View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19548_low_1 (Length: 943)
Name: NF19548_low_1
Description: NF19548
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19548_low_1 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 783; Significance: 0; HSPs: 17)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 783; E-Value: 0
Query Start/End: Original strand, 18 - 929
Target Start/End: Original strand, 4009050 - 4009971
Alignment:
| Q |
18 |
caggttggtcatcttagcaaatacatgagggcttaacttcagcttcctgattgctgacaagtctacacgtatgcttctaatagcatcagtgccctgccat |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
4009050 |
caggttggtcatcttagcaaatacatgagggcttaacttcagcttcctgatcgctgacaagtctacacgtatgcttctaataacatcagtgccctgccat |
4009149 |
T |
|
| Q |
118 |
tgatgtaaaagaaaatcaaaatattttttaccaaaattacaaatgttatctaaaatcgccaaatatattataccttgtcgtttttcaatacatcatagat |
217 |
Q |
| |
|
| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
4009150 |
taatgtaaaagaaaatcaaaatactttttaccaaaatgacaaatgttatctaaaattgccaaatatattttaccttgtcgtttttcaatacatcatagat |
4009249 |
T |
|
| Q |
218 |
aatatcaggatcccataatcgactgcattttctagggtcttcactagattcttgacgaacaacctcccgacccatttcttgtagaatgtcatgcatagat |
317 |
Q |
| |
|
||||||||||||||||| | ||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4009250 |
aatatcaggatcccatagttgactgcattttataggatcttcactagattcttaacgaacaacctcccgacccatttcttgtagaatgtcatgcatagat |
4009349 |
T |
|
| Q |
318 |
ataacattatcttcagaaatagttataagagatttatcttttaacctttctaacccaatagccactgcattatcactttcaaaatctttcagtaaaagtt |
417 |
Q |
| |
|
|| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
4009350 |
attacattatcttcagaaattgttataagagctttatcttttaacctttctaacccaatagccactgcattatcactttcaaaatctttcaataaaagtt |
4009449 |
T |
|
| Q |
418 |
tcatgtaatccactttcaacctcaaccctttgaagaaacatgcaatatctaaaaaatacttttgctctaaacgatcaagatcatcataactgagcctcat |
517 |
Q |
| |
|
||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4009450 |
tcatgcaatccactttcaacctcaacccgttgaagaaacatgcaatatctaaaaaatacttttgctctaaacgatcaagatcatcataactgagcctcat |
4009549 |
T |
|
| Q |
518 |
tacatcttgaaattttttatttggcagtctttcaagtttgtccagctgactttcc----------tgtcttttccacgaagtagatgagccaaaacttca |
607 |
Q |
| |
|
||||||||||| ||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
4009550 |
tacatcttgaatttttttattcggcagtcttttaagtttgtccagctgactttcccattcttccttgtcttttccacgaagtagatgagccaaaacttca |
4009649 |
T |
|
| Q |
608 |
agaactaatggaattcctttggcataatcgaccaccttctttgatagatcatagtactccatttcaagatgactttgtttaaaggcattcaaattgaaaa |
707 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4009650 |
agaactaatggaattcctttggcataatcgaccactttctttgatagatcatagtactccatttcaagatgactttgtttaaaggcattcaaattgaaaa |
4009749 |
T |
|
| Q |
708 |
gctcaagtgcttcactagagtccaataccccaacctgatatagatcatcatcttcaacttcattagcaataagtacttgcttatctctagttgttaaaat |
807 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4009750 |
gctcaagtgcttcactagaatccaataccccaacctgatatagatcatcatcttcaacttcattagcaataagtacttgcttatctctagttgttaaaat |
4009849 |
T |
|
| Q |
808 |
tattctactatcagatcgaaaccaatcaagagttccaaataacatctctagctgactttcttccttaacatcatcaagaacaataagaaccttcatacga |
907 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4009850 |
tattctactatcggatcgaaaccaatcaagagttctaaataacatctctagctgaccttcttccttaacatcatcaagaacaataagaaccttcatacga |
4009949 |
T |
|
| Q |
908 |
ccaatccttctcacagtataat |
929 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
4009950 |
ccaatccttctcacagtataat |
4009971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 602; E-Value: 0
Query Start/End: Original strand, 18 - 879
Target Start/End: Complemental strand, 3956558 - 3955693
Alignment:
| Q |
18 |
caggttggtcatcttagcaaatacatgagggcttaacttcagcttcctgattgctgacaagtctacacgtatgcttctaatagcatcagtgccctgccat |
117 |
Q |
| |
|
|||||||||||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||| || ||||||||||||||||||||| ||||| ||| |
|
|
| T |
3956558 |
caggttggtcatcttatcaaatacattggggcttaacttcagtttcctacttgctgacaagtctagacttatgcttctaatagcatcagtaccctgtcat |
3956459 |
T |
|
| Q |
118 |
tgatgtaaaagaaaatcaaaatattttttaccaaaattacaaatgttatctaaaatcgccaaatatattataccttgtcgtttttcaatacatcatagat |
217 |
Q |
| |
|
| |||||||||||||||||||||||||| |||| || |||||||||||||||||| ||||||||| || ||||||||| |||||||||||||||||||| |
|
|
| T |
3956458 |
taatgtaaaagaaaatcaaaatatttttcaccagaaagacaaatgttatctaaaattgccaaatattttttaccttgtcatttttcaatacatcatagat |
3956359 |
T |
|
| Q |
218 |
aatatcaggatcccataatcgactgcattttctagggtcttcactagattcttgacgaacaacctcccgacccatttcttgtagaatgtcatgcatagat |
317 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
3956358 |
aatatcaggattggataatcgactgcattttctagggtcttcactggattcttggcgaacaacctcccgacccatttcttgtagaatgtcatgcatggat |
3956259 |
T |
|
| Q |
318 |
ataacattatcttcagaaatagttataagagatttatcttttaacctttctaacccaatagccactgcattatcactttcaaaatctttcagtaaaagtt |
417 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
3956258 |
ataacattatcttcagaaattgttataagagatttatctttcaacctttctaaaccaacagccactgcattatcactttcaaaatctttcaataaaagtt |
3956159 |
T |
|
| Q |
418 |
tcatgtaatccactttcaacctcaaccctttgaagaaacatgcaatatctaaaaaatacttttgctctaaacgatcaagatcatcataactgagcctcat |
517 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3956158 |
tcatgtaatccactttcaacctcaacccgttgaagaaacatgcaatatctaaaaaatacttttgctctaaacgatcaagatcatcataactgagcctcat |
3956059 |
T |
|
| Q |
518 |
tacatcttgaaattttttatttggcagtctttcaagtttgtccagctgactttcc----------tgtcttttccacgaagtagatgagccaaaacttca |
607 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||| | |
|
|
| T |
3956058 |
tacatcttgaaattttttatttggcagtcttttaagtttgtccagctgactttcccattcttccttgtcttttccacgaagcagatgagccaaaacttta |
3955959 |
T |
|
| Q |
608 |
agaactaatggaattcctttggcataatcgaccaccttctttgatagatcatagtactccatttcaagatgactttgtttaaaggcattcaaattgaaaa |
707 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
3955958 |
agaactaatggaattcctttggcataatcgatcaccttctttgaaagctcatagtactccatttcaagatgactttgattaaaggcattcaaattgaaaa |
3955859 |
T |
|
| Q |
708 |
gctcaagtgcttcactagagtccaataccccaacctgatatagatcatcatcttcaacttcattagcaataagtacttgcttatctctagttgttaaaat |
807 |
Q |
| |
|
||||||||||||| ||| | | || ||||||||| | ||||| |||| ||||||||||||| ||||||||||||||| |||||| |||||| ||| |
