View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19545_high_12 (Length: 386)
Name: NF19545_high_12
Description: NF19545
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19545_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 364; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 364; E-Value: 0
Query Start/End: Original strand, 1 - 368
Target Start/End: Original strand, 6349719 - 6350086
Alignment:
| Q |
1 |
ttttgtggtggcaagttttgttgcagaaaaattaacatattaataggtaaagtataaagaccatgaacatgagaaatcccttgttcaaaggggttctgtg |
100 |
Q |
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| T |
6349719 |
ttttgtggtggcaagttttgttgcagaaagattaacatattaataggtaaagtataaagaccatgaacatgagaaatcccttgttcaaaggggttctgtg |
6349818 |
T |
|
| Q |
101 |
tttacattcataccttactttggtttgttagaaaattttaatcttccttccatcaaatatatttgaattaaattcttgaaacgcgcacatttattagtga |
200 |
Q |
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| T |
6349819 |
tttacattcataccttactttggtttgttagaaaattttaatcttccttccatcaaatatatttgaattaaattcttgaaacgcgcacatttattagtga |
6349918 |
T |
|
| Q |
201 |
catagcaaaacatgctgtgaaatttacaatatttgctggcttgtctatcttcatgctttatgattttatgatcttcagacaattttaactatttatatgt |
300 |
Q |
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| T |
6349919 |
catagcaaaacatgctgtgaaatttacaatatttgctggcttgtctatcttcatgctttatgattttatgatcttcagacaattttaactatttatatgt |
6350018 |
T |
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| Q |
301 |
caaatatcttatcaaccttagttatgtcaaatatatagattttggtgttaatgtgatttaatttctct |
368 |
Q |
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| T |
6350019 |
caaatatcttatcaaccttagttatgtcaaatatatagattttggtgttaatgtgatttaatttctct |
6350086 |
T |
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