View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19555_high_2 (Length: 725)
Name: NF19555_high_2
Description: NF19555
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19555_high_2 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 629; Significance: 0; HSPs: 31)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 629; E-Value: 0
Query Start/End: Original strand, 13 - 691
Target Start/End: Complemental strand, 34544985 - 34544314
Alignment:
| Q |
13 |
aatatacgagggtgactgggttgatggaaaaatgacagggaaaggggtttatagatttgcaaatggggatgtctacattggtaattggaaaaatgataaa |
112 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34544985 |
aatatacgagggtgactgggttgatggaaaaatgacagggaaaggggtttatagatttgcaaatggggatgtctacattggtaattggaaaaatgataaa |
34544886 |
T |
|
| Q |
113 |
atggatggaagagggattatgaattgggttaatggtgatgttttcgatggatgttggtcaaatggacatagacatggatatggagtttatagattttcaa |
212 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34544885 |
atggatggaagagggattatgaattgggttaatggtgatgttttcaatggatgttggtcaaatggacatagacatggatatggagtttatagattttcaa |
34544786 |
T |
|
| Q |
213 |
atgggaatgtctacgcaggaaattttaaaaatgataaaatggacggaagagggattatgaattggtcaaatggaacaatgtacgagggcgattgggttga |
312 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34544785 |
atgggaatgtctacgcaggaaattttaaaaatgataaaatggacggaagagggattatgaattggtcaaatggaacaatgtacgagggcgattgggttga |
34544686 |
T |
|
| Q |
313 |
tggacaaatgatagggaatggattgatgataccaggctttctatgtgcatttttgaagactatcagacccattattatctgaagcttaattttcaacgta |
412 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34544685 |
tggacaaatgatagggaatggattgatgataccaggctttctatgtgcatttttgaagactatcagacccattattatctgaagcttaattttcaa---- |
34544590 |
T |
|
| Q |
413 |
gcgtcgtgtaagttatttgatctttaatagaattatggaaaactggtatattattatcacctttctatccactgttctatacttagttcttttataatca |
512 |
Q |
| |
|
|| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
34544589 |
---tcatgtaagttatttgatctttaatagtattatggaaaactggtatattattatcacctttctatccactgttctatacttaattcttttataatca |
34544493 |
T |
|
| Q |
513 |
cggccctgtctagaaaattatctgactaatagatcagatggcttcaagtctttatgaaaatggcttcagactgttcgataagttccatgaagttttagtt |
612 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34544492 |
cggccctgtctagaaaattatttgactaatagatcagatggcttcaagtctttatgaaaatggcttcagactgttcgataagttccatgaagttttagtt |
34544393 |
T |
|
| Q |
613 |
tattagtctataacataagaaataatttattatgtaagttatgcgtttaacgttgtaaactgaaaattagaaacactga |
691 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
34544392 |
tattagtctataacataagaaataatttattatgtaagttatgcgtttaacgttgtaaactgaaaattagaaatactga |
34544314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 330; E-Value: 0
Query Start/End: Original strand, 59 - 623
Target Start/End: Complemental strand, 34916314 - 34915731
Alignment:
| Q |
59 |
gtttatagatttgcaaatggggatgtctacattggtaattggaaaaatgataaaatggatggaagagggattatgaattgggttaatggtgatgttttcg |
158 |
Q |
| |
|
|||||||||| ||| ||||| | ||||||| ||| |||||| |||| | ||| |||||||| |||||||||||| |||| ||| ||||||||||||| |
|
|
| T |
34916314 |
gtttatagatctgctaatggaaacgtctacactggaaattgggaaaaaggggaaagggatggaaaagggattatgaaatgggctaacggtgatgttttcg |
34916215 |
T |
|
| Q |
159 |
atggatgttggtcaaatggacatagacatggatatggagtttatagattttcaaatgggaatgtctacgcaggaaattttaaaaatgataaaatggacgg |
258 |
Q |
| |
|
|||| | ||||||||||||||| | |||||| |||||||||||||||||| ||||||| |||||||| | ||||||| |||||| |||||||||| || |
|
|
| T |
34916214 |
atggttattggtcaaatggacagaaacatggctatggagtttatagatttgcaaatggagatgtctacactggaaattggaaaaataataaaatggatgg |
34916115 |
T |
|
| Q |
259 |
aagagggattatgaattggtcaaatggaacaatgtacgagggcgattgggttgatggacaaatgatagggaatggattgatgataccaggctttctatgt |
358 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34916114 |
