| |||          ||| |||||||||||||||||||||||||||||| ||||||||||    
T  41086609 gtcccaaaatataagcaaaaaaagacaaacttttatctttttcaagattttttttgtttattctcataaaattaaatgcaaattacattgaattttctct 41086510  T
Q  116 ttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaatt 215  Q
     | ||| ||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| | ||||||    
T  41086509 ctgttttattttttccattaccaatagccaatgaaaattgtttttacatctttatataaaacttttttcaaagaaaacacaaaaaactataattcaaatt 41086410  T
Q  216 cttatgttttagttt 230  Q
     ||||  ||||||||    
T  41086409 tttattatttagttt 41086395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 73 - 226
Target Start/End: Complemental strand, 8107783 - 8107630
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||| | || |    
T  8107783 ttattctcataaaattaaatgcaaattacattcaattttctctctctttcatttat-ccataaccaatagccaatgaaaattgtttttacatcatattgt 8107685  T
Q  173 aaaacttttttcaaagaaaacac-aaaaaactatactccaaattcttatgtttta 226  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||| |||||    
T  8107684 aaaacttttttcaaagaaaatacaaaaaaactatactccaaattcttatatttta 8107630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 24892832 - 24892992
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgttt---ttacatcttct 169  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||   ||| ||| ||     
T  24892832 ttattctcataaaattaaatgcaaattacattcaattttctatctctttcattttttccataaccaatagccaatgaaaattgtttttattatatcctcc 24892931  T
Q  170 tataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||||||| |||| |||||||||||||||||||||||||| |||||||||||||| |||||    
T  24892932 tataaaacgttttccaaagaaaacacaaaaaactatactctaaattcttatgtttaagttt 24892992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 73 - 214
Target Start/End: Original strand, 8711870 - 8712011
Alignment:
Q  73 ttattctcataaaa-ttaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttctta 171  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  8711870 ttattctcataaaaattaaatgcaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattatttttacatcttccta 8711969  T
Q  172 taaaacttttttcaaagaaaacacaaaaaactatactccaaat 214  Q
    ||||||||||| |||| ||||||||||||||||||||||||||    
T  8711970 taaaactttttccaaa-aaaacacaaaaaactatactccaaat 8712011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 73 - 219
Target Start/End: Original strand, 13143758 - 13143904
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||| |||||| |||||||||||||||||||||||||||| |||    
T  13143758 ttattctcataaaattaaatgcaaattacattcaattttttctctctttcatttttcccacaaccaacagccaatgaaaattgtttttacatcttcctat 13143857  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattctta 219  Q
     ||||||||||||| |||||||||||||| |||||| ||||||||||    
T  13143858 gaaacttttttcaacgaaaacacaaaaaattatacttcaaattctta 13143904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 73 - 226
Target Start/End: Complemental strand, 34158457 - 34158303
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||  |||||| |||||||||||| ||||||||||||||||||||||||| |||    
T  34158457 ttattatcataaaattaaatgcaaattacattcaattttctctctcttttgtttttttcataaccaatagtcaatgaaaattgtttttacatcttcctat 34158358  T
Q  173 aaaactt-ttttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 226  Q
    ||||||| |||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  34158357 aaaacttttttttaaagaaaacacaacaaactatactccagattcttatgtttta 34158303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 73 - 226
Target Start/End: Complemental strand, 35456190 - 35456038
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||||||||||||| |||||||||||| |||||||| ||||| |||||||||||||  ||||||||||||||||||||||||||||||  |||    
T  35456190 ttattctcataaaattaaatgtaaattacattcatttttctctctcttttattttttccataattaatagccaatgaaaattgtttttacatctttctat 35456091  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 226  Q
    |||||| |||||||| |||||| ||||||||||||| |||||||||||||||||    
T  35456090 aaaact-ttttcaaaaaaaacataaaaaactatacttcaaattcttatgtttta 35456038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 87 - 230
Target Start/End: Complemental strand, 30575987 - 30575843
Alignment:
Q  87 ttaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat-aaaacttttttca 185  Q
    ||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| | | ||||||||||| |    
T  30575987 ttaaatgcaaattacttttaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacattttcctgtaaaaacttttttta 30575888  T
Q  186 aagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||    
T  30575887 aagaaaacacaaaaaactttactccaaatttttatgttttagttt 30575843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 95 - 230
Target Start/End: Original strand, 35525603 - 35525736
Alignment:
Q  95 aaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaaca 194  Q
    |||||||||| |||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  35525603 aaattacattaaattttctctctcttttattttttccataaccaatagtcaatgaaaattgtttttacatcttcctgtaaaacttttttcaaagaaaaca 35525702  T
Q  195 caaaaaactatactccaaattcttatgttttagttt 230  Q
    |  |||||||||||| ||||||||||||||||||||    
T  35525703 c--aaaactatactctaaattcttatgttttagttt 35525736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 8709950 - 8709795
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||  ||||| ||||||||  |||| ||||||||| ||||||||| |||||  ||    
T  8709950 ttattctcataaaattaaatgcaaattacattcaattttctct--cttctattttctccataacatatagtcaatgaaaaatgtttttacttcttcccat 8709853  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
     | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8709852 gagacttatttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 8709795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 111 - 230
Target Start/End: Complemental strand, 13144073 - 13143954
Alignment:
Q  111 tctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttttt-caaagaaaacacaaaaaactatactc 209  Q
    ||||| |||||||||||| |||||||||||| | |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  13144073 tctctctctttcattttt-ccataaccaataactaatgaaaattgtttttacatcttcctataaaactttttttcaaagaaaacacaaaaaactatactc 13143975  T
Q  210 caaattcttatgttttagttt 230  Q
    |||||||||||||||||||||    
T  13143974 caaattcttatgttttagttt 13143954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 29920434 - 29920277
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||| ||||||||| | ||||||||||||||||| || ||||  ||||| ||||||| ||||||||||||||||||||||||||||||||  ||    
T  29920434 ttattctcatgaaattaaataccaattacattcaattttccctctcttctattttgtccataatcaatagccaatgaaaattgtttttacatcttcccat 29920335  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
     |||||| || |||||| ||||||||||| | |||| |||||||||||||||||||||    
T  29920334 gaaacttattccaaagataacacaaaaaattgtacttcaaattcttatgttttagttt 29920277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 73 - 170
Target Start/End: Original strand, 7499720 - 7499818
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttca-ttttttccataaccaatagccaatgaaaattgtttttacatcttctt 170  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  7499720 ttattctcataaaattaaatgtaaattacattcaattttctctctctttcatttttttccataaccaatagccaatgaaaattgtttttacatcttctt 7499818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 16879558 - 16879401
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||| || ||||||||| |||| ||||||||||||||||| |||||||||||  |||||| |||||| |||| |||||||||||||||| |||  ||    
T  16879558 ttattcttatgaaattaaatacaaactacattcaattttctctctctttcattttcaccataatcaatagtcaataaaaattgtttttacatattcccat 16879459  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
     ||| || ||||||||||||||||||||| |||||| ||||||||||| |||||||||    
T  16879458 gaaatttatttcaaagaaaacacaaaaaattatacttcaaattcttatattttagttt 16879401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 15824797 - 15824646
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||| |||||||||| |||||||||| |||||||||| |||| |||||||| ||||||||||||||      |||||||||||||||||   ||    
T  15824797 ttattctcatgaaattaaatgaaaattacattaaattttctctctcttccatttttttcataaccaatagcc------aattgtttttacatctttccat 15824704  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
     |||||| ||  |||||||||||||||||||||||| |||||||||||||||||||||    
T  15824703 gaaacttattctaaagaaaacacaaaaaactatacttcaaattcttatgttttagttt 15824646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 73 - 220
Target Start/End: Complemental strand, 4047060 - 4046912
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||| ||||||||||||| ||||||||| ||   ||    
T  4047060 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttattttttccataaccaattgccaatgaaaattatttttacatatttccat 4046961  T
Q  173 aaaacttttttcaaagaaaacaca-aaaaactatactccaaattcttat 220  Q
     |||||| ||  |||||||||||| ||||||||| || |||||||||||    
T  4046960 gaaacttattataaagaaaacacacaaaaactatgctacaaattcttat 4046912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 78 - 168
Target Start/End: Complemental strand, 3642130 - 3642041
Alignment:
Q  78 ctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttc 168  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3642130 ctcataaaataaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaat-aaaattgtttttacatcttc 3642041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 205
Target Start/End: Original strand, 8673385 - 8673507
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| |||||||||||| |||| | ||||||||| || |||| |||   ||||||||||||||||||||||||||||||||||||| ||    
T  8673385 aaaattaaatgcaaagtacattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcttataaaacttatt 8673484  T
Q  183 tcaaagaaaacacaaaaaactat 205  Q
    ||||| | |||||||||||||||    
T  8673485 tcaaatataacacaaaaaactat 8673507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 183
Target Start/End: Original strand, 2052830 - 2052938
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||| ||||||||||||||||||||||||||||||||  |||  ||||| ||| || |||||||||||||||||||||||||||||||||  ||    
T  2052830 ttattctcatgaaattaaatgcaaattacattcaattttctct--cttctattttctccctagccaatagccaatgaaaattgtttttacatcttcccat 2052927  T
Q  173 aaaactttttt 183  Q
    |||||||||||    
T  2052928 aaaactttttt 2052938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 83 - 230
Target Start/End: Original strand, 17713227 - 17713374
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| | |||||||| | |||| |||| ||||||||| |||||||||| ||||||||||||||||||| |||||| |||||||||| ||    
T  17713227 aaaattaaatgcaaagtgcattcaatgtgctctctcttccattttttcaataaccaataaccaatgaaaattgtttttaaatcttcctataaaacttatt 17713326  T
Q  183 tcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||| || ||||||| |||||||  | |||| |  |||||||||||||    
T  17713327 tcaaggataacacaagaaactatgttgcaaaatactatgttttagttt 17713374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 110 - 226
Target Start/End: Complemental strand, 16358240 - 16358125
Alignment:
Q  110 ttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactc 209  Q
    |||||| ||||||||||||| ||||| |||||| |||||||||||| |||||||||||| ||| |||| |||||||||||||||| |||||||||||||     
T  16358240 ttctctctctttcatttttttcataatcaatagtcaatgaaaattgattttacatcttcctatgaaac-tttttcaaagaaaacaaaaaaaactatactt 16358142  T
Q  210 caaattcttatgtttta 226  Q
    |||||| |||| |||||    
T  16358141 caaatttttatatttta 16358125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 190
Target Start/End: Complemental strand, 26954548 - 26954441
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| | |||||| ||| || | ||||||||||| || |||||||| | |||||||||||||||||||||||||| |||||||||| ||    
T  26954548 aaaattaaatgcaaagtgcattcattttgctttctctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaacttatt 26954449  T
Q  183 tcaaagaa 190  Q
    ||||||||    
T  26954448 tcaaagaa 26954441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 230
Target Start/End: Complemental strand, 41362463 - 41362316
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| | |||| ||||| |||  | ||||||||| || |||| |||   |||||||||||||||||||||||||| |||||||||| ||    
T  41362463 aaaattaaatgcaaagtgcatttaatttgctcactttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatt 41362364  T
Q  183 tcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||| |||||||||||||||  | |||| |  |||||||||||||    
T  41362363 tcaaagataacacaaaaaactatgttacaaactactatgttttagttt 41362316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 85 - 230
Target Start/End: Original strand, 38072169 - 38072314
Alignment:
Q  85 aattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttc 184  Q
    |||||||| |||| | |||||||||| |||||| ||||||||| || |||| |||   |||||||||||||||||||||| || |||||||||||  |||    
T  38072169 aattaaatacaaagtgcattcaatttgctctttttttcattttctctataatcaactaccaatgaaaattgtttttacatttttttataaaacttaattc 38072268  T
Q  185 aaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||| |||||||||||||||  | |||| |  |||||||||||||    
T  38072269 aaagataacacaaaaaactatgttacaaactactatgttttagttt 38072314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 205
Target Start/End: Complemental strand, 2628320 - 2628198
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    |||||| |||||||| |  ||||||||| |||| ||||||||||| || |||| ||||| |||||||||||| ||||||||||||| |||||||||| ||    
T  2628320 aaaatttaatgcaaagtgaattcaatttgctctctctttcattttctcaataagcaataaccaatgaaaattatttttacatcttcctataaaacttatt 2628221  T
Q  183 tcaaagaaaacacaaaaaactat 205  Q
    | || || ||||||| |||||||    
T  2628220 ttaaggataacacaagaaactat 2628198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 201
Target Start/End: Complemental strand, 25195202 - 25195085
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| | |||||||||| |||| | ||||||||| || |||| |||   |||||||||||||||||||||||||| ||||||| || ||    
T  25195202 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaaccaccaatgaaaattgtttttacatcttcctataaaa-ttatt 25195104  T
Q  183 tcaaagaaaacacaaaaaa 201  Q
    ||||||| |||||||||||    
T  25195103 tcaaagataacacaaaaaa 25195085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 83 - 230
Target Start/End: Original strand, 8745587 - 8745734
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| ||  || ||||| ||||  |||| |||||||| |||| ||| | |||||||||||||||||||||||||| |||||||||| ||    
T  8745587 aaaattaaatgcaaactatttttaatttgctctcccttttattttttctataatcaacaaccaatgaaaattgtttttacatcttcctataaaacttatt 8745686  T
Q  183 tcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||  | ||||||| |||||||  | |||| |  |||||||||||||    
T  8745687 tcaagaataacacaagaaactatgttgcaaactactatgttttagttt 8745734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 83 - 205
Target Start/End: Original strand, 17336746 - 17336868
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| | |||||||||| ||||   ||||||||  || |||| |||   |||||||||||||||||||||||||| ||||||| || ||    
T  17336746 aaaattaaatgcaaagtgcattcaatttgctctccttttcatttactctataatcaactaccaatgaaaattgtttttacatcttcctataaaatttatt 17336845  T
Q  183 tcaaagaaaacacaaaaaactat 205  Q
    |||||||  ||||||||||||||    
T  17336846 tcaaagatgacacaaaaaactat 17336868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 83 - 200
Target Start/End: Complemental strand, 4039037 - 4038920
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||| ||| | |||||||||| |||| | ||||||||| || |||| |||   | |||||||||||||||||||||||| |||||||||| ||    
T  4039037 aaaattaaatgtaaagtgcattcaatttgctctctttttcattttctctataatcaactacaaatgaaaattgtttttacatcttcatataaaacttatt 4038938  T
Q  183 tcaaagaaaacacaaaaa 200  Q
    ||||| | ||||||||||    
T  4038937 tcaaaaataacacaaaaa 4038920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 73 - 187
Target Start/End: Original strand, 41755920 - 41756033
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||| |||| |||||||||| ||||||||||||||||| ||| ||||||| ||||||||||| |||||  ||||||| ||| ||||||||| ||  |||    
T  41755920 ttattatcatgaaattaaatgtaaattacattcaattttttctctctttca-tttttccataagcaataatcaatgaacattatttttacatttttctat 41756018  T
Q  173 aaaacttttttcaaa 187  Q
    |||| || |||||||    
T  41756019 aaaatttatttcaaa 41756033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 75 - 230
Target Start/End: Complemental strand, 44663953 - 44663801
Alignment:
Q  75 attctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataa 174  Q
    |||||| | |||||||| |||||| | |||||| ||| ||  | ||||||||| ||| ||| ||||||||||| |||||| ||||||||||||   ||||    
T  44663953 attctcgtgaaattaaacgcaaatcatattcaactttatccgtttttcattttgtccctaatcaatagccaataaaaattatttttacatctttccataa 44663854  T
Q  175 aacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    || || || ||||||||||||   ||||||||||| ||||||||||  ||||||||    
T  44663853 aatttattccaaagaaaacac---aaactatactctaaattcttataatttagttt 44663801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 204
Target Start/End: Original strand, 5217397 - 5217517
Alignment:
Q  84 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttttt 183  Q
    ||||||||||||| || |||||| | | || | ||||||||||| || ||||| |||| ||||| |||||||||||||||||||  ||| |||||| |||    
T  5217397 aaattaaatgcaatttgcattcattatgctttctctttcattttctctataactaataaccaataaaaattgtttttacatctttctatgaaacttattt 5217496  T
Q  184 caaagaaaacacaaaaaacta 204  Q
    ||| || ||||||| ||||||    
T  5217497 caaggataacacaagaaacta 5217517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 83 - 230
Target Start/End: Original strand, 27819663 - 27819810
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| |||||| ||||| ||||  |||| ||||| || ||||||||||  |||| |||| ||||||||||||||  |||||||||| ||    
T  27819663 aaaattaaatgcaaactacatttaatttgctctcccttttattttctctataaccaataatcaataaaaaatgtttttacatctttatataaaacttatt 27819762  T
Q  183 tcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |  | || || |||| |||||||  | |||| | ||||||||||||||    
T  27819763 tgtaggataatacaagaaactatgttacaaactattatgttttagttt 27819810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 215
Target Start/End: Original strand, 4480841 - 4480911
Alignment:
Q  145 aatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaatt 215  Q
    |||||||||| |||||||||||||  ||||||||| ||| ||||| |||||||||| ||||||||||||||    
T  4480841 aatgaaaattatttttacatcttccaataaaacttattttaaagataacacaaaaacctatactccaaatt 4480911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 124 - 205
Target Start/End: Complemental strand, 28497253 - 28497172
Alignment:
Q  124 ttttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactat 205  Q
    ||||||| ||||||||||   ||||||||||||||||||||||||  ||||||||| |||||| || ||||||| |||||||    
T  28497253 ttttttcaataaccaataagtaatgaaaattgtttttacatcttcccataaaacttatttcaaggataacacaagaaactat 28497172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 73 - 115
Target Start/End: Complemental strand, 13144127 - 13144085
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctct 115  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  13144127 ttattttcataaaattaaatgcaaattacattcaattttctct 13144085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 14693434 - 14693484
Alignment:
Q  144 caatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaaca 194  Q
    ||||||||||||||||||||||||||||||||| || ||||||||| ||||    
T  14693434 caatgaaaattgtttttacatcttcttataaaatttatttcaaagataaca 14693484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 6401679 - 6401756
Alignment:
Q  138 aatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaatt 215  Q
    |||| |||||| |||||||||||||||||| |||  |||||| ||||||  | |||||||||||||||||| ||||||    
T  6401679 aataaccaatggaaattgtttttacatctttttaggaaacttatttcaagaataacacaaaaaactatactacaaatt 6401756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 192
Target Start/End: Complemental strand, 33563681 - 33563558
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttcttt--cattttttccataaccaata--gccaatgaaaattgtttttacatcttc 168  Q
    |||||||||| |||||||| | |||||||||||||| | |||| ||||   |||||| | ||||||||| |  | |||||||||||||||||||||||||    
T  33563681 ttattctcatgaaattaaacgtaaattacattcaatctcctctctcttctccattttctgcataaccaaaatggtcaatgaaaattgtttttacatcttc 33563582  T
Q  169 ttataaaacttttttcaaagaaaa 192  Q
      ||||||||| ||| ||| ||||    
T  33563581 ccataaaacttatttaaaaaaaaa 33563558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 207
Target Start/End: Original strand, 34713532 - 34713657
Alignment:
Q  82 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 181  Q
    |||||||||||||||||| ||||||||||  |||   ||| ||||| |||||||    || ||||||| |||| ||||||||||||  || ||||||| |    
T  34713532 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgagaattatttttacatctttctagaaaacttat 34713631  T
Q  182 ttcaaagaaaacacaaaaaactatac 207  Q
    |||||  ||||||||||||| |||||    
T  34713632 ttcaagaaaaacacaaaaaattatac 34713657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 34890427 - 34890390
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatctt 55  Q
    ||||||||||||||||||||||||||||||||||||||    
T  34890427 gtcccaaaatataagcaaaaaagacaaacttttatctt 34890390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 7670749 - 7670813
Alignment:
Q  88 taaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaa 152  Q
    |||||| ||||||||||||||||||||| | || |||||| |||||||| |||||| ||||||||    
T  7670749 taaatgaaaattacattcaattttctctctattccattttctccataactaatagcaaatgaaaa 7670813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 230
Target Start/End: Original strand, 17314834 - 17314981
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    |||||||||| |||| | |||||||||| ||||   ||||||||| || |||| |||   ||||||||||||| |||||||| ||| ||| ||| || ||    
T  17314834 aaaattaaatccaaagtgcattcaatttgctctccttttcattttctctataatcaactaccaatgaaaattgcttttacattttcgtatgaaatttatt 17314933  T
Q  183 tcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||||||  ||||||||| ||||  | |||| |  |||||||||||||    
T  17314934 tcaaagatgacacaaaaagctatgttacaaactactatgttttagttt 17314981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 4047147 - 4047113
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttat 52  Q
    |||||||||||||||||||||||||||||||||||    
T  4047147 gtcccaaaatataagcaaaaaagacaaacttttat 4047113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 230
Target Start/End: Original strand, 8712577 - 8712675
Alignment:
Q  132 ataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||| |||| ||||| |||||||||||||||||||  |||||||||| || |||  | ||||||| |||||| ||| ||| ||  |||||||||||||    
T  8712577 ataactaataaccaataaaaattgtttttacatctttctataaaacttattccaataataacacaagaaactaaactgcaagttactatgttttagttt 8712675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 14576301 - 14576244
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaat 140  Q
    ||||||||||||||| | |||||||||| |||| ||||||||||| || |||||||||    
T  14576301 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataaccaat 14576244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 24892748 - 24892780
Alignment:
Q  21 ccaaaatataagcaaaaaagacaaacttttatc 53  Q
    |||||||||||||||||||||||||||||||||    
T  24892748 ccaaaatataagcaaaaaagacaaacttttatc 24892780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 179
Target Start/End: Complemental strand, 29147393 - 29147297
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactt 179  Q
    ||||||||||||||| | |||| |||||  |||   ||||||||| || |||| ||| | | |||||||||||||||| ||||||||||| ||||||    
T  29147393 aaaattaaatgcaaactgcatttaatttgatctccatttcattttctctataatcaacaactaatgaaaattgtttttccatcttcttattaaactt 29147297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 171 - 230
Target Start/End: Original strand, 2052955 - 2053014
Alignment:
Q  171 ataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||||| ||  ||||||||||||||||| |||||| | |||| ||||||||||||||    
T  2052955 ataaaacttattctaaagaaaacacaaaaaattatacttctaattattatgttttagttt 2053014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 13143671 - 13143706
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatc 53  Q
    |||||||||||||||||||||||| |||||||||||    
T  13143671 gtcccaaaatataagcaaaaaagataaacttttatc 13143706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 53
Target Start/End: Complemental strand, 13144210 - 13144179
Alignment:
Q  22 caaaatataagcaaaaaagacaaacttttatc 53  Q
    ||||||||||||||||||||||||||||||||    
T  13144210 caaaatataagcaaaaaagacaaacttttatc 13144179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 30576080 - 30576045
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatc 53  Q
    |||||||||||||||||||||||||||| |||||||    
T  30576080 gtcccaaaatataagcaaaaaagacaaatttttatc 30576045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 35525505 - 35525540
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatc 53  Q
    ||||||||||||||| ||||||||||||||||||||    
T  35525505 gtcccaaaatataagtaaaaaagacaaacttttatc 35525540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 36190678 - 36190713
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatc 53  Q
    |||||||||||||||||||||||||| |||||||||    
T  36190678 gtcccaaaatataagcaaaaaagacacacttttatc 36190713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 143 - 230
Target Start/End: Complemental strand, 40773499 - 40773412
Alignment:
Q  143 ccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||| |||||| ||||||||||||||  |||||||| ||   |  |||||||| |||| ||||||||||||| |||| |||||||||    
T  40773499 ccaataaaaattatttttacatcttctgttaaaacttattcttagaaaaacacacaaaattatactccaaattgttatattttagttt 40773412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 230
Target Start/End: Original strand, 45190700 - 45190735
Alignment:
Q  195 caaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||||||| ||||||||||||||||||||||||    
T  45190700 caaaaaactatgctccaaattcttatgttttagttt 45190735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 52
Target Start/End: Original strand, 36537990 - 36538020
Alignment:
Q  22 caaaatataagcaaaaaagacaaacttttat 52  Q
    |||||||||||||||||||||||||||||||    
T  36537990 caaaatataagcaaaaaagacaaacttttat 36538020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 52
Target Start/End: Complemental strand, 41809052 - 41809022
Alignment:
Q  22 caaaatataagcaaaaaagacaaacttttat 52  Q
    |||||||||||||||||||||||||||||||    
T  41809052 caaaatataagcaaaaaagacaaacttttat 41809022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 158
Target Start/End: Complemental strand, 374162 - 374103
Alignment:
Q  97 attacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgttt 158  Q
    ||||||||||||||| | ||||||||||||| ||||||| |||||| |||| ||||||||||    
T  374162 attacattcaatttttt-tttctttcattttctccataatcaatagacaat-aaaattgttt 374103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 230
Target Start/End: Complemental strand, 3225617 - 3225529
Alignment:
Q  145 aatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaa--act-atactccaaattcttatgttttagttt 230  Q
    |||| ||||| ||||||||| |||| || |||||| |||||| ||||||| |||||  ||| |||||||| ||| ||||||||||||||    
T  3225617 aatgcaaattatttttacatattctcatgaaacttatttcaaggaaaacataaaaagtacttatactccagattattatgttttagttt 3225529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 230
Target Start/End: Original strand, 7499817 - 7499866
Alignment:
Q  181 tttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||||||||| ||||||  ||||||| |||||| |||||||||||||    
T  7499817 tttcaaagaaaacgcaaaaagttatactctaaattcctatgttttagttt 7499866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 230
Target Start/End: Original strand, 11158675 - 11158712
Alignment:
Q  193 cacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  11158675 cacaaaaaattatattccaaattcttatgttttagttt 11158712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 199
Target Start/End: Complemental strand, 24510848 - 24510735
Alignment:
Q  86 attaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttca 185  Q
    |||||||||||||| ||||||||||  |||   ||| ||| | ||||||| || || ||||| |||||||||||||||||||   || |||||| || ||    
T  24510848 attaaatgcaaattgcattcaatttgttctactttttattctatccataatcattaaccaataaaaattgtttttacatctttccatgaaacttattcca 24510749  T
Q  186 aagaaaacacaaaa 199  Q
    |  |||||||||||    
T  24510748 ataaaaacacaaaa 24510735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 167
Target Start/End: Complemental strand, 31133186 - 31133101
Alignment:
Q  82 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctt 167  Q
    |||||||||||||||||| ||||||||||| |||   ||| ||||| |||||||    || ||||||| |||| ||||||||||||    
T  31133186 taaaattaaatgcaaattgcattcaattttttctcctttttattttctccataatttttaaccaatgagaattatttttacatctt 31133101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 159; Significance: 1e-84; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 18 - 230
Target Start/End: Original strand, 14805810 - 14806022
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaa-annnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctt 116  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |         |||||||||||||||||||||||||||||||||||||||||||||    
T  14805810 gtcccaaaatataagcaaaacagacaaacttttatcttttccaagatttttttttgttattctcataaaattaaatgcaaattacattcaattttctctt 14805909  T
Q  117 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||    
T  14805910 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaac-tttttcaaagaaaatacaaaaaactatactccaaattc 14806008  T
Q  217 ttatgttttagttt 230  Q
    ||||||||||||||    
T  14806009 ttatgttttagttt 14806022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 18 - 230
Target Start/End: Original strand, 15252804 - 15253016
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaa-annnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctt 116  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |         |||||||||||||||||||||||||||||||||||||||||||||    
T  15252804 gtcccaaaatataagcaaaacagacaaacttttatcttttccaagatttttttttgttattctcataaaattaaatgcaaattacattcaattttctctt 15252903  T
Q  117 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||    
T  15252904 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaac-tttttcaaagaaaatacaaaaaactatactccaaattc 15253002  T
Q  217 ttatgttttagttt 230  Q