|
|
| T |
3955858 |
gctcaagtgcttcgctataattcagtaccccaacttcatatatatca------tcaacttcattagtaataagtacttgcttgtctctaattgttacaat |
3955765 |
T |
|
| Q |
808 |
tattctactatcagatcgaaaccaatcaagagttccaaataacatctctagctgactttcttccttaacatc |
879 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||| |
|
|
| T |
3955764 |
tattctactatcagatcgaaaccaatcaagagttccaaataaaatctctagttgattttcttccttaacatc |
3955693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 548; E-Value: 0
Query Start/End: Original strand, 21 - 918
Target Start/End: Original strand, 3800631 - 3801550
Alignment:
| Q |
21 |
gttggtcatcttagcaaatacatgagggcttaacttcagcttcctgattgctgacaagtctacacgtatgcttctaatagcatcagtgccctgccattga |
120 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||| |||| ||||| | |
|
|
| T |
3800631 |
gttggtcatcttagcaaatacatgagggcttaacttcagcttcctaaatgatgacaagtctacacgtatgcttctaatagcatcagtaccctaccattaa |
3800730 |
T |
|
| Q |
121 |
tgtaaaagaaaa-----------tcaaa---atattttttaccaaaattacaaatgttatctaaaatcgccaaatatattataccttgtcgtttttcaat |
206 |
Q |
| |
|
||||||||||| | ||| |||||||| |||||||| ||| ||||||||| |||| ||||||||| || ||||||||| ||||||||| |
|
|
| T |
3800731 |
cgtaaaagaaaaatttcaatcattgaaagccatatttttaaccaaaataacatatgttatctgaaatagccaaatattttttaccttgtcatttttcaat |
3800830 |
T |
|
| Q |
207 |
acatcatagataatatcaggatcccataatcgactgcattttctagggtcttcactagattcttgacgaacaacctcccgacccatttcttgtagaatgt |
306 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||| |
|
|
| T |
3800831 |
acatcatagataatatcaggatcccataaatgactgcattttctagggtcttcactatattcttggcgaacaacctcccgacccatttctcatagaatgt |
3800930 |
T |
|
| Q |
307 |
catgcatagatataacattatcttcagaaatagttataagagatttatcttttaacctttctaacccaatagccactgcattatcactttcaaaatcttt |
406 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||| |
|
|
| T |
3800931 |
catgcatagatataacattatcg--agaaatagttataagagctttatcttttaacctttctaacccaacagccactgaattatcactttcacaatcttt |
3801028 |
T |
|
| Q |
407 |
cagtaaaagtttcatgtaatccactttcaacctcaaccctttgaagaaacatgcaatatctaaaaaatacttttgctctaaacgatcaagatcatcataa |
506 |
Q |
| |
|
|||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
3801029 |
cagtaaaattttcatgtaatccactttcaaattcaacccattgaagaaacatgcaatatctaaaaaatactttttctctaaatgatcaagatcatcataa |
3801128 |
T |
|
| Q |
507 |
ctgagcctcattacatcttgaaattttttatttggcagtctttcaagtttgtccagctgactttcc----------tgtcttttccacgaagtagatgag |
596 |
Q |
| |
|
||||| ||||||||||| |||| || || | |||||||||||| ||||||||| ||| |||||||| | |||||||||||| | ||||| |
|
|
| T |
3801129 |
ctgagtctcattacatcatgaacttcttgaattggcagtcttttaagtttgtctagcagactttcccatacttctttacattttccacgaagcatatgag |
3801228 |
T |
|
| Q |
597 |
ccaaaacttcaagaactaatggaattcctttggcataatcgaccaccttctttgatagatcatagtactccatttcaagatgactttgtttaaaggcatt |
696 |
Q |
| |
|
||||||||| |||||||||||||| |||||||||||| |||| |||| |||||||||| |||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
3801229 |
ccaaaactttaagaactaatggaactcctttggcatattcgatcaccctctttgatagctcatagtactccatttcaggatgactttgtttaaaggcatt |
3801328 |
T |
|
| Q |
697 |
caaattgaaaagctcaagtgcttcactagagtccaataccccaacctgatatagatcatcatcttcaacttcattagcaataagtacttgcttatctcta |
796 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| || | |||||||||| |||||||||||||||||||||| |
|
|
| T |
3801329 |
caaattgaaaagctcaagtgcttcactagaatccaataccccaacctcatatagatcatcgtcatacacttcattaggaataagtacttgcttatctcta |
3801428 |
T |
|
| Q |
797 |
gttgttaaaattattctactatcagatcgaaaccaatcaagagttccaaataacatctctagctgactttcttccttaacatcatcaagaacaataagaa |
896 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||| ||||||||| |
|
|
| T |
3801429 |
cttgttacaattattctactatcagattgaaaccaatcaagagttccaaataacatctctagcagaccttcttccttaatatcatcaagatcaataagaa |
3801528 |
T |
|
| Q |
897 |
ccttcatacgaccaatccttct |
918 |
Q |
| |
|
|||||||||| ||||||||||| |
|
|
| T |
3801529 |
ccttcatacggccaatccttct |
3801550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 464; E-Value: 0
Query Start/End: Original strand, 19 - 903
Target Start/End: Complemental strand, 3920817 - 3919919
Alignment:
| Q |
19 |
aggttggtcatcttagcaaatacatgagggcttaacttcagcttcctgattgctgacaagtctacacgtatgcttctaatagcatcagtgccctgccatt |
118 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| |||||||| || || | |||| ||||||||||||||| |||||||||| |||||||||| |
|
|
| T |
3920817 |
aggttggtcatcttatcaaatacatgagggcttaactttagcttcctattttctaagaagtttacacgtatgcttctgatagcatcagaaccctgccatt |
3920718 |
T |
|
| Q |
119 |
gatgtaaaagaaaatcaaaatat----tttttaccaaaattacaaatgttatctaaaatcgccaaatatattataccttgtcgtttttcaatacatcata |
214 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||| || | |||||||| ||| |||| ||| | ||||||||| ||||||||||||||| | |
|
|
| T |
3920717 |
aatgtaaaagaaaatcaaaatatatactttttaccaaaatgactattgttatctgaaaatgccatataatgtttaccttgtcatttttcaatacatcaca |
3920618 |
T |
|
| Q |
215 |
gataatatcaggatcccataatcgactgcattttctagggtcttcactagattcttgacgaacaacctcccgacccatttcttgtagaatgtcatgcata |
314 |
Q |
| |
|
|| |||| ||||||||||||||||| |||| ||||| ||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
3920617 |
aatgtcatcaacatcccataatcgactgcgtttttcagggtgttctctagattcttggcgaactacctcccgacccatttcttgtagaatgtcatgcata |
3920518 |
T |
|
| Q |
315 |
gatataacattatcttcagaaatagttataagagatttatcttttaacctttctaacccaatagccactgcattatcactttcaaaatctttcagtaaaa |
414 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||| |||||| ||||||||| ||| ||||||||| |||| |
|
|
| T |
3920517 |
gatataacattatcttcagaaatagttataagagctttatctttcaagctttctaacccaccagccacgtaattatcactatcacaatctttcaataaat |
3920418 |
T |
|
| Q |
415 |
gtttcatgtaatccactttcaacctcaaccctttgaagaaacatgcaatatctaaaaaatacttttgctctaaacgatcaagatcatcataactgagcct |
514 |
Q |
| |
|
|||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |
|
|
| T |
3920417 |
gtttcatgtaatccactttcaaattcaacccattgaagaaacatgcaatatctaaaaaatactttttctctaaacgatcaagatcatcataactgagttt |
3920318 |
T |
|
| Q |
515 |
cattacatcttgaaattttttatttggcagtctttcaagtttgtccagctgactttcc----------tgtcttttccacgaagtagatgagccaaaact |
604 |
Q |
| |
|
|| |||||| |||| ||||| | ||||||||||| ||||||||| |||||||||||| ||| |||||||||||| | ||||||||||||| |
|
|
| T |
3920317 |
cactacatcatgaactttttgaactggcagtcttttaagtttgtctagctgactttcccatacttctttgttttttccacgaagcatatgagccaaaact |