aagagggattatgaattggtcaaatggaacaatgtacgagggcgattgggttgatggacaaatgatagggaatggattgatgataccaggctttctatgt |
34916015 |
T |
|
| Q |
359 |
gcatttttgaagactatcagacccattattatctgaagcttaattttcaacgtagcgtcgtgtaagttatttgatctttaatagaattatggaaaactgg |
458 |
Q |
| |
|
| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
34916014 |
acctttttgaagactatcagacccattatcatctgaagcttaattttcaacttagcgtcatgtaagttatttgatctttaatagtattatggaaaactgg |
34915915 |
T |
|
| Q |
459 |
ta-------------------tattattatcacctttctatccactgttctatacttagttcttttataatcacggccctgtctagaaaattatctgact |
539 |
Q |
| |
|
|| ||||||| ||| ||||||||| ||||||||||||||| || ||||||||||| |||| ||| ||||||||||| ||||| |
|
|
| T |
34915914 |
tatgatattcatggttattattattattttcatctttctatcaactgttctatacttaattattttataatcatggccttgtatagaaaattatttgact |
34915815 |
T |
|
| Q |
540 |
aatagatcagatggcttcaagtctttatgaaaatggcttcagactgttcgataagttccatgaagttttagtttattagtctat |
623 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
34915814 |
aatagatcagatggcttcaaggctttatgaaaatggcttcagactgttcgataagttccatgaggttttagtttattagtctat |
34915731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 59 - 206
Target Start/End: Original strand, 39848697 - 39848844
Alignment:
| Q |
59 |
gtttatagatttgcaaatggggatgtctacattggtaattggaaaaatgataaaatggatggaagagggattatgaattgggttaatggtgatgttttcg |
158 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || ||||||||||| || ||||||||||||| ||||||||||| ||||||| ||||||||| |||| |
|
|
| T |
39848697 |
gtttatagatttgcaaatggggatgtctacatcggaaattggaaaaaagacaaaatggatggaacagggattatgagttgggttgttggtgatgtcttcg |
39848796 |
T |
|
| Q |
159 |
atggatgttggtcaaatggacatagacatggatatggagtttatagat |
206 |
Q |
| |
|
|||| |||||||||||||||| || ||||||||||||||||||||||| |
|
|
| T |
39848797 |
atggttgttggtcaaatggacttatacatggatatggagtttatagat |
39848844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 59 - 223
Target Start/End: Complemental strand, 38453777 - 38453613
Alignment:
| Q |
59 |
gtttatagatttgcaaatggggatgtctacattggtaattggaaaaatgataaaatggatggaagagggattatgaattgggttaatggtgatgttttcg |
158 |
Q |
| |
|
||||||||||||| ||||||||||||||||| || ||||||||| | || |||||||||||| |||||| |||| ||||| ||||||||||||||| | |
|
|
| T |
38453777 |
gtttatagatttgtaaatggggatgtctacaccggaaattggaaagaagacgaaatggatggaacagggatcatgagttgggctaatggtgatgtttttg |
38453678 |
T |
|
| Q |
159 |
atggatgttggtcaaatggacatagacatggatatggagtttatagattttcaaatgggaatgtc |
223 |
Q |
| |
|
|||| |||||||||||||||| || |||||||| |||||||| ||||||| |||||||| ||||| |
|
|
| T |
38453677 |
atggttgttggtcaaatggacttatacatggatctggagtttttagatttgcaaatggggatgtc |
38453613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 59 - 277
Target Start/End: Complemental strand, 34916590 - 34916372
Alignment:
| Q |
59 |
gtttatagatttgcaaatggggatgtctacattggtaattggaaaaatgataaaatggatggaagagggattatgaattgggttaatggtgatgttttcg |
158 |
Q |
| |
|
|||||||||| ||||||||| | ||||||| ||| |||||| |||| | ||| | |||||| |||||||||||| |||| ||| | ||||||||||| |
|
|
| T |
34916590 |
gtttatagatctgcaaatggaaacgtctacactggaaattgggaaaaaggggaaaggcatggaaaagggattatgaaatgggctaacgatgatgttttcg |
34916491 |
T |
|
| Q |
159 |
atggatgttggtcaaatggacatagacatggatatggagtttatagattttcaaatgggaatgtctacgcaggaaatt-ttaaaaatgataaaatggacg |
257 |
Q |
| |
|
|||| | ||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||| || ||||||| ||||| || |||| ||| | |
|
|
| T |
34916490 |
atggttattggtcaaatggacataaacatggatatggagtttatagatttgcaaatggggatgtctatgctggaaattgggaaaaaggagaaaa-ggatg |
34916392 |
T |
|
| Q |
258 |
gaagagggattatgaattgg |
277 |
Q |
| |
|
||| |||||||||||||||| |
|
|
| T |
34916391 |
gaaaagggattatgaattgg |
34916372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 59 - 223
Target Start/End: Complemental strand, 34533889 - 34533725
Alignment:
| Q |
59 |
