View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19554_low_7 (Length: 317)
Name: NF19554_low_7
Description: NF19554
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19554_low_7 |
 |  |
|
Alignment Details
Target: chr4 (Bit Score: 186; Significance: 1e-101; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 38 - 306
Target Start/End: Complemental strand, 12888750 - 12888485
Alignment:
| Q |
38 |
ttgttagtgcgctgctgtttttggtgaagtttcgaatggaggtgatgcagggagtaatgttgctgtcttgggggatgtccaagtggtggtgatgcagttt |
137 |
Q |
| |
|
|||||| || ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||| | |
|
|
| T |
12888750 |
ttgttaatgtgctgctgtttttggtgaagtttcaaatggaggtgatgcagggagtggtgttgctgtcttaggtgatgtccaagtggtggtgatgcagtct |
12888651 |
T |
 |
| Q |
138 |
gcatgtggtgatctcagatctaaggtcatggtttattgagttgatggtgattttggtggttgttggtgatggatatcacaagtgacggttgttggtgttg |
237 |
Q |
| |
|
|| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||| |||||||||||||| |
|
|
| T |
12888650 |
gcgtgtggtgatctcaaatctaaggtcatggtttattgagttgatggtaattttggtggttgttggtgatgggtatcacaggtggtggttgttggtgttg |
12888551 |
T |
 |
| Q |
238 |
agttgggaggcgaagtttactgtctctttcttgtgtggtggtgagctcaagggtgtggcgatgatgatg |
306 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||| |
|
|
| T |
12888550 |
agttgggaggcgaagtttactgtctctttcttgtgt-gtggtgagttcaa--gtgtggcgatgatgatg |
12888485 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 246
Target Start/End: Original strand, 46879468 - 46879551
Alignment:
| Q |
164 |
catggtttattgagttgatggtgattttggtggttgttggtgatggatatcacaag-tgacggttgttggtgttgagttgggag |
246 |
Q |
| |
|
|||| ||||||||||| ||||||||||| ||| ||||| ||||||| |||| |||| || ||||||||||||||||||||||| |
|
|
| T |
46879468 |
catgttttattgagttaatggtgattttagtgattgtttgtgatgggtatctcaagatggtggttgttggtgttgagttgggag |
46879551 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 155; Significance: 3e-82; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 38 - 306
Target Start/End: Complemental strand, 36593404 - 36593140
Alignment:
| Q |
38 |
ttgttagtgcgctgctgtttttggtgaagtttcgaatggaggtgatgcagggagtaatgttgctgtcttgggggatgtccaagtggtggtgatgcagttt |
137 |
Q |
| |
|
||||||||| ||| |||||||| |||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||| ||| | |
|
|
| T |
36593404 |
ttgttagtgtgctactgttttttgtgaagtttcgaatggaggtgatgcagggagtggtgttgctgttttggatgatgtccaagtggtggtgatgtagtct |
36593305 |
T |
 |
| Q |
138 |
gcatgtggtgatctcagatctaaggtcatggtttattgagttgatggtgattttggtggttgttggtgatggatatcacaagtgacggttgttggtgttg |
237 |
Q |
| |
|
| | |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||| |||||||||| ||| |||||||||| |
|
|
| T |
36593304 |
gtgtttggtgatctcagatctaaggtcatggattattgagttgatggttattttggtggttgtttgtgatgggtatcacaagt---ggtggttggtgttg |
36593208 |
T |
 |
| Q |
238 |
agttgggaggcgaagtttactgtctctttcttgtgtggtggtgagctcaagggtgtggcgatgatgatg |
306 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||| ||| || ||||| ||||||||||||| |
|
|
| T |
36593207 |
agttgggaggcgaagtttactgtctctttcttgtg-ggtggggagttcgggggtggggcgatgatgatg |
