View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19548_low_9 (Length: 298)
Name: NF19548_low_9
Description: NF19548
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19548_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 1 - 282
Target Start/End: Complemental strand, 21934153 - 21933874
Alignment:
| Q |
1 |
gaattcatcatcactgtgttatatttttagttcctctggtggatgttttcatatgattgaactcataacggttcttctgtacaaaatagtagttcttcta |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
21934153 |
gaattcatcatcactgtgttatatttttagttcctctggtggatgttttcatatgattgaactcataacggttctt--gtacaaaatagtagttcttcta |
21934056 |
T |
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| Q |
101 |
tatccaatgtcagttgacaaaacccagggtaagcaaggatctacaagaacaaaacgtatttttagtatacggtaatcaacgagttaccaaataatttaca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21934055 |
tatccaatgtcagttgacaaaacccagggtaagcaaggatctacaagaacaaaacgtatttttagtatacggtaatcaacgagttaccaaataatttaca |
21933956 |
T |
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| Q |
201 |
aaatgaaaaatcttaccgaaaatctggaatcaacatcacttgaagtcaatttcttctcatacaacaaactgaaattcatcta |
282 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21933955 |
aaatgaaaaatcttaccgaaaatctggaatcaacatcacttgaagtcaatttcttctcatacaacaaactgaaattcatcta |
21933874 |
T |
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