    ||||||||||||||    
T  15253003 ttatgttttagttt 15253016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 18 - 230
Target Start/End: Complemental strand, 46760478 - 46760264
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnn--gttattctcataaaattaaatgcaaattacattcaattttctct 115  Q
    ||||||||||||||| ||||||||||||||||||| |||| |||            ||||||||||||||||||||||||||||||||||||| ||||||    
T  46760478 gtcccaaaatataagtaaaaaagacaaacttttatttttttcaatattttttttttgttattctcataaaattaaatgcaaattacattcaatattctct 46760379  T
Q  116 ttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaatt 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  46760378 ttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactatactccaaatt 46760279  T
Q  216 cttatgttttagttt 230  Q
    |||||||||||||||    
T  46760278 cttatgttttagttt 46760264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 18 - 230
Target Start/End: Complemental strand, 25737847 - 25737634
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaa-annnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctt 116  Q
    |||||||||||||||||||||| | ||||||||||||||||||| |         |||||||||||||||||||||||||||||||||||||||||||||    
T  25737847 gtcccaaaatataagcaaaaaaaaaaaacttttatcttttccaagatttttttttgttattctcataaaattaaatgcaaattacattcaattttctctt 25737748  T
Q  117 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||| |||||||     
T  25737747 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacacaaaactataccccaaattt 25737648  T
Q  217 ttatgttttagttt 230  Q
    ||||||||||||||    
T  25737647 ttatgttttagttt 25737634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 18 - 230
Target Start/End: Original strand, 18102469 - 18102683
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaa-annnnnnnnngtt-attctcataaaattaaatgcaaattacattcaattttctct 115  Q
    |||||||||||||||||||||||||||||||||||||||| ||| |         ||| |||||||||||||||||||||||||||||||||||||| ||    
T  18102469 gtcccaaaatataagcaaaaaagacaaacttttatctttttcaagatttttttttgtttattctcataaaattaaatgcaaattacattcaattttcact 18102568  T
Q  116 ttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaatt 215  Q
     |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  18102569 ctctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaattatactccaaatt 18102668  T
Q  216 cttatgttttagttt 230  Q
    |||||||||||||||    
T  18102669 cttatgttttagttt 18102683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 18 - 230
Target Start/End: Original strand, 45485893 - 45486108
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnn---gttattctcataaaattaaatgcaaattacattcaattttctc 114  Q
    |||| ||||||||||||||||||||||| |||||||||||||||             |||||||||||||||||||||||||||||||||||||||||||    
T  45485893 gtccaaaaatataagcaaaaaagacaaaattttatcttttccaatttttttttttttgttattctcataaaattaaatgcaaattacattcaattttctc 45485992  T
Q  115 tttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaat 214  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  45485993 tttctttcattttttccataaccaatagccaatgaaaattatttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaat 45486092  T
Q  215 tcttatgttttagttt 230  Q
    | ||||||||||||||    
T  45486093 ttttatgttttagttt 45486108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 19 - 230
Target Start/End: Complemental strand, 19912988 - 19912776
Alignment:
Q  19 tcccaaaatataagcaaaaaagacaaacttttatcttttccaa-annnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctcttt 117  Q
    |||||||||||||  |||||||||||||||||||||||||||| |         ||||||||||| ||||||||||||||||||||||||||||||||||    
T  19912988 tcccaaaatataaataaaaaagacaaacttttatcttttccaagatttttttttgttattctcatgaaattaaatgcaaattacattcaattttctcttt 19912889  T
Q  118 ctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattct 217  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||  ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  19912888 ctttcattttttccataaccaataaccaatgaaaattgtttttacattttactataaaactttttccaaagaaaacacaaaaaactatactccaaattct 19912789  T
Q  218 tatgttttagttt 230  Q
    |||||||||||||    
T  19912788 tatgttttagttt 19912776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 18 - 230
Target Start/End: Original strand, 35923192 - 35923404
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaa-annnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctt 116  Q
    ||||||||||||||  |||||||| ||||||||||||||| ||| |         |||||||||||||||||||||||||||||||||||||||||||||    
T  35923192 gtcccaaaatataataaaaaaagataaacttttatctttttcaatatttttttttgttattctcataaaattaaatgcaaattacattcaattttctctt 35923291  T
Q  117 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||| |||||||||||||||||||     
T  35923292 tctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctataaaactttttccaaagaaaacac-aaaaactatactccaaattt 35923390  T
Q  217 ttatgttttagttt 230  Q
    ||||||||||||||    
T  35923391 ttatgttttagttt 35923404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 6191041 - 6191198
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||||||||||||| |||||||||| |||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  6191041 ttattctcataaaattaaatgaaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcctat 6191140  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  6191141 aaaacttttttaaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 6191198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 73 - 226
Target Start/End: Complemental strand, 20123844 - 20123691
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||  |||    
T  20123844 ttattctcataaaattaaatgcaaattacattcaattttctttctctttcattttttccataagcaatagccaatgaaaattgtttttacatcttgctat 20123745  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 226  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  20123744 aaaactttttccaaagaatacacaaaaaactatactccaaattcttatgtttta 20123691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 25944572 - 25944729
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  25944572 ttattctcataaaattaaatgcaaattacattcaattttctctctcttttattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 25944671  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||||||||| |||||||||||||||||  |||||||||||||||||| |||||||||    
T  25944672 aaaactttttccaaagaaaacacaaaaacttatactccaaattcttatattttagttt 25944729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 4910797 - 4910642
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||    
T  4910797 ttatgctcataaaattaaatgcaaattacattcaattttatctctctttcattttttccataatcaatagccaatgaaaattatttttacatcttcctat 4910698  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||||||  ||||||||||||||||  |||||| |||||||||||||||||||||    
T  4910697 aaaactttttctaaagaaaacacaaaaa--tatacttcaaattcttatgttttagttt 4910642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 47779600 - 47779757
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||  ||    
T  47779600 ttattctcatgaaattaaatgcaaattacatttaattttctctttcttttattttttccataaccagttgccaatgaaaattgtttttacatcttcccat 47779699  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
     |||||| ||  ||||||||||||||||||||| || |||||||||||| ||||||||    
T  47779700 gaaacttattctaaagaaaacacaaaaaactatgctacaaattcttatgctttagttt 47779757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 22632085 - 22632242
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||| ||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||  ||    
T  22632085 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttccattttttccataaccaatatccaatgaaaattgtttttacatcttcccat 22632184  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
     |||||| |||||||||||||||||||| |||| || |||| | ||||| ||||||||    
T  22632185 gaaacttatttcaaagaaaacacaaaaatctatgctacaaacttttatgctttagttt 22632242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 73 - 214
Target Start/End: Complemental strand, 47557765 - 47557622
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||||  ||||||||||||||||||||||||||||||| |||    
T  47557765 ttattctcatagaattaaatgcaaattacatttaattttctttctctttcattttttccataattaatagccaatgaaaattgtttttacatcttcctat 47557666  T
Q  173 aaaactttttt--caaagaaaacacaaaaaactatactccaaat 214  Q
    |||  ||||||   ||| ||||||||||||||||||||||||||    
T  47557665 aaattttttttaaaaaaaaaaacacaaaaaactatactccaaat 47557622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 111 - 226
Target Start/End: Complemental strand, 12632470 - 12632355
Alignment:
Q  111 tctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactcc 210  Q
    ||||| ||||| |||||||||| | ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||    
T  12632470 tctctctcttttattttttccacagccaatagccaatgaaaattgtttttacatcttcctatgaaacttttttcaaagaaaacataaaaaactatactcc 12632371  T
Q  211 aaattcttatgtttta 226  Q
    ||||||||||||||||    
T  12632370 aaattcttatgtttta 12632355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 11780014 - 11780170
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||| |||||| | |||||  ||||| ||||| ||||| |||||||||||||  ||    
T  11780014 ttattctcataaaattaaatgcaaattacatcaaattttctctttcttccattttcttcataagaaatagtcaatg-aaattatttttacatcttccaat 11780112  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||| || ||| ||||||||||| |||||||||| ||||||||||||| |||||||||    
T  11780113 aaaatttattttaaagaaaacacgaaaaactatattccaaattcttatattttagttt 11780170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 14574560 - 14574717
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||||||||||||||||||||| | ||||||||| || |||| |||||| | |||||||||||| ||||| ||||| |||||||||||||  ||    
T  14574560 ttattctcataaaattaaatgcaaattaaaatcaattttcactctcttccattttcttcataaccaatagacaatggaaattatttttacatcttcccat 14574659  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
     |||||| ||   ||||||||||||||||||||||||||||||||||| |||| ||||    
T  14574660 gaaacttattatcaagaaaacacaaaaaactatactccaaattcttatattttggttt 14574717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 44682874 - 44683030
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||| ||||||| |||||||||||| ||||||||| | |||||||||| | ||||||||||||| |||||||||||||||||||||||||  ||    
T  44682874 ttattctcatgaaattaattgcaaattacatccaattttctatatctttcatttct-ccataaccaatagtcaatgaaaattgtttttacatcttcgcat 44682972  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
     |||||| || |||| ||||||||||| | |||||||||||||||||| || ||||||    
T  44682973 caaacttattccaaaaaaaacacaaaatattatactccaaattcttattttctagttt 44683030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 73 - 192
Target Start/End: Original strand, 9158086 - 9158204
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||| ||||||||||||||||||||||||||| ||| | | |||||||||||||| ||||||||| ||||| ||||||||||||||||||||| |||    
T  9158086 ttattcttataaaattaaatgcaaattacattcaaatttttttctctttcattttttc-ataaccaatggccaaagaaaattgtttttacatcttcctat 9158184  T
Q  173 aaaacttttttcaaagaaaa 192  Q
    ||||||||||| ||| ||||    
T  9158185 aaaactttttttaaaaaaaa 9158204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 15995715 - 15995873
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||||||||||||||||||||| | ||||||||| || |||| |||||| | ||||||||||| |||||| ||||| ||||||||||||   ||    
T  15995715 ttattctcataaaattaaatgcaaattaaaatcaattttcactctcttccattttcttcataaccaataaccaatggaaattatttttacatctttccat 15995814  T
Q  173 aaaacttttttcaaagaaaacac-aaaaaactatactccaaattcttatgttttagttt 230  Q
     |||||| ||   |||||||||| ||||||||||||||||||||||||| |||| ||||    
T  15995815 gaaacttattatgaagaaaacacaaaaaaactatactccaaattcttatattttggttt 15995873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 219
Target Start/End: Complemental strand, 2610732 - 2610586
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctt-tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttctta 171  Q
    |||||||||| ||||||| |||||||||||||||||||| |||| |||| |||||| |||||||||||||||||| ||||| ||||||||||||||  ||    
T  2610732 ttattctcatgaaattaagtgcaaattacattcaatttt-tcttctcttccattttctccataaccaatagccaaagaaaaatgtttttacatctttcta 2610634  T
Q  172 taaaacttttttcaaagaaaacacaaaaaactatactccaaattctta 219  Q
    ||||  || || ||||| || | ||||||| |||||||||||||||||    
T  2610633 taaattttattccaaaggaagcgcaaaaaaatatactccaaattctta 2610586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 79 - 230
Target Start/End: Original strand, 48413723 - 48413866
Alignment:
Q  79 tcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaact 178  Q
    |||| ||||||||||||||||| ||||||||||||||  |||  ||||| |||||||||||||| ||||||||||||||||| |||||||| ||||||||    
T  48413723 tcatgaaattaaatgcaaatta-attcaattttctct--cttctattttctccataaccaatagtcaatgaaaattgtttttgcatcttctcataaaact 48413819  T
Q  179 tttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    | ||   || |||||||  |||| ||||||||||||||||||||| ||||||    
T  48413820 tatt---aaaaaaacac--aaaattatactccaaattcttatgttgtagttt 48413866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 73 - 213
Target Start/End: Complemental strand, 35068999 - 35068872
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||||| ||||||||||||||||||||||||              |||| || |||||||||||| ||| |||||||||||||||||||| |||    
T  35068999 ttattctcataatattaaatgcaaattacattcaatt--------------ttttctctataaccaatagctaattaaaattgtttttacatcttcctat 35068914  T
Q  173 aaaacttttttcaaagaaaacac-aaaaaactatactccaaa 213  Q
    ||||||||||||||||||||||| ||||||||||| ||||||    
T  35068913 aaaacttttttcaaagaaaacacaaaaaaactatattccaaa 35068872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 83 - 205
Target Start/End: Original strand, 39170540 - 39170662
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| | |||||||||| || | ||||||||||| || |||| ||||  | |||||||||||||||||||||||| |||||||||| ||    
T  39170540 aaaattaaatgcaaagtgcattcaatttgctatctctttcattttctcaataatcaatgacaaatgaaaattgtttttacatcttcgtataaaacttatt 39170639  T
Q  183 tcaaagaaaacacaaaaaactat 205  Q
    |||| || ||||||| |||||||    
T  39170640 tcaaggataacacaataaactat 39170662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 72 - 231
Target Start/End: Complemental strand, 4237880 - 4237720
Alignment:
Q  72 gttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttctta 171  Q
    |||||||| |||||||||||||||||||| |||||||| | | | |||| |||||| | | ||| ||||||||||| |||||| |||||||||||||| |    
T  4237880 gttattctaataaaattaaatgcaaattatattcaattatatttctcttccattttcttcctaatcaatagccaattaaaattatttttacatcttctca 4237781  T
Q  172 taaaacttttttcaaagaaaacac-aaaaaactatactccaaattcttatgttttagtttg 231  Q
    | ||| || ||||||| |||| || ||||||||||| |  |||||||||| ||||| ||||    
T  4237780 tgaaagttatttcaaaaaaaatacaaaaaaactatattttaaattcttatattttactttg 4237720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 73 - 226
Target Start/End: Original strand, 16917468 - 16917620
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||| |||| |||||||||||||||||| ||||||||||||| | |  ||||||  | |||||||||||  ||||||||||||||||||||||||  ||    
T  16917468 ttattttcattaaattaaatgcaaattactttcaattttctctatttcccattttcac-ataaccaatagttaatgaaaattgtttttacatcttcccat 16917566  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 226  Q
     |||||| || ||||||||| ||||||   |||| | |||||| ||||||||||    
T  16917567 gaaacttattccaaagaaaaaacaaaatgttatatttcaaatttttatgtttta 16917620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 27810898 - 27810803
Alignment:
Q  74 tattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttct 169  Q
    ||||||||| |||||||||||||||||||||||||||||  | |||| |||||| |  |||| ||||| ||||| |||||||||||||||||||||    
T  27810898 tattctcatgaaattaaatgcaaattacattcaattttccatctcttccattttctatataatcaataaccaataaaaattgtttttacatcttct 27810803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 83 - 206
Target Start/End: Original strand, 38260322 - 38260445
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| | |||| ||||| |||| ||||||||||| || ||||  |||| |||||||||||| |||||||| |||  |||||||||| ||    
T  38260322 aaaattaaatgcaaagtgcatttaatttgctctctctttcattttctcaataataaataaccaatgaaaattatttttacaactttctataaaacttatt 38260421  T
Q  183 tcaaagaaaacacaaaaaactata 206  Q
    ||||  | ||||||||||||||||    
T  38260422 tcaagaataacacaaaaaactata 38260445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 12633207 - 12633110
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnngtt-attctcataaaattaaatgcaaattacattcaattttctc 114  Q
    |||||||||||||| ||||| |||||||||||||||||||||||          ||| ||||||||||||||||||||||||||||||||||||||||    
T  12633207 gtcccaaaatataatcaaaatagacaaacttttatcttttccaagattttttttgtttattctcataaaattaaatgcaaattacattcaattttctc 12633110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 98 - 204
Target Start/End: Complemental strand, 31550042 - 31549936
Alignment:
Q  98 ttacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaa 197  Q
    |||||||||||||||| |||||  | ||||| ||||||||||| | |||||||| |||||||||||||||| ||||||| || ||  ||||||||| |||    
T  31550042 ttacattcaattttctttttctcccctttttcccataaccaattgtcaatgaaagttgtttttacatcttcctataaaatttattctaaagaaaacgcaa 31549943  T
Q  198 aaaacta 204  Q
    |||||||    
T  31549942 aaaacta 31549936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 83 - 205
Target Start/End: Complemental strand, 31769116 - 31768994
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| | |||||||||| ||||   ||| ||||| || |||| |||    ||||||||||||||||||||||||| |||||||||| ||    
T  31769116 aaaattaaatgcaaagtgcattcaatttgctctcatttttattttctctataatcaactatcaatgaaaattgtttttacatcttcctataaaacttatt 31769017  T
Q  183 tcaaagaaaacacaaaaaactat 205  Q
    |||||||  ||||||||||||||    
T  31769016 tcaaagatgacacaaaaaactat 31768994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 95 - 178
Target Start/End: Complemental strand, 8015813 - 8015732
Alignment:
Q  95 aaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaact 178  Q
    ||||| |||||||||||||||  ||| ||||||||| |||| ||||| ||||| ||||||||||||||||||||||||||||||    
T  8015813 aaattgcattcaattttctct--cttgcattttttctataatcaataaccaataaaaattgtttttacatcttcttataaaact 8015732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 82 - 230
Target Start/End: Complemental strand, 35084215 - 35084067
Alignment:
Q  82 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 181  Q
    |||||||||||||||||| |||| |||||  |||   ||||||||| ||||||| || || ||||| | ||||||||||||||||| |||| |||||| |    
T  35084215 taaaattaaatgcaaattgcattgaatttgttctccttttcattttctccataatcattatccaataagaattgtttttacatctttttatgaaacttat 35084116  T
Q  182 ttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||||  | ||||||||||||||||   ||||||  | |||||||||||    
T  35084115 ttcaagaagaacacaaaaaactataactcaaattactgtgttttagttt 35084067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 179
Target Start/End: Complemental strand, 24151734 - 24151640
Alignment:
Q  84 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactt 179  Q
    |||||| ||||||| |||||||||||| |||| |||||| |||| || ||||||||||  || |||||||||||||||||||||| ||||||||||    
T  24151734 aaattacatgcaaagtacattcaatttgctctctctttc-ttttctcaataaccaataatcagtgaaaattgtttttacatcttcctataaaactt 24151640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 230
Target Start/End: Complemental strand, 35888123 - 35887976
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||| ||||||||| | |||||||||| |||| | ||| ||||| || |||| |||   | |||||||||||||||||||||||| ||||||| || ||    
T  35888123 aaaataaaatgcaaagtgcattcaatttgctctcttttttattttctctataatcaactactaatgaaaattgtttttacatcttcctataaaagttatt 35888024  T
Q  183 tcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||| ||||||||||| |||  | |||| |  |||||||||||||    
T  35888023 tcaaagataacacaaaaaattatgttacaaactactatgttttagttt 35887976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 4069043 - 4069109
Alignment:
Q  117 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttttt 183  Q
    |||| |||||| ||||||||||||| |||||||||||| ||||||||||||  ||||||||||||||    
T  4069043 tcttccattttctccataaccaataaccaatgaaaattctttttacatctttctataaaactttttt 4069109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 230
Target Start/End: Complemental strand, 37767172 - 37767026
Alignment:
Q  84 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttttt 183  Q
    ||||||| |||||||| |||| |||||  |||  || |||||||||| ||| | ||||    |||||||||||||||| || |||  || ||| |  |||    
T  37767172 aaattaagtgcaaattgcatttaatttgttctccctctcattttttctatagcaaataattgatgaaaattgtttttatatgttcccatgaaattagttt 37767073  T
Q  184 caaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
     ||||||||||||||||||||||||||||||| | ||||||||||||    
T  37767072 taaagaaaacacaaaaaactatactccaaattatcatgttttagttt 37767026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 82 - 230
Target Start/End: Original strand, 33153039 - 33153187
Alignment:
Q  82 taaaattaaatgcaaattacattcaattttctctttctttc-attttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttt 180  Q
    |||||||||||||||||| ||||||||||  |||  ||||| ||||| ||||||| || || ||||| | |||||||||||||||||   |||||| ||     
T  33153039 taaaattaaatgcaaattgcattcaatttgttctc-ctttctattttctccataatcattaaccaataagaattgtttttacatctttccataaaattta 33153137  T
Q  181 tttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||  | ||||||||||| |||||| |||| | ||||||||| ||||    
T  33153138 tttcaagaagaacacaaaaaattatacttcaaactattatgtttttgttt 33153187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 25944485 - 25944522
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatctt 55  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25944485 gtcccaaaatataagcaaaaaagacaaacttttatctt 25944522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 16562688 - 16562778
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaa--annnnnnnnngttattctcataaaattaaatgcaaattacattca 106  Q
    ||||||||||||||| |||||||||||| |||||||||||||||            |||||||||||||||||||||||||||||| ||||    
T  16562688 gtcccaaaatataagtaaaaaagacaaatttttatcttttccaattttttttttttgttattctcataaaattaaatgcaaattactttca 16562778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 106
Target Start/End: Complemental strand, 16602974 - 16602884
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaa--annnnnnnnngttattctcataaaattaaatgcaaattacattca 106  Q
    ||||||||||||||| |||||||||||| |||||||||||||||            |||||||||||||||||||||||||||||| ||||    
T  16602974 gtcccaaaatataagtaaaaaagacaaatttttatcttttccaattttttttttttgttattctcataaaattaaatgcaaattactttca 16602884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 19492559 - 19492400
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||| ||| ||||||||| ||||||| |||||||||||| | ||||  ||||| ||||||||||| || | || |||||||||||| ||| ||   ||    
T  19492559 ttattcgcatgaaattaaatacaaattatattcaattttctttctcttctattttctccataaccaacagtcgataaaaattgtttttgcatattaccat 19492460  T
Q  173 aa--aacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
     |  || ||| || ||| |||| |||||||  ||||||| ||||| ||||||||||||||    
T  19492459 gatgaaatttattaaaaaaaaatacaaaaagttatactctaaatttttatgttttagttt 19492400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 82 - 230
Target Start/End: Original strand, 40560382 - 40560530
Alignment:
Q  82 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 181  Q
    ||||||||||||||| || |||| |||||  |||   ||| ||||| |||||||    || ||||||| |||| ||||||||||||  |||||||||| |    
T  40560382 taaaattaaatgcaagttgcatttaatttattctcctttttattttctccataatttttaaccaatgagaattatttttacatctttctataaaacttat 40560481  T
Q  182 ttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||| || ||||||||||| |||||  |||||| ||| || |||||||    
T  40560482 ttcaaggagaacacaaaaaattatacctcaaattattaagtgttagttt 40560530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 205
Target Start/End: Original strand, 10248594 - 10248657
Alignment:
Q  143 ccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaa-aaaactat 205  Q
    |||||||||||||||||||||||||  |||||||||| |||||| || ||||||| ||||||||    
T  10248594 ccaatgaaaattgtttttacatctttctataaaacttatttcaaggataacacaagaaaactat 10248657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 82 - 201
Target Start/End: Complemental strand, 21654235 - 21654116
Alignment:
Q  82 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 181  Q
    |||||||||||||||||||||||||||||  |||   ||||||||| |||||||    || ||||||| |||| ||||||||||||   || |||||| |    
T  21654235 taaaattaaatgcaaattacattcaatttgttctccttttcattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttat 21654136  T
Q  182 ttcaaagaaaacacaaaaaa 201  Q
    | ||| || |||||||||||    
T  21654135 tccaaggagaacacaaaaaa 21654116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 47557967 - 47557928
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatctttt 57  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  47557967 gtcccaaaatataagcaaaaaagacaaacttttatgtttt 47557928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 205
Target Start/End: Original strand, 3777984 - 3778106
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||| ||| | |||||||||| || | ||||||||||| || |||||||||   ||||||||||| |||||| || ||| |  |||| || ||    
T  3777984 aaaattaaatgaaaagtgcattcaatttgctttctctttcattttctcaataaccaatgatcaatgaaaattatttttatattttcctggaaaaattatt 3778083  T
Q  183 tcaaagaaaacacaaaaaactat 205  Q
    |||| || ||||||| |||||||    
T  3778084 tcaaggataacacaataaactat 3778106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 213
Target Start/End: Original strand, 29713196 - 29713325
Alignment:
Q  84 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttttt 183  Q
    ||||||||||||||||| ||| | | | | || ||||||||||| || ||||  |||| ||||||||||||||||||||| |||  ||| ||| || ||     
T  29713196 aaattaaatgcaaattatatttattataccctctctttcattttctctataattaatatccaatgaaaattgtttttacaactttctatgaaagttattc 29713295  T
Q  184 caaagaaaacacaaaaaactatactccaaa 213  Q
     |||||  |||||| |||||||||| ||||    
T  29713296 taaagatgacacaagaaactatactacaaa 29713325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 199
Target Start/End: Original strand, 30082353 - 30082470
Alignment:
Q  82 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 181  Q
    |||||||||||||||||| ||||||||||  ||| | ||  ||| | ||||||| || || ||||| | ||||||||||||||||| | | ||||||| |    
T  30082353 taaaattaaatgcaaattgcattcaatttattctcttttctattctctccataatcattaaccaataagaattgtttttacatcttttcagaaaacttat 30082452  T
Q  182 ttcaaagaaaacacaaaa 199  Q
    |||||  | |||||||||    
T  30082453 ttcaagaataacacaaaa 30082470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 121
Target Start/End: Original strand, 4068972 - 4069020
Alignment:
Q  74 tattctcataaaattaaatgcaaattacattcaa-ttttctctttcttt 121  Q
    ||||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  4068972 tattctcatgaaattaaatacaaattacattcaatttttctctttcttt 4069020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 164
Target Start/End: Original strand, 22369233 - 22369313
Alignment:
Q  84 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacat 164  Q
    ||||||||||||| || |||||| | | |||| ||||||||||| || ||||| |||| ||||| |||||| |||||||||    
T  22369233 aaattaaatgcaatttgcattcattatgctctctctttcattttgtctataactaataaccaataaaaattatttttacat 22369313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 39174193 - 39174229
Alignment:
Q  21 ccaaaatataagcaaaaaagacaaacttttatctttt 57  Q
    |||||||||||| ||||||||||||||||||||||||    
T  39174193 ccaaaatataagtaaaaaagacaaacttttatctttt 39174229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 33092792 - 33092669
Alignment:
Q  84 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaa-ttgtttttacatcttcttataaaacttttt 182  Q
    |||||||||||||| | |||||| | | ||||| ||||||||||  | ||||| |||| ||||| |||| |||||||||||| ||  ||| |||||| ||    
T  33092792 aaattaaatgcaaaatgcattcattatgctcttcctttcattttcactataactaataaccaataaaaaattgtttttacatttttctatgaaacttatt 33092693  T
Q  183 tcaaagaaaacacaaaaaactata 206  Q
    | || || ||||||| ||||||||    
T  33092692 ttaatgataacacaagaaactata 33092669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 18800953 - 18800919
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttat 52  Q
    |||||||||||||||||||||||||| ||||||||    
T  18800953 gtcccaaaatataagcaaaaaagacatacttttat 18800919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 31280592 - 31280546
Alignment:
Q  174 aaacttttttcaaagaaaacacaaaaaactatactccaaattcttat 220  Q
    |||||| |||||||||||  |||||| ||||||||||||||||||||    
T  31280592 aaacttatttcaaagaaattacaaaatactatactccaaattcttat 31280546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 47778681 - 47778715
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttat 52  Q
    |||||||||||||||||||||||||||| ||||||    
T  47778681 gtcccaaaatataagcaaaaaagacaaatttttat 47778715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 207
Target Start/End: Original strand, 3157436 - 3157561
Alignment:
Q  82 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 181  Q
    ||||||||||||||| || ||||||||||  | |   ||| ||||| |||||||    || ||||||| |||| ||||||||||||   || |||||| |    
T  3157436 taaaattaaatgcaagttgcattcaatttgttttcctttttattttctccataatttttaaccaatgagaattatttttacatctttccatgaaacttat 3157535  T
Q  182 ttcaaagaaaacacaaaaaactatac 207  Q
    |||||||| ||||||||||| |||||    
T  3157536 ttcaaagagaacacaaaaaattatac 3157561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 9158000 - 9158033
Alignment:
Q  19 tcccaaaatataagcaaaaaagacaaacttttat 52  Q
    ||||||||||||| ||||||||||||||||||||    
T  9158000 tcccaaaatataatcaaaaaagacaaacttttat 9158033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 41890356 - 41890303
Alignment:
Q  82 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataa 135  Q
    |||||||||||||||||||||||||||||  ||||  ||| ||||| |||||||    
T  41890356 taaaattaaatgcaaattacattcaatttgttcttctttttattttctccataa 41890303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 44682784 - 44682816
Alignment:
Q  21 ccaaaatataagcaaaaaagacaaacttttatc 53  Q
    ||||||| |||||||||||||||||||||||||    
T  44682784 ccaaaatgtaagcaaaaaagacaaacttttatc 44682816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 159; Significance: 1e-84; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 18 - 230