36593140 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 147; Significance: 2e-77; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 38 - 306
Target Start/End: Complemental strand, 20519504 - 20519239
Alignment:
| Q |
38 |
ttgttagtgcgctgctgtttttggtgaagtttcgaatggaggtgatgcagggagtaatgttgctgtcttgggggatgtccaagtggtggtgatgcagttt |
137 |
Q |
| |
|
||||||||| || |||||||||||||||||| |||||||||||||| |||||||| ||||||||| || || |||||||||||||||||||| ||| | |
|
|
| T |
20519504 |
ttgttagtgtgcaactgtttttggtgaagttttgaatggaggtgatgtagggagtagtgttgctgttttaggtgatgtccaagtggtggtgattgagtct |
20519405 |
T |
 |
| Q |
138 |
gcatgtggtgatctcagatctaaggtcatggtttattgagttgatggtgattttggtggttgttggtgatggatatcacaagtgacggttgttggtgttg |
237 |
Q |
| |
|
|| | | ||||||||||||||||| |||||||| |||| |||||||| |||||||||||||||||||||||| ||||| |||| ||| |||||||||| |
|
|
| T |
20519404 |
gcgttttgtgatctcagatctaagatcatggttgattgtgttgatggagattttggtggttgttggtgatgggtatcataagt---ggtggttggtgttg |
20519308 |
T |
 |
| Q |
238 |
agttgggaggcgaagtttactgtctctttcttgtgtggtggtgagctcaagggtgtggcgatgatgatg |
306 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||| || |||| |||||||||||||| |
|
|
| T |
20519307 |
agttgggaggcgaagtttattgtctctttcttgtgtggtggtgagttcgggggtatggcgatgatgatg |
20519239 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 41 - 306
Target Start/End: Original strand, 38149085 - 38149348
Alignment:
| Q |
41 |
ttagtgcgctgctgtttttggtgaagtttcgaatggaggtgatgcagggagtaatgttgctgtcttgggggatgtccaagtggtggtgatgcagtttgca |
140 |
Q |
| |
|
|||||| ||| |||||||| ||||||||| |||||||||||||||||||||| || | |||| |||| ||||| ||||||||||||||||| || |
|
|
| T |
38149085 |
ttagtgtgctactgttttttgtgaagttttgaatggaggtgatgcagggagtggtgcttctgttttggatgatgtgacagtggtggtgatgcagtctgtg |
38149184 |
T |
 |
| Q |
141 |
tgtggtgatctcagatctaaggtcatggtttattgagttgatggtgattttggtggttgttggtgatggatatcacaagtgacggttgttggtgttgagt |
240 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| ||| ||||||||||||| |
|
|
| T |
38149185 |
tttggtgatctcagatctaaggtcatggtttattgagttgatggttattttggtggttgttggtgatgagtatcacaagt---ggtggttggtgttgagt |
38149281 |
T |
 |
| Q |
241 |
tgggaggcgaagtttactgtctctttcttgtgtggtggtgagctc-aagggtgtggcgatgatgatg |
306 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
38149282 |
tgggaggcgaagtttattgtctctttcttgtgtggtggtgagttcggggggtgtggcgatgatgatg |
38149348 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 38 - 306
Target Start/End: Original strand, 32919078 - 32919341
Alignment:
| Q |
38 |
ttgttagtgcgctgctgtttttggtgaagtttcgaatggaggtgatgcagggagtaatgttgctgtcttgggggatgtccaagtggtggtgatgcagttt |
137 |
Q |
| |
|
||||||||| ||| |||||||| |||||||||||||||||||||||||| ||||| || |||||| |||| ||||| ||||||||||||||||||| | |
|
|
| T |
32919078 |
ttgttagtgtgctactgttttttgtgaagtttcgaatggaggtgatgcaaggagtg-tgctgctgttttggatgatgttcaagtggtggtgatgcagtct |
32919176 |
T |
 |
| Q |
138 |
gcatgtggtgatctcagatctaaggtcatggtttattgagttgatggtgattttggtggttgttggtgatggatatcacaagtgacggttgttggtgttg |
237 |
Q |
| |
|
| | ||||||||||| |||||||||||| ||||||||||||||||| |||| |||||||||||||||||| ||||||||||| || |||||||||| |
|
|
| T |
32919177 |
