View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19545_low_23 (Length: 249)
Name: NF19545_low_23
Description: NF19545
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19545_low_23 |
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Alignment Details
Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 6 - 226
Target Start/End: Complemental strand, 33505363 - 33505143
Alignment:
| Q |
6 |
tatataatacttagcatcaaagagatcaagagaggaaataagaaattaactgcaaacaaacggttatggcgatgaagctcaagtatctatcctccattgc |
105 |
Q |
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| T |
33505363 |
tatatattacttagcatcaaagagatcaagagaggaaataagaaattaactgcaaacaaacggttatggcgatgaagctcaagtatctatcctccattgc |
33505264 |
T |
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| Q |
106 |
tgaggatgttgttgctagatgtgcacagtacgtaatattaatactctcctattcatttcatctcccatattacaatttcaaaaagtgtttgttatacaac |
205 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |
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| T |
33505263 |
tgaggatgttgttgctagatgtgcacagtacgtaatattaatactctcctattcatttcatctcccacattataatttcaaaaagtgtttgttatacaac |
33505164 |
T |
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| Q |
206 |
ttcatctccaattattattga |
226 |
Q |
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||||||||||||||||||||| |
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| T |
33505163 |
ttcatctccaattattattga |
33505143 |
T |
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