Target Start/End: Original strand, 21542358 - 21542571
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaa-annnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctt 116  Q
    |||||||||||||||||||||||||||||||||||||||||||| |         ||||||||||||| |||||||||||||||||||||||||||| ||    
T  21542358 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaatatttttttttgttattctcataatattaaatgcaaattacattcaattttctttt 21542457  T
Q  117 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 216  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  21542458 tctttcattttttccataaccaatagccaataaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattc 21542557  T
Q  217 ttatgttttagttt 230  Q
    ||||||||||||||    
T  21542558 ttatgttttagttt 21542571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 18 - 230
Target Start/End: Complemental strand, 35129276 - 35129062
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaa-annnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctt 116  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |         ||||||||| |||||||||||||||||||||||||||||||||||    
T  35129276 gtcccaaaatacaagcaaaaaagacaaacttttatcttttccaagatttttttttgttattctcgtaaaattaaatgcaaattacattcaattttctctt 35129177  T
Q  117 tctttcattttttccataaccaatagccaatgaaaattgttt-ttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaatt 215  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  35129176 tctttcattttttccataaccaataaccaatgaaaattgtttattacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaatt 35129077  T
Q  216 cttatgttttagttt 230  Q
    |||||||||||||||    
T  35129076 cttatgttttagttt 35129062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 72 - 230
Target Start/End: Complemental strand, 11082411 - 11082253
Alignment:
Q  72 gttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttctta 171  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||    
T  11082411 gttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctcccta 11082312  T
Q  172 taaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  11082311 taaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 11082253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 18 - 230
Target Start/End: Complemental strand, 3095942 - 3095728
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnn---gttattctcataaaattaaatgcaaattacattcaattttctc 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||||||||||||||    
T  3095942 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaagatttttttttttgttattctcataaaattaaatgcaaattacattcaattttctc 3095843  T
Q  115 tttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaat 214  Q
    ||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||    
T  3095842 tttatttcattttttccataatcaatagccaatgaaaattgtttttacatcttcctataaaac-ttttccaaagaaaacacaaaaaactatactccaaat 3095744  T
Q  215 tcttatgttttagttt 230  Q
    | ||||| ||||||||    
T  3095743 ttttatgctttagttt 3095728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 21 - 226
Target Start/End: Complemental strand, 34177859 - 34177653
Alignment:
Q  21 ccaaaatataagcaaaaaagacaaacttttatcttttccaa-annnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttct 119  Q
    |||||||||||| |||||| ||||||||||||||||||||| |         |||||||||||||||||||||||||||||||||||||| |||||||||    
T  34177859 ccaaaatataagtaaaaaacacaaacttttatcttttccaagatttttttttgttattctcataaaattaaatgcaaattacattcaattatctctttct 34177760  T
Q  120 ttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattctta 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||  ||||| ||||||||||||||||||||||| ||||||||||||    
T  34177759 ttcattttttccataaccaatagccaatgaaaattgtttttacatctccctataaatttttttccaaagaaaacacaaaaaactatattccaaattctta 34177660  T
Q  220 tgtttta 226  Q
    |||||||    
T  34177659 tgtttta 34177653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 7275040 - 7274883
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||| ||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  7275040 ttattctcatgaaattaaatacaaattacatttaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcccat 7274941  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
     |||||| || ||||||||| |||||||||||| || |||||||||||||||||||||    
T  7274940 gaaacttattccaaagaaaatacaaaaaactatgctacaaattcttatgttttagttt 7274883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 12461594 - 12461437
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||| ||||||||| |||||||||||||||||||| | ||||  ||||| |||||||||||||||||||||||||||||||||||||||  |||    
T  12461594 ttattctcatgaaattaaatccaaattacattcaattttctgtctcttctattttctccataaccaatagccaatgaaaattgtttttacatctttctat 12461495  T
Q  173 -aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
     ||||||| |||||||||||| | ||||||||||| |||||||||| ||||||||||||    
T  12461494 aaaaacttatttcaaagaaaata-aaaaaactatattccaaattctcatgttttagttt 12461437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 30794357 - 30794200
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||| ||||||||||||||||| ||| |||||||||| ||||  ||||| ||||| |||||||||||||||||| ||||||||||||||| |||    
T  30794357 ttattctcatgaaattaaatgcaaattagatttaattttctctctcttctattttctccatcaccaatagccaatgaaaaatgtttttacatcttcctat 30794258  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||| || |||| |||||| |||||| |||||| ||||||||||| |||||||||    
T  30794257 aaaacttattccaaataaaacataaaaaattatacttcaaattcttatattttagttt 30794200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 73 - 207
Target Start/End: Original strand, 31107187 - 31107320
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||| |||||||||||||||||||||||||||||| || | |||||||||||||| |||| |||||| |||| |||||  ||||||||| |||||||    
T  31107187 ttattcttataaaattaaatgcaaattacattcaattt-ctttctctttcattttttctataatcaatagtcaataaaaatcatttttacattttcttat 31107285  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatac 207  Q
    |||  ||||||||||||||||||||||||||||||    
T  31107286 aaattttttttcaaagaaaacacaaaaaactatac 31107320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 73 - 226
Target Start/End: Complemental strand, 17751909 - 17751756
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||| || ||| |||||||||||||||||||||||| ||| |||| |||||| ||||||| |||||||||||||  | ||||||||||| || | |     
T  17751909 ttattcttatgaaactaaatgcaaattacattcaattttttctctcttccattttctccataatcaatagccaatgagcactgtttttacattttttaaa 17751810  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 226  Q
    |||||||  |  |||||||||||||||||||||||||||||||||||| |||||    
T  17751809 aaaacttaatctaaagaaaacacaaaaaactatactccaaattcttatatttta 17751756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 205
Target Start/End: Original strand, 4031991 - 4032113
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| | |||||||||| |||| | ||||||||| || |||| |||   ||||||||||||||||||||||||||  ||||||||| ||    
T  4031991 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttccgataaaacttatt 4032090  T
Q  183 tcaaagaaaacacaaaaaactat 205  Q
    ||||||| |||||||||||||||    
T  4032091 tcaaagataacacaaaaaactat 4032113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 83 - 205
Target Start/End: Original strand, 4987947 - 4988069
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| | |||||||||| ||||   ||||||||| || |||| |||   |||||||||||| ||||||||||||| |||||||||| ||    
T  4987947 aaaattaaatgcaaaatgcattcaatttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatt 4988046  T
Q  183 tcaaagaaaacacaaaaaactat 205  Q
    ||||||| |||||||||||||||    
T  4988047 tcaaagataacacaaaaaactat 4988069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 83 - 205
Target Start/End: Original strand, 16524384 - 16524505
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| | ||||||||||  ||| | ||||||||| || |||| |||   |||||||||||||||||||||||||| |||||||||| ||    
T  16524384 aaaattaaatgcaaagtgcattcaatttgttctct-tttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatt 16524482  T
Q  183 tcaaagaaaacacaaaaaactat 205  Q
    ||||||| |||||||||||||||    
T  16524483 tcaaagataacacaaaaaactat 16524505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 73 - 151
Target Start/End: Original strand, 9428766 - 9428844
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaa 151  Q
    |||||||||||||||| ||||||||||| ||| |||||||||| ||||| |||||||| ||||||||||||||||||||    
T  9428766 ttattctcataaaatttaatgcaaattatatttaattttctctctcttttattttttctataaccaatagccaatgaaa 9428844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 87 - 205
Target Start/End: Complemental strand, 16013583 - 16013465
Alignment:
Q  87 ttaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaa 186  Q
    ||||||| ||| | |||||||||| |||| | ||||||||| || |||| |||   |||||||||||||||||||||||||| |||||||||| ||||||    
T  16013583 ttaaatgaaaaatgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatttcaa 16013484  T
Q  187 agaaaacacaaaaaactat 205  Q
    ||| || ||||||||||||    
T  16013483 agataatacaaaaaactat 16013465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 83 - 205
Target Start/End: Original strand, 3888431 - 3888553
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| | ||||||||||  ||| | ||||||||| || |||| |||   || ||||||||||||| ||||||||| |||||||||| ||    
T  3888431 aaaattaaatgcaaagtgcattcaatttgttctctttttcattttctctataatcaactacccatgaaaattgtttctacatcttcctataaaacttatt 3888530  T
Q  183 tcaaagaaaacacaaaaaactat 205  Q
    ||||| | |||||||| ||||||    
T  3888531 tcaaatataacacaaataactat 3888553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 14573293 - 14573136
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttct-ctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttctta 171  Q
    |||| ||||| |||||||||  |||||| ||| |||||| | || |||  |||||| ||||||| ||| |  ||||||||||| |||||||||| ||  |    
T  14573293 ttatactcatgaaattaaatttaaattatattaaatttttttctctctaccattttctccataatcaacaaacaatgaaaattatttttacatcatccca 14573194  T
Q  172 taaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||| |||| |||||||||||| || ||||| |||||||||||||| ||| |||||||||    
T  14573193 taatacttatttcaaagaaaatac-aaaaattatactccaaattcatatattttagttt 14573136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 207
Target Start/End: Original strand, 17598294 - 17598419
Alignment:
Q  82 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 181  Q
    |||||||||||||||||| ||||||||||  ||| | ||| ||||| |||||||    || ||||||| |||| ||||||||||||   |||||| || |    
T  17598294 taaaattaaatgcaaattgcattcaatttattctcttttttattttctccataatttttaaccaatgagaattatttttacatctttccataaaatttat 17598393  T
Q  182 ttcaaagaaaacacaaaaaactatac 207  Q
    | |||||| ||||||||||| |||||    
T  17598394 tccaaagagaacacaaaaaattatac 17598419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 9428846 - 9428898
Alignment:
Q  178 ttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||||| ||| ||||||||||||| |||||| |||||||||||||||||||||    
T  9428846 tttttttaaaaaaaacacaaaaaattatacttcaaattcttatgttttagttt 9428898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 82 - 206
Target Start/End: Original strand, 21963958 - 21964082
Alignment:
Q  82 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 181  Q
    |||||||||||| ||||| ||| ||||||  ||| | ||| ||||| ||||| | ||||| ||||| |||||| ||||||||||||   ||||||||| |    
T  21963958 taaaattaaatgtaaatttcatacaatttgttctcttttttattttctccatgatcaataaccaataaaaattatttttacatctttccataaaacttat 21964057  T
Q  182 ttcaaagaaaacacaaaaaactata 206  Q
    || || || ||||||||||| ||||    
T  21964058 tttaaggagaacacaaaaaattata 21964082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 179
Target Start/End: Complemental strand, 5300701 - 5300659
Alignment:
Q  137 caatagccaatgaaaattgtttttacatcttcttataaaactt 179  Q
    ||||| |||||||||||||||||||||||||| ||||||||||    
T  5300701 caataaccaatgaaaattgtttttacatcttcctataaaactt 5300659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 202
Target Start/End: Complemental strand, 16870947 - 16870828
Alignment:
Q  84 aaattaaatgcaaattacattcaattttctctttctttcattttttccataac-caatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    |||||||||| |||||||||||| ||| ||||  |||||||||| |  |||||  |||| ||||| ||| ||| ||||| |||||  ||| |||||| ||    
T  16870947 aaattaaatgaaaattacattcattttgctctccctttcattttctttataactaaataaccaataaaagttgattttaaatctttctatgaaacttatt 16870848  T
Q  183 tcaaagaaaacacaaaaaac 202  Q
    | ||||| ||||||||||||    
T  16870847 ttaaagataacacaaaaaac 16870828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 230
Target Start/End: Original strand, 15830760 - 15830846
Alignment:
Q  144 caatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| | ||||||||||| |||  |  ||| | ||||||||||||||    
T  15830760 caatgaaaattttttttacatcttcctattaaacttattttaaaaataacacaaaaaattatgttagaaactattatgttttagttt 15830846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 230
Target Start/End: Complemental strand, 5822123 - 5822042
Alignment:
Q  149 aaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||||||||||||||||||  ||| |||||| || |||||| ||||||| ||| |||||| |||| | | || |||||||||    
T  5822123 aaaattgtttttacatctttctatgaaacttattccaaagataacacaagaaattatactacaaactataatattttagttt 5822042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 230
Target Start/End: Complemental strand, 5881872 - 5881760
Alignment:
Q  118 ctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattct 217  Q
    |||||||||| || ||||  |||| ||||| |||||||||||||||||||  ||| ||||||  | |||||| |||| || ||| |||||| |||| | |    
T  5881872 ctttcattttctctataattaataaccaattaaaattgtttttacatctttctatgaaacttagtccaaagataacagaagaaattatactgcaaactat 5881773  T
Q  218 tatgttttagttt 230  Q
     || |||||||||    
T  5881772 aatattttagttt 5881760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 14709899 - 14709795
Alignment:
Q  123 attttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaac-acaaaaaactatactccaaattcttatg 221  Q
    ||||| ||||||| ||||| |||||||||||| ||||||| | ||||| | |||||| ||||||  | ||| | |||||| ||| | ||||||| |||||    
T  14709899 attttctccataatcaataaccaatgaaaattatttttactttttcttgtgaaacttatttcaagtagaacaaaaaaaaaatattcaccaaattattatg 14709800  T
Q  222 tttta 226  Q
    |||||    
T  14709799 tttta 14709795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 169
Target Start/End: Complemental strand, 26540341 - 26540253
Alignment:
Q  81 ataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttct 169  Q
    |||||||||||||||||||  ||||||||| | || ||| | ||||| |||||| | ||||  |||| |||||||||| ||| ||||||    
T  26540341 ataaaattaaatgcaaattgtattcaatttacactctctctgattttctccatatcaaataatcaataaaaattgtttatacttcttct 26540253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 156; Significance: 7e-83; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 21 - 230
Target Start/End: Complemental strand, 791 - 581
Alignment:
Q  21 ccaaaatataagcaaaaaagacaaacttttatcttttccaa-annnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttct 119  Q
    ||||||||||||||||||| ||||||||||||||||||||| |         |||||||||||||||||||||||||||||||||||||||| |||||||    
T  791 ccaaaatataagcaaaaaacacaaacttttatcttttccaagatttttttttgttattctcataaaattaaatgcaaattacattcaattttatctttct 692  T
Q  120 ttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattctta 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  691 ttcattttttccataaccaatagccaatgaaaattgtttttacatctccctataaaacttttttcaaagaaaacacataaaactatactccaaattctta 592  T
Q  220 tgttttagttt 230  Q
    |||||||||||    
T  591 tgttttagttt 581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 156; Significance: 7e-83; HSPs: 91)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 18 - 230
Target Start/End: Complemental strand, 32624227 - 32624013
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaa-annnnnnnnngtt-attctcataaaattaaatgcaaattacattcaattttctct 115  Q
    |||||||||||||||||||||||||||||||||||||||||||| |         ||| |||||||||||||||||||||||||||||||||||||||||    
T  32624227 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaagatttttttttgtttattctcataaaattaaatgcaaattacattcaattttctct 32624128  T
Q  116 ttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaatt 215  Q
     |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  32624127 ctctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactacactccaaatt 32624028  T
Q  216 cttatgttttagttt 230  Q
    |||||||||||||||    
T  32624027 cttatgttttagttt 32624013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 18 - 226
Target Start/End: Complemental strand, 39555807 - 39555598
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnngtt-attctcataaaattaaatgcaaattacattcaattttctctt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||          ||| |||||||||||||||||||||||||||||||||| ||||||     
T  39555807 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaagattttttttgtttattctcataaaattaaatgcaaattacattcaatgttctctc 39555708  T
Q  117 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||    
T  39555707 tctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctataaaacttttttcaaagaaaacacaaaaacctatactccaaattc 39555608  T
Q  217 ttatgtttta 226  Q
    ||||||||||    
T  39555607 ttatgtttta 39555598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 18 - 220
Target Start/End: Complemental strand, 12449188 - 12448985
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnngtt-attctcataaaattaaatgcaaattacattcaattttctctt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||          ||| |||||||||||||||||||||||||||||||||||||||||     
T  12449188 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaagattttttttgtttattctcataaaattaaatgcaaattacattcaattttctctc 12449089  T
Q  117 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 216  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  12449088 tctttgattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 12448989  T
Q  217 ttat 220  Q
    ||||    
T  12448988 ttat 12448985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 21 - 230
Target Start/End: Original strand, 24190414 - 24190622
Alignment:
Q  21 ccaaaatataagcaaaaaagacaaacttttatcttttccaa-annnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttct 119  Q
    |||||||||||| |||||||||||||||||||||||||||| |         ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  24190414 ccaaaatataag-aaaaaagacaaacttttatcttttccaagatttttttttgttattctcataaaattaaatgcaaattacatt-aattttctctttct 24190511  T
Q  120 ttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattctta 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24190512 ttcattttttccataaccaatagccaatgaaaattgtttttacatctccgtataaaactttttccaaagaaaacacaaaaaactatactccaaattctta 24190611  T
Q  220 tgttttagttt 230  Q
    |||||||||||    
T  24190612 tgttttagttt 24190622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 15959805 - 15959648
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||    
T  15959805 ttattctcataaaattaaatgcaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 15959706  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15959705 aaaacttttttcaaagaaaacacaaaaaattatactccaaattcttatgttttagttt 15959648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 75 - 230
Target Start/End: Original strand, 2126036 - 2126191
Alignment:
Q  75 attctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataa 174  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  2126036 attctcattaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataa 2126135  T
Q  175 aacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  2126136 aactttttccaaagaaaacacaaaaaactatattccaaattcttatgttttagttt 2126191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 72 - 230
Target Start/End: Original strand, 35691387 - 35691546
Alignment:
Q  72 gttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttt-ttccataaccaatagccaatgaaaattgtttttacatcttctt 170  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| | |    
T  35691387 gttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttttttccataaccaatagccaataaaaattgtttttacatctccct 35691486  T
Q  171 ataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  35691487 ataaaacttttttcaaagaaaacacaaaaaattatactccaaattcttatgttttagttt 35691546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 6785452 - 6785608
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  6785452 ttattctcataaaattaaatgcaaactacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcatat 6785551  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||    
T  6785552 aaaactttttcaaaagaaaacacaaaaaactatactcc-aattcttatgttttagttt 6785608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 6786834 - 6786991
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||    
T  6786834 ttattctcataaaattaaatgcaaactacattcaattttcactctctttcattttttccataaccaatagccaatgaaaattgtgtttacatcttcatat 6786933  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  6786934 aaaactttttccaaagaaaacacaaaaaactatactccaaattctcatgttttagttt 6786991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 40718674 - 40718831
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||| |||| |||    
T  40718674 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttctattaccaatagccaatgaaaattgtttctacaacttcatat 40718773  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  40718774 aaaacttttttcaaagaaaacacaaaaaactatactccaaatttttatattttagttt 40718831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 33369549 - 33369703
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  33369549 ttattctcataaaattaaatgcaaattacattcaattttctct--ctttcattttttccataaccaatagccaatgaaaattgtttttacatct-catat 33369645  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  33369646 aaaactttttccaaagaaaacacaaaaaactatactccaaatttttatgttttagttt 33369703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 22 - 222
Target Start/End: Complemental strand, 43667517 - 43667319
Alignment:
Q  22 caaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttcttt 121  Q
    |||||||||||||||||||||||||||||||||||| |||           ||||||||||||||||||||| |||||||||||||||||||||  ||||    
T  43667517 caaaatataagcaaaaaagacaaacttttatctttttcaagatttttttgtttattctcataaaattaaatgtaaattacattcaattttctct--cttt 43667420  T
Q  122 cattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatg 221  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||  |||||||||||    
T  43667419 cattttttccataaccaatggccaatgaaaattgtttttacgtcttcctataaaacttttttcaaagaaaacacaaaaaattatactttaaattcttatg 43667320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 19 - 230
Target Start/End: Complemental strand, 32983390 - 32983180
Alignment:
Q  19 tcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnngtt-attctcataaaattaaatgcaaattacattcaattttctcttt 117  Q
    ||||||||||||||||||||||||||| |||||||||||  ||          ||| |||||||||||||||||||||||||| |||||||||||||| |    
T  32983390 tcccaaaatataagcaaaaaagacaaatttttatcttttttaagaatttttttgtttattctcataaaattaaatgcaaattatattcaattttctctct 32983291  T
Q  118 ctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattct 217  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| | |||| |    
T  32983290 ctttcattttttccataaccaat-gccaatgaaaattgtttttacatcttcttataaaac-ttttccaaagaaaacacaaaaaactatacttccaatttt 32983193  T
Q  218 tatgttttagttt 230  Q
    |||||||||||||    
T  32983192 tatgttttagttt 32983180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 45226134 - 45226291
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||    
T  45226134 ttattctcataaaattaaatgcaaattacattcaattttctatctctttcattttttccataaccaatagtcaatgaaaattgtttttacgtcttcctat 45226233  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||||||||||||||||||| ||| |||||||||||| ||||| ||||||||||||||    
T  45226234 aaaacttttttcaaagaaaatacataaaactatactctaaattattatgttttagttt 45226291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 18 - 230
Target Start/End: Complemental strand, 42966034 - 42965824
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctcttt 117  Q
    ||||||||||| ||| ||||||||||||||||||| |||| |||           ||||||| ||||||||||||||||||||||||||||||||||| |    
T  42966034 gtcccaaaatacaagtaaaaaagacaaacttttatttttttcaagatttttttgtttattcttataaaattaaatgcaaattacattcaattttctctct 42965935  T
Q  118 ctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattct 217  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||| ||| |||||| |    
T  42965934 ctttcattttt-ccataaccaatagccaatgaaaattgtttttacatcttcctataaaa-tttttccaaagaaaacacaaaaaactaaacttcaaatttt 42965837  T
Q  218 tatgttttagttt 230  Q
    |||||||||||||    
T  42965836 tatgttttagttt 42965824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 28016909 - 28016754
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||||||||||||||||| ||||||||||||||||||  |||| |||||||  ||||||||||||||||||||||||||||||||||||| |||    
T  28016909 ttattctcataaaattaaatgcaagttacattcaattttctct--cttttattttttttataaccaatagccaatgaaaattgtttttacatcttcctat 28016812  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  28016811 aaaacatttttcaaagaaaacaccaaaaactatactctaaattcttatgttttagttt 28016754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 39932737 - 39932580
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||| ||||| ||||| ||||||||||||| ||||||||||||| ||||||||||    
T  39932737 ttattctcataaaattaaatacaaattacattcaattttctctctcttttattttctccatgaccaatagccaataaaaattgtttttatatcttcttat 39932638  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||| ||  ||| ||||||||||||||||||||||||||||||||||||||||||    
T  39932637 aaaacttattaaaaaaaaaacacaaaaaactatactccaaattcttatgttttagttt 39932580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 23 - 230
Target Start/End: Complemental strand, 28120970 - 28120763
Alignment:
Q  23 aaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctttc 122  Q
    |||||||||| ||||||||||||||||||||||||| | |          |||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  28120970 aaaatataagtaaaaaagacaaacttttatcttttcaagatttcttttgtttattcacataaaattaaatgcaaattacattcaattttctctctctttc 28120871  T
Q  123 attttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgt 222  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||  |||||| |  ||| ||| ||||||||||||||||||||||| |||||||| |    
T  28120870 attttttccataatcaatagccaatgaaaattgtttttacatcttcccataaaattcattttaaaaaaaacacaaaaaactatactccacattcttattt 28120771  T
Q  223 tttagttt 230  Q
     |||||||    
T  28120770 cttagttt 28120763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 47014655 - 47014501
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||    
T  47014655 ttattctcataaaattaaatgtaaat-acattcaattttctctctctttcattttttccataaccaatagtcaatgaaaattgtttttacattttcctat 47014557  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||||||||||||| |||||||||||||||  ||||||| ||||||||||||||||||    
T  47014556 aaaacttttttcaacgaaaacacaaaaaac--tactccagattcttatgttttagttt 47014501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 46542980 - 46543135
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||||||||||||||||||| |||| ||||||||||  |||||||||| |||| ||||||||||||||| ||||||||||| ||||||| |||    
T  46542980 ttattctcataaaattaaatgcaaattgcatttaattttctct--ctttcattttctccacaaccaatagccaatggaaattgttttttcatcttcctat 46543077  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  46543078 aaattttttttcaaagaaaacacaaaaaactatactccaaatttttatgttttagttt 46543135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 7468128 - 7467970
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||  | ||| |||||||||||||||||||| ||||||||||| | |    
T  7468128 ttattctcataaaattaaatgcaaattacattcaattttctatctctttcatttttctcttaatcaatagccaatgaaaattgtatttacatcttccttt 7468029  T
Q  173 aaaacttttttcaaagaaaacacaaaaaacta-tactccaaattcttatgttttagttt 230  Q
    |||||||||| |||||||||||||||||| || |||| |||||||||||||||||||||    
T  7468028 aaaactttttccaaagaaaacacaaaaaattattacttcaaattcttatgttttagttt 7467970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 81 - 226
Target Start/End: Complemental strand, 13136708 - 13136566
Alignment:
Q  81 ataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttt 180  Q
    |||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||  |||    
T  13136708 ataaaattaaatgcaaattatattcaattttctct--ctttcattttttccataaccaatagccaatggaaattgtttttacatcttcctat-aattttt 13136612  T
Q  181 tttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 226  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||    
T  13136611 ttttaaagaaaacacaaaaaactatactccaaattcttatgtttta 13136566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 1820411 - 1820568
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||| ||| |||||| ||| ||||||||||||| |||    
T  1820411 ttattctcataaaattaaatgcaaattacattcaattttttctctctttcatttttttcataaccaaaagctaatgaatatt-tttttacatcttcctat 1820509  T
Q  173 aaaacttttttcaaagaaaacacaa-aaaactatactccaaattcttatgttttagttt 230  Q
    |||||||||| |||| ||| ||||| ||||||||| |||||||||||||||||||||||    
T  1820510 aaaactttttccaaaaaaagcacaataaaactatattccaaattcttatgttttagttt 1820568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 73 - 226
Target Start/End: Complemental strand, 47600204 - 47600048
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||    
T  47600204 ttattctcataaaattaaatgcaaattacattcaattttctttctctttcatttttttcataaacaatagccaatgaaaattgtttttacatcttcctat 47600105  T
Q  173 aaaactt-ttttcaaaga--aaacacaaaaaactatactccaaattcttatgtttta 226  Q
    ||||||| ||||  ||||  | ||| |||||||||||||| ||||||||||||||||    
T  47600104 aaaactttttttttaagattacacaaaaaaaactatactctaaattcttatgtttta 47600048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 73 - 225
Target Start/End: Complemental strand, 46818667 - 46818515
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||||||||||||| |||||||| |||| ||||||||   ||||||||| |||||||| | |||||||||||||||||||||| |||||| |||    
T  46818667 ttattctcataaaattaaatacaaattacgttcagttttctctcaatttcattttctccataactattagccaatgaaaattgtttttatatcttcctat 46818568  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttt 225  Q
    |||||||||||||||||||| |||||||||||||||  |||||||||||||||    
T  46818567 aaaacttttttcaaagaaaatacaaaaaactatactttaaattcttatgtttt 46818515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 73 - 226