gtgtttggtgatctcatatctaaggtcataatttattgagttgatggttattt-ggtggttgttggtgatgggtatcacaagtg---gtggttggtgttg |
32919272 |
T |
 |
| Q |
238 |
agttgggaggcgaagtttactgtctctttcttgtgtggtggtgagctcaagggtgtggcgatgatgatg |
306 |
Q |
| |
|
||||||||||||||||| ||| ||||||||||||||||||||||| || ||||||||| ||||||||| |
|
|
| T |
32919273 |
agttgggaggcgaagttcactatctctttcttgtgtggtggtgagttcgtgggtgtggcaatgatgatg |
32919341 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 142; Significance: 2e-74; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 38 - 306
Target Start/End: Complemental strand, 49359061 - 49358794
Alignment:
| Q |
38 |
ttgttagtgcgctgctgtttttggtgaagtttcgaatggaggtgatgcagggagtaatgttgctgtcttgggggatgtccaagtggtggtgatgcagttt |
137 |
Q |
| |
|
||||||||| | || ||||||||||||||||||||||| |||||||| ||||| | | || |||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
49359061 |
ttgttagtgtgatgttgtttttggtgaagtttcgaatgaaggtgatgtagggaatggtcttcctgtcttgggtgatgtccaagtggtg---atgcagttt |
49358965 |
T |
 |
| Q |
138 |
gcatgtggtgatctcagatctaaggtcatggtttattgagttgatggtgattttggtggttgttggtgatggatatcacaagtgacggttgttggtgttg |
237 |
Q |
| |
|
|| ||||||||| ||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||| |
|
|
| T |
49358964 |
gcgtgtggtgatatcagatctaaggttatggtttattaagttcatggtgattttggtggttgttggtgatgggtatcacaagtggtggtttttggtgttg |
49358865 |
T |
 |
| Q |
238 |
agttgggaggcgaa--gtttactgtctctttcttgtgtggtggtgagctcaagggtgtggcgatgatgatg |
306 |
Q |
| |
|
|| ||| ||||||| ||| |||||||||||||||||||| |||||| ||| ||||||||||||||||||| |
|
|
| T |
49358864 |
aggtggaaggcgaaatgttcactgtctctttcttgtgtggcggtgagttcaggggtgtggcgatgatgatg |
49358794 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 138; Significance: 4e-72; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 41 - 302
Target Start/End: Complemental strand, 22697043 - 22696786
Alignment:
| Q |
41 |
ttagtgcgctgctgtttttggtgaagtttcgaatggaggtgatgcagggagtaatgttgctgtcttgggggatgtccaagtggtggtgatgcagtttgca |
140 |
Q |
| |
|
|||||| ||| |||||||||||||||||| |||||||||||||| |||||| | ||||||||||||||| ||||||||||||| ||||||||||| | | |
|
|
| T |
22697043 |
ttagtgagctactgtttttggtgaagttttgaatggaggtgatgtagggagcagtgttgctgtcttgggtgatgtccaagtggcggtgatgcagtctacg |
22696944 |
T |
 |
| Q |
141 |
tgtggtgatctcagatctaaggtcatggtttattgagttgatggtgattttggtggttgttggtgatggatatcacaagtgacggttgttggtgttgagt |
240 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| | ||||||||||| ||||||||||||| || |
|
|
| T |
22696943 |
tgtggtgatctcagatctaaggtcatggattattgagttgatggtga------tggttgttggtgatcggtatcacaagtggtggttgttggtgtttagc |
22696850 |
T |
 |
| Q |
241 |
tgggaggcgaa--gtttactgtctctttcttgtgtggtggtgagctcaagggtgtggcgatgat |
302 |
Q |
| |
|
||||||||||| ||| ||||||||||||||||||||||||||| | ||||||||||||||| |
|
|
| T |
22696849 |
tgggaggcgaaatgttcactgtctctttcttgtgtggtggtgagtttgggggtgtggcgatgat |
22696786 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 38 - 208
Target Start/End: Original strand, 34501257 - 34501420
Alignment:
| Q |
38 |
ttgttagtgcgctgctgtttttggtgaagtttcgaatggaggtgatgcagggagtaatgttgctgtcttgggggatgtccaagtggtggtgatgcagttt |
