View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19548_high_7 (Length: 354)

Name: NF19548_high_7
Description: NF19548
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19548_high_7
NF19548_high_7
[»] chr5 (35 HSPs)
chr5 (13-337)||(4913019-4913343)
chr5 (40-98)||(20476540-20476598)
chr5 (39-93)||(32623218-32623272)
chr5 (40-93)||(4266096-4266149)
chr5 (40-95)||(43539219-43539274)
chr5 (40-89)||(4265986-4266035)
chr5 (40-93)||(13754295-13754348)
chr5 (40-89)||(24397364-24397413)
chr5 (40-94)||(1138672-1138726)
chr5 (39-93)||(10132368-10132422)
chr5 (40-98)||(12744935-12744993)
chr5 (40-98)||(12808020-12808078)
chr5 (39-89)||(16472958-16473008)
chr5 (40-89)||(8364748-8364797)
chr5 (40-89)||(13754409-13754458)
chr5 (40-89)||(15855847-15855896)
chr5 (40-89)||(15855961-15856010)
chr5 (40-89)||(16473073-16473122)
chr5 (40-89)||(21259848-21259897)
chr5 (40-93)||(33629349-33629402)
chr5 (40-89)||(35420616-35420665)
chr5 (40-89)||(35420730-35420779)
chr5 (54-98)||(28056201-28056245)
chr5 (40-87)||(43539112-43539158)
chr5 (40-98)||(21259734-21259792)
chr5 (40-98)||(21591217-21591275)
chr5 (40-98)||(21595334-21595392)
chr5 (39-84)||(780915-780960)
chr5 (40-89)||(1138563-1138612)
chr5 (40-89)||(2255580-2255629)
chr5 (40-89)||(33629465-33629514)
chr5 (49-93)||(2529095-2529139)
chr5 (56-88)||(10499947-10499979)
chr5 (50-98)||(21262052-21262100)
chr5 (40-84)||(29141809-29141853)
[»] chr8 (25 HSPs)
chr8 (39-98)||(35467279-35467338)
chr8 (40-98)||(38629583-38629641)
chr8 (39-98)||(14834675-14834734)
chr8 (39-98)||(24741826-24741885)
chr8 (40-98)||(15882310-15882368)
chr8 (40-98)||(40891122-40891180)
chr8 (40-98)||(17426632-17426690)
chr8 (47-93)||(4261987-4262033)
chr8 (40-90)||(8210327-8210377)
chr8 (40-98)||(8210432-8210490)
chr8 (52-93)||(11828612-11828653)
chr8 (40-89)||(15882204-15882253)
chr8 (40-93)||(24211282-24211335)
chr8 (40-89)||(33100649-33100698)
chr8 (40-89)||(37114242-37114291)
chr8 (40-84)||(24211401-24211445)
chr8 (40-91)||(29780963-29781014)
chr8 (39-94)||(38405252-38405306)
chr8 (40-98)||(37114347-37114405)
chr8 (40-98)||(38520127-38520185)
chr8 (40-93)||(12234581-12234634)
chr8 (40-89)||(17426748-17426797)
chr8 (40-89)||(23940923-23940972)
chr8 (40-89)||(29781077-29781126)
chr8 (39-91)||(33940724-33940775)
[»] chr7 (40 HSPs)
chr7 (40-98)||(35339282-35339340)
chr7 (40-98)||(24836129-24836187)
chr7 (40-98)||(3953046-3953104)
chr7 (40-98)||(10936474-10936532)
chr7 (40-98)||(20184242-20184300)
chr7 (40-94)||(25742439-25742493)
chr7 (40-98)||(30259070-30259128)
chr7 (40-98)||(31231618-31231676)
chr7 (40-98)||(34052388-34052446)
chr7 (40-89)||(10936588-10936637)
chr7 (40-89)||(31231734-31231783)
chr7 (40-89)||(38528530-38528579)
chr7 (40-88)||(33721831-33721879)
chr7 (40-87)||(39143826-39143873)
chr7 (44-98)||(30594802-30594856)
chr7 (40-98)||(39617845-39617903)
chr7 (49-98)||(12142302-12142351)
chr7 (40-89)||(29277842-29277891)
chr7 (40-89)||(34052283-34052332)
chr7 (40-89)||(35339396-35339445)
chr7 (40-89)||(35665637-35665686)
chr7 (40-89)||(35665734-35665783)
chr7 (40-89)||(38883225-38883274)
chr7 (40-89)||(38883339-38883388)
chr7 (40-89)||(48103372-48103421)
chr7 (50-98)||(37093877-37093925)
chr7 (39-98)||(29277946-29278005)
chr7 (40-89)||(24836024-24836073)
chr7 (64-98)||(33749753-33749787)
chr7 (40-89)||(3953160-3953209)
chr7 (40-89)||(9285832-9285881)
chr7 (40-89)||(9289899-9289948)
chr7 (40-89)||(20184357-20184406)
chr7 (40-89)||(30259184-30259233)
chr7 (40-89)||(30594697-30594746)
chr7 (40-89)||(33749648-33749696)
chr7 (40-89)||(37093772-37093821)
chr7 (40-89)||(47237546-47237595)
chr7 (49-97)||(38989084-38989132)
chr7 (40-92)||(48103480-48103532)
[»] chr2 (39 HSPs)
chr2 (40-109)||(10552980-10553048)
chr2 (40-98)||(2818775-2818833)
chr2 (40-89)||(1924099-1924148)
chr2 (40-93)||(43858548-43858601)
chr2 (40-98)||(1923984-1924042)
chr2 (40-90)||(24101836-24101886)
chr2 (40-98)||(43476055-43476113)
chr2 (40-93)||(9281351-9281404)
chr2 (40-89)||(9281465-9281514)
chr2 (40-89)||(16705737-16705786)
chr2 (40-89)||(22269840-22269889)
chr2 (40-89)||(23835880-23835929)
chr2 (40-89)||(24101950-24101999)
chr2 (40-89)||(34490460-34490509)
chr2 (40-89)||(34490574-34490623)
chr2 (53-98)||(42713794-42713839)
chr2 (40-89)||(45408629-45408678)
chr2 (40-91)||(7737181-7737232)
chr2 (40-91)||(45408741-45408792)
chr2 (40-94)||(3116989-3117043)
chr2 (40-93)||(16705847-16705900)
chr2 (40-89)||(20892888-20892937)
chr2 (40-89)||(22269726-22269775)
chr2 (40-89)||(34455889-34455938)
chr2 (50-91)||(39242997-39243038)
chr2 (41-89)||(2818671-2818719)
chr2 (40-91)||(12850546-12850597)
chr2 (50-93)||(17500020-17500063)
chr2 (40-98)||(27920681-27920739)
chr2 (40-89)||(3116880-3116929)
chr2 (40-89)||(7116374-7116423)
chr2 (40-89)||(9933687-9933736)
chr2 (49-90)||(17434798-17434839)
chr2 (40-89)||(29229482-29229530)
chr2 (40-89)||(29342782-29342830)
chr2 (40-97)||(34455995-34456052)
chr2 (40-89)||(37340970-37341019)
chr2 (43-91)||(7116486-7116534)
chr2 (66-98)||(40362591-40362623)
[»] chr3 (66 HSPs)
chr3 (40-91)||(32237398-32237449)
chr3 (40-98)||(10254678-10254736)
chr3 (40-98)||(21969161-21969219)
chr3 (40-98)||(21991597-21991655)
chr3 (40-98)||(45487908-45487966)
chr3 (40-89)||(4072392-4072441)
chr3 (40-89)||(12789610-12789659)
chr3 (40-93)||(26906568-26906621)
chr3 (40-93)||(36278760-36278813)
chr3 (40-93)||(50099548-50099601)
chr3 (40-98)||(3970495-3970553)
chr3 (40-98)||(4072277-4072335)
chr3 (40-98)||(12838186-12838244)
chr3 (40-98)||(13078167-13078225)
chr3 (40-98)||(25446359-25446416)
chr3 (40-89)||(3970609-3970658)
chr3 (40-93)||(10117625-10117678)
chr3 (40-89)||(21969275-21969324)
chr3 (40-89)||(21991711-21991760)
chr3 (40-89)||(26906458-26906507)
chr3 (40-89)||(36278874-36278923)
chr3 (40-89)||(38125297-38125346)
chr3 (40-89)||(39850348-39850397)
chr3 (40-89)||(45487803-45487852)
chr3 (40-89)||(55340412-55340461)
chr3 (39-89)||(8831743-8831793)
chr3 (40-98)||(8831850-8831908)
chr3 (44-98)||(25488349-25488403)
chr3 (44-98)||(25561120-25561174)
chr3 (40-98)||(35368842-35368900)
chr3 (39-93)||(42105386-42105440)