Target Start/End: Complemental strand, 2246179 - 2246026
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||| || |||  ||| ||| ||||||||||||||||| ||||||||| ||| |||    
T  2246179 ttattctcataaaattaaatgcaaattacatttaattttctctctcttccactttccccacaacgaatagccaatgaaaattctttttacatattcctat 2246080  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 226  Q
    ||||||| ||||||||||||||||||||||||||||| ||||| | ||||||||    
T  2246079 aaaacttatttcaaagaaaacacaaaaaactatactctaaattttaatgtttta 2246026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 73 - 226
Target Start/End: Original strand, 3076291 - 3076444
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||| ||||||||||||||||||||| ||||||||||  |||| |||||||||||||||||| ||||||||||||| |||||||||||||  ||    
T  3076291 ttattctcatgaaattaaatgcaaattacatttaattttctctcacttttattttttccataaccaattgccaatgaaaattatttttacatcttcccat 3076390  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 226  Q
    ||||||| || |||| ||||||||||||||||| || |||||||||||| ||||    
T  3076391 aaaacttattccaaataaaacacaaaaaactatgctacaaattcttatgcttta 3076444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 73 - 226
Target Start/End: Complemental strand, 3875186 - 3875031
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataacca----atagccaatgaaaattgtttttacatcttc 168  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    ||||||||| |||||||||||||||| |||    
T  3875186 ttattctcataaaattaaatgcaaatttcattcaattttctctctctttcattttttccataaccaatatatagccaataaaaattgtttttacatattc 3875087  T
Q  169 ttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 226  Q
     |||||||||||||  ||| |||||||  ||||||||||| |||||||||||||||||    
T  3875086 ctataaaactttttcaaaaaaaaacac--aaaactatacttcaaattcttatgtttta 3875031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 11241073 - 11241176
Alignment:
Q  123 attttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgt 222  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  11241073 attttttccataaccaatagccaatgaaaattggttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgt 11241172  T
Q  223 ttta 226  Q
    ||||    
T  11241173 ttta 11241176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 24728792 - 24728634
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||| | ||||||||||||||||||||| |||||||||| ||||| ||||||||||||| |||| |||||||||||||||||||||||||||  ||    
T  24728792 ttattctcgtgaaattaaatgcaaattacatttaattttctctctcttttattttttccataatcaattgccaatgaaaattgtttttacatcttcccat 24728693  T
Q  173 aaaacttttttcaaagaaaacacaa-aaaactatactccaaattcttatgttttagttt 230  Q
     |||||| ||  ||||||||||||| |||||||| || |||||||||||||||||||||    
T  24728692 gaaacttattcgaaagaaaacacaaaaaaactatgctacaaattcttatgttttagttt 24728634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 33431557 - 33431712
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||||||| |||| ||||||||||| ||||||||||  |||||||||| || ||||||||||||||||||||||||||||| |||| || |||    
T  33431557 ttattctcataaaatgaaatacaaattacatttaattttctct--ctttcattttctctataaccaatagccaatgaaaattgtttttccatcctcctat 33431654  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||||||| ||| ||||||||||||||||| || |||||||||||| | ||||||    
T  33431655 aaaacttttttaaaaaaaaacacaaaaaactatgctacaaattcttatgatctagttt 33431712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 44148997 - 44148844
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||| |||||||||||||||||| || ||||||||||  |||  |||||||||||||||||| |||||||||||||||||||||||||||  ||    
T  44148997 ttattctcatgaaattaaatgcaaattacgtttaattttctct--ctt--attttttccataaccaattgccaatgaaaattgtttttacatcttcccat 44148902  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
     |||||| || |||||||||||||||||||||| || |||||||||||| ||||||||    
T  44148901 gaaacttattccaaagaaaacacaaaaaactatgctacaaattcttatgctttagttt 44148844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 73 - 226
Target Start/End: Complemental strand, 37735548 - 37735395
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||| ||| |||||||||||||||||||||||||||||||| | || |||||| ||||||| ||||||||||| |||||||||||||| |||||  ||    
T  37735548 ttattcacatgaaattaaatgcaaattacattcaattttctctcttttccattttctccataatcaatagccaataaaaattgtttttacttcttcccat 37735449  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 226  Q
     |||||| || ||||||||| ||||||||||||||| || ||||||||||||||    
T  37735448 gaaacttattccaaagaaaatacaaaaaactatacttcagattcttatgtttta 37735395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 98 - 230
Target Start/End: Complemental strand, 32742342 - 32742210
Alignment:
Q  98 ttacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaa 197  Q
    ||||||| |||||||||||||||||||||||||||||| ||||    ||||||||||||||||| || || ||||||||||||||| |||||||||||||    
T  32742342 ttacatttaattttctctttctttcattttttccataatcaatgattaatgaaaattgtttttatatttttttataaaactttttttaaagaaaacacaa 32742243  T
Q  198 aaaactatactccaaattcttatgttttagttt 230  Q
    |||||||||||| ||||||||||| ||||||||    
T  32742242 aaaactatactcaaaattcttatgctttagttt 32742210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 76 - 187
Target Start/End: Original strand, 16854139 - 16854250
Alignment:
Q  76 ttctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaa 175  Q
    ||||||||||||||||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||||||| ||||||||||||||| ||||  |||||    
T  16854139 ttctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaataaaaattgtttttacaccttccaataaa 16854238  T
Q  176 acttttttcaaa 187  Q
    ||||||||||||    
T  16854239 acttttttcaaa 16854250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 3861858 - 3861703
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||| |||||||||||||||||||| ||| |||||| |||  |||||||||||| ||||| |||||||||||||||||||||||||||||||   ||    
T  3861858 ttattcttataaaattaaatgcaaattatatttaatttt-tctc-ctttcatttttttcataatcaatagccaatgaaaattgtttttacatctttcaat 3861761  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||| ||  |||||||||| |||||| |||||| |||||| ||||||||||||||    
T  3861760 aaaacttattctaaagaaaacataaaaaattatacttcaaattattatgttttagttt 3861703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 73 - 187
Target Start/End: Original strand, 50369954 - 50370071
Alignment:
Q  73 ttattctcataaaattaaatgcaaatta----cattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttc 168  Q
    |||||||||||||||||||| |||||||    ||||||||||||||| |||||||||||||| ||||||||||||||||  |||||||||||||||||||    
T  50369954 ttattctcataaaattaaatacaaattaattacattcaattttctctctctttcattttttc-ataaccaatagccaatagaaattgtttttacatcttc 50370052  T
Q  169 ttataaaacttttttcaaa 187  Q
     ||||||||||||||||||    
T  50370053 ctataaaacttttttcaaa 50370071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 74 - 198
Target Start/End: Complemental strand, 10558920 - 10558796
Alignment:
Q  74 tattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttata 173  Q
    ||||||||| |||||||||| |||||||||| |||||| ||| |||| |||||| ||||||| ||||||||||||||||||||||||||||||||  |||    
T  10558920 tattctcatgaaattaaatgtaaattacattaaattttttctctcttccattttctccataatcaatagccaatgaaaattgtttttacatcttcccata 10558821  T
Q  174 aaacttttttcaaagaaaacacaaa 198  Q
    ||| || || |||||||||||||||    
T  10558820 aaaattattccaaagaaaacacaaa 10558796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 73 - 220
Target Start/End: Original strand, 25391680 - 25391824
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||||||||||||||||||||||||||||||| | | |||| || || | ||||||| | ||||||||||||||||||||||||| ||| |||    
T  25391680 ttattctcataaaattaaatgcaaattacattcaatttt-tatctcttccacttct-ccataactattagccaatgaaaattgtttttacattttcatat 25391777  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttat 220  Q
    ||||||| | | ||||||||||||||||| |||||| |||||||||||    
T  25391778 aaaacttatct-aaagaaaacacaaaaaattatacttcaaattcttat 25391824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 205
Target Start/End: Complemental strand, 5858526 - 5858404
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| | |||||||||| |||| | ||||||||| || |||||||||||||||||||||||||||||| |||||| |||||||||| ||    
T  5858526 aaaattaaatgcaaagtgcattcaatttgctctctgtttcattttctcaataaccaatagccaatgaaaattgtttttatatcttcctataaaacttatt 5858427  T
Q  183 tcaaagaaaacacaaaaaactat 205  Q
    |||| || ||||||| |||||||    
T  5858426 tcaaggataacacaagaaactat 5858404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 73 - 178
Target Start/End: Complemental strand, 6787154 - 6787050
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||| ||||| |||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||    
T  6787154 ttattctcgtaaaaataaatgcaaactacattcaattt-ctctctctttcattttttccataaccaatagccaataaaaattatttttacatcttcctat 6787056  T
Q  173 aaaact 178  Q
    ||||||    
T  6787055 aaaact 6787050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 73 - 193
Target Start/End: Complemental strand, 23392330 - 23392211
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||| ||||||||||| |||||| || ||  |||    
T  23392330 ttattctcatgaaattaaatgcaaattacatt-aattttctctttcttccattttctccataaccaatagtcaatgaaaattatttttatatttttctat 23392232  T
Q  173 aaaacttttttcaaagaaaac 193  Q
    ||||||| || ||||||||||    
T  23392231 aaaacttattccaaagaaaac 23392211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 73 - 220
Target Start/End: Original strand, 43765290 - 43765438
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||  |||||| |||||||||| |||||||||||| | |||| |||||| | |||||| |||| |||||||||| ||||||||||||||| |||    
T  43765290 ttattctcacgaaattagatgcaaattaaattcaattttctttctcttccattttctgcataacaaataaccaatgaaaaatgtttttacatcttcctat 43765389  T
Q  173 aaaacttttttcaaagaaaacac-aaaaaactatactccaaattcttat 220  Q
    ||||||| ||  ||||||||||| ||||||||||||| |||||| ||||    
T  43765390 aaaacttattctaaagaaaacacaaaaaaactatactacaaatttttat 43765438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 123 - 230
Target Start/End: Original strand, 52984979 - 52985086
Alignment:
Q  123 attttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgt 222  Q
    ||||| ||| ||| ||||||||||||||||||||||||||||||||   | |||||| || |||||||||||||||||||||||||||||||||||||||    
T  52984979 attttatccctaatcaatagccaatgaaaattgtttttacatcttcccgtgaaacttattccaaagaaaacacaaaaaactatactccaaattcttatgt 52985078  T
Q  223 tttagttt 230  Q
     |||||||    
T  52985079 attagttt 52985086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 83 - 205
Target Start/End: Original strand, 5950445 - 5950567
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||| ||| | |||| ||||| |||| |||||||||||||| |||||||||  |||||||||||||||||||||||||| |||||||||| ||    
T  5950445 aaaattaaatgtaaagtgcatttaatttgctctctctttcattttttcaataaccaatgaccaatgaaaattgtttttacatcttcctataaaacttatt 5950544  T
Q  183 tcaaagaaaacacaaaaaactat 205  Q
    |||| || ||||||| |||||||    
T  5950545 tcaaggataacacaagaaactat 5950567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 83 - 205
Target Start/End: Original strand, 7397712 - 7397834
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| | |||||||||| |||||| ||||||||| || |||| |||   |||||||||||||||||||||||||| ||||||| || ||    
T  7397712 aaaattaaatgcaaagtgcattcaatttgctctttttttcattttctctataatcaaataccaatgaaaattgtttttacatcttcctataaaatttatt 7397811  T
Q  183 tcaaagaaaacacaaaaaactat 205  Q
    ||||||| |||||||||||||||    
T  7397812 tcaaagataacacaaaaaactat 7397834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 89 - 226
Target Start/End: Complemental strand, 7876091 - 7875952
Alignment:
Q  89 aaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat--aaaacttttttcaa 186  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||| |||||| ||||||||||||  |||  ||||     |||||    
T  7876091 aaatgcaaattacattcaattttctctctcttttattttttccataaccaatagtcaataaaaattatttttacatctttctataaaaaaaaaaattcaa 7875992  T
Q  187 agaaaacacaaaaaactatactccaaattcttatgtttta 226  Q
    |||||||||||||||||||| | |||||| |||| |||||    
T  7875991 agaaaacacaaaaaactataattcaaatttttatatttta 7875952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 47303071 - 47302916
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttct-ctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttctta 171  Q
    |||||||||| ||||||||||||||||||||||| ||||||  ||| ||||||||| | ||||| ||||||||||||||||||  |||||||||||| ||    
T  47303071 ttattctcatgaaattaaatgcaaattacattcagttttctattttttttcattttctacataatcaatagccaatgaaaatt-attttacatcttccta 47302973  T
Q  172 taaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    | |||||| || | || |||||||  |||| |||||||||| ||||||| |||||||||    
T  47302972 tgaaacttattcctaaaaaaacac--aaaattatactccaatttcttatattttagttt 47302916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 73 - 226
Target Start/End: Original strand, 1034854 - 1035004
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||| ||||||||||| |||||||||||||||| | | || |  ||||| ||  |||||||||| | |||||||||||||||| ||||||| ||    
T  1034854 ttattctcatgaaattaaatgcgaattacattcaatttttt-tctcatctattttctctgtaaccaatagtcgatgaaaattgtttttatatcttctcat 1034952  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 226  Q
    ||||||| || ||||||||||||  ||||| |||| ||||||||||||||||||    
T  1034953 aaaacttattccaaagaaaacac--aaaacaatacgccaaattcttatgtttta 1035004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 205
Target Start/End: Original strand, 16688142 - 16688264
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| | |||| ||| | || ||||||||||||| || |||||||| | |||||||||||||||||||||||||| |||||||||| ||    
T  16688142 aaaattaaatgcaaagttcatttaatatgctttttctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaacttatt 16688241  T
Q  183 tcaaagaaaacacaaaaaactat 205  Q
    ||||| | |||| ||||||||||    
T  16688242 tcaaaaataacataaaaaactat 16688264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 30221771 - 30221874
Alignment:
Q  123 attttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgt 222  Q
    ||||| ||||||||||||| ||||| |||| |||||||||||||||  ||||||||| ||| ||||||||||||||||| |||| ||||| |||||||||    
T  30221771 attttctccataaccaatatccaataaaaaatgtttttacatcttcccataaaacttattttaaagaaaacacaaaaaattatattccaagttcttatgt 30221870  T
Q  223 ttta 226  Q
    ||||    
T  30221871 ttta 30221874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 230
Target Start/End: Complemental strand, 45840220 - 45840074
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| | |||||||||| |||| | |||||||||||| |||| |||   |||||||||||||||||| ||||||| |||||||| | ||    
T  45840220 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttttctataatcaactaccaatgaaaattgttttt-catcttcctataaaacatatt 45840122  T
Q  183 tcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||| | |||||||||||||||  | |||| | ||||||||||||||    
T  45840121 tcaaaaataacacaaaaaactatgttacaaactattatgttttagttt 45840074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 83 - 205
Target Start/End: Original strand, 37538815 - 37538937
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    |||||||| |||||| | |||||||||| |||  ||||||||||| || |||||||| | |||||||||||||| ||||||||||| |||||||||| ||    
T  37538815 aaaattaactgcaaagtgcattcaatttgctccctctttcattttctcgataaccaacaaccaatgaaaattgtctttacatcttcctataaaacttatt 37538914  T
Q  183 tcaaagaaaacacaaaaaactat 205  Q
    |||| || ||||||| |||||||    
T  37538915 tcaaggataacacaagaaactat 37538937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 169 - 230
Target Start/End: Original strand, 4672923 - 4672984
Alignment:
Q  169 ttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  4672923 ttataaaacttttttcaaagaaaatacaaaaaactatactccaaattcttatattttagttt 4672984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 83 - 206
Target Start/End: Complemental strand, 8889845 - 8889729
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||| ||| | ||||||||||||||| ||||||||||| || |||||||||       ||||||||||||||||||||| |||||||||| ||    
T  8889845 aaaattaaatgtaaagtgcattcaattttctctctctttcattttctcaataaccaat-------gaaaattgtttttacatcttcctataaaacttatt 8889753  T
Q  183 tcaaagaaaacacaaaaaactata 206  Q
    |||| || ||||||| ||||||||    
T  8889752 tcaaggataacacaataaactata 8889729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 111 - 226
Target Start/End: Complemental strand, 32318687 - 32318571
Alignment:
Q  111 tctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactt-ttttcaaagaaaacacaaaaaactatactc 209  Q
    ||||| ||| ||||||| ||||||||||||| ||||||||||||||||||||||||||  ||||||||| |||  ||| |||| | |||||| |||||||    
T  32318687 tctctctctctcattttctccataaccaataaccaatgaaaattgtttttacatcttccaataaaacttatttaaaaacaaaaaagaaaaaattatactc 32318588  T
Q  210 caaattcttatgtttta 226  Q
    |||||| |||| |||||    
T  32318587 caaatttttatatttta 32318571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 73 - 226
Target Start/End: Original strand, 50012587 - 50012727
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||| ||||||||||||||||||||||||||||||||| | ||||| |||||||| ||||| |||| |||||||||||| |||||| || ||| |||    
T  50012587 ttattcttataaaattaaatgcaaattacattcaattttctttctcttttattttttctataactaata-ccaatgaaaattatttttatatattcctat 50012685  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 226  Q
     ||            ||||||||||||||||||||||||||||| ||| |||||    
T  50012686 gaa------------gaaaacacaaaaaactatactccaaattcctatatttta 50012727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 95 - 230
Target Start/End: Complemental strand, 298812 - 298676
Alignment:
Q  95 aaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaaca 194  Q
    |||||||||| ||||||||||||||| |||||| ||||||| ||||||||||| |||||  |||||||||||||  || |||||| ||  ||||||||||    
T  298812 aaattacatttaattttctctttcttccattttctccataatcaatagccaattaaaataatttttacatcttcccat-aaacttattctaaagaaaaca 298714  T
Q  195 caaaaaactatactccaaat--tcttatgttttagttt 230  Q
    ||  |||||||||| ||| |  | ||||||||||||||    
T  298713 catcaaactatacttcaagttattttatgttttagttt 298676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 83 - 201
Target Start/End: Complemental strand, 25185459 - 25185341
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| | ||||||||||  ||| | ||||||||| || |||| |||   ||||||||| ||||||| |||||||| |||||||||| ||    
T  25185459 aaaattaaatgcaaagtgcattcaatttgttctctttttcattttctctataatcaactaccaatgaaagttgttttcacatcttcctataaaacttatt 25185360  T
Q  183 tcaaagaaaacacaaaaaa 201  Q
    ||||||| |||||||||||    
T  25185359 tcaaagataacacaaaaaa 25185341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 83 - 205
Target Start/End: Complemental strand, 44510374 - 44510252
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| | |||||||||| ||||   ||||||||| || |||| ||||   |||||||||||||||||||| |||| ||||||| || ||    
T  44510374 aaaattaaatgcaaagtgcattcaatttgctctccttttcattttctctataatcaattatcaatgaaaattgtttttacaacttcctataaaatttatt 44510275  T
Q  183 tcaaagaaaacacaaaaaactat 205  Q
    ||||| | |||||||||||||||    
T  44510274 tcaaaaataacacaaaaaactat 44510252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 157
Target Start/End: Original strand, 14086966 - 14087030
Alignment:
Q  91 atgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtt 157  Q
    |||||||||||||||||||||||||  |||| |||||||||||||| ||||||||||||||||||||    
T  14086966 atgcaaattacattcaattttctct--cttttattttttccataactaatagccaatgaaaattgtt 14087030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 230
Target Start/End: Complemental strand, 30701524 - 30701393
Alignment:
Q  99 tacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaa 198  Q
    |||||||||||| |||| | ||||||||| || |||| |||   |||||||||||| |||| |||||||| |||||||||| ||||||||| ||||||||    
T  30701524 tacattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattattttcacatcttcctataaaacttatttcaaagataacacaaa 30701425  T
Q  199 aaactatactccaaattcttatgttttagttt 230  Q
    ||| |||  | |||| |  |||||||||||||    
T  30701424 aaattatgttacaaactactatgttttagttt 30701393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 230
Target Start/End: Complemental strand, 35366358 - 35366211
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    |||||||||| |||| | |||||||||| || | ||| ||||||  || |||||||||| ||||| |||||||||||||||||||  ||||||| || ||    
T  35366358 aaaattaaattcaaagtgcattcaatttgctatctctatcatttgatcaataaccaataaccaattaaaattgtttttacatctttctataaaatttatt 35366259  T
Q  183 tcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||| || ||||||| |||||||  | |||| |  |||||||||||||    
T  35366258 tcaacgataacacaagaaactatgttgcaaactactatgttttagttt 35366211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 84 - 230
Target Start/End: Complemental strand, 52841599 - 52841453
Alignment:
Q  84 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttttt 183  Q
    ||||||| |||||||| || ||| ||| ||||| ||||||||||  | ||||| |||| ||||||||||||||||| |||||||  ||| |||||| |||    
T  52841599 aaattaagtgcaaattgcaatcattttgctcttcctttcattttccctataactaataaccaatgaaaattgttttaacatctttctatgaaacttattt 52841500  T
Q  184 caaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
     || || || |||| |||||||||| |||| | || |||||||||||    
T  52841499 taaggataagacaagaaactatactacaaactattgtgttttagttt 52841453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 85 - 165
Target Start/End: Original strand, 47026655 - 47026736
Alignment:
Q  85 aattaaatgcaaattacattcaattttctctttctttcattttttccataaccaa-tagccaatgaaaattgtttttacatc 165  Q
    ||||||||||||||||||||||| ||| | | ||||||||||||||| ||||||| ||||||||||||||| ||| ||||||    
T  47026655 aattaaatgcaaattacattcaaatttttttctctttcattttttccttaaccaattagccaatgaaaattatttatacatc 47026736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 83 - 186
Target Start/End: Original strand, 15912204 - 15912307
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| | |||||||||| ||||   ||||||||| ||  ||| ||| |  ||||||||||||||||||||||||| |||||||||| ||    
T  15912204 aaaattaaatgcaaactgcattcaatttgctctccttttcattttctctgtaatcaacaatcaatgaaaattgtttttacatcttcctataaaacttatt 15912303  T
Q  183 tcaa 186  Q
    ||||    
T  15912304 tcaa 15912307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 83 - 205
Target Start/End: Original strand, 41063747 - 41063870
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaa-ctttt 181  Q
    ||||||||||||||| | ||||||||||  ||| ||||| ||||| || ||||| |||| |||||||||||| ||||||||||||  ||||||| ||| |    
T  41063747 aaaattaaatgcaaagtgcattcaatttgttctctctttgattttctcaataacaaataaccaatgaaaattatttttacatctttctataaaagcttat 41063846  T
Q  182 ttcaaagaaaacacaaaaaactat 205  Q
    || ||  | |||||||||||||||    
T  41063847 tttaagaataacacaaaaaactat 41063870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 143 - 230
Target Start/End: Original strand, 50176588 - 50176675
Alignment:
Q  143 ccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||| |||||||||||||||||||| ||||||| || ||||||||| |||||||||||||||  | |||| |  |||||||||||||    
T  50176588 ccaataaaaattgtttttacatcttcctataaaatttatttcaaagataacacaaaaaactatgttacaaactactatgttttagttt 50176675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 230
Target Start/End: Original strand, 42724101 - 42724247
Alignment:
Q  84 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttttt 183  Q
    |||||||||||||||| |||| ||||| ||||  || ||||||| | |||||| |||| | ||| |||||||||||||||||||||  | |||||  |||    
T  42724101 aaattaaatgcaaattgcatttaatttgctctccctatcattttcttcataacaaataactaataaaaattgtttttacatcttctcgtgaaactaattt 42724200  T
Q  184 caaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||  | |||| || |||||||||| |||||  | ||||||||||||    
T  42724201 caagaagaacagaagaaactatacttcaaatgataatgttttagttt 42724247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 13351686 - 13351786
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    |||| |||||||||| | ||||||||||  |||   ||||||||| || |||| |||   |||||||||||||||||||||||||| |||||||||||||    
T  13351686 aaaactaaatgcaaagtgcattcaatttgttctccttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttttt 13351785  T
Q  183 t 183  Q
    |    
T  13351786 t 13351786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 129
Target Start/End: Original strand, 50665259 - 50665315
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttttt 129  Q
    |||||||||| ||||||| ||||||||||||| |||||||||| |||||||||||||    
T  50665259 ttattctcatgaaattaattgcaaattacatttaattttctctctctttcatttttt 50665315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 34102127 - 34102049
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttac 162  Q
    ||||||||||||||| | ||| |||||| |||| ||||||| ||| || |||||||||| ||||||||||||||||||||    
T  34102127 aaaattaaatgcaaagtgcat-caatttgctctctctttcactttctcaataaccaataaccaatgaaaattgtttttac 34102049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 230
Target Start/End: Original strand, 7190663 - 7190809
Alignment:
Q  84 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttttt 183  Q
    |||||||||||||||| | || ||||| ||||  || ||||||| || ||||| |||| | |||  ||||| |||||||||||| | ||  ||||  |||    
T  7190663 aaattaaatgcaaattgcctttaatttgctctccctctcattttctctataacaaataactaatataaattatttttacatcttttcattgaactaattt 7190762  T
Q  184 caaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||| || ||||||| ||||||||||| ||||| | ||||||||||||    
T  7190763 caaggagaacacaagaaactatactctaaattatcatgttttagttt 7190809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 201
Target Start/End: Original strand, 16661521 - 16661639
Alignment:
Q  83 aaaattaaatgcaaattacattcaattt--tctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttt 180  Q
    ||||||||||||||| | ||||||||||  ||||||| ||||||||| || | || |||   ||||| ||||||||||||||||| || ||| ||||||     
T  16661521 aaaattaaatgcaaagtgcattcaatttgttctcttt-tttcattttctctagaatcaactaccaataaaaattgtttttacatcctcctat-aaactta 16661618  T
Q  181 tttcaaagaaaacacaaaaaa 201  Q
    ||||||||| |||||||||||    
T  16661619 tttcaaagataacacaaaaaa 16661639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 6786746 - 6786781
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatc 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  6786746 gtcccaaaatataagcaaaaaagacaaacttttatc 6786781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 7468205 - 7468170
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatc 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  7468205 gtcccaaaatataagcaaaaaagacaaacttttatc 7468170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 28016996 - 28016961
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatc 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  28016996 gtcccaaaatataagcaaaaaagacaaacttttatc 28016961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 53
Target Start/End: Complemental strand, 6787242 - 6787208
Alignment:
Q  19 tcccaaaatataagcaaaaaagacaaacttttatc 53  Q
    |||||||||||||||||||||||||||||||||||    
T  6787242 tcccaaaatataagcaaaaaagacaaacttttatc 6787208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 111
Target Start/End: Original strand, 11241039 - 11241077
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaatttt 111  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  11241039 ttattctcataaaattaaatgtaaattacattcaatttt 11241077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 167
Target Start/End: Complemental strand, 28916675 - 28916589
Alignment:
Q  81 ataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctt 167  Q
    ||||||||||||||||||| ||||||||||  ||||  ||| ||||| |||||||    || |||||||||||| ||||||||||||    
T  28916675 ataaaattaaatgcaaattgcattcaatttgttcttctttttattttctccataatttttaaccaatgaaaattatttttacatctt 28916589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 44149084 - 44149050
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttat 52  Q
    |||||||||||||||||||||||||||||||||||    
T  44149084 gtcccaaaatataagcaaaaaagacaaacttttat 44149050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 197
Target Start/End: Complemental strand, 51339012 - 51338938
Alignment:
Q  123 attttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaa 197  Q
    ||||| || ||||| |||| ||||||||||||| |||||||||||  ||| |||||| ||||||||| |||||||    
T  51339012 attttctctataactaataaccaatgaaaattgattttacatctttctatgaaacttatttcaaagacaacacaa 51338938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 15959892 - 15959855
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatctt 55  Q
    |||||||||||||||||||||||||||| |||||||||    
T  15959892 gtcccaaaatataagcaaaaaagacaaatttttatctt 15959855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 207
Target Start/End: Complemental strand, 23873986 - 23873861
Alignment:
Q  82 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 181  Q
    |||||||||||||||||| |||| |||||  ||| | ||| ||||| |||||||    || |||||||||||| ||||||||||||   || |||||| |    
T  23873986 taaaattaaatgcaaattgcatttaatttgttctcttttttattttctccataatttttaaccaatgaaaattatttttacatctttccatgaaacttat 23873887  T
Q  182 ttcaaagaaaacacaaaaaactatac 207  Q
    | ||| || ||||||||||| |||||    
T  23873886 tccaaggagaacacaaaaaattatac 23873861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 156
Target Start/End: Complemental strand, 39151315 - 39151242
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgt 156  Q
    ||||||||||| ||| | |||||||||| || | ||||||||||| || ||||| |||| ||||||||||||||    
T  39151315 aaaattaaatgtaaagtgcattcaatttgctttatctttcattttatcaataactaataaccaatgaaaattgt 39151242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 207
Target Start/End: Complemental strand, 43656196 - 43656071
Alignment:
Q  82 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 181  Q
    |||||||||||||||||| ||||||||||  |||   ||| ||||| | |||||    || |||||||||||| ||||||||||||   || |||||| |    
T  43656196 taaaattaaatgcaaattgcattcaatttgttctcctttttattttcttcataatttttaaccaatgaaaattatttttacatctttccatgaaacttat 43656097  T
Q  182 ttcaaagaaaacacaaaaaactatac 207  Q
    ||||| || ||||||||||| |||||    
T  43656096 ttcaaggagaacacaaaaaattatac 43656071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 127
Target Start/End: Original strand, 43359696 - 43359740