3920218 |
T |
|
| Q |
605 |
tcaagaactaatggaattcctttggcataatcgaccaccttctttgatagatcatagtactccatttcaagatgactttgtttaaaggcattcaaattga |
704 |
Q |
| |
|
| |||||||||||||| |||||||||||| |||| |||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
3920217 |
ttaagaactaatggaactcctttggcatattcgatcaccctctttgatagctcatagtactccatttcaggatgactttgtttaaaggcattcaaattga |
3920118 |
T |
|
| Q |
705 |
aaagctcaagtgcttcactagagtccaataccccaacctgatatagatcatcatcttcaacttcattagcaataagtacttgcttatctctagttgttaa |
804 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| ||||| ||||||| |||||| ||||||||||||| | ||||||||||||||||| | ||||| |
|
|
| T |
3920117 |
aaagctcaagtgcttcactagaatccaataccctaacctcatatagaccatcatgatcaacttcattagtccttagtacttgcttatctctggatgttag |
3920018 |
T |
|
| Q |
805 |
aattattctactatcagatcgaaaccaatcaagagttccaaataacatctctagctga-ctttcttccttaacatcatcaagaacaataagaaccttcat |
903 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || || ||||| |||||||||||||| |||||||||||||| |
|
|
| T |
3920017 |
aattattctactatcagattgaaaccaatcaagagttccaaataacatctcgagctgatctgtc-tccttgacatcatcaagaacgataagaaccttcat |
3919919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 437; E-Value: 0
Query Start/End: Original strand, 19 - 903
Target Start/End: Complemental strand, 3934038 - 3933143
Alignment:
| Q |
19 |
aggttggtcatcttagcaaatacatgagggcttaacttcagcttcctgattgctgacaagtctacacgtatgcttctaatagcatcagtgccctgccatt |
118 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| |||||||| || || | |||||||||||||||||||| |||||||||| |||||||||| |
|
|
| T |
3934038 |
aggttggtcatcttatcaaatacatgagggcttaactttagcttcctattttctaagaagtctacacgtatgcttctgatagcatcagaaccctgccatt |
3933939 |
T |
|
| Q |
119 |
gatgtaaaagaaaatcaaaatat----tttttaccaaaattacaaatgttatctaaaatcgccaaatatattataccttgtcgtttttcaatacatcata |
214 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||| || | |||||||| ||| |||| ||| | ||||||||| ||||||||||||||| | |
|
|
| T |
3933938 |
aatgtaaaagaaaatcaaaatatatactttttaccaaaatgactattgttatctgaaaatgccatataatgtttaccttgtcatttttcaatacatcaaa |
3933839 |
T |
|
| Q |
215 |
gataatatcaggatcccataatcgactgcattttctagggtcttcactagattcttgacgaacaacctcccgacccatttcttgtagaatgtcatgcata |
314 |
Q |
| |
|
|| |||| ||||||||||||||||||||||| | |||| |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||| |
|
|
| T |
3933838 |
aatgtcatcaacatcccataatcgactgcattttccaaggtc---actagattcttgccgaacaacctcccaacccatttcttgaagaatgtcatgcata |
3933742 |
T |
|
| Q |
315 |
gatataacattatcttcagaaatagttataagagatttatcttttaacctttctaacccaatagccactgcattatcactttcaaaatctttcagtaaaa |
414 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||| |||||| ||||||||| ||| ||||||||| |||| |
|
|
| T |
3933741 |
gatataacattatcttcagaaatagttataagagctttatctttcaacgtttctaacccaccagccacgtaattatcactatcacaatctttcaataaat |
3933642 |
T |
|
| Q |
415 |
gtttcatgtaatccactttcaacctcaaccctttgaagaaacatgcaatatctaaaaaatacttttgctctaaacgatcaagatcatcataactgagcct |
514 |
Q |
| |
|
||||||||||||||| || ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
3933641 |
gtttcatgtaatccaattccaaatccaacccattgaagaaacatgcaatatctaaaaaatacttttgctctaaacgatcaagatcatcataactaagcct |
3933542 |
T |
|
| Q |
515 |
cattacatcttgaaattttttatttggcagtctttcaagtttgtccagctgactttcc----------tgtcttttccacgaagtagatgagccaaaact |
604 |
Q |
| |
|
||||||||| |||| |||| | |||||||||||| ||||||||| |||| ||||||| | |||||||||||| | ||||||||||||| |
|
|
| T |
3933541 |
cattacatcatgaacttttggaattggcagtcttttaagtttgtctagcttactttcccatacttctttacattttccacgaagcatatgagccaaaact |
3933442 |
T |
|
| Q |
605 |
tcaagaactaatggaattcctttggcataatcgaccaccttctttgatagatcatagtactccatttcaagatgactttgtttaaaggcattcaaattga |
704 |
Q |
| |
|
| |||||||||||||| |||||||||||| |||| |||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3933441 |
ttaagaactaatggaactcctttggcatattcgatcaccctctctgatagctcatagtactccatttcaagatgactttgtttaaaggcattcaaattga |
3933342 |
T |
|
| Q |
705 |
aaagctcaagtgcttcactagagtccaataccccaacctgatatagatcatcatcttcaacttcattagcaataagtacttgcttatctctagttgttaa |
804 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| ||||| | |||||||||||| ||||||||||| | || ||| |||||||||| |||| | |||| |
|
|
| T |
3933341 |
aaagctcaagtgcttcactagaatccaataccctaacctcacatagatcatcattatcaacttcattggtaacaagcacttgcttatttctactggttac |
3933242 |
T |
|
| Q |
805 |
aattattctactatcagatcgaaaccaatcaagagttccaaataacatctctagctgactttcttccttaacatcatcaagaacaataagaaccttcat |
903 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| ||||||||||||||||||| || | ||| || ||||||||||||||||||||||| ||||| |
|
|
| T |
3933241 |
aattattctactatctaatcgaaaccaatcaagagatccaaataacatctctagcagatctgtttcattgacatcatcaagaacaataagaactttcat |
3933143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 430; E-Value: 0
Query Start/End: Original strand, 17 - 912
Target Start/End: Original strand, 3986036 - 3986953
Alignment:
| Q |
17 |
tcaggttggtcatcttagcaaatacatgagggcttaacttcagcttcctgattgctgacaagtctacacgtatgcttctaatagcatcagtgccctgcca |
116 |
Q |
| |
|
||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| || || ||||||||||||||||||||| ||||| || |
|
|
| T |
3986036 |
tcaggttcgtcatcttagcaaatacatcagggcttaacttcagcttcctaattgctgacaagtttagacatatgcttctaatagcatcagtaccctgtca |
3986135 |
T |
|
| Q |
117 |
ttgatgtaaaagaaaat-caaaat-------------attttttaccaaaattacaaatgttatctaaaatcgccaaatatattataccttgtcgttttt |
202 |
Q |
| |
|
| ||| |||||||||| | |||| ||||| |||||||| ||||||||||| |||| || | ||| |||||||||||| ||||| |
|
|
| T |
3986136 |
tgaatggaaaagaaaattctaaatcattgaaagacacattttaaaccaaaataacaaatgttatgtaaagatgcta--tattttataccttgtcattttt |
3986233 |
T |
|
| Q |
203 |
caatacatcatagataatatcaggatcccataatcgactgcattttctagggtcttcactagattcttgacgaacaacctcccgacccatttcttgtaga |
302 |
Q |
| |
|
|| ||||| | || |||| |||||||||||||||||| ||| | |||| ||||||||||||||| |||||||||||||||||||||||||| ||| |
|
|
| T |
3986234 |
taagacatcgcaaatttcatcatgatcccataatcgactgcgtttgtttgggtattcactagattcttggcgaacaacctcccgacccatttcttgaaga |
3986333 |
T |
|
| Q |
303 |
atgtcatgcatagatataacattatcttcagaaatagttataagagatttatcttttaacctttctaacccaatagccactgcattatcactttcaaaat |
402 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||| ||||| |||||||| |||||||| |||| ||| |
|
|
| T |