gtttatagatttgcaaatggggatgtctacattggtaattggaaaaatgataaaatggatggaagagggattatgaattgggttaatggtgatgttttcg |
158 |
Q |
| |
|
|||||||||| |||||||||||||||| ||| ||| |||||||||| | || ||||||| ||||||||||| |||| |||||||| |||||||| |
|
|
| T |
34533889 |
gtttatagatatgcaaatggggatgtccacactggacattggaaaaaagggggaaatgatggaaaagggattatgagatgggctaatggtgttgttttcg |
34533790 |
T |
|
| Q |
159 |
atggatgttggtcaaatggacatagacatggatatggagtttatagattttcaaatgggaatgtc |
223 |
Q |
| |
|
|||| |||||||||||||||| |||||||||||||||||||| ||||||| |||||||| ||||| |
|
|
| T |
34533789 |
atggttgttggtcaaatggacttagacatggatatggagtttgtagatttacaaatggggatgtc |
34533725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 59 - 223
Target Start/End: Original strand, 38632986 - 38633149
Alignment:
| Q |
59 |
gtttatagatttgcaaatggggatgtctacattggtaattggaaaaatgataaaatggatggaagagggattatgaattgggttaatggtgatgttttcg |
158 |
Q |
| |
|
||||||| |||||||||||||||||| ||| | || ||||||||||| || ||||||||||||| ||||||||||| ||||| || ||||||||| |||| |
|
|
| T |
38632986 |
gtttataaatttgcaaatggggatgtttacgtaggaaattggaaaaa-gacaaaatggatggaatagggattatgacttgggctactggtgatgtcttcg |
38633084 |
T |
|
| Q |
159 |
atggatgttggtcaaatggacatagacatggatatggagtttatagattttcaaatgggaatgtc |
223 |
Q |
| |
|
|||| |||||||||||||| | || |||||||| |||||||||||||| | | |||||| ||||| |
|
|
| T |
38633085 |
atggttgttggtcaaatgggcttatacatggatctggagtttatagatatgctaatggggatgtc |
38633149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 59 - 277
Target Start/End: Original strand, 39848556 - 39848777
Alignment:
| Q |
59 |
gtttatagatttgcaaatggggatgtctacattggtaattggaaaa-atgataaaatggatg---gaagagggattatgaattgggttaatggtgatgtt |
154 |
Q |
| |
|
|||||||||| |||||||||||||||| |||||| |||||||||| ||| |||||||||| | |||| |||| | |||||| ||||||||||||| |
|
|
| T |
39848556 |
gtttatagatccgcaaatggggatgtctccattggaaattggaaaacatgg-aaaatggatgatgggagagcgattttcgattgggctaatggtgatgtt |
39848654 |
T |
|
| Q |
155 |
ttcgatggatgttggtcaaatggacatagacatggatatggagtttatagattttcaaatgggaatgtctacgcaggaaattttaaaaatgataaaatgg |
254 |
Q |
| |
|
|| ||||| ||| ||||||||||| ||||||||||| |||||||||||||||| |||||||| |||||||| ||||||| ||||| || ||||||| |
|
|
| T |
39848655 |
tttgatggttgtatgtcaaatggacttagacatggatttggagtttatagatttgcaaatggggatgtctacatcggaaattggaaaaaagacaaaatgg |
39848754 |
T |
|
| Q |
255 |
acggaagagggattatgaattgg |
277 |
Q |
| |
|
| |||| ||||||||||| |||| |
|
|
| T |
39848755 |
atggaacagggattatgagttgg |
39848777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 59 - 236
Target Start/End: Complemental strand, 34916452 - 34916275
Alignment:
| Q |
59 |
gtttatagatttgcaaatggggatgtctacattggtaattgg-aaaaatgataaaatggatggaagagggattatgaattgggttaatggtgatgttttc |
157 |
Q |
| |
|
||||||||||||||||||||||||||||| ||| |||||| ||||| || |||| |||||||| ||||||||||||||||| |||||||| | ||||| |
|
|
| T |
34916452 |
gtttatagatttgcaaatggggatgtctatgctggaaattgggaaaaaggagaaaa-ggatggaaaagggattatgaattggggtaatggtgctattttc |
34916354 |
T |
|
| Q |
158 |
gatggatgttggtcaaatggacatagacatggatatggagtttatagattttcaaatgggaatgtctacgcaggaaatt |
236 |
Q |
| |
|
||||| | |||||||||||||| | ||||||||||||||||||||||| | | ||||| || |||||| | ||||||| |
|
|
| T |
34916353 |
gatggttattggtcaaatggactttcacatggatatggagtttatagatctgctaatggaaacgtctacactggaaatt |
34916275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 59 - 236
Target Start/End: Original strand, 38632709 - 38632884
Alignment:
| Q |
59 |
gtttatagatttgcaaatggggatgtctacattggtaattggaaaaatgataaaatggatggaagagggattatgaattgggttaatggtgatgttttcg |
158 |
Q |
| |
|
|||||||||| |||| ||||| |||||||||| || ||||||||||| || || ||||||||| ||| ||||||| ||||| || ||||||||| |||| |
|
|
| T |
38632709 |
gtttatagatatgcagatgggcatgtctacatgggaaattggaaaaaagacaa--tggatggaaaaggaattatgagttgggctactggtgatgtcttcg |
38632806 |
T |
|
| Q |