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcatttt 127  Q
    ||||||||||||||| |||||||||||| |||| |||||||||||    
T  43359696 aaaattaaatgcaaagtacattcaatttgctctctctttcatttt 43359740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 2125977 - 2126016
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatctttt 57  Q
    |||| |||||||||| ||||||||||||||||||||||||    
T  2125977 gtcctaaaatataagtaaaaaagacaaacttttatctttt 2126016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 207
Target Start/End: Original strand, 35884212 - 35884337
Alignment:
Q  82 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 181  Q
    |||||||||||||||||| |||| ||| |  ||||  ||| ||||| || ||||    || |||||||||||| ||||||||||||   |||||| || |    
T  35884212 taaaattaaatgcaaattgcattaaatgtgttcttctttttattttctctataatttttaaccaatgaaaattatttttacatctttccataaaatttat 35884311  T
Q  182 ttcaaagaaaacacaaaaaactatac 207  Q
    |||||| | ||||||||||| |||||    
T  35884312 ttcaaaaagaacacaaaaaattatac 35884337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 162
Target Start/End: Complemental strand, 44056457 - 44056377
Alignment:
Q  82 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttac 162  Q
    ||||||||||||||| || ||||| |||||||||   | | ||||| ||||||| || || ||||||| ||||||||||||    
T  44056457 taaaattaaatgcaatttgcattccattttctctccttcttattttctccataatcattaaccaatgagaattgtttttac 44056377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 46803760 - 46803704
Alignment:
Q  149 aaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactat 205  Q
    |||||||||||||||||||  ||| |||||| || ||| || |||||||||||||||    
T  46803760 aaaattgtttttacatctttctatgaaacttattgcaaggataacacaaaaaactat 46803704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 155; Significance: 3e-82; HSPs: 74)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 18 - 230
Target Start/End: Complemental strand, 11262105 - 11261892
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnngtt-attctcataaaattaaatgcaaattacattcaattttctctt 116  Q
    ||||||||||||||| ||||||||||||||||||||||||||||          ||| ||||||||||||||||||||||||||||||||||||||||||    
T  11262105 gtcccaaaatataagtaaaaaagacaaacttttatcttttccaagattttttttgtttattctcataaaattaaatgcaaattacattcaattttctctt 11262006  T
Q  117 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  11262005 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaattatactccaaattc 11261906  T
Q  217 ttatgttttagttt 230  Q
    | |||| |||||||    
T  11261905 tcatgtgttagttt 11261892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 18 - 230
Target Start/End: Original strand, 6686323 - 6686538
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnn--gttattctcataaaattaaatgcaaattacattcaattttctct 115  Q
    |||||||||||||| ||||||||| |||||||||||||||||||            ||||||||||||||||||||||||||||||||||||||||||||    
T  6686323 gtcccaaaatataaacaaaaaagataaacttttatcttttccaagattttttttttgttattctcataaaattaaatgcaaattacattcaattttctct 6686422  T
Q  116 ttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttttt-caaagaaaacacaaaaaactatactccaaat 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  6686423 ttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttttccaaagaaaacacaaaaaactatactccaaat 6686522  T
Q  215 tcttatgttttagttt 230  Q
    ||||||||||||||||    
T  6686523 tcttatgttttagttt 6686538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 21 - 230
Target Start/End: Complemental strand, 43590180 - 43589970
Alignment:
Q  21 ccaaaatataagcaaaaaagacaaacttttatcttttccaa-annnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttct 119  Q
    ||||||||||||||||||| ||||||||||||||||| ||| |         ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43590180 ccaaaatataagcaaaaaatacaaacttttatctttttcaagatttttttttgttattctcataaaattaaatgcaaattacattcaattttctctttct 43590081  T
Q  120 ttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattctta 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||  |||||||||||||||||||||||||||||||||||    
T  43590080 ttcattttttccataaccaatagccaatgaaaattgtttttacatctccctataaaactttttcaaaagaaaacacaaaaaactatactccaaattctta 43589981  T
Q  220 tgttttagttt 230  Q
    |||||||||||    
T  43589980 tgttttagttt 43589970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 18 - 230
Target Start/End: Complemental strand, 37522811 - 37522597
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnngt-tattctcataaaa-ttaaatgcaaattacattcaattttctct 115  Q
    |||||||||||||||||||||||||||||||||||||||||||           || ||||||||||||| |||||||||||||||||||||||||||||    
T  37522811 gtcccaaaatataagcaaaaaagacaaacttttatcttttccatgattttttttgtctattctcataaaaattaaatgcaaattacattcaattttctct 37522712  T
Q  116 ttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaatt 215  Q
     ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||    
T  37522711 gtctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaaaaaaacacaaaaaactatactccaaatt 37522612  T
Q  216 cttatgttttagttt 230  Q
    |||||||||||||||    
T  37522611 cttatgttttagttt 37522597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 18 - 230
Target Start/End: Complemental strand, 37562983 - 37562769
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnngtt-attctcataaaattaaatgcaaattacattcaattttctctt 116  Q
    |||||||||||||||||||||||||||||||||||||||||||           ||| |||||||||||||||||||||||||||||||||||||||||     
T  37562983 gtcccaaaatataagcaaaaaagacaaacttttatcttttccatgattttttttgtttattctcataaaattaaatgcaaattacattcaattttctctg 37562884  T
Q  117 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttc-aaagaaaacacaaaaaactatactccaaatt 215  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| | ||| |||||||||||||||||||||||||||    
T  37562883 tctttcattttttccataaacaatagctaatgaaaattgtttttacatcttcctataaaactttttccaaaaaaaaacacaaaaaactatactccaaatt 37562784  T
Q  216 cttatgttttagttt 230  Q
    |||||||||||||||    
T  37562783 cttatgttttagttt 37562769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 42273645 - 42273800
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||||||||||||||||||| |||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  42273645 ttattctcataaaattaaatgcaaattgcattcaattttctct--ctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcttat 42273742  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  42273743 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 42273800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 20644010 - 20644167
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  20644010 ttattctcatgaaattaaatgcaaattacattcaattttccctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 20644109  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  20644110 aaaactttttccaaagaaaacacaaaaaattatactccaaattcttatgttttagttt 20644167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 34425327 - 34425483
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||| ||||| ||||||| |||||||||||||||||||||||||||| ||| |||    
T  34425327 ttattctcataaaattaaatgcaaattatattcaattttctctctcttttatttt-tccataatcaatagccaatgaaaattgtttttacatattcctat 34425425  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  34425426 aaaacttttttcaaagaaaacacaaaaaactatacttcaaattcttatgttttagttt 34425483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 75 - 230
Target Start/End: Original strand, 20039100 - 20039255
Alignment:
Q  75 attctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataa 174  Q
    |||||||||||||||||||||||||||||| |||||||| | ||||||||||||| ||||||||||||||||| ||||||| |||||||||||| |||||    
T  20039100 attctcataaaattaaatgcaaattacatttaattttctatctctttcatttttttcataaccaatagccaataaaaattggttttacatcttcctataa 20039199  T
Q  175 aacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  20039200 aacctttttcaaagaaaacacaaaaaattatactccaaattcttatgttttagttt 20039255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 73 - 219
Target Start/End: Original strand, 32110998 - 32111144
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||    
T  32110998 ttattctcataaaattaaatgcaaattacatttaattttctctctctttcatattttccataaccaatagtcaatgaaaattgtttttacatcttcctat 32111097  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattctta 219  Q
     |||||||||||||||||||||||||| | |||||||||||||||||    
T  32111098 gaaacttttttcaaagaaaacacaaaacattatactccaaattctta 32111144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 38130281 - 38130121
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||    
T  38130281 ttattctcataaaattaaatgtagattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattatttttacatattcctat 38130182  T
Q  173 aaaacttttttcaaagaaaacacaaaaa---actatactccaaattcttatgttttagttt 230  Q
    ||||||||||  ||||||||||||||||   |||||| |||||||||||||||||||||||    
T  38130181 aaaactttttctaaagaaaacacaaaaaactactatattccaaattcttatgttttagttt 38130121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 74 - 230
Target Start/End: Original strand, 19413138 - 19413294
Alignment:
Q  74 tattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttata 173  Q
    ||||||||| ||||||||||||||||||||| ||||||| || ||||| |||||||||||||||||| |||||||||||||||||||||||||||  |||    
T  19413138 tattctcatgaaattaaatgcaaattacatttaattttccctctcttttattttttccataaccaattgccaatgaaaattgtttttacatcttcccata 19413237  T
Q  174 aaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||||| ||||||||||||||||||||||||| || |||||||||||  ||||||||    
T  19413238 aaacttatttcaaagaaaacacaaaaaactatgctacaaattcttatactttagttt 19413294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 73 - 199
Target Start/End: Original strand, 38280843 - 38280969
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||| ||| |||    
T  38280843 ttattctcataaaattaaatgcaaattatattcaattttctctctctttcattttttccataatcaataaccaatgaaaattgtttttacattttcctat 38280942  T
Q  173 aaaacttttttcaaagaaaacacaaaa 199  Q
    ||||||||||||||||||| |||||||    
T  38280943 aaaacttttttcaaagaaagcacaaaa 38280969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 73 - 223
Target Start/End: Original strand, 8225459 - 8225608
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgttttt-acatcttctta 171  Q
    ||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||| || ||||| |||| ||| ||    
T  8225459 ttattctcataaaattaaatgcaaattacgttcaattttctct--ctttcattttttccataaccaatagccaatgaaattttttttttacattttccta 8225556  T
Q  172 taaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtt 223  Q
    ||||||||||| ||||||||| ||||||||||||| ||||||||||| ||||    
T  8225557 taaaactttttccaaagaaaatacaaaaaactatagtccaaattcttttgtt 8225608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 25840860 - 25841017
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||| ||||||||||||| |||| | |||||||||||||||||||||||||  ||    
T  25840860 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttattttttccataaacaattgtcaatgaaaattgtttttacatcttcccat 25840959  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
     |||||| || |||||||||||||||||||||| || |||||| ||||| ||||||||    
T  25840960 gaaacttattccaaagaaaacacaaaaaactatgctacaaatttttatgctttagttt 25841017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 83 - 230
Target Start/End: Complemental strand, 12912449 - 12912303
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| | |||| ||||| |||| |||||||||||||| | |||||||| |||||||||||||||||||||||||| |||||||||| ||    
T  12912449 aaaattaaatgcaaagtgcatttaatttgctctctctttcattttttcaacaaccaataaccaatgaaaattgtttttacatcttcctataaaacttatt 12912350  T
Q  183 tcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||| |||||||||||||||| ||||| | | |||||||||||||    
T  12912349 tcaaagataacacaaaaaactatattccaactac-tatgttttagttt 12912303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 77 - 226
Target Start/End: Complemental strand, 43454484 - 43454335
Alignment:
Q  77 tctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaa 176  Q
    ||||||| ||||||||| ||||||||||||||||||||| ||||| ||||| | | ||||||||||  |||||||||||||||||||| ||| |||||||    
T  43454484 tctcatagaattaaatgtaaattacattcaattttctctctcttttattttcttcttaaccaatagtaaatgaaaattgtttttacatattcctataaaa 43454385  T
Q  177 cttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 226  Q
    ||| |  ||||||||||||||||||||||| | ||| |||||||||||||    
T  43454384 cttatgacaaagaaaacacaaaaaactatatttcaagttcttatgtttta 43454335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 73 - 220
Target Start/End: Complemental strand, 39505397 - 39505250
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||| |||||| ||||||| ||| ||||||||||||||||||||||||||   ||    
T  39505397 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttattttt-ccataacgaattgccaatgaaaattgtttttacatcttaccat 39505299  T
Q  173 aaaacttttttcaaagaaaacacaa-aaaactatactccaaattcttat 220  Q
    ||||||| || |||||||||||||| |||||||| || |||||||||||    
T  39505298 aaaacttattccaaagaaaacacaaaaaaactatgctacaaattcttat 39505250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 4463356 - 4463511
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||| ||||| ||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||    
T  4463356 ttatactcatgaaattaattgcaaattacatttaattttctctctctttcattttttccataaccaatagccagtgaaaattgtttttacatcttcccat 4463455  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
     || ||| || ||||||||||||  | ||| || || |||||||||||| ||||||||    
T  4463456 gaagcttattccaaagaaaacac--acaaccatgctacaaattcttatgctttagttt 4463511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 17351384 - 17351541
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||| |||||||||| ||||||||||||||||||||| | | ||||||| ||||||| ||||||||||| |||||||||||||||||||   ||    
T  17351384 ttattctcatgaaattaaatgaaaattacattcaattttctctctatgtcattttctccataatcaatagccaattaaaattgtttttacatctttccat 17351483  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||| || ||| ||||| | ||||||||||||||||| || ||| || |||||||    
T  17351484 aaaacttattccaacgaaaataaaaaaaactatactccaagtttttacgtattagttt 17351541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 73 - 182
Target Start/End: Original strand, 32017700 - 32017808
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||| |||| |||||||||||||| ||||||||||||||||||||||||| |||    
T  32017700 ttattctcataaaattaaatgcaaattacattcaactttctctctctttcgtttt-tccataaccaatagacaatgaaaattgtttttacatcttcctat 32017798  T
Q  173 aaaacttttt 182  Q
    ||||| ||||    
T  32017799 aaaacgtttt 32017808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 41625675 - 41625520
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||| |||| ||||||||| ||||||||||| ||||||| || |||| ||||||||| |||| ||||||| |||||||||  ||||||||||||| |||    
T  41625675 ttattttcatgaaattaaattcaaattacatttaattttccctctcttccattttttc-ataatcaatagcgaatgaaaataatttttacatcttcctat 41625577  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
     |||||| |||||||||||||||||||||||||| |  ||||||||||||||||||||    
T  41625576 gaaacttatttcaaagaaaacacaaaaaactata-tttaaattcttatgttttagttt 41625520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 73 - 220
Target Start/End: Complemental strand, 5984280 - 5984126
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaat-------gaaaattgtttttacatc 165  Q
    ||||||||||||||||||||| |||||||||| ||| |||||| ||||||||||| || |||||||||| |||||       |||||||||||||||||     
T  5984280 ttattctcataaaattaaatgtaaattacattaaatattctctctctttcattttctctataaccaataaccaatagtcaatgaaaattgtttttacata 5984181  T
Q  166 ttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttat 220  Q
    ||  |||||||||| || |||||||||||||||||||||||||| ||||||||||    
T  5984180 tttctataaaacttattccaaagaaaacacaaaaaactatactctaaattcttat 5984126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 78 - 226
Target Start/End: Complemental strand, 42104408 - 42104262
Alignment:
Q  78 ctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaac 177  Q
    ||||| |||||||||||||| ||||||||||||| ||  |||| |||||| |||||||  |||||||||||||||||||||||||||||||  || ||||    
T  42104408 ctcatgaaattaaatgcaaaatacattcaattttatcactcttccattttctccataattaatagccaatgaaaattgtttttacatcttcccatgaaac 42104309  T
Q  178 ttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 226  Q
    || || |||||| |||||  |||| ||||||||||||||||||||||||    
T  42104308 ttgttccaaagagaacac--aaaattatactccaaattcttatgtttta 42104262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 73 - 168
Target Start/End: Complemental strand, 9957581 - 9957489
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttc 168  Q
    ||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9957581 ttattctcataaaattaaatgcaaattacattcaactttctct--ctttcattttttc-ataaccaatagccaatgaaaattgtttttacatcttc 9957489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 74 - 192
Target Start/End: Complemental strand, 104386 - 104260
Alignment:
Q  74 tattctcataaaattaaatgcaaattacattcaattttctctttct--------ttcattttttccataaccaatagccaatgaaaattgtttttacatc 165  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||        |||||||||| |||||| |||||| |||||||||||||||||||||    
T  104386 tattctcataaaattaaatgcatattacattcaattttctctctctctctctctttcatttttttcataactaatagctaatgaaaattgtttttacatc 104287  T
Q  166 ttcttataaaacttttttcaaagaaaa 192  Q
    ||  |||||||||||||||||| ||||    
T  104286 tttctataaaacttttttcaaaaaaaa 104260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 111 - 227
Target Start/End: Original strand, 23233445 - 23233561
Alignment:
Q  111 tctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactcc 210  Q
    ||||| ||||||||||| ||||||||||||||  ||| |||| ||||||||||| ||| ||||||  | ||||||||||||||||||||||||||||  |    
T  23233445 tctctctctttcattttctccataaccaatagttaataaaaactgtttttacatattcctataaagttgttttcaaagaaaacacaaaaaactatacgtc 23233544  T
Q  211 aaattcttatgttttag 227  Q
    |||||||||||||||||    
T  23233545 aaattcttatgttttag 23233561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 111 - 230
Target Start/End: Complemental strand, 12792903 - 12792794
Alignment:
Q  111 tctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactcc 210  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||| ||||| ||||| |||||||         |||||||||||||||||||||||||    
T  12792903 tctctctctttcattttctccataaccaatagccaatgaaaattgtctttac-tcttcctataaaa---------aagaaaacacaaaaaactatactcc 12792814  T
Q  211 aaattcttatgttttagttt 230  Q
    || |||||||||||||||||    
T  12792813 aatttcttatgttttagttt 12792794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 83 - 205
Target Start/End: Complemental strand, 5369186 - 5369064
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| | ||||||||   | || ||||||||||| || |||||||| | |||||||||||||||||||||||||| |||||||||| ||    
T  5369186 aaaattaaatgcaaagtgcattcaataagccctctctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaacttatt 5369087  T
Q  183 tcaaagaaaacacaaaaaactat 205  Q
    | ||| | |||||||||||||||    
T  5369086 ttaaaaataacacaaaaaactat 5369064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 83 - 179
Target Start/End: Complemental strand, 10154083 - 10153987
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactt 179  Q
    ||||||||||||||| | |||||||||| || | ||||||||||| || || ||||||| |||||||||||||||||||||||||| ||||||||||    
T  10154083 aaaattaaatgcaaagtgcattcaatttgctatctctttcattttctcaatgaccaataaccaatgaaaattgtttttacatcttcctataaaactt 10153987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 111 - 230
Target Start/End: Complemental strand, 12730001 - 12729892
Alignment:
Q  111 tctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactcc 210  Q
    ||||| ||| ||||||| |||||||||||||||||||||||||||| ||||| ||||| |||||||         |||||||||||||||||||||||||    
T  12730001 tctctctctctcattttctccataaccaatagccaatgaaaattgtctttac-tcttcctataaaa---------aagaaaacacaaaaaactatactcc 12729912  T
Q  211 aaattcttatgttttagttt 230  Q
    || |||||||||||||||||    
T  12729911 aatttcttatgttttagttt 12729892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 83 - 200
Target Start/End: Complemental strand, 3463970 - 3463853
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| | |||||||||| |||| | ||||||||| || |||| |||   ||||| ||||||||||||| |||||| |||||||||| ||    
T  3463970 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaataaaaattgtttttatatcttcctataaaacttatt 3463871  T
Q  183 tcaaagaaaacacaaaaa 200  Q
    ||||||| ||||||||||    
T  3463870 tcaaagataacacaaaaa 3463853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 83 - 230
Target Start/End: Complemental strand, 16153500 - 16153354
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    |||||||||| |||| | |||| ||||| |||| | ||||| ||| || |||| |||   ||||||||||| |||||||||||||| |||||||||| ||    
T  16153500 aaaattaaatacaaagtgcatttaatttgctctctttttcactttctctataatcaactaccaatgaaaat-gtttttacatcttcctataaaacttatt 16153402  T
Q  183 tcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||| |||||||||||||||  | |||| | ||||||||||||||    
T  16153401 tcaaagataacacaaaaaactatgttacaaactattatgttttagttt 16153354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 83 - 204
Target Start/End: Original strand, 8959646 - 8959767
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||| ||| | | |||||||| |||| | || |||||| || |||| |||    ||||||||||||||||||||||||| |||||||||| ||    
T  8959646 aaaattaaatgtaaagtgcgttcaatttgctctcttttccattttctctataatcaactatcaatgaaaattgtttttacatcttcctataaaacttatt 8959745  T
Q  183 tcaaagaaaacacaaaaaacta 204  Q
    ||||||| ||||||||||||||    
T  8959746 tcaaagataacacaaaaaacta 8959767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 73 - 181
Target Start/End: Original strand, 7071234 - 7071342
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||| ||||||||| ||||||||||||||||||| |  |||| |||||| ||| ||| |||||| ||||||||||| ||||||||| |||  ||    
T  7071234 ttattctcatgaaattaaatacaaattacattcaattttcacgctcttccattttctccgtaatcaatagtcaatgaaaattatttttacattttcccat 7071333  T
Q  173 aaaactttt 181  Q
     ||||||||    
T  7071334 gaaactttt 7071342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 83 - 230
Target Start/End: Original strand, 8506443 - 8506584
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| | |||||||||| |||| ||||||||||| || ||||||      ||||||||||||||||||||||||  |||||||||| ||    
T  8506443 aaaattaaatgcaaagtgcattcaatttgctctatctttcattttctcaataacc------caatgaaaattgtttttacatctttctataaaacttatt 8506536  T
Q  183 tcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||| || |||| || |||||||  | |||| |  |||||||||||||    
T  8506537 tcaaggataacataagaaactatgttgcaaactactatgttttagttt 8506584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 205
Target Start/End: Complemental strand, 5736395 - 5736273
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| | | |||||||| ||||  |||||||||| ||  ||| |||   | ||||||||||||||||||| |||| ||||||| || ||    
T  5736395 aaaattaaatgcaaaatgcgttcaatttgctctccctttcattttctctgtaatcaacgacaaatgaaaattgtttttacaacttcctataaaatttatt 5736296  T
Q  183 tcaaagaaaacacaaaaaactat 205  Q
    ||||||| |||| ||||||||||    
T  5736295 tcaaagataacataaaaaactat 5736273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 115
Target Start/End: Complemental strand, 12730145 - 12730103
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctct 115  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  12730145 ttattctcataaaattaaatgcaaattacattcaattttctct 12730103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 82 - 167
Target Start/End: Original strand, 24439575 - 24439660
Alignment:
Q  82 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctt 167  Q
    |||||||||||||||||| ||||||||||  |||   ||| |||||||||||||  | |||||||||| |||||||||||||||||    
T  24439575 taaaattaaatgcaaattgcattcaatttgttctcctttttattttttccataataattagccaatgataattgtttttacatctt 24439660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 32019929 - 32019974
Alignment:
Q  185 aaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  32019929 aaagaaaacacagaaaactatactccaaattcttatgttttagttt 32019974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 842787 - 842744
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaa 61  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  842787 gtcccaaaatataagcaaaaaagataaacttttatcttttccaa 842744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 143 - 205
Target Start/End: Complemental strand, 1144586 - 1144524
Alignment:
Q  143 ccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactat 205  Q
    |||||||||||||||||||||| ||| ||||||| || ||| ||||| |||||||||||||||    
T  1144586 ccaatgaaaattgtttttacatattcctataaaatttattttaaagataacacaaaaaactat 1144524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 230
Target Start/End: Original strand, 32079512 - 32079657
Alignment:
Q  84 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttttt 183  Q
    |||||||||||||||| |||| ||||| ||||  || ||||||| ||  |||  ||||  | ||||||||||||||||||||||   || |||||  |||    
T  32079512 aaattaaatgcaaattgcatttaattt-ctctccctctcattttctctgtaataaataatcgatgaaaattgtttttacatctttccattaaactaattt 32079610  T
Q  184 caaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||| || |||| ||||||||||| |||||||| | ||||||||||||    
T  32079611 caaggagaacataaaaaactataatccaaattataatgttttagttt 32079657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 205
Target Start/End: Original strand, 6391876 - 6391997
Alignment:
Q  84 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttttt 183  Q
    ||||||| |||||||| |||| | | | || | ||||||||||| || ||||| |||| ||||| ||| |||||||||||||||  ||| |||||| |||    
T  6391876 aaattaattgcaaattgcatttattatactttctctttcattttctctataactaataaccaataaaagttgtttttacatctttctatgaaacttattt 6391975  T
Q  184 caaagaaaacacaaaaaactat 205  Q
    ||||||  | ||||||||||||    
T  6391976 caaagatgatacaaaaaactat 6391997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 9957668 - 9957631
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatctt 55  Q
    ||||||||||||||||||||||||||||||||||||||    
T  9957668 gtcccaaaatataagcaaaaaagacaaacttttatctt 9957631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 110
Target Start/End: Complemental strand, 12792966 - 12792929
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattt 110  Q
    ||||||||||||||||||||||||||||||||||||||    
T  12792966 ttattctcataaaattaaatgcaaattacattcaattt 12792929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 201
Target Start/End: Original strand, 28907074 - 28907192
Alignment:
Q  83 aaaattaaatgcaaattacattcaattt--tctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttt 180  Q
    ||||||||||||||| | ||||||||||  ||||||| ||||||||| || | || |||   ||||| ||||||||||||||||| || ||| ||||||     
T  28907074 aaaattaaatgcaaagtgcattcaatttgttctcttt-tttcattttctctagaatcaactaccaataaaaattgtttttacatcctcctat-aaactta 28907171  T
Q  181 tttcaaagaaaacacaaaaaa 201  Q
    ||||||||| |||||||||||    
T  28907172 tttcaaagataacacaaaaaa 28907192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 201
Target Start/End: Original strand, 28943469 - 28943587
Alignment:
Q  83 aaaattaaatgcaaattacattcaattt--tctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttt 180  Q
    ||||||||||||||| | ||||||||||  ||||||| ||||||||| || | || |||   ||||| ||||||||||||||||| || ||| ||||||     
T  28943469 aaaattaaatgcaaagtgcattcaatttgttctcttt-tttcattttctctagaatcaactaccaataaaaattgtttttacatcctcctat-aaactta 28943566  T
Q  181 tttcaaagaaaacacaaaaaa 201  Q
    ||||||||| |||||||||||    
T  28943567 tttcaaagataacacaaaaaa 28943587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 29307282 - 29307221
Alignment:
Q  143 ccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaacta 204  Q
    |||||||||||| ||||||||||||| |||||||||| ||| |||||  |||||||||||||    
T  29307282 ccaatgaaaattatttttacatcttcctataaaacttattttaaagattacacaaaaaacta 29307221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 20643924 - 20643960
Alignment:
Q  19 tcccaaaatataagcaaaaaagacaaacttttatctt 55  Q
    |||||||||||||||||||||||||||||||||||||    
T  20643924 tcccaaaatataagcaaaaaagacaaacttttatctt 20643960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 117 - 201
Target Start/End: Original strand, 30703641 - 30703725
Alignment:
Q  117 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaa 201  Q
    ||||||||||| |  |||| ||||| ||||||||| || ||| ||||||||| ||||||| || ||||||||| |||||||||||    
T  30703641 tctttcattttctgaataatcaataaccaatgaaacttttttatacatcttcctataaaatttatttcaaagataacacaaaaaa 30703725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 215
Target Start/End: Original strand, 8146730 - 8146860
Alignment:
Q  84 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttttt 183  Q
    ||||||||||||||||||| | ||||| ||||  || ||||||| ||||||||  ||| ||||||||||||  ||||| || ||   ||||||||| ||     
T  8146730 aaattaaatgcaaattacaattaatttgctctccctctcattttctccataacagataaccaatgaaaatttattttaaatttttccataaaacttattc 8146829  T
Q  184 caaagaaaacacaaaaaactatactccaaatt 215  Q
    || | | ||||||| |||||||||||||||||    
T  8146830 caga-agaacacaagaaactatactccaaatt 8146860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 8225372 - 8225407
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatc 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  8225372 gtcccaaaatataagcaaaaaagacaaacttttatc 8225407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 42273558 - 42273593
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatc 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  42273558 gtcccaaaatataagcaaaaaagacaaacttttatc 42273593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 230
Target Start/End: Complemental strand, 9957488 - 9957443
Alignment:
Q  184 caaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||    
T  9957488 caaagaaaacacaaaaa-ctatactccaaattctcatgttttagttt 9957443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 39505484 - 39505450
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttat 52  Q
    |||||||||||||||||||||||||||||||||||    
T  39505484 gtcccaaaatataagcaaaaaagacaaacttttat 39505450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 207
Target Start/End: Complemental strand, 8146169 - 8146044
Alignment:
Q  82 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 181  Q
