View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19551_low_8 (Length: 355)
Name: NF19551_low_8
Description: NF19551
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19551_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 308; Significance: 1e-173; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 14 - 345
Target Start/End: Complemental strand, 46046981 - 46046650
Alignment:
| Q |
14 |
aaaacttgtatctggccactctcctctttctttttctctcagggtcattccaccatgacatactcttcttctttttcaccacagaacgtttttgcagcgt |
113 |
Q |
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| T |
46046981 |
aaaacttgtatctggccactctcctctttctttttctctcagggtcattccaccatgacatgctcttcttctttttcaccacagaacgttctcgcagcgt |
46046882 |
T |
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| Q |
114 |
cttataatttttcaccacagaacgttctcgcgatgtctcataataattataattagagtacagagatggagagttcatgctcctcccaacccacaatttg |
213 |
Q |
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|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |
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| T |
46046881 |
ctcataatttttcaccacagaacgttctcgcgatgtctcataataattataattagagtacagagatggagagttaacgctcctcccaacccacaatttg |
46046782 |
T |
|
| Q |
214 |
gtgttgccgatgcttctcacatttgcatcatgtaggttggtaccagctgaccgacctagctggtattggagcacctccatctctgaaccctatatctttg |
313 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46046781 |
gtgttgccgatgcttctcacatttgcatcatgtaggttggtaccagctgaccgacctagctggtattggagcacctccatctctgaaccctatatctttg |
46046682 |
T |
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| Q |
314 |
ttgatatatctatgtttttcgtttctcctatg |
345 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
46046681 |
ttgatatatctatgtttttcgtttctcctatg |
46046650 |
T |
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