159 |
atggatgttggtcaaatggacatagacatggatatggagtttatagattttcaaatgggaatgtctacgcaggaaatt |
236 |
Q |
| |
|
|||| ||||||||| |||||| || |||||||| |||||||||||||| | |||||||| |||||||| | ||||||| |
|
|
| T |
38632807 |
atggttgttggtcagatggacttatacatggatttggagtttatagatctgcaaatggggatgtctacactggaaatt |
38632884 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 56 - 223
Target Start/End: Complemental strand, 34534030 - 34533863
Alignment:
| Q |
56 |
ggggtttatagatttgcaaatggggatgtctacattggtaattggaaaaatgataaaatggatggaagagggattatgaattgggttaatggtgatgttt |
155 |
Q |
| |
|
||||||||||||| || |||||| ||||| || | || |||||| |||||| ||||| ||||| | ||||||||||||||||||| |||||||||||| |
|
|
| T |
34534030 |
ggggtttatagatatgtaaatggagatgtttatagaggaaattgggaaaatgggaaaatagatgggaaagggattatgaattgggttgatggtgatgttt |
34533931 |
T |
|
| Q |
156 |
tcgatggatgttggtcaaatggacatagacatggatatggagtttatagattttcaaatgggaatgtc |
223 |
Q |
| |
|
| ||||| |||||||||||| ||| || | ||||||||||||||||||||| | |||||||| ||||| |
|
|
| T |
34533930 |
ttgatggttgttggtcaaatagacttaaagatggatatggagtttatagatatgcaaatggggatgtc |
34533863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 59 - 277
Target Start/End: Original strand, 38632845 - 38633065
Alignment:
| Q |
59 |
gtttatagatttgcaaatggggatgtctacattggtaattggaaaaatgataaaatggat---ggaagagggattatgaattgggttaatggtgatgttt |
155 |
Q |
| |
|
|||||||||| |||||||||||||||||||| ||| |||||||||| || ||||||||| || ||| ||||| || ||| | ||| |||||||||| |
|
|
| T |
38632845 |
gtttatagatctgcaaatggggatgtctacactggaaattggaaaatagacaaaatggattatgggagatggattttggattcagctaacggtgatgttt |
38632944 |
T |
|
| Q |
156 |
tcgatggatgttggtcaaatggacatagacatggatatggagtttatagattttcaaatgggaatgtctacgcaggaaattttaaaaatgataaaatgga |
255 |
Q |
| |
|
| ||||| | || ||||||||||| |||| |||||| ||||||||||| |||| |||||||| |||| |||| |||||||| ||||| || |||||||| |
|
|
| T |
38632945 |
ttgatggttatttgtcaaatggacttagatatggatttggagtttataaatttgcaaatggggatgtttacgtaggaaattggaaaaa-gacaaaatgga |
38633043 |
T |
|
| Q |
256 |
cggaagagggattatgaattgg |
277 |
Q |
| |
|
|||| ||||||||||| |||| |
|
|
| T |
38633044 |
tggaatagggattatgacttgg |
38633065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 70 - 222
Target Start/End: Complemental strand, 34539179 - 34539027
Alignment:
| Q |
70 |
tgcaaatggggatgtctacattggtaattggaaaaatgataaaatggatggaagagggattatgaattgggttaatggtgatgttttcgatggatgttgg |
169 |
Q |
| |
|
||||||||| |||||||| | ||| ||||||||||| |||| ||||||| |||||||||||||||| |||||| |||||||| |||| |||||| |
|
|
| T |
34539179 |
tgcaaatggcgatgtctataatggaaattggaaaaaaaggaaaagagatggaaatgggattatgaattgggctaatggcgatgtttttaatggttgttgg |
34539080 |
T |
|
| Q |
170 |
tcaaatggacatagacatggatatggagtttatagattttcaaatgggaatgt |
222 |
Q |
| |
|
|||||||||| ||||||||| | |||||||||||||||| |||||||| |||| |
|
|
| T |
34539079 |
tcaaatggacttagacatggttctggagtttatagatttgcaaatggggatgt |
34539027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 144 - 226
Target Start/End: Complemental strand, 34549262 - 34549180
Alignment:
| Q |
144 |
atggtgatgttttcgatggatgttggtcaaatggacatagacatggatatggagtttatagattttcaaatgggaatgtctac |
226 |
Q |
| |
|
||||||||||||| ||||| |||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34549262 |
atggtgatgtttttgatggttgttggtctaatggacttacacatggatatggagtttatagattttcaaatgggaatgtctac |
34549180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 124 - 236
Target Start/End: Complemental strand, 34916663 - 34916551
Alignment:
| Q |
124 |
agggattatgaattgggttaatggtgatgttttcgatggatgttggtcaaatggacatagacatggatatggagtttatagattttcaaatgggaatgtc |
223 |
Q |
| |
|
||||||||||||||||| |||||||| | |||||||||| |||||||||||||||| | ||||||||||||||||||||||| | ||||||| || ||| |
|
|
| T |
34916663 |
agggattatgaattggggtaatggtgctattttcgatggttgttggtcaaatggactttcacatggatatggagtttatagatctgcaaatggaaacgtc |