    |||||||||||||||||| ||||||||||  ||| | ||| ||||| |||||||    || | ||||| |||| ||||||||||||   || |||||| |    
T  8146169 taaaattaaatgcaaattgcattcaatttgttctcttttttattttctccataatttttaactaatgagaattatttttacatctttccatgaaacttat 8146070  T
Q  182 ttcaaagaaaacacaaaaaactatac 207  Q
    ||||| || ||||||||||| |||||    
T  8146069 ttcaaggagaacacaaaaaattatac 8146044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 207
Target Start/End: Original strand, 12638892 - 12639017
Alignment:
Q  82 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 181  Q
    |||||||||||||||||| ||||||||||  ||||  ||| ||||| |||||||    || ||||||| |||| ||||||||||||   |||||| || |    
T  12638892 taaaattaaatgcaaattgcattcaatttgttcttctttttattttctccataatttttaaccaatgagaattatttttacatctttccataaaatttat 12638991  T
Q  182 ttcaaagaaaacacaaaaaactatac 207  Q
    | ||| || ||||||||||| |||||    
T  12638992 tccaaggagaacacaaaaaattatac 12639017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 174
Target Start/End: Complemental strand, 5659676 - 5659584
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctct-ttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataa 174  Q
    ||||||||||| ||| | |||||||||| || | || |||||||||||| |||| |||   ||||| |||||||||||||||||||| |||||    
T  5659676 aaaattaaatgtaaagtgcattcaatttgctttcttttttcattttttctataatcaactaccaataaaaattgtttttacatcttcctataa 5659584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 230
Target Start/End: Complemental strand, 30893365 - 30893258
Alignment:
Q  123 attttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaag-aaaacacaaaaaactatactccaaattcttatg 221  Q
    ||||| || ||||| |||| ||||| |||||| ||||||||||||   |||||| ||  ||| ||| ||||||||| ||||||||||||||||| | |||    
T  30893365 attttatctataacaaataaccaataaaaattatttttacatctttccataaaa-ttaattctaagaaaaacacaagaaactatactccaaattatcatg 30893267  T
Q  222 ttttagttt 230  Q
    |||||||||    
T  30893266 ttttagttt 30893258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 104472 - 104437
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatc 53  Q
    ||||||||||||||| ||||||||||||||||||||    
T  104472 gtcccaaaatataagtaaaaaagacaaacttttatc 104437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 12730239 - 12730204
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatc 53  Q
    ||||||||||||||| ||||||||||||||||||||    
T  12730239 gtcccaaaatataagtaaaaaagacaaacttttatc 12730204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 34425239 - 34425274
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatc 53  Q
    |||| |||||||||||||||||||||||||||||||    
T  34425239 gtcctaaaatataagcaaaaaagacaaacttttatc 34425274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 127
Target Start/End: Complemental strand, 446054 - 446000
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttt 127  Q
    ||||| |||| |||||||||| ||||| ||||||||||| ||| |||||||||||    
T  446054 ttattatcatgaaattaaatgaaaattgcattcaattttttctctctttcatttt 446000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 147
Target Start/End: Original strand, 1238522 - 1238596
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaat 147  Q
    ||||||| |||||||||||  |||||||||||||||||||| | ||   |||||| || ||||||||||| ||||    
T  1238522 ttattcttataaaattaaaaacaaattacattcaattttctttctcccccattttctctataaccaataggcaat 1238596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 55
Target Start/End: Original strand, 7071150 - 7071184
Alignment:
Q  21 ccaaaatataagcaaaaaagacaaacttttatctt 55  Q
    ||||||||||||| |||||||||||||||||||||    
T  7071150 ccaaaatataagcgaaaaagacaaacttttatctt 7071184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 107
Target Start/End: Original strand, 23233395 - 23233429
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaa 107  Q
    |||||||||||||| ||||||||||||||||||||    
T  23233395 ttattctcataaaaataaatgcaaattacattcaa 23233429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 25840772 - 25840806
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttat 52  Q
    ||||||||||||||||||||| |||||||||||||    
T  25840772 gtcccaaaatataagcaaaaatgacaaacttttat 25840806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 207
Target Start/End: Original strand, 13146732 - 13146857
Alignment:
Q  82 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 181  Q
    |||||||||||| ||||| ||||||||||  |||   |||  |||| |||||||    || ||||||| |||| ||||||||||||   ||||||||| |    
T  13146732 taaaattaaatgtaaattgcattcaatttgttctcatttttgttttctccataatttttaaccaatgagaattatttttacatctttccataaaacttat 13146831  T
Q  182 ttcaaagaaaacacaaaaaactatac 207  Q
    | |||||| ||||||||||| |||||    
T  13146832 tccaaagagaacacaaaaaattatac 13146857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 158
Target Start/End: Complemental strand, 29493669 - 29493592
Alignment:
Q  81 ataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgttt 158  Q
    |||||||| ||||||||||| ||||||||| | || |||   ||||| |||||||||||||  |||| ||||||||||    
T  29493669 ataaaattgaatgcaaattatattcaatttacactctctcctattttctccataaccaataatcaataaaaattgttt 29493592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 205
Target Start/End: Original strand, 32432319 - 32432380
Alignment:
Q  144 caatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactat 205  Q
    ||||||||||| ||||||||||||  |||||||||| |||||| || |||| || |||||||    
T  32432319 caatgaaaattatttttacatctttatataaaacttatttcaaggataacataagaaactat 32432380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 53
Target Start/End: Complemental strand, 12793056 - 12793024
Alignment:
Q  21 ccaaaatataagcaaaaaagacaaacttttatc 53  Q
    ||||||||||||||||||| |||||||||||||    
T  12793056 ccaaaatataagcaaaaaatacaaacttttatc 12793024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 207
Target Start/End: Complemental strand, 16286178 - 16286114
Alignment:
Q  143 ccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatac 207  Q
    ||||||| |||| |||||||||||| | || |||||| || |||||| ||||||||||| |||||    
T  16286178 ccaatgagaattatttttacatcttttcatgaaacttattccaaagagaacacaaaaaattatac 16286114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 110
Target Start/End: Complemental strand, 17825354 - 17825326
Alignment:
Q  82 taaaattaaatgcaaattacattcaattt 110  Q
    |||||||||||||||||||||||||||||    
T  17825354 taaaattaaatgcaaattacattcaattt 17825326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 148; Significance: 4e-78; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 18 - 230
Target Start/End: Complemental strand, 28599369 - 28599155
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaa-annnnnnnnngtt-attctcataaaattaaatgcaaattacattcaattttctct 115  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |         ||| ||||||||||||||||||||| |||||||||||||||||||    
T  28599369 gtcccaaaatataatcaaaaaagacaaacttttatcttttccaagatttttttttgtttattctcataaaattaaatgcatattacattcaattttctct 28599270  T
Q  116 ttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaatt 215  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||    
T  28599269 ttctttcattttttccataaccaatagccaatgaaaattatttttacatcttcctataaatctttttccaaagaaaacacaaaaaactatactccaaatt 28599170  T
Q  216 cttatgttttagttt 230  Q
    |||||||||||||||    
T  28599169 cttatgttttagttt 28599155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 18 - 230
Target Start/End: Complemental strand, 6110421 - 6110206
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnngtt-attctcataaaattaaatgcaaattacattcaattttctctt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||          ||| |||||||||||||||||||||||||||||||||||||||||     
T  6110421 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaagattttttttgtttattctcataaaattaaatgcaaattacattcaattttctctc 6110322  T
Q  117 tct--ttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaat 214  Q
    |||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||| |||||||||||||    
T  6110321 tctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccgaagaaaacacaaaaagctatactccaaat 6110222  T
Q  215 tcttatgttttagttt 230  Q
    ||||||||||||||||    
T  6110221 tcttatgttttagttt 6110206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 21 - 230
Target Start/End: Original strand, 35517065 - 35517276
Alignment:
Q  21 ccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnn--gttattctcataaaattaaatgcaaattacattcaattttctctttc 118  Q
    ||||||||||||||||||||||||||||||||||||| |||            |||||||||||||||||||||||||||||||||||||||||||||||    
T  35517065 ccaaaatataagcaaaaaagacaaacttttatctttttcaagattttttttttgttattctcataaaattaaatgcaaattacattcaattttctctttc 35517164  T
Q  119 tttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattctt 218  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||   ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  35517165 tttcattttttccataaccaatagccaatgaaaattatttttacatctcactataaaactttttccaaagaaaacacaaaaaactatactccaaattctt 35517264  T
Q  219 atgttttagttt 230  Q
    ||||||||||||    
T  35517265 atgttttagttt 35517276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 18 - 226
Target Start/End: Original strand, 45085197 - 45085406
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnngtt-attctcataaaattaaatgcaaattacattcaattttctctt 116  Q
    |||||||||||||||||||||||| |||||||||||||||| ||          ||| |||||||||||||||||||||||||||||||||||||||||     
T  45085197 gtcccaaaatataagcaaaaaagataaacttttatcttttctaagattttttttgtttattctcataaaattaaatgcaaattacattcaattttctctc 45085296  T
Q  117 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 216  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  45085297 tctttcattttttccataaccaatggctaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaatacaaaaaactatactccaaattc 45085396  T
Q  217 ttatgtttta 226  Q
    ||||||||||    
T  45085397 ttatgtttta 45085406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 18 - 225
Target Start/End: Original strand, 41528196 - 41528404
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnngtt-attctcataaaattaaatgcaaattacattcaattttctctt 116  Q
    |||||||||||||||||||||||||||||||||||||||| |||          ||| ||||||||||||||||||||||||||||||||||||||||||    
T  41528196 gtcccaaaatataagcaaaaaagacaaacttttatctttttcaagattttttttgtttattctcataaaattaaatgcaaattacattcaattttctctt 41528295  T
Q  117 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    |||||||||||||||||||||||||||| |||||||    
T  41528296 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaaaaaatttcaaagaaaacacaaaaaactatacttcaaattc 41528395  T
Q  217 ttatgtttt 225  Q
    |||||||||    
T  41528396 ttatgtttt 41528404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 3201322 - 3201479
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  3201322 ttattctcataaaattaaatgcaaattacattcaattttatctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctat 3201421  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||    
T  3201422 aaaactttttccaaagaaaacacaaaaaactatactttaaattcttatgttttagttt 3201479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 19264095 - 19264253
Alignment:
Q  73 ttattctcataaaattaaatgcaaa-ttacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttctta 171  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||    
T  19264095 ttattctcataaaattaaatgcaaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattgtttttacatcttccta 19264194  T
Q  172 taaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||    
T  19264195 taaaactttttccaaagaaaacacaaaaaattatactctaaattcttatgttttagttt 19264253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 45660361 - 45660521
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||||||||||||||||||||||||| |||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  45660361 ttattctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcctat 45660460  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaa---attcttatgttttagttt 230  Q
    ||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||    
T  45660461 aaaacttttttcaaagaaaacacaaaaaactatactccaaattattcttatgttttagttt 45660521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 73 - 226
Target Start/End: Original strand, 11617020 - 11617173
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||| ||||| |||||| | ||||||||||||||||||||||||||||||||||||| |||    
T  11617020 ttattttcataaaataaaatgcaaatttcattcaattttctctctcttttatttttactataaccaatagccaatgaaaattgtttttacatcttcctat 11617119  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 226  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  11617120 aaaacttttttcaaagaaaataccaaaaactatactccaaattcttatgtttta 11617173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 33198795 - 33198638
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||| |||||||||||||||||||| |||    
T  33198795 ttattctcatagaattaaatgcaaattacattcaattttctctctctttcattttctccataaccaataaccaatcaaaattgtttttacatcttcctat 33198696  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||| ||| |||||||||||||||||||| | ||||||||||||| |||||||||    
T  33198695 aaaacttcttttaaagaaaacacaaaaaactagagtccaaattcttatattttagttt 33198638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 28858305 - 28858465
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||| ||||||||||||  |||    
T  28858305 ttattctcataaaattaaatgcaaattacattcaattttctctctctttcatttttacaataaccaatagccaatgaaaattatttttacatctttctat 28858404  T
Q  173 aaaacttttttcaaagaaaacacaaaaaacta---tactccaaattcttatgttttagttt 230  Q
    ||||||||||||||||||||||||||||||||   || |  ||||||||||||||||||||    
T  28858405 aaaacttttttcaaagaaaacacaaaaaactactatattttaaattcttatgttttagttt 28858465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 73 - 219
Target Start/End: Original strand, 14873958 - 14874105
Alignment:
Q  73 ttattctcataaaattaaa-tgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttctta 171  Q
    ||||||||||| ||||||| ||||||||||||| |||||| ||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||    
T  14873958 ttattctcatataattaaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattatttttacatcttccta 14874057  T
Q  172 taaaacttttttcaaagaaaacacaaaaaactatactccaaattctta 219  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||    
T  14874058 taaaacttttttcaaagaaaacacaaaaaactatactccaaactctta 14874105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 12938238 - 12938395
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||| |||||||||||||||||||||||  ||| ||| ||||| ||||| ||||||| |||||||||||||||||||||||||||  ||| |||    
T  12938238 ttattctcatgaaattaaatgcaaattacattcatatttatctctcttttattttctccataatcaatagccaatgaaaattgtttttacactttcctat 12938337  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  12938338 aaaacttatttcaaagaaagcacaaaaaactatactccaaattcttatgttttagttt 12938395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 29524205 - 29524048
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||  ||    
T  29524205 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttattttttccataaccaattgccaatgaaaattgtttttacatcttcccat 29524106  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
     |||||| || |||||||||||||||||| ||| || |||||||||||| ||||||||    
T  29524105 gaaacttattccaaagaaaacacaaaaaattatgctacaaattcttatgctttagttt 29524048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 25572042 - 25572198
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||| ||||||||||||||||||||| |||||||||| |||| |||||| ||||||||||||| ||||||||||||||||||||||||||  ||    
T  25572042 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttccatttt-tccataaccaatatccaatgaaaattgtttttacatcttcccat 25572140  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
     |||||| || |||||||||||||||||||||| || |||||||||||| ||||||||    
T  25572141 gaaacttattccaaagaaaacacaaaaaactatgctacaaattcttatgctttagttt 25572198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 76 - 230
Target Start/End: Original strand, 8701601 - 8701755
Alignment:
Q  76 ttctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaa 175  Q
    ||||||| ||||||||| |||||| |||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||  || ||    
T  8701601 ttctcatgaaattaaatacaaatttcatttaattttctctctcttccattttttccataaccaatagccaatgaaaattgtttttacatcttcccatgaa 8701700  T
Q  176 acttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||| || ||||||||||| |||||||||| || |||||| ||||||||||||||    
T  8701701 acttattccaaagaaaacataaaaaactatgctacaaatttttatgttttagttt 8701755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 24204693 - 24204536
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||| | |||||||| |||||| |||||||||||||| |||| |||||| | ||||||||||||||||||||||||| |||||||| ||| |||    
T  24204693 ttattctcatgatattaaatgtaaattatattcaattttctctctcttccattttcttcataaccaatagccaatgaaaattgattttacatattcctat 24204594  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||| || |||||||||||||| ||| ||||||||||||||||| ||||||||||    
T  24204593 aaaacttattccaaagaaaacacaataaattatactccaaattcttaggttttagttt 24204536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 9864881 - 9864725
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||| |||||||||||||||||||||||||||| |||  ||| |||||| ||||||| |||| ||||||||||||||||||||| |||||  ||    
T  9864881 ttattctcatgaaattaaatgcaaattacattcaattttatct--cttccattttctccataatcaattgccaatgaaaattgtttttacctcttcccat 9864784  T
Q  173 aaaacttttttcaaagaaaacacaa-aaaactatactccaaattcttatgttttagttt 230  Q
     |||||| || |||||||||||||| |||||||||||||||||||||||||||||||||    
T  9864783 gaaacttattccaaagaaaacacaaaaaaactatactccaaattcttatgttttagttt 9864725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 73 - 226
Target Start/End: Complemental strand, 6766098 - 6765944
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttttt-ccataaccaatagccaatgaaaattgtttttacatcttctta 171  Q
    |||||||||| |||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||||||| |||| |||||||||||||||||||| ||    
T  6766098 ttattctcattaaattaaatgtaaattacattcaattttctctctcttccatttttttccataaccaatagtcaataaaaattgtttttacatcttccta 6765999  T
Q  172 taaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 226  Q
    ||||| || || ||| ||||||| ||||||||||||| |||||| ||||||||||    
T  6765998 taaaatttattccaatgaaaacataaaaaactatacttcaaatttttatgtttta 6765944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 73 - 199
Target Start/End: Complemental strand, 40584562 - 40584436
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||| |||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||||| | ||||||||||||||||||||||||||  ||    
T  40584562 ttattttcatgaaattaaatgcaaattacattcaattttctctctctttcatttttcccataaccaacaaccaatgaaaattgtttttacatcttcccat 40584463  T
Q  173 aaaacttttttcaaagaaaacacaaaa 199  Q
    ||||||| ||  |||||||||||||||    
T  40584462 aaaacttattctaaagaaaacacaaaa 40584436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 33677479 - 33677636
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||| ||||||||||| ||| |||||||||||||| | ||||  ||||| |||||||||||||| ||||||||||||||||||||||||| |||    
T  33677479 ttattctcatgaaattaaatgctaataacattcaattttctttctcttcaattttctccataaccaatagtcaatgaaaattgtttttacatcttcctat 33677578  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||||||  |  ||| |||||| |||||||||| || |||||| ||||||||||||||    
T  33677579 aaaacttagtaaaaaaaaaacataaaaaactattcttcaaatttttatgttttagttt 33677636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 5963197 - 5963353
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||| || | |||||||||||||||||||||||||||||| |||| |||||| | ||||||||||||||||| |||||| |||||||||| ||  ||    
T  5963197 ttattcttatgacattaaatgcaaattacattcaattttctctctcttccattttcttcataaccaatagccaataaaaattatttttacatc-tcccat 5963295  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||| ||  ||||||||||||||||| || |||| |||||||||| |||||||||    
T  5963296 aaaacttattctaaagaaaacacaaaaaattagactctaaattcttatattttagttt 5963353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 73 - 226
Target Start/End: Complemental strand, 30830760 - 30830607
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||| |||||||||||||||||||| ||||||||||| | ||||||||| || |||| ||||| ||||||||| || |||||| ||||||| ||    
T  30830760 ttattctcatgaaattaaatgcaaattacatacaattttctctctttttcattttctcaataatcaataaccaatgaaatttttttttaaatcttctcat 30830661  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 226  Q
     |||||| ||||||| ||||||||||||   ||||||||| |||||||||||||    
T  30830660 gaaacttatttcaaaaaaaacacaaaaagacatactccaatttcttatgtttta 30830607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 98 - 229
Target Start/End: Complemental strand, 35115943 - 35115811
Alignment:
Q  98 ttacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactt-ttttcaaagaaaacaca 196  Q
    ||||||||||||||| || |||| |||||| ||||||||||||| | |||||||||||||||||||||||  |||||||||| ||   ||| ||||||||    
T  35115943 ttacattcaattttcactctcttccattttctccataaccaataacaaatgaaaattgtttttacatctttctataaaacttattaaaaaaaaaaacaca 35115844  T
Q  197 aaaaactatactccaaattcttatgttttagtt 229  Q
    |||||||||||||||||||||||||||||||||    
T  35115843 aaaaactatactccaaattcttatgttttagtt 35115811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 7645394 - 7645234
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttcttt---cattttttccataaccaatagccaatgaaaattgtttttacatcttct 169  Q
    |||||||||| |||||||||||||||||||||||||||||||| |  ||   |||||| |||||||  ||||||||||||||||||||||||||| |||     
T  7645394 ttattctcatgaaattaaatgcaaattacattcaattttctctataattaaccattttctccataattaatagccaatgaaaattgtttttacatgttcc 7645295  T
Q  170 tataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
     || ||| || ||  || |||||||||||| | ||||||||||||||||||||||||||||    
T  7645294 catgaaatttattctaaggaaaacacaaaatattatactccaaattcttatgttttagttt 7645234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 77 - 230
Target Start/End: Original strand, 35022897 - 35023051
Alignment:
Q  77 tctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaata--gccaatgaaaattgtttttacatcttcttataa 174  Q
    |||||| ||||||||||||||||  |||||||||||||| |||  |||||| ||| ||| |||||  || |||||||||||||||||||||||| ||| |    
T  35022897 tctcattaaattaaatgcaaattgtattcaattttctctctctaccattttctccttaaacaatatagcaaatgaaaattgtttttacatcttcctatga 35022996  T
Q  175 aacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||||  | |||| ||||||||||||| ||||||||||||||||||||||||||||    
T  35022997 aacttactccaaa-aaaacacaaaaaattatactccaaattcttatgttttagttt 35023051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 144 - 230
Target Start/End: Original strand, 43415468 - 43415554
Alignment:
Q  144 caatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||| ||||||||||| |||||||||    
T  43415468 caatgaaaattgtttttacatcttcctataaaactttttttaaagaaaacacaaaaaattatacttcaaattcttatattttagttt 43415554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 44454987 - 44455142
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||| ||||||||||||||||||||||||||||  || |||| |||||| || |||| ||||||||||||  |||| ||||||| | |||  ||    
T  44454987 ttattctcatgaaattaaatgcaaattacattcaatttttcctctcttccattttctctataatcaatagccaatg--aattttttttacgttttcccat 44455084  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
     |||||| ||  ||| |||||||||||||||||||||||||||| ||| |||||||||    
T  44455085 gaaacttattcaaaataaaacacaaaaaactatactccaaattcatatattttagttt 44455142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 205
Target Start/End: Original strand, 26998323 - 26998445
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| | |||||||||| |||| | ||||||||| || |||| |||   |||||||||||||||||||||||||| |||||||||| ||    
T  26998323 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatt 26998422  T
Q  183 tcaaagaaaacacaaaaaactat 205  Q
    | ||||| |||||||||||||||    
T  26998423 ttaaagataacacaaaaaactat 26998445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 73 - 183
Target Start/End: Complemental strand, 30421346 - 30421236
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||  | ||  ||||  | || ||||||||||||||||||||||||    
T  30421346 ttattcttataaaattaaatgtaaattacatttaattttctctttctttcatttttttaaaaattaataatcgataaaaattgtttttacatcttcttat 30421247  T
Q  173 aaaactttttt 183  Q
    |||||||||||    
T  30421246 aaaactttttt 30421236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 101 - 230
Target Start/End: Complemental strand, 40808853 - 40808727
Alignment:
Q  101 cattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaa 200  Q
    |||| ||||||||||  |||| ||||||||| |||||||| || ||||||||||||||||||||||||  || |||||| || |||||||||||||||||    
T  40808853 catttaattttctct--cttttattttttccctaaccaattgctaatgaaaattgtttttacatcttcc-atgaaacttattccaaagaaaacacaaaaa 40808757  T
Q  201 actatactccaaattcttatgttttagttt 230  Q
    ||||| || |||||||||||| ||||||||    
T  40808756 actatgctacaaattcttatgctttagttt 40808727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 206
Target Start/End: Original strand, 32010108 - 32010231
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| | |||| ||||| |||| | ||||||||| || |||| |||   |||||||||||| ||||||||||||| |||||||||| ||    
T  32010108 aaaattaaatgcaaagtgcatttaatttgctctctttttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatt 32010207  T
Q  183 tcaaagaaaacacaaaaaactata 206  Q
    ||||||| ||||||||||||||||    
T  32010208 tcaaagataacacaaaaaactata 32010231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 83 - 205
Target Start/End: Original strand, 32273677 - 32273799
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||| ||| | |||||||||| |||| | ||||||||| || |||| |||   ||||||||||||||||||| |||||| |||||||||| ||    
T  32273677 aaaattaaatgtaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttatatcttcctataaaacttatt 32273776  T
Q  183 tcaaagaaaacacaaaaaactat 205  Q
    ||||||| |||||||||||||||    
T  32273777 tcaaagataacacaaaaaactat 32273799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 90 - 205
Target Start/End: Original strand, 9709526 - 9709641
Alignment:
Q  90 aatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaaga 189  Q
    |||||||||| ||||||||||  ||| ||||||||||| || |||| ||||| | ||||||||||||||| |||||||| |||||||||| |||||| ||    
T  9709526 aatgcaaattgcattcaatttgttctctctttcattttctcaataatcaataacaaatgaaaattgttttcacatcttcctataaaacttgtttcaagga 9709625  T
Q  190 aaacacaaaaaactat 205  Q
     ||||||| |||||||    
T  9709626 taacacaagaaactat 9709641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 205
Target Start/End: Original strand, 38071002 - 38071123
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||| ||| | |||||||||| |||| | ||||||||| || |||| |||   |||||||||||||||||||||||||| | |||||||| ||    
T  38071002 aaaattaaatgtaaagtgcattcaatttgctctat-tttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctgtaaaacttatt 38071100  T
Q  183 tcaaagaaaacacaaaaaactat 205  Q
    ||||||| |||||||||||||||    
T  38071101 tcaaagataacacaaaaaactat 38071123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 73 - 159
Target Start/End: Complemental strand, 39696963 - 39696877
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttt 159  Q
    |||||||||  ||||||||||||||||||||| ||||||||||||||| |||||| || || | ||||||| |||||||||||||||    
T  39696963 ttattctcacgaaattaaatgcaaattacatttaattttctctttcttccattttctctatgatcaatagctaatgaaaattgtttt 39696877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 75 - 214
Target Start/End: Original strand, 4707419 - 4707558
Alignment:
Q  75 attctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataa 174  Q
    |||||| |||||||||||| ||||| |||||||| | ||| | || || ||||||| || |  |||| ||||||||||||||||| ||||||||   | |    
T  4707419 attctcgtaaaattaaatgtaaattgcattcaatgtgctcctcctctccttttttctatgatgaataaccaatgaaaattgttttaacatcttcccgtta 4707518  T
Q  175 aacttttttcaaagaaaacacaaaaaactatactccaaat 214  Q
    ||||| ||  || |||||||||||||||||||||||||||    
T  4707519 aacttattctaaggaaaacacaaaaaactatactccaaat 4707558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 83 - 201
Target Start/End: Complemental strand, 4891793 - 4891675
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||| ||| | |||||||| | |||| | ||||||||| |  |||| |||   ||||| |||||||||||||||||||| |||||||||| ||    
T  4891793 aaaattaaatgtaaagtgcattcaatctgctctctttttcattttctttataatcaactaccaataaaaattgtttttacatcttcctataaaacttatt 4891694  T
Q  183 tcaaagaaaacacaaaaaa 201  Q
    ||||||| |||||||||||    
T  4891693 tcaaagataacacaaaaaa 4891675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 5280642 - 5280592
Alignment:
Q  102 attcaattttctctttctttcattttttccataaccaatagccaatgaaaa 152  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  5280642 attcaattttctctctctttcattttttccataaccaatagccaatgaaaa 5280592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 83 - 205
Target Start/End: Original strand, 20380129 - 20380251
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| | |||||||||| ||||   ||||||||| || |||| |||   ||||||||  || ||||||||| ||| |||||||||| ||    
T  20380129 aaaattaaatgcaaagtgcattcaatttgctctcgttttcattttctctataatcaactaccaatgaattttttttttacattttcctataaaacttatt 20380228  T
Q  183 tcaaagaaaacacaaaaaactat 205  Q
    ||||||| |||||||||||||||    
T  20380229 tcaaagataacacaaaaaactat 20380251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 83 - 230
Target Start/End: Original strand, 44442137 - 44442285
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| | |||||||||| || | | ||||||||| || |||| |||    ||||||||||||||||||||||||| ||||||| || ||    
T  44442137 aaaattaaatgcaaagtgcattcaatttgctatctttttcattttctctataatcaactatcaatgaaaattgtttttacatcttcatataaaatttatt 44442236  T
Q  183 tcaaagaaaacacaaa-aaactatactccaaattcttatgttttagttt 230  Q
    | ||| | |||||||| |||||||  | |||| | ||||||||||||||    
T  44442237 ttaaaaataacacaaataaactatgttacaaactattatgttttagttt 44442285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 83 - 179
Target Start/End: Complemental strand, 8032823 - 8032726
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttc-tttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactt 179  Q
    ||||||||||||||| | |||||||||| |||| || ||||||||| || ||||| |  | ||||| |||||||||||||||||||| ||||||||||    