3986334 |
atgtcatgcatagatataacattatcttcagaaatagttatgagagctttatctttcaacctttctatcccaacagccactgaattatcaccttcacaat |
3986433 |
T |
|
| Q |
403 |
ctttcagtaaaagtttcatgtaatccactttcaacctcaaccctttgaagaaacatgcaatatctaaaaaatacttttgctctaaacgatcaagatcatc |
502 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
3986434 |
ctttcaataaaagtttcatgtaatccactttcaaactcaacccattgaagaaacatgcaatatctaaaaaatactttttctctaaacgatcaagatcatc |
3986533 |
T |
|
| Q |
503 |
ataactgagcctcattacatcttgaaattttttatttggcagtctttcaagtttgtccagctgactttcc----------tgtcttttccacgaagtaga |
592 |
Q |
| |
|
|||||||| ||| |||||| |||| ||||||| ||||||||||| ||||||||| |||||||||||| ||| |||||||||||| | | |
|
|
| T |
3986534 |
gtaactgagtttcactacatcatgaacttttttaactggcagtcttttaagtttgtctagctgactttcccatacttctttgttttttccacgaagcata |
3986633 |
T |
|
| Q |
593 |
tgagccaaaacttcaagaactaatggaattcctttggcataatcgaccaccttctttgatagatcatagtactccatttcaagatgactttgtttaaagg |
692 |
Q |
| |
|
||||||||||||| ||||||||||||| ||||||||||||||| ||||||| ||||||||| |||| |||| |||||||||||||||||||||||| |
|
|
| T |
3986634 |
tgagccaaaactttaagaactaatggatttcctttggcataattgaccaccctctttgatatttcatcaaactcagtttcaagatgactttgtttaaagg |
3986733 |
T |
|
| Q |
693 |
cattcaaattgaaaagctcaagtgcttcactagagtccaataccccaacctgatatagatcatcatcttcaacttcattagcaataagtacttgcttatc |
792 |
Q |
| |
|
|||||||||||||||| ||||||| |||||||| |||||||||||||||| |||| |||||||||| |||||||||||| ||| ||||||||||||||| |
|
|
| T |
3986734 |
cattcaaattgaaaagtgcaagtgcatcactagaatccaataccccaacctcatatcgatcatcatcgtcaacttcattatcaaaaagtacttgcttatc |
3986833 |
T |
|
| Q |
793 |
tctagttgttaaaattattctactatcagatcgaaaccaatcaagagttccaaataacatctctagctgactttcttccttaacatcatcaagaacaata |
892 |
Q |
| |
|
||| | ||||| ||||||||||||||| ||| ||||||| ||||||||| | |||||||||||||||||| ||| ||||||||||||||||||| ||| |
|
|
| T |
3986834 |
tctggctgttagaattattctactatctgattgaaaccagtcaagagtttcgaataacatctctagctgatcttcgtccttaacatcatcaagaatgata |
3986933 |
T |
|
| Q |
893 |
agaaccttcatacgaccaat |
912 |
Q |
| |
|
||||||||||| || ||||| |
|
|
| T |
3986934 |
agaaccttcatgcgtccaat |
3986953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 427; E-Value: 0
Query Start/End: Original strand, 18 - 928
Target Start/End: Original strand, 4024273 - 4025200
Alignment:
| Q |
18 |
caggttggtcatcttagcaaatacatgagggcttaacttcagcttcctgattgctgacaagtctacacgtatgcttctaatagcatcagtgccctgccat |
117 |
Q |
| |
|
|||||||||||||||||||||| |||||| ||||||| ||||||| || || ||||||||||||||| ||||||||||||| ||||||| ||||| ||| |
|
|
| T |
4024273 |
caggttggtcatcttagcaaatgcatgagagcttaacatcagctttcttcttcctgacaagtctacacttatgcttctaataacatcagtaccctg-cat |
4024371 |
T |
|
| Q |
118 |
tgatgtaaaagaaaa--tcaaaat-------------attttttaccaaaattacaaatgttatctaaaatcgccaaatatattataccttgtcgttttt |
202 |
Q |
| |
|
|||||| |||||| | ||||| |||||| ||||||| ||||| || ||||||| | | ||| || ||||||||| |||| |
|
|
| T |
4024372 |
gaatgtaagagaaaaatttaaaattagttaaagccgtatttttagccaaaatgacaaacgtcgtctaaaaatacgtattatgtt-taccttgtcattttc |
4024470 |
T |
|
| Q |
203 |
caatacatcatagataatatcaggatcccataatcgactgcattttctagggtcttcactagattcttgacgaacaacctcccgacccatttcttgtaga |
302 |
Q |
| |
|
|||||||||| | || |||| |||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
4024471 |
caatacatcacaaatgtcatcatgatcccataatcgactgcgttttctagggtctgcactagattcttggcgaacaacctcccgacccatttcttgtaga |
4024570 |
T |
|
| Q |
303 |
atgtcatgcatagatataacattatcttcagaaatagttataagagatttatcttttaacctttctaacccaatagccactgcattatcactttcaaaat |
402 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||| ||||||| | ||||||||||| |||| |||||||| |||||| |||||| ||| |
|
|
| T |
4024571 |
atgtcatgcatagatataatattatcttcagaaatagttataagagctttatctctcaacctttctaaaccaacagccactgaattatcgctttcacaat |
4024670 |
T |
|
| Q |
403 |
ctttcagtaaaagtttcatgtaatccactttcaacctcaaccctttgaagaaacatgcaatatctaaaaaatacttttgctctaaacgatcaagatcatc |
502 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
4024671 |
ctttcaataaaagtttcatgtaatccactttcaaattcaacccgttgaagaaacatgcaatatctaaaaaatactttttctctaaacgatcaagatcatc |
4024770 |
T |
|
| Q |
503 |
ataactgagcctcattacatcttgaaattttttatttggcagtctttcaagtttgtccagctgactttcc----------tgtcttttccacgaagtaga |
592 |
Q |
| |
|
|||||| || ||||||||||| |||| ||||| | ||||||||||| ||||||||| |||||||||||| | | |||||||||||| | | |
|
|
| T |
4024771 |
ataacttagtctcattacatcatgaactttttgaactggcagtcttttaagtttgtctagctgactttcccatacttctttattttttccacgaagcata |
4024870 |
T |
|
| Q |
593 |
tgagccaaaacttcaagaactaatggaattcctttggcataatcgaccaccttctttgatagatcatagtactccatttcaagatgactttgtttaaagg |
692 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||| || |||||||||||| ||||||||| | |
|
|
| T |
4024871 |
tgagccaaaactttaagaactaatggaattcctttggcataatcgatcaccttctttgatagctcaaagtacaccgtttcaagatgacgttgtttaaatg |
4024970 |
T |
|
| Q |
693 |
cattcaaattgaaaagctcaagtgcttcactagagtccaataccccaacctgatatagatcatcatcttcaacttcattagcaataagtacttgcttatc |
792 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||| ||| |||||||||||| ||||||||||||| | || |
|
|
| T |
4024971 |
cattcaagttgaaaagctcaagtgcttcactagaatccaataccccaacctcatata------catgatcaacttcattacaaataagtacttgcatgtc |
4025064 |
T |
|
| Q |
793 |
tctagttgttaaaattattctactatcagatcgaaaccaatcaagagttccaaataacatctctagctgactttcttccttaacatcatcaagaacaata |
892 |
Q |
| |
|
||||||||| | |||||| |||||||||||| ||| ||||||||| ||||||||||||||||||| ||||| |||||||||||| ||||||||||||||| |
|
|
| T |
4025065 |
tctagttgtgacaattatcctactatcagatagaagccaatcaagtgttccaaataacatctctatctgaccttcttccttaacgtcatcaagaacaata |
4025164 |
T |
|
| Q |
893 |
agaaccttcatacgaccaatccttctcacagtataa |
928 |
Q |
| |
|
|| ||||||||||| |||||||||||| || ||||| |
|
|
| T |
4025165 |
aggaccttcatacggccaatccttctctcaatataa |
4025200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 399; E-Value: 0
Query Start/End: Original strand, 18 - 913
Target Start/End: Original strand, 4001334 - 4002258
Alignment:
| Q |
18 |
caggttggtcatcttagcaaatacatgagggcttaacttcagcttcctgattgctgacaagtctacacgtatgcttctaatagcatcagtgccctgccat |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
4001334 |
caggttggtcatcttagcaaatacatgagggcttaacttcagcttcctaaatgatgacaagtctacacgtatgcttctaatagcatcagtaccctaccat |
4001433 |
T |
|
| Q |
118 |