34916564 |
T |
|
| Q |
224 |
tacgcaggaaatt |
236 |
Q |
| |
|
||| | ||||||| |
|
|
| T |
34916563 |
tacactggaaatt |
34916551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 84 - 216
Target Start/End: Original strand, 36951413 - 36951545
Alignment:
| Q |
84 |
tctacattggtaattggaaaaatgataaaatggatggaagagggattatgaattgggttaatggtgatgttttcgatggatgttggtcaaatggacatag |
183 |
Q |
| |
|
|||| ||||| ||||||||||| | ||||| |||||||| ||||||||||| ||| |||| || |||||||| ||||| ||||||| |||||||| ||| |
|
|
| T |
36951413 |
tctatattggaaattggaaaaaagggaaaatagatggaagggggattatgaagtggtttaacggcgatgtttttgatggttgttggttaaatggacttag |
36951512 |
T |
|
| Q |
184 |
acatggatatggagtttatagattttcaaatgg |
216 |
Q |
| |
|
||| |||| ||||||||||||||||||| |||| |
|
|
| T |
36951513 |
acaaggatctggagtttatagattttcagatgg |
36951545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 38454028 - 38453906
Alignment:
| Q |
84 |
tctacattggtaattggaaaaatgataaaatggatggaagagggattatgaattgggttaatggtgatgttttcgatggatgttggtcaaatggacatag |
183 |
Q |
| |
|
|||||| ||| ||||||||||| ||||||| ||||||||||||| ||||| |||| | ||||||||||||| ||||| |||||||||||| ||| | |
|
|
| T |
38454028 |
tctacactggaaattggaaaaaagataaaagagatggaagagggactatgagttggcctgatggtgatgtttttgatggttgttggtcaaatagacttgt |
38453929 |
T |
|
| Q |
184 |
acatggatatggagtttatagat |
206 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
38453928 |
acatggatatggagtttatagat |
38453906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 59 - 224
Target Start/End: Original strand, 39848418 - 39848583
Alignment:
| Q |
59 |
gtttatagatttgcaaatggggatgtctacattggtaattggaaaaatgataaaatggatggaagagggattatgaattgggttaatggtgatgttttcg |
158 |
Q |
| |
|
|||||||||| |||||||| || |||||| || || | ||||||||| || ||| ||||||| ||||||||||| ||||| || ||| ||||| ||| |
|
|
| T |
39848418 |
gtttatagatatgcaaatgtgggtgtctatatcggaatttggaaaaaacatgaaagggatggattagggattatgagttgggatactggagatgtcttct |
39848517 |
T |
|
| Q |
159 |
atggatgttggtcaaatggacatagacatggatatggagtttatagattttcaaatgggaatgtct |
224 |
Q |
| |
|
|||| |||||||||||||||| | ||||||||||||||||||||||| |||||||| |||||| |
|
|
| T |
39848518 |
atggttgttggtcaaatggacttgcacatggatatggagtttatagatccgcaaatggggatgtct |
39848583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 281 - 440
Target Start/End: Complemental strand, 34538968 - 34538809
Alignment:
| Q |
281 |
aatggaacaatgtacgagggcgattgggttgatggacaaatgatagggaatggattgatgataccaggctttctatgtgcatttttgaagactatcagac |
380 |
Q |
| |
|
||||||||||| ||||||||||||||||| |||||| ||| || |||||| ||| ||||||||| || || |||| |||| | |||| |||| | |
|
|
| T |
34538968 |
aatggaacaatatacgagggcgattgggtggatggagaaaggacagggaacaaattcatgataccaagccttgtatggagatttcttaagagaatcaaat |
34538869 |
T |
|
| Q |
381 |
ccattattatctgaagcttaattttcaacgtagcgtcgtgtaagttatttgatctttaat |
440 |
Q |
| |
|
| ||||||||||||||||||||||||||| |||| || |||||||||||| ||||||||| |
|
|
| T |
34538868 |
ctattattatctgaagcttaattttcaacatagcatcatgtaagttatttcatctttaat |
34538809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 85 - 216
Target Start/End: Original strand, 39848207 - 39848338
Alignment:
| Q |
85 |
ctacattggtaattggaaaaatgataaaatggatggaagagggattatgaattgggttaatggtgatgttttcgatggatgttggtcaaatggacatag- |
183 |
Q |
| |
|
|||| |||| ||||||||||||||||||| ||||||||||||||| || || || ||||||||||||||| |||| |||||||||||| ||| | | |
|
|
| T |
39848207 |
ctacgttggaaattggaaaaatgataaaaaagatggaagagggattgagactttggctaatggtgatgtttttaatggttgttggtcaaat-gactttgt |
39848305 |
T |
|
| Q |
184 |
acatggatatggagtttatagattttcaaatgg |
216 |
Q |
| |
|
| ||||||||||||||| ||||||| ||||||| |
|
|
| T |
39848306 |
atatggatatggagtttttagatttgcaaatgg |
39848338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 34533751 - 34533585