137 |
Q |
| |
|
||||||||| ||| || |||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||| |||||||||| | |
|
|
| T |
34501257 |
ttgttagtgtgctactatttttggtgaagtttcgaatggaggtgatgttgggagtggtgttgctgtcttgggtgatgtccaagtggtagtgatgcagtct |
34501356 |
T |
 |
| Q |
138 |
gcatgtggtgatctcagatctaaggtcatggtttattgagttgatggtgattttggtggttgttggtgatg |
208 |
Q |
| |
|
|| |||||| ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
34501357 |
gcgtgtggt-------gatataaggtcatggtatattgagttgatggtgattttagtggttgttggtgatg |
34501420 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 211 - 306
Target Start/End: Original strand, 34502715 - 34502810
Alignment:
| Q |
211 |
tatcacaagtgacggttgttggtgttgagttgggaggcgaagtttactgtctctttcttgtgtggtggtgagctcaagggtgtggcgatgatgatg |
306 |
Q |
| |
|
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||| |||||||||| |
|
|
| T |
34502715 |
tatcacaagtggtggttgttgctgttgagttgggaggcgaagtttactgtctctttcttctgtggtggtgagtttgagggtgtggagatgatgatg |
34502810 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 119; Significance: 8e-61; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 38 - 305
Target Start/End: Complemental strand, 36934746 - 36934480
Alignment:
| Q |
38 |
ttgttagtgcgctgctgttttt-ggtgaagtttcgaatggaggtgatgcagggagtaatgttgctgtcttgggggatgtccaagtggtggtgatgcagtt |
136 |
Q |
| |
|
|||||||||||||| ||||||| |||||||||||||| |||||||||||||||||| || |||| ||||||| |||||||||||||||||||||||| |
|
|
| T |
36934746 |
ttgttagtgcgctgttgttttttggtgaagtttcgaagggaggtgatgcagggagtggtgctgctatcttgggtgatgtccaagtggtggtgatgcagcc |
36934647 |
T |
 |
| Q |
137 |
tgcatgtggtgatc-tcagatctaaggtcatggtttattgagttgatggtgattttggtggttgttggtgatggatatcacaagtgacggttgttggtgt |
235 |
Q |
| |
|
|| |||||||||| ||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||| ||| ||||||| |
|
|
| T |
36934646 |
tgagtgtggtgatcttcagatcgaaggtcatggtttatt--gttgatggtaattttggtggttgttggtgatgggtatcacaagtggtggtgtttggtgt |
36934549 |
T |
 |
| Q |
236 |
tgagttgggaggcgaa--gtttactgtctctttcttgtgtggtggtgagctcaagggtgtggcgatgatgat |
305 |
Q |
| |
|
|||||||||||||||| || |||||||| |||| |||||||||||| || ||||||||||||||||| |
|
|
| T |
36934548 |
tgagttgggaggcgaaatattcactgtctc-ttct--tgtggtggtgagttcggaggtgtggcgatgatgat |
36934480 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 38 - 170
Target Start/End: Original strand, 5888799 - 5888932
Alignment:
| Q |
38 |
ttgttagtgcgctgctgtttttggtgaagtttcgaatggaggtgatgcagggagtaatgttgctgtcttgggggatgtccaagtggtggtgatgcagttt |
137 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||| |||| |||| ||||||| ||||||| ||||||||||||||||||||| ||| | |
|
|
| T |
5888799 |
ttgttagtgtgctgctgtttttggtgaagtttcgaatggaggtgctgcatagagtggtgttgctatcttgggtgatgtccaagtggtggtgatgtagtct |
5888898 |
T |
 |
| Q |
138 |
gcatgtggtgatc-tcagatctaaggtcatggtt |
170 |
Q |
| |
|
||||||||||||| ||| |||||||||| ||||| |
|
|
| T |
5888899 |
gcatgtggtgatcttcatatctaaggtcgtggtt |
5888932 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 5892651 - 5892769
Alignment:
| Q |
166 |
tggtttattgagttgatggtgattttggtggttgttggtgatggatatcacaagtgacggttgttggtgttgagttgggaggcgaa--gtttactgtctc |