chr3 (40-98)||(44611386-44611443)
chr3 (40-89)||(1476669-1476718)
chr3 (40-89)||(5529895-5529944)
chr3 (40-89)||(10017118-10017167)
chr3 (40-89)||(10254572-10254621)
chr3 (40-89)||(12838081-12838130)
chr3 (40-89)||(13078281-13078330)
chr3 (40-93)||(22101279-22101332)
chr3 (40-93)||(22176223-22176276)
chr3 (40-89)||(25488459-25488508)
chr3 (40-89)||(25561015-25561064)
chr3 (40-89)||(26976960-26977009)
chr3 (40-89)||(32237512-32237561)
chr3 (40-89)||(32362865-32362914)
chr3 (40-89)||(35368553-35368602)
chr3 (40-89)||(36657437-36657486)
chr3 (40-89)||(36657551-36657600)
chr3 (40-89)||(36822764-36822813)
chr3 (40-89)||(37506244-37506293)
chr3 (40-89)||(39850463-39850512)
chr3 (40-89)||(43639200-43639249)
chr3 (40-89)||(45713021-45713070)
chr3 (40-89)||(46664180-46664229)
chr3 (39-91)||(297540-297592)
chr3 (50-98)||(46222042-46222090)
chr3 (39-98)||(1476554-1476613)
chr3 (40-91)||(26977806-26977857)
chr3 (43-89)||(44611499-44611545)
chr3 (40-89)||(404048-404097)
chr3 (40-89)||(10117519-10117568)
chr3 (40-89)||(10441262-10441311)
chr3 (40-89)||(10441376-10441425)
chr3 (40-89)||(36822878-36822927)
chr3 (40-89)||(42105501-42105550)
chr3 (40-84)||(10017232-10017276)
[»] chr6 (28 HSPs)
chr6 (40-98)||(21379945-21380003)
chr6 (40-91)||(4890484-4890535)
chr6 (40-98)||(885494-885552)
chr6 (39-93)||(29609115-29609169)
chr6 (40-89)||(7808727-7808776)
chr6 (40-93)||(8091176-8091229)
chr6 (40-89)||(20501710-20501759)
chr6 (40-89)||(21380059-21380108)
chr6 (40-91)||(15546748-15546799)
chr6 (40-94)||(6433694-6433748)
chr6 (40-94)||(13172578-13172632)
chr6 (40-98)||(13439805-13439863)
chr6 (40-98)||(14393673-14393731)
chr6 (40-98)||(18998121-18998178)
chr6 (40-89)||(885389-885438)
chr6 (40-89)||(3368989-3369038)
chr6 (40-89)||(4890599-4890648)
chr6 (40-89)||(7808613-7808662)
chr6 (40-89)||(11687147-11687196)
chr6 (40-89)||(11687261-11687310)
chr6 (40-89)||(13439699-13439748)
chr6 (40-89)||(15546636-15546685)
chr6 (40-89)||(17279528-17279577)
chr6 (50-89)||(8091076-8091115)
chr6 (39-89)||(20501824-20501873)
chr6 (39-89)||(31764443-31764493)
chr6 (49-89)||(14393574-14393614)
chr6 (40-98)||(17279636-17279691)
[»] chr4 (36 HSPs)
chr4 (40-98)||(24915798-24915856)
chr4 (40-98)||(43486204-43486262)
chr4 (40-89)||(42274611-42274660)
chr4 (39-98)||(9355556-9355615)
chr4 (40-91)||(27434726-27434777)
chr4 (40-98)||(1299021-1299079)
chr4 (40-98)||(13204486-13204544)
chr4 (40-98)||(20435144-20435202)
chr4 (40-98)||(24969545-24969603)
chr4 (40-98)||(32318724-32318782)
chr4 (40-98)||(42274496-42274554)
chr4 (40-93)||(530673-530726)
chr4 (40-89)||(530787-530836)
chr4 (40-93)||(4688251-4688304)
chr4 (40-89)||(18417661-18417710)
chr4 (40-89)||(52824243-52824292)
chr4 (40-93)||(55049404-55049457)
chr4 (40-98)||(18417766-18417824)
chr4 (40-98)||(21048709-21048767)
chr4 (40-98)||(23928572-23928629)
chr4 (40-89)||(1298916-1298965)
chr4 (40-89)||(3422547-3422596)
chr4 (40-89)||(20435258-20435307)
chr4 (41-93)||(24294581-24294636)
chr4 (40-89)||(24969662-24969711)
chr4 (40-89)||(35360681-35360729)
chr4 (39-98)||(16995558-16995616)
chr4 (40-91)||(55107640-55107691)
chr4 (40-98)||(4552894-4552952)
chr4 (40-98)||(35360785-35360842)
chr4 (40-89)||(4688366-4688415)
chr4 (40-89)||(13204381-13204430)
chr4 (40-89)||(23928685-23928734)
chr4 (40-93)||(36030943-36030996)
chr4 (40-89)||(37525061-37525110)
chr4 (40-89)||(55107528-55107577)
[»] chr1 (54 HSPs)
chr1 (40-98)||(27240928-27240986)
chr1 (40-93)||(2854536-2854589)
chr1 (40-89)||(4299513-4299562)
chr1 (40-89)||(14387133-14387182)
chr1 (40-93)||(23698506-23698559)
chr1 (40-89)||(27928416-27928465)
chr1 (40-89)||(47940689-47940738)
chr1 (40-93)||(48954218-48954271)
chr1 (40-88)||(25297966-25298014)
chr1 (44-98)||(42561303-42561357)
chr1 (40-98)||(47940574-47940632)
chr1 (40-98)||(51789601-51789659)
chr1 (40-89)||(2854650-2854699)
chr1 (40-89)||(5189473-5189522)
chr1 (40-89)||(9978170-9978219)
chr1 (40-89)||(19797099-19797148)
chr1 (40-89)||(19955029-19955078)
chr1 (40-93)||(21930492-21930545)
chr1 (40-89)||(23698620-23698669)
chr1 (40-89)||(27926370-27926419)
chr1 (40-93)||(29598451-29598504)
chr1 (40-89)||(48954332-48954381)
chr1 (40-89)||(49285093-49285142)
chr1 (40-93)||(50162542-50162595)
chr1 (39-98)||(49284297-49284356)
chr1 (40-98)||(957698-957756)
chr1 (40-98)||(5189578-5189636)
chr1 (40-98)||(14387019-14387077)
chr1 (40-98)||(19954915-19954973)
chr1 (40-98)||(40647227-40647285)
chr1 (40-89)||(1387896-1387945)
chr1 (40-89)||(3607847-3607896)
chr1 (40-89)||(15324630-15324679)
chr1 (40-93)||(15324741-15324794)
chr1 (41-89)||(16755229-16755278)
chr1 (40-93)||(26208539-26208592)
chr1 (40-93)||(27926255-27926308)
chr1 (40-89)||(36880629-36880678)
chr1 (40-89)||(42561413-42561462)
chr1 (40-89)||(50162657-50162706)
chr1 (40-89)||(50627135-50627184)
chr1 (50-89)||(21930394-21930433)
chr1 (51-98)||(27670252-27670299)
chr1 (40-98)||(3607733-3607791)
chr1 (39-93)||(27928301-27928355)
chr1 (49-87)||(46691164-46691202)
chr1 (40-93)||(9978055-9978108)
chr1 (40-89)||(19796985-19797034)
chr1 (40-89)||(27241042-27241091)
chr1 (40-89)||(50627249-50627298)
chr1 (40-89)||(51276813-51276862)
chr1 (40-89)||(51789713-51789762)
chr1 (50-98)||(2125084-2125132)
chr1 (50-98)||(28431716-28431764)
[»] scaffold0107 (2 HSPs)
scaffold0107 (40-93)||(51177-51230)
scaffold0107 (40-89)||(51067-51116)
[»] scaffold0188 (2 HSPs)
scaffold0188 (40-98)||(7195-7253)
scaffold0188 (40-89)||(7090-7139)
[»] scaffold0122 (2 HSPs)
scaffold0122 (40-98)||(45943-46001)
scaffold0122 (40-89)||(45838-45887)
[»] scaffold0595 (2 HSPs)
scaffold0595 (40-98)||(5814-5874)
scaffold0595 (40-89)||(5705-5754)
[»] scaffold0137 (1 HSPs)
scaffold0137 (40-89)||(10120-10169)
[»] scaffold0118 (1 HSPs)
scaffold0118 (40-93)||(14556-14609)
[»] scaffold0069 (1 HSPs)
scaffold0069 (40-89)||(26409-26458)
[»] scaffold0018 (1 HSPs)
scaffold0018 (49-98)||(138290-138339)
[»] scaffold0086 (1 HSPs)
scaffold0086 (40-98)||(48235-48293)
[»] scaffold0653 (1 HSPs)
scaffold0653 (40-89)||(3511-3560)
[»] scaffold0163 (1 HSPs)
scaffold0163 (40-89)||(2058-2107)