tgatgtaaaag-aaaat--caaa------------atattttttaccaaaattacaaatgtta----------tctaaaatcgccaa-atatattatacc |
191 |
Q |
| |
|
| ||||||||| ||||| |||| |||||||| |||||||| ||| ||||| ||||||| ||||| |||| || |||| |
|
|
| T |
4001434 |
taatgtaaaagaaaaattacaaatcattgaaagccatatttttaaccaaaatgacatatgtttctaaaaagtttctaaaaacgccattatattttttacc |
4001533 |
T |
|
| Q |
192 |
ttgtcgtttttcaatacatcatagataatatcaggatcccataatcgactgcattttctagggtcttcactagattcttgacgaacaacctcccgaccca |
291 |
Q |
| |
|
||||| ||||||||||||| | || ||||||||||||||| ||||| | ||| ||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
4001534 |
ttgtcatttttcaatacatagcaaatgtcatcaggatcccataaccgacttcgtttactagggtcttcactagattcttggcgaacaacctcccgaccca |
4001633 |
T |
|
| Q |
292 |
tttcttgtagaatgtcatgcatagatataacattatcttcagaaatagttataagagatttatcttttaacctttctaacccaatagccactgcattatc |
391 |
Q |
| |
|
||||||||| ||||||||||||||||| |||||||| || |||||||||||||||| ||||||||| ||||||||||| |||| | |||||| ||| || |
|
|
| T |
4001634 |
tttcttgtaaaatgtcatgcatagatacaacattatatttcgaaatagttataagagctttatctttcaacctttctaaaccaacaaccactgaattgtc |
4001733 |
T |
|
| Q |
392 |
actttcaaaatctttcagtaaaagtttcatgtaatccactttcaacctcaaccctttgaagaaacatgcaatatctaaaaaatacttttgctctaaacga |
491 |
Q |
| |
|
||||||| |||| | || | |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4001734 |
actttcagtctctt--aatagatgtttcatgtaatccactttcaaattcaacccgttgaagaaacatgcaatatctaaaaaatacttttgctctaaacga |
4001831 |
T |
|
| Q |
492 |
tcaagatcatcataactgagcctcattacatcttgaaattttttatttggcagtctttcaagtttgtccagctgactttcctgt----------cttttc |
581 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| | || ||||||| |||| ||| ||| |||||| || |||||||||||| | |||||| |
|
|
| T |
4001832 |
tcaagatcatcataactgagtctcattacatcataaacttttttacttggaagttttttaagtttatcaagctgactttcccatacttccttaacttttc |
4001931 |
T |
|
| Q |
582 |
cacgaagtagatgagccaaaacttcaagaactaatggaattcctttggcataatcgaccaccttctttgatagatcatagtactccatttcaagatgact |
681 |
Q |
| |
|
||||||||| |||||||||||||| || | |||||||||||||||| ||||| | |||||| |||||||||| |||||||||||||||||||||||||| |
|
|
| T |
4001932 |
cacgaagtaaatgagccaaaactttaacacctaatggaattccttttgcatacgcaaccaccctctttgatagctcatagtactccatttcaagatgact |
4002031 |
T |
|
| Q |
682 |
ttgtttaaaggcattcaaattgaaaagctcaagtgcttcactagagtccaataccccaacctgatatagatcatcatcttcaacttcattagcaataagt |
781 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| ||||||| | ||| |||||||| | ||||| |||| ||||||||||||| ||||||| |
|
|
| T |
4002032 |
ttgtttaaaggcattcaaatgaaaaagctcaagtgcctcactaggtttcaacaccccaacttcatatatatcaa-----tcaacttcattagtaataagt |
4002126 |
T |
|
| Q |
782 |
acttgcttatctctagttgttaaaattattctactatcagatcgaaaccaatcaagagttccaaataacatctctagctgactttcttccttaacatcat |
881 |
Q |
| |
|
|||||||| |||||||| |||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |
|
|
| T |
4002127 |
acttgcttgtctctagtcgttacaattatcctactatcggatcgaaaccaatcaagagttccaaataacatctctatttgaccttcttccttaacatcat |
4002226 |
T |
|
| Q |
882 |
caagaacaataagaaccttcatacgaccaatc |
913 |
Q |
| |
|
||||||||||||||||||||||||| |||||| |
|
|
| T |
4002227 |
caagaacaataagaaccttcatacggccaatc |
4002258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 378; E-Value: 0
Query Start/End: Original strand, 188 - 903
Target Start/End: Original strand, 3816823 - 3817545
Alignment:
| Q |
188 |
taccttgtcgtttttcaatacatcatagataatatcaggatcccataatcgactgcattttctagggtcttcactagattcttgacgaacaacctcccga |
287 |
Q |
| |
|
||||||||| ||||||||||||||||| || |||||||| |||||||||||||| ||||| | |||| |||||||||||| ||||||| ||||| | |
|
|
| T |
3816823 |
taccttgtcatttttcaatacatcataaatttcatcaggattccataatcgactgcgttttccaaggtc---actagattcttgccgaacaatctcccaa |
3816919 |
T |
|
| Q |
288 |
cccatttcttgtagaatgtcatgcatagatataacattatcttcagaaatagttataagagatttatcttttaacctttctaacccaatagccactgcat |
387 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||| |||||| || |
|
|
| T |
3816920 |
cccatttcttgaagaatgtcatgcatagatataacattatcttcagaaatagttataagagctttatctttcaacgtttctaacccaccagccacgtaat |
3817019 |
T |
|
| Q |
388 |
tatcactttcaaaatctttcagtaaaagtttcatgtaatccactttcaacctcaaccctttgaagaaacatgcaatatctaaaaaatacttttgctctaa |
487 |
Q |
| |
|
||||||| ||| ||||||||| |||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3817020 |
tatcactatcacaatctttcaataaatgtttcatgtaatccactttcaaatccaacccattgaagaaacatgcaatatctaaaaaatacttttgctctaa |
3817119 |
T |
|
| Q |
488 |
acgatcaagatcatcataactgagcctcattacatcttgaaattttttatttggcagtctttcaagtttgtccagctgactttcc----------tgtct |
577 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |||| | || ||||| | |||||||||| ||||||||| |||||||||||| | | | |
|
|
| T |
3817120 |
acgatcaagatcatcataactgagtctcattgcatcataaactttttgaactggcagtcttctaagtttgtctagctgactttcccatacttctttcttt |
3817219 |
T |
|
| Q |
578 |
tttccacgaagtagatgagccaaaacttcaagaactaatggaattcctttggcataatcgaccaccttctttgatagatcatagtactccatttcaagat |
677 |
Q |
| |
|
||||||||||| | |||||| ||||| | ||||||||| ||||| ||||||||||||| |||||| |||||||||| |||||||||||||||||||||| |
|
|
| T |
3817220 |
tttccacgaagcatatgagctaaaaccttaagaactaacggaatccctttggcataattgaccacactctttgatagctcatagtactccatttcaagat |
3817319 |
T |
|
| Q |
678 |
gactttgtttaaaggcattcaaattgaaaagctcaagtgcttcactagagtccaataccccaacctgatatagatcatcatcttcaacttcattagcaat |
777 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||| | |
|
|
| T |
3817320 |
gactttgtttaaaggcattcgaattgaaaagcacaagtgcttcactagaatccaataccccaacctcatatatatcatcatcttcaacttcattattcct |
3817419 |
T |
|
| Q |
778 |
aagtacttgcttatctctagttgttaaaattattctactatcagatcgaaaccaatcaagagttccaaataacatctctagctga-ctttcttccttaac |
876 |
Q |
| |
|
||||||||||||||||| | ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || || ||||| || |
|
|
| T |
3817420 |
tagtacttgcttatctctggatgttagaattattctactatcagattgaaaccaatcaagagttccaaataacatctcgagctgatctgtc-tccttgac |
3817518 |
T |
|
| Q |
877 |
atcatcaagaacaataagaaccttcat |
903 |
Q |
| |
|
|||||||||||| |||||||||||||| |
|
|
| T |
3817519 |
atcatcaagaacgataagaaccttcat |
3817545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 188 - 914
Target Start/End: Original strand, 3809237 - 3809976
Alignment:
| Q |
188 |
taccttgtcgtttttcaatacatcatagataatatcaggatcccataatcgactgcattttctagggtcttcactagattcttgacgaacaacctcccga |
287 |
Q |
| |
|