263 |
Q |
| |
|
|||| ||||||||||||||||||||||||| | ||| ||||||| ||||||||||| ||| |||||||| |||||||||||||| ||| |||||||| |
|
|
| T |
5892651 |
tggtgtattgagttgatggtgattttggtgttcgttagtgatgggtatcacaagtggtggtgtttggtgttaagttgggaggcgaaatgttcactgtctc |
5892750 |
T |
 |
| Q |
264 |
tttcttgtgtggtggtgag |
282 |
Q |
| |
|
||||||||||||| ||||| |
|
|
| T |
5892751 |
tttcttgtgtggttgtgag |
5892769 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 100; Significance: 2e-49; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 38 - 205
Target Start/End: Original strand, 27631810 - 27631977
Alignment:
| Q |
38 |
ttgttagtgcgctgctgtttttggtgaagtttcgaatggaggtgatgcagggagtaatgttgctgtcttgggggatgtccaagtggtggtgatgcagttt |
137 |
Q |
| |
|
||||||||| |||||| |||||||||| |||| ||||||||||| |||||||||| || ||| ||||||| |||||||| ||||||||||| ||| | |
|
|
| T |
27631810 |
ttgttagtgtgctgctatttttggtgatgttttgaatggaggtggtgcagggagtggtgatgccatcttgggtgatgtccacatggtggtgatgtagtct |
27631909 |
T |
 |
| Q |
138 |
gcatgtggtgatctcagatctaaggtcatggtttattgagttgatggtgattttggtggttgttggtg |
205 |
Q |
| |
|
|||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27631910 |
gcatgtggtgatctcagatctaaggtaatgatttattgagttgatggtgattttggtggttgttggtg |
27631977 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 185 - 306
Target Start/End: Original strand, 36607593 - 36607717
Alignment:
| Q |
185 |
tgattttggtggttgttggtgatggatatcacaagtgacggt-tgttggtgttgagttgggaggcgaa--gtttactgtctctttcttgtgtggtggtga |
281 |
Q |
| |
|
||||||||||||||||| ||||||| |||||| |||| ||| | ||||||||||||||||||||||| ||| | ||||||||||| ||||| | |||| |
|
|
| T |
36607593 |
tgattttggtggttgttagtgatgggtatcacgagtggtggtgttttggtgttgagttgggaggcgaaatgttcaatgtctctttctcgtgtgatagtga |
36607692 |
T |
 |
| Q |
282 |
gctcaagggtgtggcgatgatgatg |
306 |
Q |
| |
|
| || |||||||| |||||||||| |
|
|
| T |
36607693 |
gttcgggggtgtggtgatgatgatg |
36607717 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 273
Target Start/End: Original strand, 27631967 - 27632018
Alignment:
| Q |
224 |
ggttgttggtgttgagttgggaggcgaa--gtttactgtctctttcttgtgt |
273 |
Q |
| |
|
|||||||||||||||||||||||||||| ||| | |||||||||||||||| |
|
|
| T |
27631967 |
ggttgttggtgttgagttgggaggcgaaatgttcattgtctctttcttgtgt |
27632018 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 162 - 305
Target Start/End: Original strand, 32946613 - 32946756
Alignment:
| Q |
162 |
gtcatggtttattgagttgatggtgattttggtggttgttggtgatggatatcacaagtgacggttgttggtgttgagttgggaggcgaagtttactgtc |
261 |
Q |
| |
|
|||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||| |||||||| |||||| |||||||||||| | | | |
|
|
| T |
32946613 |
gtcatggtttattgagttaatggtaattttggtggttgttggtgatatgtatcacaagtggtggttgttgatgttgatttgggaggcgaaatgttcaccg |
32946712 |
T |
 |
| Q |
262 |
tctttcttgtgtggtggtgagctcaagggtgtggcgatgatgat |
305 |
Q |
| |
|
||||||||||||||||||||| || |||||||| || |||||| |
|
|
| T |
32946713 |
tctttcttgtgtggtggtgagttcgtgggtgtggtgacgatgat |
32946756 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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