T  8032823 aaaattaaatgcaaaatgcattcaatttgctctctcctttcattttctcaataactagcaaccaataaaaattgtttttacatcttcctataaaactt 8032726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 83 - 205
Target Start/End: Complemental strand, 11031077 - 11030962
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| | |||||||||| |||| ||||||||||| || ||||||||||       ||||||||||||| |||||  |||||||||| ||    
T  11031077 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataaccaata-------aaaattgtttttatatctttctataaaacttatt 11030985  T
Q  183 tcaaagaaaacacaaaaaactat 205  Q
    | ||||| || |||| |||||||    
T  11030984 ttaaagataagacaagaaactat 11030962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 230
Target Start/End: Complemental strand, 5280595 - 5280537
Alignment:
Q  173 aaaacttttttcaaagaaaacacaaaaaa-ctatactccaaattcttatgttttagttt 230  Q
    |||||||||| | |||||||||||||||| ||||| |||||||||||||||||||||||    
T  5280595 aaaactttttcccaagaaaacacaaaaaaactatagtccaaattcttatgttttagttt 5280537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 189
Target Start/End: Complemental strand, 16495019 - 16494974
Alignment:
Q  144 caatgaaaattgtttttacatcttcttataaaacttttttcaaaga 189  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||    
T  16495019 caatgaaaattgtttttacatcttcctataaaacttatttcaaaga 16494974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 19264008 - 19264045
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatctt 55  Q
    ||||||||||||||||||||||||||||||||||||||    
T  19264008 gtcccaaaatataagcaaaaaagacaaacttttatctt 19264045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 123 - 230
Target Start/End: Original strand, 32428019 - 32428127
Alignment:
Q  123 attttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt-tcaaagaaaacacaaaaaactatactccaaattcttatg 221  Q
    ||||| ||| ||| |||||| ||||||||||| ||||||||| ||   || |||||| || | ||| ||||||| ||  |||||||||||||||||||||    
T  32428019 attttctccgtaatcaatagtcaatgaaaattatttttacatgtttccatgaaacttattataaaaaaaaacaccaaggactatactccaaattcttatg 32428118  T
Q  222 ttttagttt 230  Q
    |||||||||    
T  32428119 ttttagttt 32428127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 3201276 - 3201314
Alignment:
Q  19 tcccaaaatataagcaaaaaagacaaacttttatctttt 57  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  3201276 tcccaaaatataagcaaaaaagacaaactattatctttt 3201314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 167
Target Start/End: Complemental strand, 18834065 - 18833980
Alignment:
Q  82 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctt 167  Q
    |||||||||||||||||| ||||||||||  |||   ||| ||||| |||||||  | || ||||||| |||||||||||||||||    
T  18834065 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataataattaaccaatgataattgtttttacatctt 18833980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 5280732 - 5280697
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatc 53  Q
    |||||||||||||||||||||||||||| |||||||    
T  5280732 gtcccaaaatataagcaaaaaagacaaatttttatc 5280697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 33198886 - 33198851
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatc 53  Q
    |||||||||||||||||||||||||||| |||||||    
T  33198886 gtcccaaaatataagcaaaaaagacaaaattttatc 33198851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 38070924 - 38070959
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatc 53  Q
    |||||||| |||||||||||||||||||||||||||    
T  38070924 gtcccaaattataagcaaaaaagacaaacttttatc 38070959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 45660271 - 45660306
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatc 53  Q
    |||||||||||||||||||||| |||||||||||||    
T  45660271 gtcccaaaatataagcaaaaaaaacaaacttttatc 45660306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 25571953 - 25571987
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttat 52  Q
    |||||||||||||||||||||| ||||||||||||    
T  25571953 gtcccaaaatataagcaaaaaaaacaaacttttat 25571987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 29524292 - 29524258
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttat 52  Q
    ||||||||||||||| |||||||||||||||||||    
T  29524292 gtcccaaaatataagtaaaaaagacaaacttttat 29524258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 40808964 - 40808930
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttat 52  Q
    |||||||||||||||||||||||||||| ||||||    
T  40808964 gtcccaaaatataagcaaaaaagacaaatttttat 40808930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 147; Significance: 2e-77; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 18 - 230
Target Start/End: Original strand, 77897 - 78110
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnngtt-attctcataaaattaaatgcaaattacattcaattttctctt 116  Q
    |||||||||||||||||||||||||||||||||||||||| |||          ||| ||||||||||||||||||| |||||||||||||||||| |||    
T  77897 gtcccaaaatataagcaaaaaagacaaacttttatctttttcaagattttttttgtttattctcataaaattaaatgtaaattacattcaattttcactt 77996  T
Q  117 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 216  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||    
T  77997 tctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctatacaacttttttcaaagaaaacacaaaaaactatactctaaattc 78096  T
Q  217 ttatgttttagttt 230  Q
    ||||||||||||||    
T  78097 ttatgttttagttt 78110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 147; Significance: 2e-77; HSPs: 94)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 18 - 230
Target Start/End: Complemental strand, 23311773 - 23311560
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaa-annnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctt 116  Q
    ||||||||||||||||||||||| |||||||||||||||| ||| |         |||||||||||||||||||||| | ||||||||||||||||||||    
T  23311773 gtcccaaaatataagcaaaaaagtcaaacttttatctttttcaagatttttttttgttattctcataaaattaaatgtatattacattcaattttctctt 23311674  T
Q  117 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||     
T  23311673 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacacaaaactatactctaaattt 23311574  T
Q  217 ttatgttttagttt 230  Q
    ||||||||||||||    
T  23311573 ttatgttttagttt 23311560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 18 - 230
Target Start/End: Complemental strand, 37042597 - 37042384
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaa-annnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctt 116  Q
    ||||||||||||||| |||||||||||| ||| ||||||||||| |         |||||||||||||||||||||||||||||||||||||||||||||    
T  37042597 gtcccaaaatataaggaaaaaagacaaattttaatcttttccaagatttttttttgttattctcataaaattaaatgcaaattacattcaattttctctt 37042498  T
Q  117 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 216  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||     
T  37042497 tctttcattttttccataatcaatagccaatgaaaattgtttttacatcttcctataaaactttttccaacgaaaacacaaaaaactatactccaaattt 37042398  T
Q  217 ttatgttttagttt 230  Q
    ||||||||||||||    
T  37042397 ttatgttttagttt 37042384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 18 - 230
Target Start/End: Complemental strand, 11054488 - 11054278
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaa-annnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctt 116  Q
    |||||||||||||||||||||||||||||||||||||||||||| |         |||||||||||||||||||||||||||||||||||||||||||||    
T  11054488 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaagatttttttttgttattctcataaaattaaatgcaaattacattcaattttctctt 11054389  T
Q  117 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttttt-caaagaaaacacaaaaaactatactccaaatt 215  Q
    ||    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  11054388 tc----attttttccataaccaatagccaatgaaaattgtttttaaatcttcctataaaacttttttccaaagaaaacacaaaaaactatactccaaatt 11054293  T
Q  216 cttatgttttagttt 230  Q
    ||||| |||||||||    
T  11054292 cttatattttagttt 11054278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 72 - 226
Target Start/End: Original strand, 30189569 - 30189724
Alignment:
Q  72 gttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttt-ttccataaccaatagccaatgaaaattgtttttacatcttctt 170  Q
    ||||||||| |||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  30189569 gttattctcgtaaaattaaatgtaaattacattcaatattctctttctttcatttttttccataaccaatagccaatgaaaattgtttttacatcttcct 30189668  T
Q  171 ataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30189669 ataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 30189724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 14752332 - 14752175
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  14752332 ttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagtcaatgaaaattgtttttacatcttcctat 14752233  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||  ||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  14752232 aaatttttttccaaagaaaacacaaaaaattatactccaaattcttatgttttagttt 14752175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 28875406 - 28875563
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  28875406 ttattctcataaaattaaatacaaattacattcaattttctttttctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcttat 28875505  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||||||||| ||||||||||||||| ||||||| |||||||||||||| ||||||||    
T  28875506 aaaactttttccaaagaaaacacaaataactatagtccaaattcttatgctttagttt 28875563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 7866607 - 7866450
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||||||||||||| ||||||||||||||||||| | ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  7866607 ttattctcataaaattaaatgaaaattacattcaattttctatctcttttattttttccataaccaatagtcaatgaaaattgtttttacatcttcttat 7866508  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||    
T  7866507 aaaacttttttcaaagaaaataaaaaaaactatactctaaattcttatgttttagttt 7866450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 50651161 - 50651004
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||| ||||||||||||||||||||||||| |||    
T  50651161 ttattctcataaaattaaatgcaaattacattcaattttctctctcttttattttctccataaccaatagtcaatgaaaattgtttttacatcttcctat 50651062  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||    
T  50651061 aaaactttttgcaaagaaaacacaaaaaactatatttcaaattcttatgttttagttt 50651004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 73 - 219
Target Start/End: Original strand, 6438083 - 6438229
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||||||||||||||||||||||||| |||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  6438083 ttattctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcctat 6438182  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattctta 219  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||    
T  6438183 aaagcttttttcaaagaaaacacaaaaaactatactccaaattctta 6438229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 18 - 230
Target Start/End: Original strand, 36546486 - 36546699
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnngtt-attctcataaaattaaatgcaaattacattcaattttctctt 116  Q
    ||||||||||||||||||||||||||||||||| |||||| |||          ||| |||||||||||||||||||||||||||||| |||| |||||     
T  36546486 gtcccaaaatataagcaaaaaagacaaacttttgtctttttcaagattctttttgtttattctcataaaattaaatgcaaattacattaaattctctctc 36546585  T
Q  117 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 216  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||| ||| ||||||||| ||||||||| |||||||||||||||| |||||     
T  36546586 tctttcattttttctataaccaatagccaatgaaaattggttttacatcttcctatgaaactttttccaaagaaaatacaaaaaactatactctaaattt 36546685  T
Q  217 ttatgttttagttt 230  Q
    ||||||||||||||    
T  36546686 ttatgttttagttt 36546699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 18 - 230
Target Start/End: Complemental strand, 36561829 - 36561616
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnngtt-attctcataaaattaaatgcaaattacattcaattttctctt 116  Q
    ||||||||||||||||||||||||||||||||| |||||| |||          ||| |||||||||||||||||||||||||||||| |||| |||||     
T  36561829 gtcccaaaatataagcaaaaaagacaaacttttgtctttttcaagattctttttgtttattctcataaaattaaatgcaaattacattaaattctctctc 36561730  T
Q  117 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 216  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||| ||| ||||||||| ||||||||| |||||||||||||||| |||||     
T  36561729 tctttcattttttctataaccaatagccaatgaaaattggttttacatcttcctatgaaactttttccaaagaaaatacaaaaaactatactctaaattt 36561630  T
Q  217 ttatgttttagttt 230  Q
    ||||||||||||||    
T  36561629 ttatgttttagttt 36561616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 47864191 - 47864348
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| |||||| ||||||||||||||||||||||||| |||    
T  47864191 ttattctcataaaattaaatgcaaattacattcaattttttctctctttcatttttttcataatcaatagtcaatgaaaattgtttttacatcttcctat 47864290  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||    
T  47864291 aaaacttttttcaaagaaaatgcaaaaaactatactccaaattctcatgttttagttt 47864348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 35963152 - 35963309
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||||||||||||||||||| |||| |||||||||| ||||||||||| ||||||||||||| ||||| |||||||||||| ||||||| |||    
T  35963152 ttattctcataaaattaaatgcaaattgcatttaattttctctctctttcattttctccataaccaataaccaataaaaattgtttttccatcttcctat 35963251  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  35963252 aaaactttttccaaacaaaacacaaaaaactatactccaaattcttatgttttagttt 35963309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 46711781 - 46711625
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||| |||||||||||||| |||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||    
T  46711781 ttattttcataaaattaaatacaaattacattcaaatttctctctctttcattttttc-ataaccaatagccaatgaatattgtttttacatcttcctat 46711683  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  46711682 aaaacttttttcaaagaaaacacaaaaaattatactccaaattcttatgttttcgttt 46711625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 77 - 230
Target Start/End: Complemental strand, 579258 - 579112
Alignment:
Q  77 tctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaa 176  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  579258 tctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttatatcttcctataaaa 579159  T
Q  177 cttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||||||||||||||||||||||||       ||||||||||||||||||||||    
T  579158 cttttttcaaagaaaacacaaaaaa-------ccaaattcttatgttttagttt 579112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 6075081 - 6075238
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||| ||||| | |    
T  6075081 ttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttgcataaccaatggccaatgaaaattgtttttacttcttcctgt 6075180  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    || ||||||| |||||||||||||||||| ||||||||||||||||||  ||||||||    
T  6075181 aacactttttccaaagaaaacacaaaaaattatactccaaattcttatactttagttt 6075238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 37074958 - 37075117
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttcttt--cattttttccataaccaatagccaatgaaaattgtttttacatcttctt 170  Q
    ||||||||||||||||||||||||||||||||||||||| ||  |||||  ||||||||| ||||||||||||||||||||||||| ||||||||||| |    
T  37074958 ttattctcataaaattaaatgcaaattacattcaattttatcgctctttttcattttttctataaccaatagccaatgaaaattgtgtttacatcttcct 37075057  T
Q  171 ataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||    
T  37075058 ataaaactttttccaaagaaaacacaaaaaattatacttcaaattcttatgttttagttt 37075117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 73 - 224
Target Start/End: Original strand, 53270233 - 53270386
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttct--ctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttctt 170  Q
    |||||||||||||||||||| ||||||||||||||||||||  || |||||||||||||||||||||||||| ||||||||||| ||||| ||||||  |    
T  53270233 ttattctcataaaattaaatacaaattacattcaattttctttctctctttcattttttccataaccaataggcaatgaaaattattttttcatctttct 53270332  T
Q  171 ataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttt 224  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53270333 atgaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttt 53270386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 54465019 - 54464863
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||    
T  54465019 ttattctcataaaattaaacgcaaattacattcaattttctctctctttcactttttccataaccaatagccaacgaaaattgtttttacatcttcctat 54464920  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
     ||  |||||| ||||||||||||||||| |||||| |||||||||||||||||||||    
T  54464919 -aatttttttttaaagaaaacacaaaaaattatacttcaaattcttatgttttagttt 54464863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 19464075 - 19464234
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||||| | ||||||||||||||||||| ||| ||| |||||||||||| ||||||||||||   ||||||||||||||||  |||||| |||    
T  19464075 ttattctcataaactgaaatgcaaattacattcaactttttctctctttcatttttcccataaccaataataaatgaaaattgtttttcaatcttcctat 19464174  T
Q  173 aaaacttttttcaaagaaaacacaaaaaac--tatactccaaattcttatgttttagttt 230  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  19464175 aaaacttttttcaaagaaaacacaaaaaactatatactccaaattcttatgttttagttt 19464234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 73 - 223
Target Start/End: Complemental strand, 32619954 - 32619804
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |  || ||| |||||||||||||||||||||||||| |||||||||||||||||    
T  32619954 ttattctaataaaattaaatgcaaattacattcaattttctctctatcccaatttctccataaccaatagccaatgaaaattatttttacatcttcttat 32619855  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtt 223  Q
    ||||| | || |||||||||||||||| | ||||||||||||||| |||||    
T  32619854 aaaacctattccaaagaaaacacaaaatattatactccaaattctcatgtt 32619804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 50730109 - 50730266
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||| |||||||||||| ||||||||||||||||||||| | ||| |||||||||||||||||||| ||||| |  || ||||||||||||| |||    
T  50730109 ttattctcttaaaattaaatgtaaattacattcaattttctctcttttttattttttccataaccaatagtcaatg-attttttttttacatcttcctat 50730207  T
Q  173 aaaacttttttcaaagaaaacac-aaaaaactatactccaaattcttatgttttagttt 230  Q
    |||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||    
T  50730208 aaaactttttccaaagaaagcacaaaaaaactatactccaaattcttatgttttagttt 50730266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 50782745 - 50782588
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||| |||||||||||| ||||||||||||||||||||| | ||| |||||||||||||||||||| ||||| |  || ||||||||||||| |||    
T  50782745 ttattctcttaaaattaaatgtaaattacattcaattttctctcttttttattttttccataaccaatagtcaatg-attttttttttacatcttcctat 50782647  T
Q  173 aaaacttttttcaaagaaaacac-aaaaaactatactccaaattcttatgttttagttt 230  Q
    |||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||    
T  50782646 aaaactttttccaaagaaagcacaaaaaaactatactccaaattcttatgttttagttt 50782588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 2927289 - 2927447
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||| ||||||||| ||||||||||| |||||||||| ||||  ||||||| |||||||||||||||||||||||| |||||||||||||  ||    
T  2927289 ttattctcatgaaattaaatacaaattacatttaattttctctctcttctatttttttcataaccaatagccaatgaaaattatttttacatcttcccat 2927388  T
Q  173 aaaacttttttcaaagaaaacac-aaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||| || ||||||||| || |||||||||| || |||||||||||||||||||||    
T  2927389 aaaacttattccaaagaaaatacaaaaaaactatgctacaaattcttatgttttagttt 2927447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 73 - 225
Target Start/End: Complemental strand, 41476453 - 41476308
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||||||||||||||||||||| |||||||||||| |  |||||||||||||| ||       ||||||||||||| ||||||||||||  |||    
T  41476453 ttattctcataaaattaaatgcaaattagattcaattttctttccctttcattttttcccta-------gccaatgaaaattatttttacatctttctat 41476361  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttt 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  41476360 aaaacttttttcaaagaaaacacaaaaaactatactccaaatttttatgtttt 41476308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 8703109 - 8703262
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||||||||||||||||||||||||| |||||||| | ||||||| ||||||||||| |||||||||||| ||||||||||||||||||| |||    
T  8703109 ttattctcataaaattaaatgcaaattacattaaattttctttctctttca-tttttccataatcaatagccaatg-aaattgtttttacatcttcctat 8703206  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
     ||| ||||||| || || |||| ||||||||||||||||||||||||||||||||||    
T  8703207 -aaatttttttccaaaaacacac-aaaaactatactccaaattcttatgttttagttt 8703262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 9054996 - 9055149
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||||||||||||||||||||||||| |||||||| | ||||||| ||||||||||| |||||||||||| ||||||||||||||||||| |||    
T  9054996 ttattctcataaaattaaatgcaaattacattaaattttctttctctttca-tttttccataatcaatagccaatg-aaattgtttttacatcttcctat 9055093  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
     ||| ||||||| || || |||| ||||||||||||||||||||||||||||||||||    
T  9055094 -aaatttttttccaaaaacacac-aaaaactatactccaaattcttatgttttagttt 9055149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 26208014 - 26208171
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||||| | |||||| ||||||||||||||||||||||||| |||||| |||| ||  ||||||||||||||||||||||||||||||   ||    
T  26208014 ttattctcataaattcaaatgccaattacattcaattttctctttcttccattttctccacaataaatagccaatgaaaattgtttttacatcttaccat 26208113  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
     |||||| || || | ||||||||||||||||||||| ||||||||||||||||||||    
T  26208114 gaaacttattccagacaaaacacaaaaaactatactctaaattcttatgttttagttt 26208171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 26725115 - 26724958
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||| |||||| |||||||||||||||| |||| ||| ||||  ||||| ||||||| ||||| ||||||||||||||||||||||||||| |     
T  26725115 ttattctcatgaaattatatgcaaattacattcagttttatctctcttctattttctccataatcaataaccaatgaaaattgtttttacatcttctcag 26725016  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||| || |||||||||||||||||| |||||| ||||||||||| |||||||||    
T  26725015 aaaacttattccaaagaaaacacaaaaaattatacttcaaattcttatattttagttt 26724958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 74 - 226
Target Start/End: Complemental strand, 20847391 - 20847240
Alignment:
Q  74 tattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttata 173  Q
    ||||||||||||||||||||||||||||||||||||||  || ||||||||||| ||||||| ||||  ||||||||||||||||  |||||||| |||     
T  20847391 tattctcataaaattaaatgcaaattacattcaatttttcctctctttcattttctccataatcaattaccaatgaaaattgtttgcacatcttcctatg 20847292  T
Q  174 aaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttta 226  Q
    |||||| || ||||||||||||| |||| ||||||||||||||||||||||||    
T  20847291 aaacttattccaaagaaaacaca-aaaattatactccaaattcttatgtttta 20847240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 29235193 - 29235344
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||| |||| |||||||||| ||||||||||||||      | |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  29235193 ttattatcattaaattaaatgtaaattacattcaat------tctctttcattttttccataaccaatagccaatgaaaattatttttacatcttcctat 29235286  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
     |||| ||||  |||||||| |||||||||||||||| ||||||||||||||||||||    
T  29235287 taaacgttttctaaagaaaatacaaaaaactatactctaaattcttatgttttagttt 29235344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 132 - 230
Target Start/End: Original strand, 9264610 - 9264708
Alignment:
Q  132 ataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  9264610 ataacgaatagccaatgaaaattgtttttacatcttcatataaaacttttttcaaagaaaacacaaaaaactatactcaaaattcatatgttttagttt 9264708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 78 - 179
Target Start/End: Complemental strand, 34722724 - 34722623
Alignment:
Q  78 ctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaac 177  Q
    |||||||||||||||| |||||||||||||||||||||   ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  34722724 ctcataaaattaaatgtaaattacattcaattttctctccttttcattttttgcataaccaatagccaatgaaaattgtttttacatcttcttataaaac 34722625  T
Q  178 tt 179  Q
    ||    
T  34722624 tt 34722623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 126 - 226
Target Start/End: Complemental strand, 23910584 - 23910484
Alignment:
Q  126 ttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgtttt 225  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||    
T  23910584 ttttccataaccaatagccaatgaaaattatttttacatcttcctataaaactttttacaaagaaaacacaaaaagctatactctaaattcttatgtttt 23910485  T
Q  226 a 226  Q
    |    
T  23910484 a 23910484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 120 - 230
Target Start/End: Original strand, 31836966 - 31837076
Alignment:
Q  120 ttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattctta 219  Q
    |||||||| |||| ||||||||| ||||||||||||||||| ||| ||| ||||||||||||| ||||||||| ||||||||||||||||||| ||||||    
T  31836966 ttcattttctccacaaccaatagtcaatgaaaattgtttttgcatattcctataaaactttttccaaagaaaatacaaaaaactatactccaacttctta 31837065  T
Q  220 tgttttagttt 230  Q
    |||||||||||    
T  31837066 tgttttagttt 31837076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 73 - 201
Target Start/End: Original strand, 3972275 - 3972402
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||| |||||||||||||||||||||||||||  ||| |||| |||||| | | ||||||||||| ||||||||||||||||||||||||  ||    
T  3972275 ttattctcatgaaattaaatgcaaattacattcaatttgttctctcttccattttcttcctaaccaatagctaatgaaaattgtttttacatcttcccat 3972374  T
Q  173 aaaacttttttcaaagaaaacacaaaaaa 201  Q
    ||||| || ||||||||||||||||||||    
T  3972375 aaaac-ttattcaaagaaaacacaaaaaa 3972402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 73 - 201
Target Start/End: Complemental strand, 3997603 - 3997476
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||| |||||||||||||||||||||||||||  ||| |||| |||||| | | ||||||||||| ||||||||||||||||||||||||  ||    
T  3997603 ttattctcatgaaattaaatgcaaattacattcaatttgttctctcttccattttcttcctaaccaatagctaatgaaaattgtttttacatcttcccat 3997504  T
Q  173 aaaacttttttcaaagaaaacacaaaaaa 201  Q
    ||||| || ||||||||||||||||||||    
T  3997503 aaaac-ttattcaaagaaaacacaaaaaa 3997476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 83 - 230
Target Start/End: Complemental strand, 8097132 - 8096985
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| | |||||||||| |||| ||||||||||| || |||| ||||| |||||||||||| ||||||||||||| |||||||||| ||    
T  8097132 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataagcaataaccaatgaaaattatttttacatcttcctataaaacttatt 8097033  T
Q  183 tcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||| || ||||||| |||||||  | |||| |  |||||||||||||    
T  8097032 tcaaggataacacaagaaactatgttgcaaactactatgttttagttt 8096985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 47115849 - 47116006
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||| |||||||||  ||||| |||| |||||||||||| || |||||| ||||||| ||||| |||| |||||||| |||||||||||   ||    
T  47115849 ttattctcatgaaattaaatataaatttcatttaattttctcttttttccattttatccataatcaataaccaaagaaaattgcttttacatctttccat 47115948  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||| || ||  |||  |||||||||||| ||||||| ||||||||||||||||||||    
T  47115949 aaaatttattctaaaacaaacacaaaaaattatactctaaattcttatgttttagttt 47116006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 73 - 161
Target Start/End: Complemental strand, 46557325 - 46557237
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgttttta 161  Q
    |||||||||| |||||||||| |||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||    
T  46557325 ttattctcatgaaattaaatgtaaattacatttaattttctctctctttcattttttccataactaatagccaatgaaaattattttta 46557237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 83 - 230
Target Start/End: Complemental strand, 22479168 - 22479021
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| | |||||||||| |||| | ||||||||| || |||| |||   |||||||||| ||||||||||||||| |||||||||| ||    
T  22479168 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaagtgtttttacatcttcctataaaacttatt 22479069  T
Q  183 tcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||| |||||||||||||||  | |||| |  |||||||||||||    
T  22479068 tcaaagataacacaaaaaactatgttacaaactactatgttttagttt 22479021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 83 - 230
Target Start/End: Complemental strand, 30454838 - 30454692
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| | |||||||||| |||| ||||||||||| || |||||||||| ||||| |||||||||||||||||||  |||||||||| ||    
T  30454838 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataaccaataaccaat-aaaattgtttttacatctttctataaaacttatt 30454740  T
Q  183 tcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||| || ||||||| |||||||  | |||| |  |||||||||||||    
T  30454739 tcaaggataacacaagaaactatgttgcaaactactatgttttagttt 30454692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 73 - 167
Target Start/End: Original strand, 6752670 - 6752764
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctt 167  Q
    ||||| |||| ||||||||||||||||||||||| ||| |||| |||| |||||| ||||||||||||||||||| |||||||||||||||||||    
T  6752670 ttattttcatgaaattaaatgcaaattacattcattttcctctctcttccattttctccataaccaatagccaattaaaattgtttttacatctt 6752764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 34194892 - 34194994
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| | |||||| ||| |||| ||||||||||| || |||||||||| |||||||||||||||||||||||||| |||||||||| ||    
T  34194892 aaaattaaatgcaaagtgcattcagtttgctctctctttcattttctcaataaccaataaccaatgaaaattgtttttacatcttcctataaaacttatt 34194991  T
Q  183 tca 185  Q
    |||    
T  34194992 tca 34194994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 90 - 203
Target Start/End: Complemental strand, 16033094 - 16032981
Alignment:
Q  90 aatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaaga 189  Q