||||||||| ||||||||||||||||| || |||||||| |||||||||||||| |||| ||||| ||| ||||||||||| ||||| ||||||||| |
|
|
| T |
3809237 |
taccttgtcatttttcaatacatcataaatttcatcaggattccataatcgactgcgtttttcagggtgttctctagattcttggcgaactacctcccga |
3809336 |
T |
|
| Q |
288 |
cccatttcttgtagaatgtcatgcatagatataacattatcttcagaaatagttataagagatttatcttttaacctttctaacccaatagccactgcat |
387 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||| || |||||||||||| |||||||| || |
|
|
| T |
3809337 |
cccatttcttgtagaatgtcatgcatagatataacattatattcagaaatagttataagagctttgtctttcaagctttctaacccagcagccactgaat |
3809436 |
T |
|
| Q |
388 |
tatcactttcaaaatctttcagtaaaagtttcatgtaatccactttcaacctcaaccctttgaagaaacatgcaatatctaaaaaatacttttgctctaa |
487 |
Q |
| |
|
||||||| | | ||||||||| ||||||| | |||||| ||||| |||| |||||||| |||||||||||||||||||||||||||||||| | |||||| |
|
|
| T |
3809437 |
tatcactgttagaatctttcaataaaagtgttatgtaacccactctcaaactcaacccattgaagaaacatgcaatatctaaaaaatacttcttctctaa |
3809536 |
T |
|
| Q |
488 |
acgatcaagatcatcataactgagcctcattacatcttgaaattttttatttggcagtctttcaagtttgtccagctgactttcc----------tgtct |
577 |
Q |
| |
|
| |||||||||||||||||||||| |||||||| | | || || || | |||||||||| ||||||||| |||||||||||| | | | |
|
|
| T |
3809537 |
aggatcaagatcatcataactgagtctcattactttatcaacttcttgaactggcagtcttctaagtttgtctagctgactttcccatacttctttattt |
3809636 |
T |
|
| Q |
578 |
tttccacgaagtagatgagccaaaacttcaagaactaatggaattcctttggcataatcgaccaccttctttgatagatcatagtac---tccatttcaa |
674 |
Q |
| |
|
||||||||||| | || ||||||||||| ||||||||||||||||||||||||||| ||| |||| ||||||||| |||| | || || | ||||| |
|
|
| T |
3809637 |
tttccacgaagcatattagccaaaactttaagaactaatggaattcctttggcatattcggtcaccctctttgatacatcacaaaactgatcaacttcaa |
3809736 |
T |
|
| Q |
675 |
gatgactttgtttaaaggcattcaaattgaaaagctcaagtgcttcactagagtccaataccccaacctgatatagatcatcatcttcaacttcattagc |
774 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||| | | |||||||| | |||||||||||||| |
|
|
| T |
3809737 |
gatcactttgtttaaaggcattcaaattgaaaagctcaagttcttcagtaggacccaataccccaacctcaaacagatcatctttatcaacttcattagc |
3809836 |
T |
|
| Q |
775 |
aataagtacttgcttatctctagttgttaaaattattctactatcagatcgaaaccaatcaagagttccaaataacatctctagctgactttcttcctta |
874 |
Q |
| |
|
||||||||||||||||||||| | |||||||||||||||||||||| || ||||||||||| | |||||||||| | || |||||| | |||| |
|
|
| T |
3809837 |
aataagtacttgcttatctctggctgttaaaattattctactatcatattgaaaccaatcacaacttccaaataatttttccagctgatctgtacccttg |
3809936 |
T |
|
| Q |
875 |
acatcatcaagaacaataagaaccttcatacgaccaatcc |
914 |
Q |
| |
|
|| ||||||||||| |||||||||||||| || ||||||| |
|
|
| T |
3809937 |
acgtcatcaagaacgataagaaccttcatgcggccaatcc |
3809976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 577 - 918
Target Start/End: Original strand, 4218266 - 4218607
Alignment:
| Q |
577 |
ttttccacgaagtagatgagccaaaacttcaagaactaatggaattcctttggcataatcgaccaccttctttgatagatcatagtactccatttcaaga |
676 |
Q |
| |
|
||||||||||| | |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |
|
|
| T |
4218266 |
ttttccacgaaacatatgacccaaaactttaagaactaatggaattcctttggcataatcgaccaccttctttgatagatcgtagtacttaatttcaaga |
4218365 |
T |
|
| Q |
677 |
tgactttgtttaaaggcattcaaattgaaaagctcaagtgcttcactagagtccaataccccaacctgatatagatcatcatcttcaacttcattagcaa |
776 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| ||||||| || ||||| | |||||||||||| | ||||| ||||||||| |||||||||||||||| |
|
|
| T |
4218366 |
tgactttctttaaaggcattcaaattgaaaagcgcaagtgcatcgctagaattcaataccccaacttcatatacatcatcatcatcaacttcattagcaa |
4218465 |
T |
|
| Q |
777 |
taagtacttgcttatctctagttgttaaaattattctactatcagatcgaaaccaatcaagagttccaaataacatctctagctgactttcttccttaac |
876 |
Q |
| |
|
||||||||||||||||||||| ||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |
|
|
| T |
4218466 |
taagtacttgcttatctctagatgttacaatgattctactatcggatcgaaaccaatcaagagttccaaataacatctctagcagaccttcttccttaat |
4218565 |
T |
|
| Q |
877 |
atcatcaagaacaataagaaccttcatacgaccaatccttct |
918 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
4218566 |
atcatcaagaacaataagaaccttcatacggtcaatccttct |
4218607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 221 - 520
Target Start/End: Original strand, 4217897 - 4218196
Alignment:
| Q |
221 |
atcaggatcccataatcgactgcattttctagggtcttcactagattcttgacgaacaacctcccgacccatttcttgtagaatgtcatgcatagatata |
320 |
Q |
| |
|
||||||||||||||| ||||| ||| |||||||||| | |||||||| | |||||||||||||||||||| | |||| ||| ||||||||||||||| |
|
|
| T |
4217897 |
atcaggatcccataaccgactttgtttactagggtctttaatagattctaggcgaacaacctcccgacccatcttttgttgaaagtcatgcatagatatt |
4217996 |
T |
|
| Q |
321 |
acattatcttcagaaatagttataagagatttatcttttaacctttctaacccaatagccactgcattatcactttcaaaatctttcagtaaaagtttca |
420 |
Q |
| |
|
|||||||||||||||||||| ||||||| ||||||||| |||||||||||||||| ||||||| ||||||||||||| ||||||||| ||||||||||| |
|
|
| T |
4217997 |
acattatcttcagaaatagtaataagagctttatctttcaacctttctaacccaacggccactgaattatcactttcataatctttcaataaaagtttca |
4218096 |
T |
|
| Q |
421 |
tgtaatccactttcaacctcaaccctttgaagaaacatgcaatatctaaaaaatacttttgctctaaacgatcaagatcatcataactgagcctcattac |
520 |
Q |
| |
|
|||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |
|
|
| T |
4218097 |
tgtaatccactttcaaattcaacccattgaagaaacatgcaatatctaaaaaatacttttgctctaagagatcaagatcatcataactgagtctcattac |
4218196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 157; E-Value: 6e-83
Query Start/End: Original strand, 227 - 716
Target Start/End: Original strand, 4017980 - 4018479
Alignment:
| Q |
227 |
atcccataatcgactgcattttctagggtcttcactagattcttgacgaacaacctcccgacccatttcttgtagaatgtcatgcatagatataacatta |
326 |
Q |
| |
|
||||||||| ||||| || ||| ||||||| || | |||||||| ||||||| |||| |||||||||||||| |||||||||||| |||||||||||| |
|
|
| T |
4017980 |
atcccataaccgactacagcttccagggtctccatttgattcttggcgaacaatttccctacccatttcttgtataatgtcatgcatggatataacatta |
4018079 |
T |
|
| Q |
327 |
tcttcagaaatagttataagagatttatcttttaacctttctaacccaatagccactgcattatcactttcaaaatctttcagtaaaagtttcatgtaat |
426 |
Q |
| |
|
|||| ||||| || ||||||| ||||||||| ||||||||||||||| | || |||| ||||||||||||| ||||||||| |||| ||| ||||| | |
|
|
| T |
4018080 |
tctttagaaaaagatataagacctttatctttcaacctttctaacccactggctactgaattatcactttcagaatctttcaacaaaaattttatgtagt |
