View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19545_high_20 (Length: 244)
Name: NF19545_high_20
Description: NF19545
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19545_high_20 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 18 - 244
Target Start/End: Original strand, 6349483 - 6349709
Alignment:
| Q |
18 |
atgacattgtcacattgacttatggttttccagtcctctaataatactcttaactttggtggcatatttgttgagtttctttgacttccccttttgggaa |
117 |
Q |
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| T |
6349483 |
atgacattgtcacattgacttatggctttccagtcctctaataatactcttaactttggtggcatatttgttgtgtttctttgacttccccttttgggaa |
6349582 |
T |
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| Q |
118 |
atgtcaattggtttgctaaccaatctttggtcatcaacccgtgttggtttgttatagttcattctataatgtctaacatattcatcacaatgaggccgca |
217 |
Q |
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| T |
6349583 |
atgtcaattggtttgctaaccaatctttggtcatcaacccgtgttggtttgttatagttcattctataatgtctaacatattcatcacaatgaggccgca |
6349682 |
T |
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| Q |
218 |
acaagtttcattttggagtcgacggaa |
244 |
Q |
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| T |
6349683 |
acaagtttcattttggagtcgacggaa |
6349709 |
T |
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