    |||||||| | |||||||||| || | |||||||||||||| ||||| |||| |||||||||||||||||||||||||| |||||||||| |||||| ||    
T  16033094 aatgcaaagtgcattcaatttgctttctctttcattttttcaataactaataaccaatgaaaattgtttttacatcttcctataaaacttatttcaagga 16032995  T
Q  190 aaacacaaaaaact 203  Q
     ||||||| |||||    
T  16032994 taacacaagaaact 16032981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 206
Target Start/End: Original strand, 38401384 - 38401507
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| |||||| |||||||||| | ||||||||| || ||||  ||   |||||||||||| ||||||||||| | |||||||||| ||    
T  38401384 aaaattaaatgcaaagtacatttaattttctctctttttcattttctctataattaactaccaatgaaaattatttttacatctccctataaaacttatt 38401483  T
Q  183 tcaaagaaaacacaaaaaactata 206  Q
    ||||||| ||||||||||||||||    
T  38401484 tcaaagataacacaaaaaactata 38401507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 73 - 164
Target Start/End: Complemental strand, 47867036 - 47866946
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacat 164  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||| || ||| ||||||| ||||||||||||||||| ||||||||||    
T  47867036 ttattctcataaa-ttaaatgcaaattacattcaattttctctctcttccactttctccataatcaatagccaatgaaaatggtttttacat 47866946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 142
Target Start/End: Complemental strand, 33974683 - 33974614
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatag 142  Q
    |||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||    
T  33974683 ttattctcataaaattaaatgcaaattacattaaattttctttctctttcattttttccataaccaatag 33974614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 73 - 177
Target Start/End: Original strand, 38674870 - 38674974
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||| || ||||||||| ||||||| |||||||||||||| ||||||||||| | ||||| |||||| ||||||||||||||||||| | |||| ||    
T  38674870 ttattcttatgaaattaaatacaaattagattcaattttctctctctttcattttcttcataatcaatagtcaatgaaaattgtttttacttattctcat 38674969  T
Q  173 aaaac 177  Q
    |||||    
T  38674970 aaaac 38674974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 83 - 230
Target Start/End: Original strand, 10114915 - 10115062
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||| ||||| | |||||||||| |||| | ||||||||| || |||| |||   |||||||||||||||||||||||||| |||||||||| ||    
T  10114915 aaaattaaaagcaaagtgcattcaatttgctctatttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatt 10115014  T
Q  183 tcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||| || |||||||| |||  | |||| |  |||||||||||||    
T  10115015 tcaaagataatacaaaaaattatgttacaaactactatgttttagttt 10115062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 83 - 230
Target Start/End: Complemental strand, 22456122 - 22455975
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| | |||||||||| |||| | ||||||||| || |||| |||   ||||| ||||||||||||| |||||| |||||||||| ||    
T  22456122 aaaattaaatgcaaaatgcattcaatttgctctctttttcattttctctataatcaactaccaatcaaaattgtttttatatcttcctataaaacttatt 22456023  T
Q  183 tcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||  |||||||||||||||  | |||| |  |||||||||||||    
T  22456022 tcaaagttaacacaaaaaactatgttacaaactactatgttttagttt 22455975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 205
Target Start/End: Complemental strand, 7886731 - 7886609
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||| ||||||||| | |||||||||| |||| ||||||||||| || ||||| |||| |||||||||||||||||||||||||  ||||||| || ||    
T  7886731 aaaatcaaatgcaaagtgcattcaatttgctctctctttcattttctcaataactaataaccaatgaaaattgtttttacatctttctataaaatttatt 7886632  T
Q  183 tcaaagaaaacacaaaaaactat 205  Q
    ||||  | ||||||| |||||||    
T  7886631 tcaagaataacacaagaaactat 7886609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 205
Target Start/End: Original strand, 21214245 - 21214367
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| | |||||||||| |||| | ||| ||||| || |||| |||   |||||||||||||||||||||||||  |||||||||| ||    
T  21214245 aaaattaaatgcaaagtgcattcaatttgctctcttttttattttctcaataatcaactaccaatgaaaattgtttttacatctttctataaaacttatt 21214344  T
Q  183 tcaaagaaaacacaaaaaactat 205  Q
    ||||| | |||||||||||||||    
T  21214345 tcaaaaataacacaaaaaactat 21214367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 205
Target Start/End: Complemental strand, 46918327 - 46918205
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    |||||||| |||||| | ||||| |||| | || ||||||||||| || |||||||||| ||||||||||||||||||| |||||| |||||||||| ||    
T  46918327 aaaattaagtgcaaagtgcattccatttgcactctctttcattttctcaataaccaataaccaatgaaaattgtttttagatcttcctataaaacttatt 46918228  T
Q  183 tcaaagaaaacacaaaaaactat 205  Q
    | || || ||||||| |||||||    
T  46918227 ttaaggataacacaagaaactat 46918205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 83 - 198
Target Start/End: Original strand, 10252015 - 10252130
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||| ||||| | |||||||||| |||| | ||||||||| || |||| |||   |||||||||||||||||||||||||| |||||||||| ||    
T  10252015 aaaattaaaagcaaagtgcattcaatttgctctatttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatt 10252114  T
Q  183 tcaaagaaaacacaaa 198  Q
    ||||||| || |||||    
T  10252115 tcaaagataatacaaa 10252130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 83 - 230
Target Start/End: Complemental strand, 47444087 - 47443941
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| | |||||||||| || | | ||||||||| || |||| |||   ||| |||||||||||||||||||||| ||||||| || ||    
T  47444087 aaaattaaatgcaaagtgcattcaatttgctatctttttcattttctctataatcaactaccagtgaaaattgtttttacatcttc-tataaaatttatt 47443989  T
Q  183 tcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||| |||||||||||||||  | |||| |  |||||||||||||    
T  47443988 tcaaagataacacaaaaaactatgttacaaactaatatgttttagttt 47443941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 137 - 230
Target Start/End: Complemental strand, 33973627 - 33973533
Alignment:
Q  137 caatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaa-aaaactatactccaaattcttatgttttagttt 230  Q
    ||||||||| |||||||| |||| || ||||  |||||||||||||| ||||||||||||| |||||||||||||||||| |||| |||||||||    
T  33973627 caatagccactgaaaattattttgacgtctttctataaaactttttttaaagaaaacacaaaaaaactatactccaaatttttatattttagttt 33973533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 48802604 - 48802548
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttttt 129  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  48802604 ttattctcataaaagtaaatgcaaattacattcaattttctctctctttcatttttt 48802548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 198
Target Start/End: Original strand, 10014273 - 10014388
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||| ||||| | |||||||||| |||| | ||| ||||| || |||| |||   |||||||||||||||||||||||||| |||||||||| ||    
T  10014273 aaaattaaaagcaaagtgcattcaatttactctattttttattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatt 10014372  T
Q  183 tcaaagaaaacacaaa 198  Q
    ||||||| || |||||    
T  10014373 tcaaagataatacaaa 10014388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 112
Target Start/End: Complemental strand, 23910675 - 23910580
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaa-annnnnnnnngttattctcataaaattaaatgcaaattacattcaattttc 112  Q
    |||||||||||||||||||||||||||| ||||||||||| ||| |          ||||||||||| ||||||||||||||||||||||||||||    
T  23910675 gtcccaaaatataagcaaaaaagacaaatttttatctttttcaagattttttttgtttattctcatataattaaatgcaaattacattcaattttc 23910580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 121 - 230
Target Start/End: Complemental strand, 3084256 - 3084147
Alignment:
Q  121 tcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttat 220  Q
    ||||||| |||||||| |||| |||||||| |||||||||||||||||  ||||||||  ||| || ||  |||||| ||| |||||| |||||||| ||    
T  3084256 tcattttctccataacaaataaccaatgaatattgtttttacatcttcccataaaactaattttaaggaggacacaagaaattatacttcaaattctcat 3084157  T
Q  221 gttttagttt 230  Q
     |||||||||    
T  3084156 attttagttt 3084147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 82 - 207
Target Start/End: Original strand, 31126214 - 31126339
Alignment:
Q  82 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 181  Q
    |||||||||||||||||| ||||||||||  |||   ||| ||||| |||||||    || |||||||||||| ||||||||||||   ||||||||| |    
T  31126214 taaaattaaatgcaaattgcattcaatttgttctcctttttattttctccataatttttaaccaatgaaaattatttttacatctttccataaaacttat 31126313  T
Q  182 ttcaaagaaaacacaaaaaactatac 207  Q
    ||||| || ||||||||||| |||||    
T  31126314 ttcaaggagaacacaaaaaattatac 31126339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 123 - 230
Target Start/End: Complemental strand, 8769651 - 8769546
Alignment:
Q  123 attttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgt 222  Q
    ||||| ||||||| || |||||||| |||||| |||||||| ||||  || || ||||||  ||| ||||||| |||||||||||||| |||| ||||||    
T  8769651 attttctccataatcattagccaataaaaattatttttacaacttcccatgaatcttttt--aaaaaaaacaccaaaaactatactcctaattgttatgt 8769554  T
Q  223 tttagttt 230  Q
    ||||||||    
T  8769553 tttagttt 8769546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 136
Target Start/End: Original strand, 9264008 - 9264071
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataac 136  Q
    |||||||||||||||||||||||||||||||  |||||| ||| ||||||||||| ||| ||||    
T  9264008 ttattctcataaaattaaatgcaaattacatctaattttatctctctttcattttctccgtaac 9264071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 205
Target Start/End: Complemental strand, 2994532 - 2994407
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacat----cttcttataaaact 178  Q
    ||||||||||||||| | |||||||||| |||| | ||||||||| || |||| |||   ||||||||||||| ||||||||    |||| |||||||||    
T  2994532 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattg-ttttacatcttccttcctataaaact 2994434  T
Q  179 tttttcaaagaaaacacaaaaaactat 205  Q
    | ||||||  | |||||||||||||||    
T  2994433 tatttcaagcataacacaaaaaactat 2994407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 230
Target Start/End: Complemental strand, 8764744 - 8764646
Alignment:
Q  130 ccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagtt 229  Q
    |||||| || |||||||| |||||| |||||||| ||||  || ||  |||||| ||| |||||||||||| ||||||||| |||| |||||||||||||    
T  8764744 ccataatcattagccaataaaaattatttttacaacttcccatgaa--tttttttaaaaaaaacacaaaaagctatactcctaattgttatgttttagtt 8764647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 14752419 - 14752382
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatctt 55  Q
    ||||||||||||||||||||||||||||||||||||||    
T  14752419 gtcccaaaatataagcaaaaaagacaaacttttatctt 14752382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 48291826 - 48291931
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||| ||| | |||||||||| |||| | ||||||||||||  ||| |||   |||||||||||| |||||||| |||| |||||||||| ||    
T  48291826 aaaattaaatggaaagtgcattcaatttgctctctttttcattttttctgtaatcaactaccaatgaaaattatttttacaccttcctataaaacttatt 48291925  T
Q  183 tcaaag 188  Q
    | ||||    
T  48291926 ttaaag 48291931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 167
Target Start/End: Original strand, 51426621 - 51426706
Alignment:
Q  82 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctt 167  Q
    |||||||||||||||||||||||||||||  ||||  ||| ||||| |||||||    || |||||||||||| ||||||||||||    
T  51426621 taaaattaaatgcaaattacattcaatttgttcttctttttattttctccataatttttaaccaatgaaaattatttttacatctt 51426706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 6784390 - 6784450
Alignment:
Q  145 aatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactat 205  Q
    |||||||||| ||||||||||||| ||||||| || ||| ||||| |||||||||||||||    
T  6784390 aatgaaaattatttttacatcttcctataaaatttatttgaaagataacacaaaaaactat 6784450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 113
Target Start/End: Original strand, 34722564 - 34722599
Alignment:
Q  78 ctcataaaattaaatgcaaattacattcaattttct 113  Q
    ||||||||||||||||||||||||||||||||||||    
T  34722564 ctcataaaattaaatgcaaattacattcaattttct 34722599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 230
Target Start/End: Complemental strand, 25242227 - 25242145
Alignment:
Q  148 gaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||||||||| ||||||  |||||||||| ||| ||||| |||||||||||||||  | |||| |  |||||||||||||    
T  25242227 gaaaattgttttttcatctttctataaaacttattttaaagataacacaaaaaactatgttacaaactactatgttttagttt 25242145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 179
Target Start/End: Complemental strand, 54725670 - 54725628
Alignment:
Q  137 caatagccaatgaaaattgtttttacatcttcttataaaactt 179  Q
    ||||| |||||||||||||||||||||||||| ||||||||||    
T  54725670 caataaccaatgaaaattgtttttacatcttcctataaaactt 54725628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 230
Target Start/End: Original strand, 17587779 - 17587856
Alignment:
Q  153 ttgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||||||||||||||| |||||||||| ||||||  | |||| || |||||||| | ||||||  |||||||||||||    
T  17587779 ttgtttttacatcttcctataaaacttatttcaagaataacaaaagaaactatattgcaaattactatgttttagttt 17587856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 140
Target Start/End: Complemental strand, 41936313 - 41936248
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaat 140  Q
    |||||||||| ||| |||||||||||| ||||||||||||||  |||  |||||| ||||||||||||    
T  41936313 ttattctcatgaaactaaatgcaaattgcattcaattttctc--tctcccattttctccataaccaat 41936248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 82 - 201
Target Start/End: Original strand, 1335112 - 1335231
Alignment:
Q  82 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttt 181  Q
    |||||||||||||||||| ||||||||||  ||||  ||| ||||| |||||||    || ||||| |||||| ||||||||||||   || |||||| |    
T  1335112 taaaattaaatgcaaattgcattcaatttgttcttctttttattttctccataatttttaaccaataaaaattatttttacatctttccatgaaacttat 1335211  T
Q  182 ttcaaagaaaacacaaaaaa 201  Q
    | ||| || |||||||||||    
T  1335212 tccaaggagaacacaaaaaa 1335231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 6074995 - 6075030
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatc 53  Q
    ||||||||||||||||||||||||||||| ||||||    
T  6074995 gtcccaaaatataagcaaaaaagacaaacatttatc 6075030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 7866694 - 7866659
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatc 53  Q
    |||||||||||||| |||||||||||||||||||||    
T  7866694 gtcccaaaatataaacaaaaaagacaaacttttatc 7866659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 114
Target Start/End: Complemental strand, 8769683 - 8769644
Alignment:
Q  75 attctcataaaattaaatgcaaattacattcaattttctc 114  Q
    |||||||| |||||||||||||||||| ||||||||||||    
T  8769683 attctcattaaattaaatgcaaattacgttcaattttctc 8769644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 22479246 - 22479211
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatc 53  Q
    |||||||| |||||||||||||||||||||||||||    
T  22479246 gtcccaaattataagcaaaaaagacaaacttttatc 22479211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 123 - 206
Target Start/End: Original strand, 30612221 - 30612304
Alignment:
Q  123 attttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactata 206  Q
    ||||||||||||| || || ||||||| |||||||||||||||||  ||| |||||  ||| ||||| |||| |||||| ||||    
T  30612221 attttttccataatcattaaccaatgagaattgtttttacatctttctatgaaactcattttaaagagaacataaaaaattata 30612304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 37074871 - 37074906
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatc 53  Q
    ||||| ||||||||||||||||||||||||||||||    
T  37074871 gtcccgaaatataagcaaaaaagacaaacttttatc 37074906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 186
Target Start/End: Complemental strand, 23209393 - 23209291
Alignment:
Q  84 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttttt 183  Q
    |||||||||||||||| |||||| | |  |||  |||||||||| ||  |||| |||| ||||| |||||| ||||| ||||||  |||||||||| |||    
T  23209393 aaattaaatgcaaattgcattcattatgttctccctttcattttctctctaactaataaccaataaaaattattttttcatctttctataaaacttattt 23209294  T
Q  184 caa 186  Q
    |||    
T  23209293 caa 23209291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 230
Target Start/End: Original strand, 31292664 - 31292762
Alignment:
Q  132 ataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||| |||| ||||||||||||||||||||||||||  ||| ||||  || ||| || |||| || ||| |||||| ||||||   ||||||||||||    
T  31292664 ataacaaataaccaatgaaaattgtttttacatcttcccatagaactaattccaaggagaacaaaagaaattatacttcaaattaccatgttttagttt 31292762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 115
Target Start/End: Complemental strand, 36509582 - 36509540
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctct 115  Q
    |||||||||| |||||||||| ||||||||||| |||||||||    
T  36509582 ttattctcatcaaattaaatgtaaattacattcgattttctct 36509540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 167
Target Start/End: Complemental strand, 45868582 - 45868536
Alignment:
Q  121 tcattttttccataaccaatagccaatgaaaattgtttttacatctt 167  Q
    ||||||| ||| |||| |||| |||||||||||||||||||||||||    
T  45868582 tcattttctccgtaacaaataaccaatgaaaattgtttttacatctt 45868536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 52
Target Start/End: Original strand, 2927206 - 2927235
Alignment:
Q  23 aaaatataagcaaaaaagacaaacttttat 52  Q
    ||||||||||||||||||||||||||||||    
T  2927206 aaaatataagcaaaaaagacaaacttttat 2927235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 112
Target Start/End: Complemental strand, 8764783 - 8764746
Alignment:
Q  75 attctcataaaattaaatgcaaattacattcaattttc 112  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  8764783 attctcattaaattaaatgcaaattacgttcaattttc 8764746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 19463988 - 19464021
Alignment:
Q  19 tcccaaaatataagcaaaaaagacaaacttttat 52  Q
    |||||||||||||||| |||||||||||||||||    
T  19463988 tcccaaaatataagcagaaaagacaaacttttat 19464021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 28875319 - 28875356
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatctt 55  Q
    |||||||||||||||||||||| | |||||||||||||    
T  28875319 gtcccaaaatataagcaaaaaatataaacttttatctt 28875356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 2878213 - 2878253
Alignment:
Q  184 caaagaaaacacaaaaaactatactccaaattcttatgttt 224  Q
    |||||| |||||||||||||||| || ||||||||||||||    
T  2878213 caaagataacacaaaaaactatattctaaattcttatgttt 2878253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 50
Target Start/End: Complemental strand, 33974766 - 33974738
Alignment:
Q  22 caaaatataagcaaaaaagacaaactttt 50  Q
    |||||||||||||||||||||||||||||    
T  33974766 caaaatataagcaaaaaagacaaactttt 33974738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 207
Target Start/End: Original strand, 34022662 - 34022726
Alignment:
Q  143 ccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatac 207  Q
    ||||||| |||| ||||||||||||   ||||||||| |||||| || ||||||||||| |||||    
T  34022662 ccaatgagaattatttttacatctttccataaaacttatttcaaggagaacacaaaaaattatac 34022726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 47866921 - 47866893
Alignment:
Q  200 aactatactccaaattcttatgttttagt 228  Q
    |||||||||||||||||||||||||||||    
T  47866921 aactatactccaaattcttatgttttagt 47866893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0774 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 18 - 219
Target Start/End: Complemental strand, 3649 - 3447
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnngtt-attctcataaaattaaatgcaaattacattcaattttctctt 116  Q
    |||||||||||||||||||||||| |||||||||||||||| ||          ||| ||||||||| |||||||||||||||||||||||||||||||     
T  3649 gtcccaaaatataagcaaaaaagataaacttttatcttttctaagattgttgttgtttattctcatacaattaaatgcaaattacattcaattttctctc 3550  T
Q  117 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 216  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||    
T  3549 tctttcattttttccataaccaatagccaatgaaaattatttttacatcttcctataaaactttttcaaaagaaaacacaaaaaactatactccaaattc 3450  T
Q  217 tta 219  Q
    |||    
T  3449 tta 3447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 18 - 226
Target Start/End: Original strand, 9985 - 10194
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatcttttccaaannnnnnnnngtt-attctcataaaattaaatgcaaattacattcaattttctctt 116  Q
    ||||||||||||||| ||||||| ||||||||||||||||| ||          ||| ||||||||| |||||||||||||||||||||||||||||||     
T  9985 gtcccaaaatataagtaaaaaaggcaaacttttatcttttctaagattttttttgtttattctcatacaattaaatgcaaattacattcaattttctctc 10084  T
Q  117 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattc 216  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||| | |||||||||    
T  10085 tctttcattttttccataaccaatagtcaatgaaaattgtttttacatcttcctataaaactttttctaaagaaaacacaaaaaactacattccaaattc 10184  T
Q  217 ttatgtttta 226  Q
    ||||||||||    
T  10185 ttatgtttta 10194  T

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Target: scaffold0018 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 22 - 230
Target Start/End: Original strand, 154805 - 155013
Alignment:
Q  22 caaaatataagcaaaaaagacaaacttttatcttttccaa-annnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctt 120  Q
    ||||||||||| |||||||| ||||||||||||||| ||| |          |||||||||||||||||||||||||||||||| |||||||||| ||||    
T  154805 caaaatataagtaaaaaagataaacttttatctttttcaagattttttttttttattctcataaaattaaatgcaaattacattaaattttctctatctt 154904  T
Q  121 tcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttat 220  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||| || |||||||||| | || ||||||||    
T  154905 tcattttttccataaccaatagccaatgtaaattgtttttacatctttctataaaacttttttcaaagaaaatac-aaaaactatatttcagattcttat 155003  T
Q  221 gttttagttt 230  Q
    ||||||||||    
T  155004 gttttagttt 155013  T

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Target: scaffold0062 (Bit Score: 114; Significance: 8e-58; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 44936 - 44779
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||| ||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||||  || ||| |||    
T  44936 ttattctcgtaaaattaaatgcaaattacatttaattttccctctctttcattttttccataaccaatagccaatgaaaattgttttttaatattcctat 44837  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    |||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||    
T  44836 aaaactttttccaaagaaaacacaaaaaaatatactccaaattattatgttttagttt 44779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 106; Significance: 5e-53; HSPs: 4)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 1008 - 1165
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||||||||||| |||||||||||| |||||||||  |||||||||||||||||||||||||  ||||||||| ||||||||||||||  |||    
T  1008 ttattctcataaaattaaacgcaaattacattgaattttctccctctttcattttttccataaccaatactcaatgaaaactgtttttacatctttctat 1107  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||||||| ||| ||||||||||||||||||||||||||| |||| |||||||||    
T  1108 aaaacttttttaaaaaaaaacacaaaaaactatactccaaatttttatattttagttt 1165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 8968 - 9125
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||||||||||||||| |||||||||||| |||||||||  |||||||||||||||||||||||||  ||||||||| ||||||||||||||  |||    
T  8968 ttattctcataaaattaaacgcaaattacattgaattttctccctctttcattttttccataaccaatactcaatgaaaactgtttttacatctttctat 9067  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
    ||||||||||| ||| ||||||||||||||||||||||||||| |||| |||||||||    
T  9068 aaaacttttttaaaaaaaaacacaaaaaactatactccaaatttttatattttagttt 9125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 921 - 956
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatc 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  921 gtcccaaaatataagcaaaaaagacaaacttttatc 956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 8881 - 8916
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttatc 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  8881 gtcccaaaatataagcaaaaaagacaaacttttatc 8916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 102; Significance: 1e-50; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 157790 - 157947
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||| |  ||    
T  157790 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttattttttccataaccaattgccaatgaaaattgtttttacatctccccat 157889  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
     |||||| || |||||||||||||||||||||| || |||||||||||| ||||||||    
T  157890 gaaacttattccaaagaaaacacaaaaaactatgctacaaattcttatgctttagttt 157947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 73 - 164
Target Start/End: Complemental strand, 52767 - 52676
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacat 164  Q
    ||||| |||| ||||||||||| ||||||||| |||||||||| ||||  ||||| ||||||| |||||| |||||||||||||||||||||    
T  52767 ttattttcatgaaattaaatgcgaattacatttaattttctctctcttctattttctccataatcaatagtcaatgaaaattgtttttacat 52676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 157703 - 157737
Alignment:
Q  18 gtcccaaaatataagcaaaaaagacaaacttttat 52  Q
    |||||||||||||||||||||||||||||||||||    
T  157703 gtcccaaaatataagcaaaaaagacaaacttttat 157737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 73 - 220
Target Start/End: Original strand, 40175 - 40321
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||| |||||||||||||||||||||||| ||||||| || | ||||||||| |||||||||||||||||||||||||||||||| |||  |||    
T  40175 ttattctcatgaaattaaatgcaaattacattcaactttctctctcatccattttttctataaccaatagccaatgaaaattgtttttacaactttctat 40274  T
Q  173 aaaacttttttcaaagaaaacacaaaaaactatactccaaattcttat 220  Q
    |||| || || ||||||||||||||||| ||||||| |||||||||||    
T  40275 aaaatttattccaaagaaaacacaaaaagctatact-caaattcttat 40321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 73 - 203
Target Start/End: Original strand, 160246 - 160376
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    ||||||| || |||||||||  |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| || ||||||||||||  ||    
T  160246 ttattcttatgaaattaaatataaattacattcaattttctctttcttccatttttcccataaccaatagccaatgaaaactggttttacatcttcccat 160345  T
Q  173 aaaacttttttcaaagaaaacacaaaaaact 203  Q
     ||  || || ||||||||||||||||||||    
T  160346 gaattttattccaaagaaaacacaaaaaact 160376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 206
Target Start/End: Complemental strand, 6030 - 5907
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||||||||||| | |||||||||| |||| | |||||||||||| |||| |||    ||| ||||||||||||||||||||| |||||||||| ||    
T  6030 aaaattaaatgcaaagtgcattcaatttactctctttttcattttttctataatcaactatcaaggaaaattgtttttacatcttcctataaaacttatt 5931  T
Q  183 tcaaagaaaacacaaaaaactata 206  Q
    |||| || ||||||||||||||||    
T  5930 tcaatgataacacaaaaaactata 5907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 233652 - 233495
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttat 172  Q
    |||||||||| |||||||||||||||||||||||||| || || |||| |||||| |   ||| | |||||||||||||| |||||||||||||||  ||    
T  233652 ttattctcatgaaattaaatgcaaattacattcaattatcactctcttccattttctttttaatccatagccaatgaaaa-tgtttttacatcttcccat 233554  T
Q  173 aaaacttttttcaaag-aaaacacaaaaaactatactccaaattcttatgttttagttt 230  Q
     |||||| ||| |||| |||||||||| |||||||    |||||||||| |||||||||    
T  233553 gaaacttattttaaagaaaaacacaaataactatatattaaattcttatattttagttt 233495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 205
Target Start/End: Complemental strand, 161053 - 160952
Alignment:
Q  104 tcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaact 203  Q
    ||||||| |||||||||||||||| || ||||| |||| ||||||||||||||||||||| |||  ||| |||||| |||||| || ||||||| |||||    
T  161053 tcaatttgctctttctttcattttctcaataacaaataaccaatgaaaattgtttttacaactttctatcaaacttatttcaaggataacacaagaaact 160954  T
Q  204 at 205  Q
    ||    
T  160953 at 160952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 83 - 205
Target Start/End: Original strand, 3174 - 3296
Alignment:
Q  83 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttt 182  Q
    ||||||| ||||||| | ||||||||||  | | | ||||||||| || |||| |||   |||||| |||||||||||| |||||| |||||||||| ||    
T  3174 aaaattatatgcaaagtgcattcaatttgttttctttttcattttctctataatcaactaccaatggaaattgtttttagatcttcctataaaacttatt 3273  T
Q  183 tcaaagaaaacacaaaaaactat 205  Q
    ||||||| |||||||||||||||    
T  3274 tcaaagataacacaaaaaactat 3296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1786 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold1786
Description:

Target: scaffold1786; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 893 - 963
Alignment:
Q  123 attttttccataaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaac 193  Q
    ||||| |||||||||||||| ||||||||||| |||||| |||||  |||||||||| || ||||||||||    
T  893 attttctccataaccaatagtcaatgaaaattatttttatatctttctataaaacttattccaaagaaaac 963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1786; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 114
Target Start/End: Original strand, 860 - 900
Alignment:
Q  73 ttattctcataaaattaaatgcaaattacattcaattttctc 114  Q
    |||||||||| ||||||||||||||||||||| |||||||||    
T  860 ttattctcatgaaattaaatgcaaattacatt-aattttctc 900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1157 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1157
Description:

Target: scaffold1157; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 1772 - 1690
Alignment:
Q  133 taaccaatagccaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaacacaaaaaactatactccaaatt 215  Q
    |||| |||| |||||||||| |||||||||||||||  || |||||  || ||| |||||||||| ||| |||| ||||||||    
T  1772 taacaaataaccaatgaaaaatgtttttacatcttcccatgaaactaattccaaggaaaacacaataaattataatccaaatt 1690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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