4018179 |
T |
|
| Q |
427 |
ccactttcaacctcaaccctttgaagaaacatgcaatatctaaaaaatacttttgctctaaacgatcaagatcatcataactgagcctcattacatcttg |
526 |
Q |
| |
|
|||||||||| | | || ||||| |||||||||| |||| ||||| ||||| |||| ||||| |||||||||||||| | ||| |||||||||| |
|
|
| T |
4018180 |
ccactttcaaatttgatccattgaaaaaacatgcaagatctgaaaaaatctttttctctttgcgatccagatcatcataactcaatctcgttacatcttg |
4018279 |
T |
|
| Q |
527 |
aaattttttatttggcagtctttcaagtttgtccagctgactttcc----------tgtcttttccacgaagtagatgagccaaaacttcaagaactaat |
616 |
Q |
| |
|
|| ||||||| |||||| | ||| ||| ||||| || ||||||||| | |||||||| ||||| |||||||||||||||| |||||||||| |
|
|
| T |
4018280 |
aacttttttacttggcatttttttaagcttgtctagttgactttcccatactagcttatcttttccgcgaagaagatgagccaaaactttaagaactaat |
4018379 |
T |
|
| Q |
617 |
ggaattcctttggcataatcgaccaccttctttgatagatcatagtactccatttcaagatgactttgtttaaaggcattcaaattgaaaagctcaagtg |
716 |
Q |
| |
|
||||| ||||||||||||| ||||||| |||||| ||| ||||||||||| |||||||| | | ||| || ||||||||||||||||||||||||| |
|
|
| T |
4018380 |
ggaatgcctttggcataattgaccaccctctttgttagctcatagtactcaatttcaagttccttaactttgaaagcattcaaattgaaaagctcaagtg |
4018479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 142; E-Value: 5e-74
Query Start/End: Original strand, 188 - 716
Target Start/End: Complemental strand, 3964164 - 3963629
Alignment:
| Q |
188 |
taccttgtcgtttttcaatacatcatagataatatcaggatcccataatcgactgcattttctagggtcttcactagattcttgacgaacaacctcccga |
287 |
Q |
| |
|
||||||||| ||||| ||||| ||||| ||| ||| ||||||||||||||| | ||| ||||||| |||| |||||||| ||||||| ||||| | |
|
|
| T |
3964164 |
taccttgtcattttttaatacttcata---aatgtcatcatcccataatcgactacggcttccagggtctccacttgattcttggcgaacaatctcccta |
3964068 |
T |
|
| Q |
288 |
cccatttcttgtagaatgtcatgcatagatataacattatcttcagaaatagttataagagatttatcttttaacctttctaacccaatagccactgcat |
387 |
Q |
| |
|
||||| ||||||| ||| ||||||||||||||||||||| || ||||| || | |||| ||||||||| ||||||||||||||| | || |||| || |
|
|
| T |
3964067 |
cccatgtcttgtataattccatgcatagatataacattatgtttagaaacagaaacaagatctttatctttcaacctttctaacccactggctactgaat |
3963968 |
T |
|
| Q |
388 |
tatcactttcaaaatctttcagtaaaagtttcatgtaatccactttcaacctcaaccctttgaagaaacatgcaatatctaaaaaatacttttgctctaa |
487 |
Q |
| |
|
||||||||||| |||||||| || ||||| | ||| ||||||||||| || |||| ||||| ||||||||||||||||||||| |||||||||| |
|
|
| T |
3963967 |
tatcactttcagaatctttccacaatagttttaggtagtccactttcaaattcgacccattgaaaaaacatgcaatatctaaaaaaatcttttgctcttc |
3963868 |
T |
|
| Q |
488 |
acgatcaagatcatcataactgagcctcattacatcttgaaattttttatttggcagtctttcaagtttgtccagctgactttcc----------tgtct |
577 |
Q |
| |
|
||||| |||||||||||||| | |||||||||||||||| ||||||| |||||| | || ||| ||||| || ||||||||| | ||| |
|
|
| T |
3963867 |
gcgatctagatcatcataactcaatctcattacatcttgaacttttttacttggcatttttctaagcttgtctagttgactttcccatactagcttatct |
3963768 |
T |
|
| Q |
578 |
tttccacgaagtagatgagccaaaacttcaagaactaatggaattcctttggcataatcgaccaccttctttgatagatcatagtactccatttcaagat |
677 |
Q |
| |
|
||||| || | ||||| |||||||||| ||||||||||||||| ||||||||||||| |||||| |||||||||| |||| |||||| |||||||| | |
|
|
| T |
3963767 |
tttccgcggacaagatgcgccaaaactttaagaactaatggaatgcctttggcataattcaccaccctctttgatagctcattgtactcaatttcaagtt |
3963668 |
T |
|
| Q |
678 |
gactttgtttaaaggcattcaaattgaaaagctcaagtg |
716 |
Q |
| |
|
| ||| || ||||||||||||||||||||||||| |
|
|
| T |
3963667 |
ccttacctttgaaagcattcaaattgaaaagctcaagtg |
3963629 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 17 - 132
Target Start/End: Original strand, 4217667 - 4217782
Alignment:
| Q |
17 |
tcaggttggtcatcttagcaaatacatgagggcttaacttcagcttcctgattgctgacaagtctacacgtatgcttctaatagcatcagtgccctgcca |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||| | || |||||||| ||||||||||||||||||||||||||| |||| ||| |
|
|
| T |
4217667 |
tcaggttggtcatcttagcaaatacatgagggcttaacttcagcatccaaactgatgacaagtttacacgtatgcttctaatagcatcagtaccctacca |
4217766 |
T |
|
| Q |
117 |
ttgatgtaaaagaaaa |
132 |
Q |
| |
|
|| ||||||||||||| |
|
|
| T |
4217767 |
ttaatgtaaaagaaaa |
4217782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 874 - 919
Target Start/End: Complemental strand, 3954611 - 3954566
Alignment:
| Q |
874 |
aacatcatcaagaacaataagaaccttcatacgaccaatccttctc |
919 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
3954611 |
aacatcatcaagaacaataagaaccttcatacggccaatccttctc |
3954566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 3816641 - 3816694
Alignment:
| Q |
18 |
caggttggtcatcttagcaaa-tacatgagggcttaacttcagcttcctgattg |
70 |
Q |
| |
|
|||||||||||||||| |||| ||||||| ||||||||||||||| ||| |||| |
|
|
| T |
3816641 |
caggttggtcatcttatcaaaatacatgacggcttaacttcagctccctcattg |
3816694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 587; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 587; E-Value: 0
Query Start/End: Original strand, 17 - 919
Target Start/End: Original strand, 13397001 - 13397915
Alignment:
| Q |
17 |
tcaggttggtcatcttagcaaatacatgagggcttaacttcagcttcctgattgctgacaagtctacacgtatgcttctaatagcatcagtgccctgcca |
116 |
Q |
| |
|
||||||||||||||||| |||||||| | |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||| || |
|
|
| T |
13397001 |
tcaggttggtcatcttatcaaatacaggcgggcttaacttcagcttcctaattgctgacaagtctacacttatgcttctaatagcatcagtaccctgtca |
13397100 |
T |
|
| Q |
117 |
ttgatgtaaaagaaaatcaaaatattttttaccaaaattacaaatgttatctaaaatcgccaaatatattataccttgtcgtttttcaatacatcataga |
216 |
Q |
| |
|
|| | |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| | || ||||||||| |||||||||||||| |||| |
|
|
| T |
13397101 |
ttattataaaagaaaatcaaaatattttttaccaaaatgacaaatgttatctaaaattgccaaatttttt-taccttgtcatttttcaatacatcgtaga |
13397199 |
T |
|
| Q |
217 |
taatatcaggatcccataatcgactgcattttctagggtcttcactagattcttgacgaacaacctcccgacccatttcttgtagaatgtcatgcataga |
316 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
13397200 |
taatatcaggatcccataatcgactgcattttctagggtcttcactagattcttggcgaacaacctcgcgacccatttcctgtagaatgtcatgcataga |
13397299 |
T |
|
| Q |
317 |
tataacattatcttcagaaatagttataagagatttatcttttaacctttctaacccaatagccactgcattatcactttcaaaatctttcagtaaaagt |
416 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||| || | ||||||||||||| ||||||||| ||||||| |
|
|
| T |
13397300 |
