View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19549_low_13 (Length: 266)
Name: NF19549_low_13
Description: NF19549
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19549_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 26038110 - 26038301
Alignment:
| Q |
1 |
ttcaagttgcagagcttgcatcacatcacattacatgttatc-----------ttggccatacatggatattttgaatcttgaatgtcaacgaagacttg |
89 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26038110 |
ttcaagttgcagagcttgcatcacatcacattacatgttatcttggccgtatcttggccatacatggatattttgaatcttgaatgtcaacgaagacttg |
26038209 |
T |
|
| Q |
90 |
tgtatgtggatgaagttgaaggaggtcattacttgattcaagtttggtccaactagtggtggagctagagtaagtgttagatgtggccaatg |
181 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26038210 |
tgtatgtggatggagttgaaggaggtcattacttgattcaagtttggtccaactagtggtggagctagagtaagtgttagatgtggccaatg |
26038301 |
T |
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