Alignment Details
Target: chr5 (Bit Score: 244; Significance: 1e-135; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 13 - 337
Target Start/End: Complemental strand, 4913343 - 4913019
Alignment:
Q  13 aatatttatagttataacaaataagtaaaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatgtattttcgtatgan 112  Q
    ||||||||||||||||| ||||||| |||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||      
T  4913343 aatatttatagttataataaataagaaaaaacttacgtacaatttcttaggtgttttttgtatggttcttaactaaattcatcatgtattttcgtatggt 4913244  T
Q  113 nnnnnnatttgttgattcggatttgccatagcatttgattcagattatgannnnnnnnctttcgaaaaaatatatattaaagaaagatgagatgacataa 212  Q
          |||||||||||||||||||||||||||||||||||| |||||||        |||||||||||| |||||||||||||||||||||||||||||    
T  4913243 ttttttatttgttgattcggatttgccatagcatttgattcaaattatgattttttttctttcgaaaaaaaatatattaaagaaagatgagatgacataa 4913144  T
Q  213 gacatgtttgatacaattcaaaaactataacaaatacatcccaaatcaaggacaagacagagatagaacaagagtccaaaaaccacaaaagtagccgatc 312  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4913143 gacatgtttgatacaattcaaaaactataacaaatacatctcaaatcaaggacaagacagagatagaacaagagtccaaaaaccacaaaagtagccgatc 4913044  T
Q  313 gatgaacctcaaacctcctaccaat 337  Q
    |||||||||||||||||||||||||    
T  4913043 gatgaacctcaaacctcctaccaat 4913019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 20476598 - 20476540
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  20476598 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcatcatg 20476540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 32623218 - 32623272
Alignment:
Q  39 aaaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattca 93  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  32623218 aaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaattca 32623272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 4266149 - 4266096
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattca 93  Q
    |||||||  |||||||||||||||| ||||||||||||||||||||||||||||    
T  4266149 aaaacttcggtacaattccttaggtgtttttcgtatggttcttaactaaattca 4266096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 95
Target Start/End: Complemental strand, 43539274 - 43539219
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatc 95  Q
    |||| ||| |||||||||||||||| ||||||||||||| ||||||||||||||||    
T  43539274 aaaatttaggtacaattccttaggtgtttttcgtatggtccttaactaaattcatc 43539219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 4265986 - 4266035
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||| ||||||| ||||||||||||||||||||||||    
T  4265986 aaaacttaggtacaatttcttaggtgtttttcgtatggttcttaactaaa 4266035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 13754295 - 13754348
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattca 93  Q
    |||||||| ||||||||||||| || ||||||||||| ||||||||||||||||    
T  13754295 aaaacttaggtacaattccttatgtgtttttcgtatgattcttaactaaattca 13754348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 24397413 - 24397364
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  24397413 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 24397364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 94
Target Start/End: Complemental strand, 1138726 - 1138672
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcat 94  Q
    |||||||| |||||||||| ||| |  ||||||||||||||||||||||||||||    
T  1138726 aaaacttaggtacaattccatagctgcttttcgtatggttcttaactaaattcat 1138672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 10132422 - 10132368
Alignment:
Q  39 aaaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattca 93  Q
    |||||||||  |||||||||||| || ||||| ||||||||||||||||||||||    
T  10132422 aaaaacttagatacaattccttatgtgttttttgtatggttcttaactaaattca 10132368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 12744993 - 12744935
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| |||||||||||||||| ||||||||||| || || |||||||||| ||||    
T  12744993 aaaacttaggtacaattccttaggtgtttttcgtatgatttttgactaaattcaccatg 12744935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 12808078 - 12808020
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||||||||||||| || ||||||||||| ||||| |||||||||| ||||    
T  12808078 aaaacttaggtacaattccttaagtgtttttcgtatgattcttgactaaattcaccatg 12808020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 16472958 - 16473008
Alignment:
Q  39 aaaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    ||||||||| |||||||||||||| |  |||||||||||||||||||||||    
T  16472958 aaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 16473008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 8364797 - 8364748
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||| ||||||||||||||||||    
T  8364797 aaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 8364748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 13754458 - 13754409
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||| ||| |||||||| ||||||| ||||||||||||||||||||||||    
T  13754458 aaaatttatgtacaattacttaggtgtttttcgtatggttcttaactaaa 13754409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 15855847 - 15855896
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||||||||| |  |||||||||||||||||||||||    
T  15855847 aaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 15855896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 15856010 - 15855961
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||||||||| |  |||||||||||||||||||||||    
T  15856010 aaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 15855961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 16473122 - 16473073
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||||||||| |  |||||||||||||||||||||||    
T  16473122 aaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 16473073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 21259897 - 21259848
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||| ||| ||||||||||||||||| ||||| |||||||||||||||||    
T  21259897 aaaatttaggtacaattccttaggtacttttcttatggttcttaactaaa 21259848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 33629349 - 33629402
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattca 93  Q
    |||||||| ||||||||||||| ||  |||| ||||||||||||||||||||||    
T  33629349 aaaacttaggtacaattccttatgtgcttttggtatggttcttaactaaattca 33629402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 35420616 - 35420665
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||||||||| |  |||||||||||||||||||||||    
T  35420616 aaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 35420665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 35420779 - 35420730
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||||||||| |  |||||||||||||||||||||||    
T  35420779 aaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 35420730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 28056245 - 28056201
Alignment:
Q  54 attccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    ||||||| ||||||||| |||||||||||||||||||| ||||||    
T  28056245 attcctttggtattttttgtatggttcttaactaaatttatcatg 28056201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 43539112 - 43539158
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaacta 87  Q
    |||||||| |||||||| |||||||||||||||||||||||| |||||    
T  43539112 aaaactta-gtacaatttcttaggtatttttcgtatggttctgaacta 43539158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 21259734 - 21259792
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||||||||||||| ||| ||  |||||||||||||||||  |||||||| ||||    
T  21259734 aaaacttacgtacaattctttatgtgcttttcgtatggttcttagttaaattcaccatg 21259792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 21591217 - 21591275
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||||||||||||| ||  ||||||||||||| | ||||||||||| ||||    
T  21591217 aaaacttaggtacaattccttaagtgcttttcgtatggttgtgaactaaattcaccatg 21591275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 21595334 - 21595392
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||||||||||||| ||  ||||||||||||| | ||||||||||| ||||    
T  21595334 aaaacttaggtacaattccttaagtgcttttcgtatggttgtgaactaaattcaccatg 21595392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 84
Target Start/End: Complemental strand, 780960 - 780915
Alignment:
Q  39 aaaaacttacgtacaattccttaggtatttttcgtatggttcttaa 84  Q
    ||||||||| |||||||| |||||||  ||||||||||||||||||    
T  780960 aaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaa 780915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 1138563 - 1138612
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||| || |||  |||||||||||||||||||||||    
T  1138563 aaaacttaggtacaattcttttggtgcttttcgtatggttcttaactaaa 1138612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 2255629 - 2255580
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||| ||||||  ||||||| |||||||||||||||    
T  2255629 aaaacttaggtacaattctttaggtgcttttcgtgtggttcttaactaaa 2255580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 33629514 - 33629465
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||| ||| |||||||||||||| | ||||||||||| ||||||||||||    
T  33629514 aaaatttaggtacaattccttagatgtttttcgtatgattcttaactaaa 33629465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 93
Target Start/End: Complemental strand, 2529139 - 2529095
Alignment:
Q  49 gtacaattccttaggtatttttcgtatggttcttaactaaattca 93  Q
    |||||||| |||||||  ||||||| |||||||||||||||||||    
T  2529139 gtacaatttcttaggtgcttttcgtgtggttcttaactaaattca 2529095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 10499979 - 10499947
Alignment:
Q  56 tccttaggtatttttcgtatggttcttaactaa 88  Q
    ||||||||| |||||||||||||||||||||||    
T  10499979 tccttaggtgtttttcgtatggttcttaactaa 10499947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 21262100 - 21262052
Alignment:
Q  50 tacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||||||||    |||| |||||||||||||||||||||||||||    
T  21262100 tacaattccttagcagctttttgtatggttcttaactaaattcatcatg 21262052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 29141809 - 29141853
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaa 84  Q
    ||||||||  ||||||| ||||||| |||||||||||||||||||    
T  29141809 aaaacttagatacaattgcttaggtgtttttcgtatggttcttaa 29141853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 98
Target Start/End: Complemental strand, 35467338 - 35467279
Alignment:
Q  39 aaaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    ||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||    
T  35467338 aaaaacttacgtacaattccttatgtgcttttcgtatggttcttaactaaattcatcatg 35467279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 38629641 - 38629583
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  38629641 aaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaattcaccatg 38629583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 39 - 98
Target Start/End: Original strand, 14834675 - 14834734
Alignment:
Q  39 aaaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    ||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| ||||    
T  14834675 aaaaacttacgtacaattccttacgtgcttttcgtatggttcttaactaaattcaccatg 14834734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 39 - 98
Target Start/End: Original strand, 24741826 - 24741885
Alignment:
Q  39 aaaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    ||||||||| ||||||||||||||||  ||||||||||||||||||||||||||| ||||    
T  24741826 aaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatg 24741885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 15882368 - 15882310
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||||||||||||||||  ||||||||||||||||||||||||||| ||||    
T  15882368 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatg 15882310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 40891180 - 40891122
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||||||||||||||||  ||||||||||||||||||||||||||| ||||    
T  40891180 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatg 40891122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 17426632 - 17426690
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||||||||| ||||||  ||||||||||||||||||||||||||| ||||    
T  17426632 aaaacttaggtacaattcattaggtgcttttcgtatggttcttaactaaattcaccatg 17426690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 93
Target Start/End: Original strand, 4261987 - 4262033
Alignment:
Q  47 acgtacaattccttaggtatttttcgtatggttcttaactaaattca 93  Q
    ||||||||||| ||||||  |||||||||||||||||||||||||||    
T  4261987 acgtacaattctttaggtgcttttcgtatggttcttaactaaattca 4262033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 8210327 - 8210377
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaat 90  Q
    |||||||| ||||||||||||||||  |||||||||| |||||||||||||    
T  8210327 aaaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaat 8210377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 8210490 - 8210432
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| |||||||||||||| | ||||| ||||| |||||||| ||||||||||||    
T  8210490 aaaacttaagtacaattccttagatgttttttgtatgattcttaaccaaattcatcatg 8210432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 52 - 93
Target Start/End: Original strand, 11828612 - 11828653
Alignment:
Q  52 caattccttaggtatttttcgtatggttcttaactaaattca 93  Q
    ||||| ||||||| ||||||||||||||||||||||||||||    
T  11828612 caatttcttaggtgtttttcgtatggttcttaactaaattca 11828653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 15882204 - 15882253
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||| ||||||||||||||||||    
T  15882204 aaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 15882253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 24211282 - 24211335
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattca 93  Q
    |||||||| ||||||||| ||||||  |||||||||||||||||| ||||||||    
T  24211282 aaaacttaggtacaattctttaggtgcttttcgtatggttcttaattaaattca 24211335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 33100649 - 33100698
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||| |||||||  |||||||||||||||||||||||    
T  33100649 aaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaa 33100698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 37114242 - 37114291
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||||||||||||||||| ||||    
T  37114242 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaattaaa 37114291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 24211445 - 24211401
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaa 84  Q
    |||||||| ||||||||||||||||  ||||||||||||||||||    
T  24211445 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaa 24211401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 29780963 - 29781014
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaatt 91  Q
    |||| ||| ||||||||||||||||  ||||||||||||| |||||||||||    
T  29780963 aaaatttaggtacaattccttaggtgcttttcgtatggtttttaactaaatt 29781014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 38405306 - 38405252
Alignment:
Q  39 aaaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcat 94  Q
    ||||||||| |||||||| |||| || ||||| |||||||||||||||||||||||    
T  38405306 aaaaactta-gtacaatttcttatgtgttttttgtatggttcttaactaaattcat 38405252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 37114405 - 37114347
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||| ||| ||||||||| |||| | ||||| |||||||||||||||||||||| ||||    
T  37114405 aaaatttaggtacaattctttagatgttttttgtatggttcttaactaaattcaccatg 37114347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 38520185 - 38520127
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||||||||||||| ||  |||||||||| || ||||||||||||| ||||    
T  38520185 aaaacttaggtacaattccttaagtgcttttcgtatgttttttaactaaattcaccatg 38520127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 12234634 - 12234581
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattca 93  Q
    |||||||| |||||||| ||||| |  ||||||||||||| |||||||||||||    
T  12234634 aaaacttaggtacaatttcttagatgcttttcgtatggttattaactaaattca 12234581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 17426797 - 17426748