Alignment:
| Q |
59 |
gtttatagatttgcaaatggggatgtctacattggtaattggaaaaatgataaaatggatggaagagggattatgaattgggttaatggtgatgttttcg |
158 |
Q |
| |
|
|||| ||||||| |||||||||||||| ||| ||| |||||||||| | ||| |||||||| |||||||| || |||| ||||||||||||| |
|
|
| T |
34533751 |
gtttgtagatttacaaatggggatgtccacagtggacattggaaaaaaggggaaaaggatggaaaagggattaagagatgggcaggcggtgatgttttcg |
34533652 |
T |
|
| Q |
159 |
atggatgttggtcaaatggacatagacatggatatggagtttatagattttcaaatgggaatgtcta |
225 |
Q |
| |
|
|||| ||||||| |||||||| || |||||||| ||||||||||| || | | |||||| ||||||| |
|
|
| T |
34533651 |
atggttgttggtaaaatggacttaaacatggatctggagtttatacatatgctaatggggatgtcta |
34533585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 206
Target Start/End: Complemental strand, 34534097 - 34534018
Alignment:
| Q |
127 |
gattatgaattgggttaatggtgatgttttcgatggatgttggtcaaatggacatagacatggatatggagtttatagat |
206 |
Q |
| |
|
||||||||| ||||||||| || |||||||||||| |||||||||||||||| || ||||||| |||| |||||||||| |
|
|
| T |
34534097 |
gattatgaagtgggttaatagttgtgttttcgatggttgttggtcaaatggacttaaacatggacatggggtttatagat |
34534018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 208
Target Start/End: Complemental strand, 34548620 - 34548529
Alignment:
| Q |
117 |
atggaagagggattatgaattgggttaatggtgatgttttcgatggatgttggtcaaatggacatagacatggatatggagtttatagattt |
208 |
Q |
| |
|
|||||||||||||||||| |||| |||||||||| |||||||||| | |||||||||||| ||||||||||| || |||||||| |||| |
|
|
| T |
34548620 |
atggaagagggattatgatgtgggctaatggtgatattttcgatggtggctggtcaaatggagttagacatggatttgaagtttatatattt |
34548529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 59 - 277
Target Start/End: Complemental strand, 38453915 - 38453697
Alignment:
| Q |
59 |
gtttatagatttgcaaatggggatgtctacattggtaattggaaaaatgataaaatggatggaagagggattatgaattgggttaatggtgatgttttcg |
158 |
Q |
| |
|
|||||||||| || |||||||||||| ||| ||| ||||||||| | | | ||||||||||||||||| |||||||| ||| |||||| || | |
|
|
| T |
38453915 |
gtttatagatctgtaaatggggatgttaacactggaaattggaaagcagggagattggatggaagagggattttgaattggactaacggtgatcaatttg |
38453816 |
T |
|
| Q |
159 |
atggatgttggtcaaatggacatagacatggatatggagtttatagattttcaaatgggaatgtctacgcaggaaattttaaaaatgataaaatggacgg |
258 |
Q |
| |
|
|||| ||| ||| |||||| |||||||||| |||||||||||||||| ||||||| |||||||| | ||||||| ||| | || ||||||| || |
|
|
| T |
38453815 |
atggttgtctgtcgcatggacttagacatggacttggagtttatagatttgtaaatggggatgtctacaccggaaattggaaagaagacgaaatggatgg |
38453716 |
T |
|
| Q |
259 |
aagagggattatgaattgg |
277 |
Q |
| |
|
|| |||||| |||| |||| |
|
|
| T |
38453715 |
aacagggatcatgagttgg |
38453697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 34916705 - 34916660
Alignment:
| Q |
13 |
aatatacgagggtgactgggttgatggaaaaatgacagggaaaggg |
58 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
34916705 |
aatatacgagggtgactgggttgatggaaaagtgacagggaaaggg |
34916660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 275 - 330
Target Start/End: Complemental strand, 34534156 - 34534101
Alignment:
| Q |
275 |
tggtcaaatggaacaatgtacgagggcgattgggttgatggacaaatgatagggaa |
330 |
Q |
| |
|
|||||| |||||||||| || |||||||||||||||||||||||||||| |||||| |
|
|
| T |
34534156 |
tggtcagatggaacaatatatgagggcgattgggttgatggacaaatgacagggaa |
34534101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 623 - 694
Target Start/End: Complemental strand, 34915695 - 34915624
Alignment:
| Q |
623 |
taacataagaaataatttattatgtaagttatgcgtttaacgttgtaaactgaaaattagaaacactgacag |
694 |
Q |
| |
|
||||||||||||||||||||| |||||||||| || ||| |||||||| ||||||| |||| |||||||| |
|
|
| T |
34915695 |
taacataagaaataatttattgcgtaagttatgtgtgtaatgttgtaaatggaaaattggaaatactgacag |
34915624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 224
Target Start/End: Original strand, 38632551 - 38632633
