View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19545_low_34 (Length: 213)
Name: NF19545_low_34
Description: NF19545
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19545_low_34 |
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Alignment Details
Target: chr7 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 128
Target Start/End: Original strand, 45666117 - 45666240
Alignment:
| Q |
9 |
gataatactaataaaacttgaaagaagcccgcccggtgccacnnnnnnnctttgccttatatatcttt-----gtacctctttccttaatcacctcctaa |
103 |
Q |
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| T |
45666117 |
gataataataataaaacttgaaagaagcccgcccggtgccactttttttctttgccttatatatctttactttgtacctctt-ccttaatcacctcctaa |
45666215 |
T |
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| Q |
104 |
atttcctttgttcacgttaatatag |
128 |
Q |
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| T |
45666216 |
atttcctttgttcacattaatatag |
45666240 |
T |
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