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||  ||||||  |||||||||||||||||||||||    
T  17426797 aaaacttaggtacaattttttaggtgcttttcgtatggttcttaactaaa 17426748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 23940972 - 23940923
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    ||||||||  |||||||||||||||  ||||||||||||| |||||||||    
T  23940972 aaaacttagttacaattccttaggtgcttttcgtatggtttttaactaaa 23940923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 29781126 - 29781077
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| || ||||||||||| |  |||||||||||||||||||||||    
T  29781126 aaaacttaggtccaattccttagatgcttttcgtatggttcttaactaaa 29781077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 91
Target Start/End: Complemental strand, 33940775 - 33940724
Alignment:
Q  39 aaaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaatt 91  Q
    ||||||||| |||||||||||||||| ||| ||  ||||||||||||||||||    
T  33940775 aaaaactta-gtacaattccttaggtgtttgtcacatggttcttaactaaatt 33940724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 9e-18; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 35339282 - 35339340
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  35339282 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcatcatg 35339340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 24836187 - 24836129
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||||||||||||||||  ||||||||||||||||||||||||||| ||||    
T  24836187 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatg 24836129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 3953046 - 3953104
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||||||||||||| ||| ||||||||||||| ||||||||||||| ||||    
T  3953046 aaaacttaggtacaattccttatgtacttttcgtatggtttttaactaaattcaccatg 3953104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 10936474 - 10936532
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||||||||||||||||  |||||||| |||||||||||||||||| ||||    
T  10936474 aaaacttatgtacaattccttaggtgcttttcgtacggttcttaactaaattcaccatg 10936532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 20184242 - 20184300
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||||||||||||||||  |||||||||| |||||||||||||||| ||||    
T  20184242 aaaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaattcaccatg 20184300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 94
Target Start/End: Original strand, 25742439 - 25742493
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcat 94  Q
    |||||||| |||||||| ||||||| |||||| ||||||||||||||||||||||    
T  25742439 aaaacttatgtacaatttcttaggtgtttttcctatggttcttaactaaattcat 25742493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 30259070 - 30259128
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||||||||||||||||  ||||| ||||||||||||||||||||| ||||    
T  30259070 aaaacttaggtacaattccttaggtgcttttcctatggttcttaactaaattcaccatg 30259128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 31231618 - 31231676
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||||||||||||||||  |||| |||||||||||||||||||||| ||||    
T  31231618 aaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaattcaccatg 31231676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 34052446 - 34052388
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||||||||||||||||  ||||||||||||||||| ||||||||| ||||    
T  34052446 aaaacttaggtacaattccttaggtgcttttcgtatggttcttagctaaattcaccatg 34052388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 10936637 - 10936588
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  10936637 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 10936588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 31231783 - 31231734
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  31231783 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 31231734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 38528579 - 38528530
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  38528579 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 38528530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 33721831 - 33721879
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaa 88  Q
    |||||||| ||||||||||||||||  ||||||||||||||||||||||    
T  33721831 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaa 33721879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 39143873 - 39143826
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaacta 87  Q
    |||||||| ||||||||| |||||| ||||||||||||||||||||||    
T  39143873 aaaacttaggtacaattcattaggtgtttttcgtatggttcttaacta 39143826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 98
Target Start/End: Complemental strand, 30594856 - 30594802
Alignment:
Q  44 cttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||| |||||||||||||| |  ||||||||||||||||||||||||||| ||||    
T  30594856 cttaggtacaattccttagatgcttttcgtatggttcttaactaaattcaccatg 30594802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 39617845 - 39617903
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| |||||||| ||||| | || ||||||||||||||||||||||||| ||||    
T  39617845 aaaacttaggtacaatttcttagatgttcttcgtatggttcttaactaaattcaccatg 39617903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 12142351 - 12142302
Alignment:
Q  49 gtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    ||||||||||||| || |||||||||| ||||||||||||||||| ||||    
T  12142351 gtacaattccttatgtgtttttcgtatagttcttaactaaattcaccatg 12142302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 29277842 - 29277891
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||| ||||||| |||| ||||||||||||||||||    
T  29277842 aaaacttaggtacaattctttaggtactttttgtatggttcttaactaaa 29277891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 34052283 - 34052332
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||| ||||||||||  |||||||||||||||||||||||    
T  34052283 aaaacttaggtacatttccttaggtgcttttcgtatggttcttaactaaa 34052332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 35339445 - 35339396
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||| ||| |||||||||||||||||| ||||    
T  35339445 aaaacttaggtacaattccttatgtacttttcgtatggttcttaaataaa 35339396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 35665637 - 35665686
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||| |||||||  |||||||||||||||||||||||    
T  35665637 aaaacttaggtacaattgcttaggtgcttttcgtatggttcttaactaaa 35665686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 35665783 - 35665734
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  ||||||||||||| |||||||||    
T  35665783 aaaacttaggtacaattccttaggtgcttttcgtatggtttttaactaaa 35665734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 38883225 - 38883274
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||||||||| |  |||||||||||||||||||||||    
T  38883225 aaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 38883274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 38883388 - 38883339
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||||||||| |  |||||||||||||||||||||||    
T  38883388 aaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 38883339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 48103372 - 48103421
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||| ||||||| ||||||||||| ||||||||||||    
T  48103372 aaaacttaggtacaatttcttaggtgtttttcgtatgattcttaactaaa 48103421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 37093925 - 37093877
Alignment:
Q  50 tacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    ||||||| |||||||| ||||||||||||| ||||||||||||| ||||    
T  37093925 tacaatttcttaggtacttttcgtatggtttttaactaaattcaccatg 37093877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 98
Target Start/End: Complemental strand, 29278005 - 29277946
Alignment:
Q  39 aaaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    ||||||||| |||||||||||||  |||||| |||||| || ||||||||||||| ||||    
T  29278005 aaaaacttaggtacaattccttatatattttccgtatgatttttaactaaattcaccatg 29277946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 24836024 - 24836073
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||| |||||||  ||||||||||||||| |||||||    
T  24836024 aaaacttaggtacaattgcttaggtgcttttcgtatggttctnaactaaa 24836073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 33749787 - 33749753
Alignment:
Q  64 tatttttcgtatggttcttaactaaattcatcatg 98  Q
    ||||||| |||||||||||||||||||||||||||    
T  33749787 tattttttgtatggttcttaactaaattcatcatg 33749753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 3953209 - 3953160
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    ||||||||  ||||||| |||||||| |||| ||||||||||||||||||    
T  3953209 aaaacttagatacaattacttaggtactttttgtatggttcttaactaaa 3953160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 9285881 - 9285832
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||| ||| ||||||||| ||||||| |||||||||||||||||| ||||    
T  9285881 aaaatttaggtacaattctttaggtacttttcgtatggttcttaaataaa 9285832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 9289948 - 9289899
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||| ||| ||||||||| ||||||| |||||||||||||||||| ||||    
T  9289948 aaaatttaggtacaattctttaggtacttttcgtatggttcttaaataaa 9289899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 20184406 - 20184357
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||||||||| |  |||||||||| ||||||||||||    
T  20184406 aaaacttaggtacaattccttagctgcttttcgtatgattcttaactaaa 20184357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 30259233 - 30259184
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||||||| |||  |||| ||||||||||||||||||    
T  30259233 aaaacttaggtacaattccttgggtgctttttgtatggttcttaactaaa 30259184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 30594697 - 30594746
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||||| || |||||||||||||    
T  30594697 aaaacttaggtacaattccttaggtgcttttcgcatagttcttaactaaa 30594746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 33749648 - 33749696
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||| ||||| |||||||||||||||||| ||||||||||||    
T  33749648 aaaactta-gtataattctttaggtatttttcgtatgattcttaactaaa 33749696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 37093772 - 37093821
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||| ||| |||||||| ||||||||||||||||||| ||||||| ||||    
T  37093772 aaaatttaggtacaatttcttaggtatttttcgtatgattcttaattaaa 37093821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 47237595 - 47237546
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||| || ||||  |||||||||||||||||||||||    
T  47237595 aaaacttaggtacaatttctaaggtgcttttcgtatggttcttaactaaa 47237546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 38989084 - 38989132
Alignment:
Q  49 gtacaattccttaggtatttttcgtatggttcttaactaaattcatcat 97  Q
    |||||||| |||| ||||||||||||| ||| ||||||||||| |||||    
T  38989084 gtacaatttcttatgtatttttcgtatagtttttaactaaatttatcat 38989132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 48103532 - 48103480
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattc 92  Q
    ||||||||  |||||||| ||||||  |||| |||||||||||||||||||||    
T  48103532 aaaacttatctacaattctttaggtgctttttgtatggttcttaactaaattc 48103480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 109
Target Start/End: Complemental strand, 10553048 - 10552980
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatgtattttcgtat 109  Q
    |||||||| |||||||||||||||| ||||||||||| |||||||||||||||| |||| ||||||||||    
T  10553048 aaaacttaggtacaattccttaggtgtttttcgtatgattcttaactaaattcaccatg-attttcgtat 10552980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 2818833 - 2818775
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||||||||||| ||||    
T  2818833 aaaacttaggtacaattctttaggtgtttttcgtatggttcttaactaaattcaccatg 2818775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 1924148 - 1924099
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  1924148 aaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaa 1924099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 43858601 - 43858548
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattca 93  Q
    |||| ||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  43858601 aaaatttaggtacaattccttaggtacttttcgtatggttcttaactaaattca 43858548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 1923984 - 1924042
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| |||||||| |||||||  ||||||||||||||||||||||||||| ||||    
T  1923984 aaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaattcaccatg 1924042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 24101836 - 24101886
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaat 90  Q
    |||||||| ||||||||||||||||  ||||||||||||||||||||||||    
T  24101836 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaat 24101886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 43476113 - 43476055
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||| ||| ||| |||||||||||| |||||||||||||||||||||||||||| ||||    
T  43476113 aaaatttaggtataattccttaggtgtttttcgtatggttcttaactaaattcaccatg 43476055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 9281351 - 9281404
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattca 93  Q
    |||||||  ||||||||||||||||| ||||| |||||||||||||||||||||    
T  9281351 aaaactttggtacaattccttaggtacttttcatatggttcttaactaaattca 9281404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 9281514 - 9281465
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  9281514 aaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaa 9281465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 16705737 - 16705786
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  16705737 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 16705786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 22269889 - 22269840
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    ||||||||||||||||||||||| |  |||||||||||||||||||||||    
T  22269889 aaaacttacgtacaattccttagatgcttttcgtatggttcttaactaaa 22269840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 23835880 - 23835929
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  23835880 aaaacttatgtacaattccttaggtgcttttcgtatggttcttaactaaa 23835929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 24101999 - 24101950
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  24101999 aaaacttaagtacaattccttaggtgcttttcgtatggttcttaactaaa 24101950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 34490460 - 34490509
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  34490460 aaaacttaggtacaattctttaggtgtttttcgtatggttcttaactaaa 34490509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 34490623 - 34490574
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  34490623 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 34490574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 42713794 - 42713839
Alignment:
Q  53 aattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||    
T  42713794 aattccttaggtgtttttcgtatggttcttaactaaattcaccatg 42713839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 45408629 - 45408678
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||||||||||| ||||| ||||||||||||||||||    
T  45408629 aaaacttaggtacaattccttaggtgttttttgtatggttcttaactaaa 45408678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 7737232 - 7737181
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaatt 91  Q
    |||||||| ||||||||||||||||  |||||||||| ||||||||||||||    
T  7737232 aaaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaatt 7737181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 45408792 - 45408741
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaatt 91  Q
    |||||||| ||||||||||||||||  |||||||||||||||||| ||||||    
T  45408792 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaattaaatt 45408741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 94
Target Start/End: Complemental strand, 3117043 - 3116989
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcat 94  Q