Alignment:
| Q |
142 |
taatggtgatgttttcgatggatgttggtcaaatggacatagacatggatatggagtttatagattttcaaatgggaatgtct |
224 |
Q |
| |
|
||||||||||||||| |||| |||||||||||||||| | |||||||| |||||||| |||| | |||||||| |||||| |
|
|
| T |
38632551 |
taatggtgatgttttggatgcttgttggtcaaatggacttctacatggatttggagtttttagagctgcaaatggggatgtct |
38632633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 330
Target Start/End: Complemental strand, 34544995 - 34544944
Alignment:
| Q |
279 |
caaatggaacaatgtacgagggcgattgggttgatggacaaatgatagggaa |
330 |
Q |
| |
|
||||||||||||| |||||||| || |||||||||||| |||||| |||||| |
|
|
| T |
34544995 |
caaatggaacaatatacgagggtgactgggttgatggaaaaatgacagggaa |
34544944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 38632647 - 38632738
Alignment:
| Q |
135 |
attgggttaatggtgatgttttcgatggatgttggtcaaatggacatagacatggatatggagtttatagattttcaaatgggaatgtctac |
226 |
Q |
| |
|
|||||| | ||||||||| ||| ||||| ||| ||||||||| ||||||||||| |||||||||||||| | || ||||| |||||||| |
|
|
| T |
38632647 |
attgggctgatggtgatgcttttgatggttgtctatcaaatggatttagacatggatttggagtttatagatatgcagatgggcatgtctac |
38632738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 96
Target Start/End: Complemental strand, 38453639 - 38453602
Alignment:
| Q |
59 |
gtttatagatttgcaaatggggatgtctacattggtaa |
96 |
Q |
| |
|
|||| |||||||||||||||||||||| |||||||||| |
|
|
| T |
38453639 |
gtttttagatttgcaaatggggatgtcgacattggtaa |
38453602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 77; Significance: 2e-35; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 59 - 223
Target Start/End: Original strand, 44474563 - 44474727
Alignment:
| Q |
59 |
gtttatagatttgcaaatggggatgtctacattggtaattggaaaaatgataaaatggatggaagagggattatgaattgggttaatggtgatgttttcg |
158 |
Q |
| |
|
||||||| ||||| ||||||||||||||| || || |||||||||||||| ||||||||||||||||||| |||| |||| ||||||||||||||| | |
|
|
| T |
44474563 |
gtttatacatttgtaaatggggatgtctatatcggaaattggaaaaatgacaaaatggatggaagagggaccatgagttggactaatggtgatgtttttg |
44474662 |
T |
|
| Q |
159 |
atggatgttggtcaaatggacatagacatggatatggagtttatagattttcaaatgggaatgtc |
223 |
Q |
| |
|
| || || ||||||||||||| || |||||||| |||||||| || |||| |||||||| ||||| |
|
|
| T |
44474663 |
aaggttgctggtcaaatggacttatacatggatctggagtttttaaatttgcaaatggggatgtc |
44474727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 75 - 266
Target Start/End: Original strand, 44474441 - 44474632
Alignment:
| Q |
75 |
atggggatgtctacattggtaattggaaaaatgataaaatggatggaagagggattatgaattgggttaatggtgatgttttcgatggatgttggtcaaa |
174 |
Q |
| |
|
|||||||||||||| ||| |||||||||| | ||| ||||||||||||||| | ||||||||| ||||| |||| ||| |||| ||| |||||| |
|
|
| T |
44474441 |
atggggatgtctacgctggaaattggaaaacagggaaattggatggaagagggaatttgaattgggctaatgatgatcattttaatggttgtctgtcaaa |
44474540 |
T |
|
| Q |
175 |
tggacatagacatggatatggagtttatagattttcaaatgggaatgtctacgcaggaaattttaaaaatgataaaatggacggaagaggga |
266 |
Q |
| |
|
||| | ||||||||||| ||||||||||| |||| ||||||| ||||||| ||||||| |||||||| |||||||| |||||||||| |
|
|
| T |
44474541 |
tgggcttagacatggatttggagtttatacatttgtaaatggggatgtctatatcggaaattggaaaaatgacaaaatggatggaagaggga |
44474632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 277
Target Start/End: Original strand, 44474312 - 44474505
Alignment:
| Q |
84 |
tctacattggtaattggaaaaatgataaaatggatggaagagggattatgaattgggttaatggtgatgttttcgatggatgttggtcaaatggacatag |
183 |
Q |
| |
|
|||||||||| ||||||||||| |||| | ||||||||||||||| | | ||||| || ||| |||||||| ||| | |||||||||||| | | |
|
|
| T |
44474312 |
tctacattggaaattggaaaaaagatacaccagatggaagagggattttcacttgggctattggcgatgtttttattggttcttggtcaaatggccttgt |
44474411 |
T |
|
| Q |
184 |
acatggatatggagtttatagattttcaaatgggaatgtctacgcaggaaattttaaaaatgataaaatggacggaagagggattatgaattgg |