tataacattatctttagaaatagttataagagctttatctttcaacctttctaacccaatagctacagaattatcactttcataatctttcaataaaagt |
13397399 |
T |
|
| Q |
417 |
ttcatgtaatccactttcaacctcaaccctttgaagaaacatgcaatatctaaaaaatacttttgctctaaacgatcaagatcatcataactgagcctca |
516 |
Q |
| |
|
|||||||| ||||||||||| |||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
13397400 |
ttcatgtactccactttcaaactcatcccgttgaagaaacatgcaatatctaaaaaatacttctgctctaaacgatcaagatcatcaaaactgagtctca |
13397499 |
T |
|
| Q |
517 |
ttacatcttgaaattttttatttggcagtctttcaagtttgtccagctgactttcc----------tgtcttttccacgaagtagatgagccaaaacttc |
606 |
Q |
| |
|
||||||| |||| ||||| | |||||||||||| ||||||||| |||||||||||| | | ||||||||||| | |||||||||||||| |
|
|
| T |
13397500 |
ttacatcatgaactttttgaattggcagtcttttaagtttgtctagctgactttcccatagttctttattctttccacgaagcatatgagccaaaacttt |
13397599 |
T |
|
| Q |
607 |
aagaactaatggaattcctttggcataatcgaccaccttctttgatagatcatagtactccatttcaagatgactttgtttaaaggcattcaaattgaaa |
706 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||| ||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13397600 |
aagaactaatgggattcctttggcataatcgaccaccctctttgatacatcataaaactcgttttcaagatgactttgtttaaaggcattcaaattgaaa |
13397699 |
T |
|
| Q |
707 |
agctcaagtgcttcactagagtccaataccccaacctgatata---gatcatcatcttcaacttcattagcaataagtacttgcttatctctagttgtta |
803 |
Q |
| |
|
||| |||||||||||||||| |||||||||| ||||| ||||| ||||||||| ||||||||||||||||||||||||||||||| || ||||||| |
|
|
| T |
13397700 |
agcgcaagtgcttcactagaatccaataccctaacctcatataaagcatcatcatcaacaacttcattagcaataagtacttgcttatccctggttgtta |
13397799 |
T |
|
| Q |
804 |
aaattattctactatcagatcgaaaccaatcaagagttccaaataacatctctagctgactttcttccttaacatcatcaagaacaataagaaccttcat |
903 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
13397800 |
taattattctactatcagatcgaaaccaatcaagagttccaaataacatctccagctgaccttcttccgtaacatcatcaagaacaataagaaccttcat |
13397899 |
T |
|
| Q |
904 |
acgaccaatccttctc |
919 |
Q |
| |
|
| | |||||||||||| |
|
|
| T |
13397900 |
atggccaatccttctc |
13397915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 7)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 367
Target Start/End: Original strand, 7074735 - 7074914
Alignment:
| Q |
188 |
taccttgtcgtttttcaatacatcatagataatatcaggatcccataatcgactgcattttctagggtcttcactagattcttgacgaacaacctcccga |
287 |
Q |
| |
|
||||||||| | ||||||||||| ||| || |||||||||| ||| ||| || | |||| ||| |||||| ||||||||| ||||||| ||||| | |
|
|
| T |
7074735 |
taccttgtcatctttcaatacatgataaatgtcatcaggatccaatagtcggcttcggtttccaggttcttcaacagattcttggcgaacaatctcccta |
7074834 |
T |
|
| Q |
288 |
cccatttcttgtagaatgtcatgcatagatataacattatcttcagaaatagttataagagatttatcttttaacctttc |
367 |
Q |
| |
|
| ||||||||| |||||||||||| |||| || | | || ||||||||||| ||||| ||||||||||| |||||| |
|
|
| T |
7074835 |
gctgtttcttgtataatgtcatgcattgatacaatgctttgttgagaaatagttacaagagctttatcttttagcctttc |
7074914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 781 - 908
Target Start/End: Original strand, 7081381 - 7081508
Alignment:
| Q |
781 |
tacttgcttatctctagttgttaaaattattctactatcagatcgaaaccaatcaagagttccaaataacatctctagctgactttcttccttaacatca |
880 |
Q |
| |
|
||||||||||||| ||||||||| ||| ||||||||| | | || |||||||||||| ||||||| ||| || |||| || | ||||| ||||| |
|
|
| T |
7081381 |
tacttgcttatctttagttgttacaatgattctactacctgttccaaaccaatcaagtgttccaattaaaatttctaattgttgtggatccttgacatcg |
7081480 |
T |
|
| Q |
881 |
tcaagaacaataagaaccttcatacgac |
908 |
Q |
| |
|
|||||||||| ||||||||||||||||| |
|
|
| T |
7081481 |
tcaagaacaacaagaaccttcatacgac |
7081508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 782 - 915
Target Start/End: Original strand, 7092768 - 7092901
Alignment:
| Q |
782 |
acttgcttatctctagttgttaaaattattctactatcagatcgaaaccaatcaagagttccaaataacatctctagctgactttcttccttaacatcat |
881 |
Q |
| |
|
||||| |||||| ||||||||| ||| ||||||||||| | || ||||||||||| ||||||| ||| | |||| || | | || || ||||| | |
|
|
| T |
7092768 |
acttgtttatctttagttgttataatgattctactatctgttcctaaccaatcaagtgttccaattaaagtttctacttgtcgtgaatcattgacatcgt |
7092867 |
T |
|
| Q |
882 |
caagaacaataagaaccttcatacgaccaatcct |
915 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| |
|
|
| T |
7092868 |
caagaacaataagaaccttcatacgacgaatcct |
7092901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 631 - 678
Target Start/End: Complemental strand, 7031071 - 7031024
Alignment:
| Q |
631 |
ataatcgaccaccttctttgatagatcatagtactccatttcaagatg |
678 |
Q |
| |
|
||||||||||| |||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
7031071 |
ataatcgaccatcttctttgatagctcatagtactccatttcgagatg |
7031024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 631 - 710
Target Start/End: Original strand, 7075182 - 7075264
Alignment:
| Q |
631 |
ataatcgaccaccttctttgatagatcatagtactccatttcaagatgactttgt---ttaaaggcattcaaattgaaaagct |
710 |
Q |
| |
|
|||||| |||| ||||||||||| | ||||||||||||||||||||| ||||| |||||||||| ||| |||||||||| |
|
|
| T |
7075182 |
ataatccaccattttctttgatagcttatagtactccatttcaagatgcttttgtttattaaaggcatgcaagttgaaaagct |
7075264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 872 - 903
Target Start/End: Complemental strand, 7036545 - 7036514
Alignment:
| Q |
872 |
ttaacatcatcaagaacaataagaaccttcat |
903 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
7036545 |
ttaacatcatcaagaacaataagaaccttcat |
7036514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 292 - 370
Target Start/End: Complemental strand, 7037123 - 7037045
Alignment:
| Q |
292 |
tttcttgtagaatgtcatgcatagatataacattatcttcagaaatagttataagagatttatcttttaacctttctaa |
370 |
Q |
| |
|
||||||||| |||||||||||| |||| || | | | || ||||||||||| ||||| ||||||||||| ||| ||||| |
|
|
| T |
7037123 |
tttcttgtataatgtcatgcattgatacaataatttattgagaaatagttacaagagctttatcttttagcctgtctaa |
7037045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 782 - 837
Target Start/End: Original strand, 42858671 - 42858726
Alignment:
| Q |
782 |
acttgcttatctctagttgttaaaattattctactatcagatcgaaaccaatcaag |
837 |
Q |
| |
|
|||||||||||||| ||||||| || ||||||||| |||||| |||||||||||| |
|
|
| T |
42858671 |
acttgcttatctctggttgttacgatgattctactaccagatccaaaccaatcaag |
42858726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University