    |||||||| |||||||||| ||| |  ||||||||||||||||||||||||||||    
T  3117043 aaaacttaggtacaattccatagctgcttttcgtatggttcttaactaaattcat 3116989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 16705900 - 16705847
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattca 93  Q
    |||| ||| ||||||||||||||||  ||||||||||||| |||||||||||||    
T  16705900 aaaatttaggtacaattccttaggtgcttttcgtatggtttttaactaaattca 16705847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 20892888 - 20892937
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||| |||||||  |||||||||||||||||||||||    
T  20892888 aaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaa 20892937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 22269726 - 22269775
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||||||||||| ||||||||||| || |||||||||    
T  22269726 aaaacttaggtacaattccttaggtgtttttcgtatgatttttaactaaa 22269775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 34455889 - 34455938
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||||||||||||||||| ||||    
T  34455889 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaattaaa 34455938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 50 - 91
Target Start/End: Original strand, 39242997 - 39243038
Alignment:
Q  50 tacaattccttaggtatttttcgtatggttcttaactaaatt 91  Q
    ||||||| ||||||||||||||||||| ||||||||||||||    
T  39242997 tacaatttcttaggtatttttcgtatgattcttaactaaatt 39243038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 2818671 - 2818719
Alignment:
Q  41 aaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    ||||||| ||||||||||||||||  |||||||||| ||||||||||||    
T  2818671 aaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaa 2818719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 12850546 - 12850597
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaatt 91  Q
    |||| ||| ||||||||||||||||| |||| |||||||| |||||||||||    
T  12850546 aaaatttaggtacaattccttaggtactttttgtatggtttttaactaaatt 12850597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 50 - 93
Target Start/End: Original strand, 17500020 - 17500063
Alignment:
Q  50 tacaattccttaggtatttttcgtatggttcttaactaaattca 93  Q
    ||||||| |||| || ||||||||||||||||||||||||||||    
T  17500020 tacaatttcttatgtgtttttcgtatggttcttaactaaattca 17500063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 27920739 - 27920681
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||||||||  |||| |  ||||||||||||||||||||||||||| ||||    
T  27920739 aaaacttaggtacaattttttagctgcttttcgtatggttcttaactaaattcaccatg 27920681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 3116880 - 3116929
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||| || |||  |||||||||||||||||||||||    
T  3116880 aaaacttaggtacaattcttttggtgcttttcgtatggttcttaactaaa 3116929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 7116374 - 7116423
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||| |||| || ||||||||||||||| |||||||    
T  7116374 aaaacttaggtacaattctttagatacttttcgtatggttctcaactaaa 7116423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 9933736 - 9933687
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||| ||| |||||||| |||||||  |||||||||||||||||||||||    
T  9933736 aaaatttaggtacaatttcttaggtgcttttcgtatggttcttaactaaa 9933687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 90
Target Start/End: Complemental strand, 17434839 - 17434798
Alignment:
Q  49 gtacaattccttaggtatttttcgtatggttcttaactaaat 90  Q
    |||||||||||||| | ||||||||||| |||||||||||||    
T  17434839 gtacaattccttagatgtttttcgtatgattcttaactaaat 17434798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 29229530 - 29229482
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||| |||| || |||||||||||||||||||||||    
T  29229530 aaaactta-gtacaattctttagttacttttcgtatggttcttaactaaa 29229482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 29342830 - 29342782
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||| |||| || |||||||||||||||||||||||    
T  29342830 aaaactta-gtacaattctttagttacttttcgtatggttcttaactaaa 29342782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 34456052 - 34455995
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcat 97  Q
    |||| ||| |||||||| |||| || ||||||||||||||| ||| ||||||||||||    
T  34456052 aaaatttaggtacaatttcttatgtgtttttcgtatggttcctaattaaattcatcat 34455995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 37340970 - 37341019
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||  ||| |||||||| ||||||||||||||||||    
T  37340970 aaaacttaggtacaattttttaagtattttttgtatggttcttaactaaa 37341019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 7116534 - 7116486
Alignment:
Q  43 acttacgtacaattccttaggtatttttcgtatggttcttaactaaatt 91  Q
    ||||| |||||||| ||||| | ||||||||||||||||||| ||||||    
T  7116534 acttaggtacaatttcttagatgtttttcgtatggttcttaaataaatt 7116486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 98
Target Start/End: Complemental strand, 40362623 - 40362591
Alignment:
Q  66 tttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||||||||||||||||||||||| ||||    
T  40362623 tttttcgtatggttcttaactaaattcaccatg 40362591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 5e-16; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 32237398 - 32237449
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaatt 91  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  32237398 aaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaatt 32237449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 10254736 - 10254678
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||| ||| ||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  10254736 aaaatttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcatcatg 10254678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 21969161 - 21969219
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||||||||||||||||  ||||||||||||||||||||||||||| ||||    
T  21969161 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatg 21969219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 21991597 - 21991655
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||||||||||||||||  ||||||||||||||||||||||||||| ||||    
T  21991597 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatg 21991655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 45487966 - 45487908
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||||||||||||||||  ||||||||||||||||||||||||||| ||||    
T  45487966 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatg 45487908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 4072441 - 4072392
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  4072441 aaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaa 4072392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 12789610 - 12789659
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  12789610 aaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaa 12789659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 26906621 - 26906568
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattca 93  Q
    |||||||| |||||||||||||| || |||||||||||||||||||||||||||    
T  26906621 aaaacttaggtacaattccttagatacttttcgtatggttcttaactaaattca 26906568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 36278760 - 36278813
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattca 93  Q
    |||||||| |||||||||||||| || |||||||||||||||||||||||||||    
T  36278760 aaaacttaggtacaattccttagatacttttcgtatggttcttaactaaattca 36278813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 50099601 - 50099548
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattca 93  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||||||||    
T  50099601 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattca 50099548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 3970495 - 3970553
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| || |||||||||||||  ||||||||||||||||||||||||||| ||||    
T  3970495 aaaacttaggtgcaattccttaggtgcttttcgtatggttcttaactaaattcaccatg 3970553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 4072277 - 4072335
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| |||||||| |||||||  ||||||||||||||||||||||||||| ||||    
T  4072277 aaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaattcaccatg 4072335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 12838244 - 12838186
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||||||||| |||||| |||||||||||||| ||||||||||||| ||||    
T  12838244 aaaacttatgtacaattctttaggtgtttttcgtatggtttttaactaaattcaccatg 12838186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 13078167 - 13078225
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| || |||||||||||||  ||||||||||||||||||||||||||| ||||    
T  13078167 aaaacttaggtgcaattccttaggtgcttttcgtatggttcttaactaaattcaccatg 13078225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 25446416 - 25446359
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||||||||||||||||  ||||||||||||||||||||||||||| ||||    
T  25446416 aaaactta-gtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatg 25446359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 3970658 - 3970609
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||| |||||||| |||||||||||||||||||||||    
T  3970658 aaaacttaggtacaatttcttaggtacttttcgtatggttcttaactaaa 3970609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 10117678 - 10117625
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattca 93  Q
    |||| ||| ||||||||||||||||  |||||||||||||||||||||||||||    
T  10117678 aaaatttaggtacaattccttaggtgcttttcgtatggttcttaactaaattca 10117625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 21969324 - 21969275
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  21969324 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 21969275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 21991760 - 21991711
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  21991760 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 21991711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 26906458 - 26906507
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  26906458 aaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaa 26906507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 36278923 - 36278874
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  36278923 aaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaa 36278874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 38125346 - 38125297
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  38125346 aaaacttaggtacaattcattaggtgtttttcgtatggttcttaactaaa 38125297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 39850348 - 39850397
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||| ||||||||||| ||||||||||||||||||||||||    
T  39850348 aaaacttaggtactattccttaggtgtttttcgtatggttcttaactaaa 39850397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 45487803 - 45487852
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  45487803 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 45487852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 55340461 - 55340412
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    ||||||||  |||||||||||||||||||||| |||||||||||||||||    
T  55340461 aaaacttagatacaattccttaggtatttttcatatggttcttaactaaa 55340412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 8831743 - 8831793
Alignment:
Q  39 aaaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    ||||||||| ||||||||||||||||  ||||||||||||||| |||||||    
T  8831743 aaaaacttaggtacaattccttaggtgcttttcgtatggttctaaactaaa 8831793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 8831908 - 8831850
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||||||||  ||||||  ||||||||||||||||||||||||||| ||||    
T  8831908 aaaacttaggtacaattttttaggtgcttttcgtatggttcttaactaaattcaccatg 8831850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 98
Target Start/End: Original strand, 25488349 - 25488403
Alignment:
Q  44 cttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||| ||||||||||||||||  ||||||||| ||||||||||||||||| ||||    
T  25488349 cttaagtacaattccttaggtgcttttcgtatagttcttaactaaattcaccatg 25488403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 98
Target Start/End: Complemental strand, 25561174 - 25561120
Alignment:
Q  44 cttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||| ||||||||||||||||  ||||||||| ||||||||||||||||| ||||    
T  25561174 cttaagtacaattccttaggtgcttttcgtatagttcttaactaaattcaccatg 25561120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 35368900 - 35368842
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| |||||||| |||| || |||||||||||||| ||||||||||||| ||||    
T  35368900 aaaacttaggtacaatttcttatgtgtttttcgtatggtttttaactaaattcaccatg 35368842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 42105386 - 42105440
Alignment:
Q  39 aaaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattca 93  Q
    ||||||||| |||||||| | |||||| ||||| |||||||||||||||||||||    
T  42105386 aaaaacttaggtacaatttcataggtacttttcttatggttcttaactaaattca 42105440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 44611386 - 44611443
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||||||||||||||||| |||| |||| ||||||||||||||||| ||||    
T  44611386 aaaactta-gtacaattccttaggtactttttgtatagttcttaactaaattcaccatg 44611443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 1476718 - 1476669
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  ||||| |||||||||||||||||    
T  1476718 aaaacttaggtacaattccttaggtgcttttcatatggttcttaactaaa 1476669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 5529895 - 5529944
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||| |||||||  |||||||||||||||||||||||    
T  5529895 aaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaa 5529944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 10017118 - 10017167
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  ||||| |||||||||||||||||    
T  10017118 aaaacttaggtacaattccttaggtgcttttcatatggttcttaactaaa 10017167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 10254572 - 10254621
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  ||||| |||||||||||||||||    
T  10254572 aaaacttaggtacaattccttaggtgcttttcatatggttcttaactaaa 10254621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 12838081 - 12838130
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||| ||||||||||||||||||    
T  12838081 aaaacttatgtacaattccttaggtgctttttgtatggttcttaactaaa 12838130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 13078330 - 13078281
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||| |||||||| |||||||||| ||||||||||||    
T  13078330 aaaacttaggtacaatttcttaggtacttttcgtatgattcttaactaaa 13078281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 22101332 - 22101279
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattca 93  Q
    |||||||| ||||||||||||| |   |||||||||||||||||||||||||||    
T  22101332 aaaacttaggtacaattccttatgagcttttcgtatggttcttaactaaattca 22101279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 22176276 - 22176223
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattca 93  Q
    |||||||| ||||||||||||| ||  |||| ||||||||||||||||||||||    
T  22176276 aaaacttaggtacaattccttatgtgctttttgtatggttcttaactaaattca 22176223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 25488508 - 25488459
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||| ||||||||||||||||||    
T  25488508 aaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 25488459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 25561015 - 25561064
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||| ||||||||||||||||||    
T  25561015 aaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 25561064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 26977009 - 26976960
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||| |||||| |||||||||||||| |||||||||    
T  26977009 aaaacttaggtacaattctttaggtgtttttcgtatggtttttaactaaa 26976960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 32237561 - 32237512
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||||||||||||||||| ||||    
T  32237561 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaattaaa 32237512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 32362865 - 32362914
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    ||||||||  |||||||| |||||| ||||||||||||||||||||||||    
T  32362865 aaaacttaactacaattctttaggtgtttttcgtatggttcttaactaaa 32362914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 35368553 - 35368602
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||| ||  |||||||||||||||||||||||    
T  35368553 aaaacttaggtacaattccttatgtgcttttcgtatggttcttaactaaa 35368602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 36657437 - 36657486
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||||||||| |  |||||||||||||||||||||||    
T  36657437 aaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 36657486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 36657600 - 36657551
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||||||||| |  |||||||||||||||||||||||    
T  36657600 aaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 36657551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 36822764 - 36822813
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||||||||| |  |||||||||||||||||||||||    
T  36822764 aaaacttaggtacaattccttagctgcttttcgtatggttcttaactaaa 36822813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 37506293 - 37506244
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||| |||||| |||||||| |||||||||||||||    
T  37506293 aaaacttatgtacaattctttaggtgtttttcgtgtggttcttaactaaa 37506244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 39850512 - 39850463
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||||||||| ||||||||||||    
T  39850512 aaaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaa 39850463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 43639249 - 43639200
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||||||||| ||||||||||||    
T  43639249 aaaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaa 43639200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 45713070 - 45713021
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  ||||||||||||||| |||||||    
T  45713070 aaaacttaggtacaattccttaggtgcttttcgtatggttctaaactaaa 45713021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 46664180 - 46664229
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||| ||| |||||||| |||||||||||||||||| |||||||||||||    
T  46664180 aaaatttaggtacaatttcttaggtatttttcgtatagttcttaactaaa 46664229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 91
Target Start/End: Original strand, 297540 - 297592
Alignment:
Q  39 aaaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaatt 91  Q
    ||||||||| |||||||||||| |||  ||||||||||||||||| |||||||    
T  297540 aaaaacttaggtacaattcctttggtgcttttcgtatggttcttagctaaatt 297592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 46222042 - 46222090
Alignment:
Q  50 tacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    ||||||| ||||||| |||||||||||||| ||||||||||||| ||||    
T  46222042 tacaatttcttaggtgtttttcgtatggtttttaactaaattcaccatg 46222090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 98
Target Start/End: Original strand, 1476554 - 1476613
Alignment:
Q  39 aaaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    ||||||||| ||||||||||||||||  |||| |||||||||| | ||||||||| ||||    
T  1476554 aaaaacttaggtacaattccttaggtgcttttggtatggttctaacctaaattcaccatg 1476613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 26977857 - 26977806
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaatt 91  Q
    |||||||| |||||||| ||||| || ||||| |||||||||||||||||||    
T  26977857 aaaacttaggtacaatttcttagatacttttcatatggttcttaactaaatt 26977806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 89
Target Start/End: Complemental strand, 44611545 - 44611499
Alignment:
Q  43 acttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    ||||| |||||||||||||||| ||||| |||||||| |||||||||    
T  44611545 acttaggtacaattccttaggtgttttttgtatggtttttaactaaa 44611499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 404048 - 404097
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    ||||||||||||||||| |||||||  |||||||||| || |||||||||    
T  404048 aaaacttacgtacaatttcttaggtgcttttcgtatgatttttaactaaa 404097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 10117519 - 10117568
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||| ||||||||||  ||||| |||||||||||||||||    
T  10117519 aaaacttaggtacagttccttaggtgcttttcatatggttcttaactaaa 10117568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 10441262 - 10441311
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||| ||||| ||||||||||||    
T  10441262 aaaacttaagtacaattccttaggtgcttttggtatgattcttaactaaa 10441311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 10441425 - 10441376
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||| ||| ||||||||||||||    
T  10441425 aaaacttaggtacaattccttaggtgcttttggtacggttcttaactaaa 10441376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 36822927 - 36822878
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||  ||||||  |||||||||||||||||||||||    
T  36822927 aaaacttaggtacaattttttaggtgcttttcgtatggttcttaactaaa 36822878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 42105550 - 42105501
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||| | ||||| ||||| ||||||||||||||||||    
T  42105550 aaaacttaagtacaatttcgtaggtgttttttgtatggttcttaactaaa 42105501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 10017276 - 10017232
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaa 84  Q
    |||| ||| ||||||||||||||||  ||||||||||||||||||    
T  10017276 aaaatttaggtacaattccttaggtgcttttcgtatggttcttaa 10017232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 21379945 - 21380003
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||||||||||||||||  ||||||||||||||||||||||||||| ||||    
T  21379945 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatg 21380003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 4890484 - 4890535
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaatt 91  Q
    |||||||| |||||||| ||||||| ||||||||||||||||||||||||||    
T  4890484 aaaacttaggtacaatttcttaggtgtttttcgtatggttcttaactaaatt 4890535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 885552 - 885494
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||||||||||||||||  ||||| |||| |||||||||||||||||||||    
T  885552 aaaacttaggtacaattccttaggtgcttttcctatgattcttaactaaattcatcatg 885494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 29609169 - 29609115
Alignment:
Q  39 aaaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattca 93  Q
    |||||||||||||||||||||||| |  ||||||||||||| |||||||||||||    
T  29609169 aaaaacttacgtacaattccttagatgcttttcgtatggtttttaactaaattca 29609115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 7808776 - 7808727
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  7808776 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 7808727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 8091229 - 8091176
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattca 93  Q
    |||||||| |||||||| |||||||  |||||||||||||||||||||||||||    
T  8091229 aaaacttaggtacaattgcttaggtgcttttcgtatggttcttaactaaattca 8091176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 20501710 - 20501759
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    ||||||||  ||||||||||||||| ||||||||||||||||||||||||    
T  20501710 aaaacttagttacaattccttaggtgtttttcgtatggttcttaactaaa 20501759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 21380108 - 21380059
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  21380108 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 21380059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 15546799 - 15546748
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaatt 91  Q
    |||||||| ||||||||||||||||  |||||||||||||||||| ||||||    
T  15546799 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaattaaatt 15546748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 94
Target Start/End: Original strand, 6433694 - 6433748
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcat 94  Q
    |||||||| ||| |||| |||||||  ||||||||||||||||||||||||||||    
T  6433694 aaaacttaggtataatttcttaggtgcttttcgtatggttcttaactaaattcat 6433748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 94
Target Start/End: Original strand, 13172578 - 13172632
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcat 94  Q
    |||||||| |||||||||  ||| | |||||||||||||||||||||||||||||    
T  13172578 aaaacttaggtacaattctctagatgtttttcgtatggttcttaactaaattcat 13172632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 13439863 - 13439805
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| |||||||| |  |||| |||||||||||||||||||||||||||| ||||    
T  13439863 aaaacttaggtacaattacgcaggtgtttttcgtatggttcttaactaaattcaccatg 13439805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 14393731 - 14393673
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||| ||||||||||||  |||| |||||||||||||||||||||| ||||    
T  14393731 aaaacttaggtataattccttaggtgctttttgtatggttcttaactaaattcaccatg 14393673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 18998121 - 18998178
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| |||||||||||||||| |||||||||  ||||||||||||||||| ||||    
T  18998121 aaaacttaggtacaattccttaggtgtttttcgta-cgttcttaactaaattcaccatg 18998178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 885389 - 885438
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||| ||||||||||||||||||    
T  885389 aaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 885438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 3368989 - 3369038
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||  ||||||||||||||||  |||||||||||||||||||||||    
T  3368989 aaaacttgagtacaattccttaggtgcttttcgtatggttcttaactaaa 3369038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 4890648 - 4890599
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||| ||| ||||||||||||||||  |||||||||||||||||||||||    
T  4890648 aaaatttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 4890599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 7808613 - 7808662
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||||||||||| |||||||| ||||| |||||||||    
T  7808613 aaaacttaggtacaattccttaggtgtttttcgtttggtttttaactaaa 7808662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 11687147 - 11687196
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||||||||| |  |||||||||||||||||||||||    
T  11687147 aaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 11687196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 11687310 - 11687261
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||||||||| |  |||||||||||||||||||||||    
T  11687310 aaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 11687261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 13439699 - 13439748
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||| ||| ||||||||||||||||| |||||    
T  13439699 aaaacttaggtacaattccttaagtacttttcgtatggttcttagctaaa 13439748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 15546636 - 15546685
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||||||||| | ||||| ||||||||||||||||||    
T  15546636 aaaacttaggtacaattccttagttgttttttgtatggttcttaactaaa 15546685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 17279528 - 17279577
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    ||||||||  ||||||| ||||||||||||||||||||||||||| ||||    
T  17279528 aaaacttatctacaatttcttaggtatttttcgtatggttcttaattaaa 17279577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 50 - 89
Target Start/End: Original strand, 8091076 - 8091115
Alignment:
Q  50 tacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  8091076 tacaattccttaggtgcttttcgtatggttcttaactaaa 8091115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 20501873 - 20501824
Alignment:
Q  39 aaaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    ||||||||| |||||||| |||||||  |||||||||||||||||||||||    
T  20501873 aaaaactta-gtacaatttcttaggtgcttttcgtatggttcttaactaaa 20501824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 31764493 - 31764443
Alignment:
Q  39 aaaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    ||||||||| |||||||| ||||| || ||||||||| |||||||||||||    
T  31764493 aaaaacttaggtacaatttcttagatacttttcgtatagttcttaactaaa 31764443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 89
Target Start/End: Original strand, 14393574 - 14393614
Alignment:
Q  49 gtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    ||||||||||||||||  |||||||||| ||||||||||||    
T  14393574 gtacaattccttaggtgcttttcgtatgattcttaactaaa 14393614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 17279691 - 17279636
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| |||||||| ||||||| ||   ||||| ||||||||||||||||||||||    
T  17279691 aaaacttaggtacaatttcttaggtgtt---cgtatagttcttaactaaattcatcatg 17279636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 24915798 - 24915856
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||||||||||||||||  ||||||||||||||||||||||||||| ||||    
T  24915798 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatg 24915856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 43486204 - 43486262
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||||||||||||||||| ||||| ||||||||||||||||||||| ||||    
T  43486204 aaaacttaggtacaattccttaggtacttttcctatggttcttaactaaattcaccatg 43486262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 42274660 - 42274611
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  42274660 aaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaa 42274611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 98
Target Start/End: Original strand, 9355556 - 9355615
Alignment:
Q  39 aaaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| |||||||||||||||||  ||||| ||||||||||||||||||||| ||||    
T  9355556 aaaaacttccgtacaattccttaggtgcttttcatatggttcttaactaaattcaccatg 9355615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 27434777 - 27434726
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaatt 91  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||||||    
T  27434777 aaaacttaagtacaattccttaggtgcttttcgtatggttcttaactaaatt 27434726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 1299079 - 1299021
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||||||||||||||||  ||||| ||||||||||||||||||||| ||||    
T  1299079 aaaacttaggtacaattccttaggtgcttttcttatggttcttaactaaattcaccatg 1299021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 13204544 - 13204486
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||||||||||||| ||| ||||||||||||| ||||||||||||| ||||    
T  13204544 aaaacttaggtacaattccttatgtacttttcgtatggtttttaactaaattcaccatg 13204486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 20435144 - 20435202
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    ||||||||  ||||||||||||| |  ||||||||||||||||||||||||||||||||    
T  20435144 aaaacttatatacaattccttagatgcttttcgtatggttcttaactaaattcatcatg 20435202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 24969545 - 24969603
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||||||||| ||||||  ||||||||||||||||||||||||||| ||||    
T  24969545 aaaacttaggtacaattctttaggtgcttttcgtatggttcttaactaaattcaccatg 24969603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 32318724 - 32318782
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||||||||||||| ||  ||||||||||||||||||||||||||| ||||    
T  32318724 aaaacttaggtacaattccttatgtgcttttcgtatggttcttaactaaattcaccatg 32318782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 42274496 - 42274554
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| |||||||||||||| |  ||||||||||||||||||||||||||| ||||    
T  42274496 aaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaattcaccatg 42274554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 530673 - 530726
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattca 93  Q
    |||||||| ||||||||||||||||  |||| ||||||||||||||||||||||    
T  530673 aaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaattca 530726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 530836 - 530787
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  530836 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 530787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 4688251 - 4688304
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattca 93  Q
    |||||||| |||||||| |||||||  |||||||||||||||||||||||||||    
T  4688251 aaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaattca 4688304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 18417661 - 18417710
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  18417661 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 18417710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 52824243 - 52824292
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  52824243 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 52824292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 55049404 - 55049457
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattca 93  Q
    |||||||| ||||||||||||||||  ||||||||| |||||||||||||||||    
T  55049404 aaaacttatgtacaattccttaggtgcttttcgtatagttcttaactaaattca 55049457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 18417824 - 18417766
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||||||||||||||||  |||| ||||||||||||| |||||||| ||||    
T  18417824 aaaacttaggtacaattccttaggtgctttttgtatggttcttaattaaattcaccatg 18417766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 21048709 - 21048767
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||||||||| |||| |  ||||||||||||||||||||||||||| ||||    
T  21048709 aaaacttaggtacaattcgttagatgcttttcgtatggttcttaactaaattcaccatg 21048767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 23928572 - 23928629
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| |||||||||||||| | ||||||||||| |||||||||||||||| ||||    
T  23928572 aaaacttaggtacaattccttag-tgtttttcgtatgattcttaactaaattcaccatg 23928629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 1298916 - 1298965
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||| ||||||||||||||||||    
T  1298916 aaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 1298965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 3422596 - 3422547
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||| |||||| |||||||||||||| |||||||||    
T  3422596 aaaacttaggtacaattctttaggtgtttttcgtatggtttttaactaaa 3422547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 20435307 - 20435258
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||| ||||||  |||||||||||||||||||||||    
T  20435307 aaaacttaggtacaattctttaggtgcttttcgtatggttcttaactaaa 20435258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 24294636 - 24294581
Alignment:
Q  41 aaacttacgtacaattccttaggta---tttttcgtatggttcttaactaaattca 93  Q
    ||||||| ||||||||||||||||    ||||||||||||||||||||||||||||    
T  24294636 aaacttaggtacaattccttaggtggtgtttttcgtatggttcttaactaaattca 24294581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 24969711 - 24969662
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  ||||||||| |||||||||||||    
T  24969711 aaaacttaggtacaattccttaggtgcttttcgtatagttcttaactaaa 24969662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 35360681 - 35360729
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||  |||||||||||||||||||||||||||||||    
T  35360681 aaaactta-gtacaatttattaggtatttttcgtatggttcttaactaaa 35360729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 98
Target Start/End: Original strand, 16995558 - 16995616
Alignment:
Q  39 aaaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    ||||||||| |||||||||||| ||| |||||||||||||| |||| |||||||| ||||    
T  16995558 aaaaacttaggtacaattcctt-ggtgtttttcgtatggtttttaattaaattcaacatg 16995616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 55107691 - 55107640
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaatt 91  Q
    |||||||| ||||||||||||||||  |||| ||||||||||| ||||||||    
T  55107691 aaaacttaggtacaattccttaggtgctttttgtatggttctttactaaatt 55107640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 4552952 - 4552894
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| |||||||||||||  |  |||  |||||||||||||||||||||||||||    
T  4552952 aaaacttaggtacaattccttatatgctttctgtatggttcttaactaaattcatcatg 4552894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 35360842 - 35360785
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||||||||  |||| | |||||||||||||||||||||||||||| ||||    
T  35360842 aaaactta-gtacaattttttagttgtttttcgtatggttcttaactaaattcaccatg 35360785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 4688415 - 4688366
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||||||||| |  |||||||||||||||||| ||||    
T  4688415 aaaacttaggtacaattccttagatgattttcgtatggttcttaattaaa 4688366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 13204381 - 13204430
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    ||||||||  ||||||| |||||||| |||| ||||||||||||||||||    
T  13204381 aaaacttagatacaattacttaggtactttttgtatggttcttaactaaa 13204430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 23928734 - 23928685
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  ||| |||||| ||||||||||||    
T  23928734 aaaacttatgtacaattccttaggtgctttgcgtatgattcttaactaaa 23928685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 36030943 - 36030996
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattca 93  Q
    |||| ||| ||||||||||||| ||  |||||||||| ||||||||||||||||    
T  36030943 aaaagttaggtacaattccttacgtgcttttcgtatgtttcttaactaaattca 36030996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 37525110 - 37525061
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||| ||||||  ||||||| |||||||||||||||    
T  37525110 aaaacttaggtacaattctttaggtgcttttcgtgtggttcttaactaaa 37525061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 55107528 - 55107577
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||| ||  ||||| |||||||||||||||||    
T  55107528 aaaacttaggtacaattccttatgtgcttttcatatggttcttaactaaa 55107577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 27240928 - 27240986
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||||||||||||||||  ||||||||||||||||||||||||||| ||||    
T  27240928 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatg 27240986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 2854536 - 2854589
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattca 93  Q
    |||||||| |||||||||||||| || |||||||||||||||||||||||||||    
T  2854536 aaaacttaggtacaattccttagatacttttcgtatggttcttaactaaattca 2854589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 4299562 - 4299513
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  4299562 aaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaa 4299513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 14387182 - 14387133
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  14387182 aaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaa 14387133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 23698506 - 23698559
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattca 93  Q
    |||||||| |||||||||||||| || |||||||||||||||||||||||||||    
T  23698506 aaaacttaggtacaattccttagatacttttcgtatggttcttaactaaattca 23698559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 27928465 - 27928416
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  27928465 aaaacttatgtacaattccttaggtgtttttcgtatggttcttaactaaa 27928416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 47940738 - 47940689
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  47940738 aaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaa 47940689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 48954218 - 48954271
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattca 93  Q
    |||||||| ||||||||||||||||| ||||| |||||||||||||||||||||    
T  48954218 aaaacttaggtacaattccttaggtacttttcatatggttcttaactaaattca 48954271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 25298014 - 25297966
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaa 88  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||    
T  25298014 aaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaa 25297966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 44 - 98
Target Start/End: Original strand, 42561303 - 42561357
Alignment:
Q  44 cttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||| ||||||||||||||||  ||||||||||||||||||||||||||| ||||    
T  42561303 cttaagtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatg 42561357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 47940574 - 47940632
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| |||||||| |||||||  ||||||||||||||||||||||||||| ||||    
T  47940574 aaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaattcaccatg 47940632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 51789601 - 51789659
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||||||||||||||||  ||||||||||||| ||||||||||||| ||||    
T  51789601 aaaacttaggtacaattccttaggtgattttcgtatggtttttaactaaattcaccatg 51789659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 2854699 - 2854650
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  2854699 aaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaa 2854650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 5189473 - 5189522
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  5189473 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 5189522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 9978219 - 9978170
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  9978219 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 9978170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 19797148 - 19797099
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  19797148 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 19797099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 19955078 - 19955029
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||| |||| ||||||||||||||||||    
T  19955078 aaaacttaggtacaattccttaggtactttttgtatggttcttaactaaa 19955029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 21930545 - 21930492
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattca 93  Q
    |||| ||| |||||||| ||||||| ||||||||||||||||||||||||||||    
T  21930545 aaaatttaggtacaattacttaggtgtttttcgtatggttcttaactaaattca 21930492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 23698669 - 23698620
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  23698669 aaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaa 23698620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 27926419 - 27926370
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  27926419 aaaacttatgtacaattccttaggtgcttttcgtatggttcttaactaaa 27926370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 29598504 - 29598451
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattca 93  Q
    |||||||| ||||||||| ||||||| |||| ||||||||||||||||||||||    
T  29598504 aaaacttaggtacaattcgttaggtactttttgtatggttcttaactaaattca 29598451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 48954381 - 48954332
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  48954381 aaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaa 48954332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 49285142 - 49285093
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  49285142 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 49285093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 50162542 - 50162595
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattca 93  Q
    |||||||| |||||||||||||||||||||| |||||||| |||| ||||||||    
T  50162542 aaaacttaggtacaattccttaggtattttttgtatggtttttaattaaattca 50162595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 98
Target Start/End: Original strand, 49284297 - 49284356
Alignment:
Q  39 aaaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    ||||||||| |||||||| ||||| | ||||| |||||||||||||||||||||| ||||    
T  49284297 aaaaacttaggtacaatttcttagttgttttttgtatggttcttaactaaattcaccatg 49284356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 957756 - 957698
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    ||||||||  ||||||| ||||||| ||||||||||| |||||||||||||||| ||||    
T  957756 aaaacttagatacaatttcttaggtgtttttcgtatgattcttaactaaattcaccatg 957698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 5189636 - 5189578
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||| ||| |||||||||||||| |  ||||||||||||||||||||||||||| ||||    
T  5189636 aaaatttaggtacaattccttagatgcttttcgtatggttcttaactaaattcaccatg 5189578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 14387019 - 14387077
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| |||||||||||||| |   |||||||||||||||||||||||||| ||||    
T  14387019 aaaacttaggtacaattccttagatgcatttcgtatggttcttaactaaattcaccatg 14387077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 19954915 - 19954973
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||||||||||||| ||  ||||||||| ||||||||||||||||| ||||    
T  19954915 aaaacttaggtacaattccttatgtgcttttcgtatagttcttaactaaattcaccatg 19954973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 40647285 - 40647227
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||||||||||||||||  |||||||||| || ||||||||||||| ||||    
T  40647285 aaaacttaggtacaattccttaggtgcttttcgtatgatttttaactaaattcaccatg 40647227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 1387945 - 1387896
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||| ||| ||||||||||||||||  |||||||||||||||||||||||    
T  1387945 aaaatttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 1387896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 3607896 - 3607847
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||| |||||||  |||||||||||||||||||||||    
T  3607896 aaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaa 3607847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 15324630 - 15324679
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||| |||||||  |||||||||||||||||||||||    
T  15324630 aaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaa 15324679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 15324794 - 15324741
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattca 93  Q
    |||| ||| ||||||||||||| ||  |||||||||||||||||||||||||||    
T  15324794 aaaatttatgtacaattccttatgtgcttttcgtatggttcttaactaaattca 15324741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 16755229 - 16755278
Alignment:
Q  41 aaacttacgtacaattccttaggta-tttttcgtatggttcttaactaaa 89  Q
    ||||||||||||||||||||||||| |||||| ||| |||||||||||||    
T  16755229 aaacttacgtacaattccttaggtactttttcatatagttcttaactaaa 16755278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 26208592 - 26208539
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattca 93  Q
    |||||||| ||| ||||||||||||  ||||||||||||||| |||||||||||    
T  26208592 aaaacttatgtataattccttaggtgcttttcgtatggttctgaactaaattca 26208539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 27926255 - 27926308
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattca 93  Q
    |||||||| ||| ||||||||| ||  |||||||||||||||||||||||||||    
T  27926255 aaaacttaggtataattccttatgtgcttttcgtatggttcttaactaaattca 27926308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 36880678 - 36880629
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||||||||| |  |||||||||||||||||||||||    
T  36880678 aaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 36880629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 42561462 - 42561413
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||| ||||||||||||||||||    
T  42561462 aaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 42561413  T

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Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 50162706 - 50162657
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||| ||||||||||||||||||    
T  50162706 aaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 50162657  T

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Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 50627135 - 50627184
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||||||||| |  |||||||||||||||||||||||    
T  50627135 aaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 50627184  T

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Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 50 - 89
Target Start/End: Original strand, 21930394 - 21930433
Alignment:
Q  50 tacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    ||||||||||||| | ||||||||||||||||||||||||    
T  21930394 tacaattccttagttgtttttcgtatggttcttaactaaa 21930433  T

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Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 98
Target Start/End: Complemental strand, 27670299 - 27670252
Alignment:
Q  51 acaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    ||||||||||| ||  ||||||||||||| ||||||||||||||||||    
T  27670299 acaattccttatgtgcttttcgtatggtttttaactaaattcatcatg 27670252  T

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Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 3607733 - 3607791
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||| ||| ||| |||| |||||||  |||| |||||||||||||||||||||||||||    
T  3607733 aaaatttaggtagaatttcttaggtgctttttgtatggttcttaactaaattcatcatg 3607791  T

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Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 27928301 - 27928355
Alignment:
Q  39 aaaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattca 93  Q
    |||||||||  |||||||||||| ||  |||| ||||||||||||||||||||||    
T  27928301 aaaaacttagatacaattccttatgtgctttttgtatggttcttaactaaattca 27928355  T

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Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 87
Target Start/End: Original strand, 46691164 - 46691202
Alignment:
Q  49 gtacaattccttaggtatttttcgtatggttcttaacta 87  Q
    ||||||||| ||||||||||||||||| |||||||||||    
T  46691164 gtacaattcattaggtatttttcgtatcgttcttaacta 46691202  T

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Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 9978055 - 9978108
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattca 93  Q
    |||| ||| ||||||||||||| ||  |||||||||| ||||||||||||||||    
T  9978055 aaaatttaggtacaattccttatgtgcttttcgtatgattcttaactaaattca 9978108  T

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Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 19796985 - 19797034
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||| |||||||  ||||||||||||| |||||||||    
T  19796985 aaaacttaggtacaatttcttaggtgcttttcgtatggtttttaactaaa 19797034  T

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Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 27241091 - 27241042
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||| ||||||  ||| |||||||||||||||||||    
T  27241091 aaaacttaggtacaattcgttaggtgctttgcgtatggttcttaactaaa 27241042  T

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Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 50627298 - 50627249
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||||||||  |  |||||||||||||||||||||||    
T  50627298 aaaacttaggtacaattccttatatgcttttcgtatggttcttaactaaa 50627249  T

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Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 51276862 - 51276813
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||| |||||||  ||||||||||||||||| |||||    
T  51276862 aaaacttaggtacaatttcttaggtgcttttcgtatggttcttagctaaa 51276813  T

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Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 51789762 - 51789713
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| |||||||||||||  |  |||||||||||||||||||||||    
T  51789762 aaaacttaggtacaattccttaaatgcttttcgtatggttcttaactaaa 51789713  T

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Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 2125084 - 2125132
Alignment:
Q  50 tacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    ||||||| |||| ||  ||||||||||||||||||||||||||| ||||    
T  2125084 tacaatttcttatgtgcttttcgtatggttcttaactaaattcaccatg 2125132  T

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Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 28431716 - 28431764
Alignment:
Q  50 tacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||  |||| ||||||||||||| || ||||||||||||||||||    
T  28431716 tacaattttttagatatttttcgtatgatttttaactaaattcatcatg 28431764  T

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Target: scaffold0107 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 51230 - 51177
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattca 93  Q
    |||||||| ||||||||||||||||| ||||| |||||||||||||||||||||    
T  51230 aaaacttaggtacaattccttaggtacttttcatatggttcttaactaaattca 51177  T

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Target: scaffold0107; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 51067 - 51116
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  51067 aaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaa 51116  T

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Target: scaffold0188 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 7253 - 7195
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||| ||| |||| |||||||||||  ||||||||||||||||||||||||||||||||    
T  7253 aaaatttaggtacgattccttaggtgcttttcgtatggttcttaactaaattcatcatg 7195  T

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Target: scaffold0188; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 7090 - 7139
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||| ||| |||||||||||||||| ||||||||||| ||||||||||||    
T  7090 aaaatttaggtacaattccttaggtgtttttcgtatgattcttaactaaa 7139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 46001 - 45943
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||||||||||||||||  ||||| ||||||||||||||||||||| ||||    
T  46001 aaaacttaggtacaattccttaggtgcttttcttatggttcttaactaaattcaccatg 45943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 45838 - 45887
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  |||| ||||||||||||||||||    
T  45838 aaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 45887  T

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Target: scaffold0595 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 5874 - 5814
Alignment:
Q  40 aaaacttacgtacaatt--ccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||| ||||||||  ||||||||  ||||||||||||||||||||||||||| ||||    
T  5874 aaaacttaggtacaattttccttaggtgcttttcgtatggttcttaactaaattcaccatg 5814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 5705 - 5754
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||| | ||||||||| ||||||  |||||||||||||||||||||||    
T  5705 aaaactaaggtacaattctttaggtgcttttcgtatggttcttaactaaa 5754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 10120 - 10169
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||| |||||||||||| |||| |||||||||||||||||||    
T  10120 aaaacttaggtataattccttaggtgttttgcgtatggttcttaactaaa 10169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 14609 - 14556
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattca 93  Q
    |||||||| |||||||||||| |||  ||||||||| |||||||||||||||||    
T  14609 aaaacttaggtacaattccttgggtgcttttcgtatcgttcttaactaaattca 14556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 26409 - 26458
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  ||||||||||||| |||||||||    
T  26409 aaaacttaggtacaattccttaggtgcttttcgtatggttattaactaaa 26458  T

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Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 138290 - 138339
Alignment:
Q  49 gtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    |||||||||||||||   |||||||||| |||||||||||||||||||||    
T  138290 gtacaattccttaggagcttttcgtatgattcttaactaaattcatcatg 138339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 48293 - 48235
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaattcatcatg 98  Q
    ||||||||  ||||||||||||| |  ||||||||| ||||||||||||||||| ||||    
T  48293 aaaacttagatacaattccttagatgcttttcgtatagttcttaactaaattcaccatg 48235  T

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Target: scaffold0653 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 3560 - 3511
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||| ||| ||||||||| ||||||| |||||||||||||||||| ||||    
T  3560 aaaatttaggtacaattctttaggtacttttcgtatggttcttaaataaa 3511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 2107 - 2058
Alignment:
Q  40 aaaacttacgtacaattccttaggtatttttcgtatggttcttaactaaa 89  Q
    |||||||| ||||||||||||||||  ||||  |||||||||||||||||    
T  2107 aaaacttaggtacaattccttaggtgctttttatatggttcttaactaaa 2058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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