277 |
Q |
| |
|
|||||||| |||||||| || || | | ||||| |||||||||| ||||||| |||| | ||| |||| |||||||||| | |||||||| |
|
|
| T |
44474412 |
acatggatttggagtttttacatctctagatggggatgtctacgctggaaattggaaaacagggaaattggatggaagagggaatttgaattgg |
44474505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 65; Significance: 3e-28; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 77 - 277
Target Start/End: Complemental strand, 7046096 - 7045896
Alignment:
| Q |
77 |
ggggatgtctacattggtaattggaaaaatgataaaatggatggaagagggattatgaattgggttaatggtgatgttttcgatggatgttggtcaaatg |
176 |
Q |
| |
|
||||||||||||| ||| ||||||||||||| |||||||||||| ||||||| | ||||||||||||||||| ||| ||||| || |||||||| |
|
|
| T |
7046096 |
ggggatgtctacactggatattggaaaaatgagaaaatggatggagaagggattttatattgggttaatggtgatagttttgatggttgcctgtcaaatg |
7045997 |
T |
|
| Q |
177 |
gacatagacatggatatggagtttatagattttcaaatgggaatgtctacgcaggaaattttaaaaatgataaaatggacggaagagggattatgaattg |
276 |
Q |
| |
|
||| ||| |||||| ||||||||||| |||| |||||| ||||||||| |||||||| ||| | || |||||||| ||||||||||| |||| ||| |
|
|
| T |
7045996 |
gactcagagatggatttggagtttataaatttagaaatggtgatgtctacggaggaaattggaaagaagagaaaatggatggaagagggatcatgagttg |
7045897 |
T |
|
| Q |
277 |
g |
277 |
Q |
| |
|
| |
|
|
| T |
7045896 |
g |
7045896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 7045976 - 7045829
Alignment:
| Q |
59 |
gtttatagatttgcaaatggggatgtctacattggtaattggaaaaatgataaaatggatggaagagggattatgaattgggttaatggtgatgttttcg |
158 |
Q |
| |
|
||||||| |||| |||||| ||||||||| || ||||||||| | || |||||||||||||||||||| |||| ||||||||||| |||||||| |
|
|
| T |
7045976 |
gtttataaatttagaaatggtgatgtctacggaggaaattggaaagaagagaaaatggatggaagagggatcatgagttgggttaatgttgatgttt--- |
7045880 |
T |
|
| Q |
159 |
atggatgttggtcaaatggacatagacatggatatggagtttatagattttcaaatgg |
216 |
Q |
| |
|
|||||||||||||| || ||||||||||||||||| || |||| ||||||| |
|
|
| T |
7045879 |
-------ttggtcaaatggacttatacatggatatggagtttttacatttgcaaatgg |
7045829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 156
Target Start/End: Complemental strand, 7046226 - 7046155
Alignment:
| Q |
85 |
ctacattggtaattggaaaaatgataaaatggatggaagagggattatgaattgggttaatggtgatgtttt |
156 |
Q |
| |
|
|||| |||| ||||||||||| |||||||||||||||| ||||||| ||| ||||| |||||||||| |||| |
|
|
| T |
7046226 |
ctacgttggaaattggaaaaaagataaaatggatggaaaagggattgtgagttgggctaatggtgatttttt |
7046155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 14905006 - 14904961
Alignment:
| Q |
13 |
aatatacgagggtgactgggttgatggaaaaatgacagggaaaggg |
58 |
Q |
| |
|
|||||| ||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
14905006 |
aatatatgagggtgactgggttgatggaaaaaagacagggaaaggg |
14904961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 34; Significance: 0.000000001; HSPs: 8)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 32714093 - 32714138
Alignment:
| Q |
13 |
aatatacgagggtgactgggttgatggaaaaatgacagggaaaggg |
58 |
Q |
| |
|
|||||| |||||||| |||||||||||||||| ||||||||||||| |
|
|
| T |
32714093 |
aatatatgagggtgattgggttgatggaaaaaggacagggaaaggg |
32714138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 32716507 - 32716552
Alignment:
| Q |
13 |
aatatacgagggtgactgggttgatggaaaaatgacagggaaaggg |
58 |
Q |
| |
|
|||||| |||||||| |||||||||||||||| ||||||||||||| |
|
|
| T |
32716507 |
aatatatgagggtgattgggttgatggaaaaaggacagggaaaggg |
32716552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 32716714 - 32716759
Alignment:
| Q |
13 |
aatatacgagggtgactgggttgatggaaaaatgacagggaaaggg |
58 |
Q |
| |
|
|||||| |||||||| |||||||||||||||| ||||||||||||| |
|
|
| T |
32716714 |
aatatatgagggtgattgggttgatggaaaaaggacagggaaaggg |
32716759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 32717128 - 32717172
Alignment:
| Q |
13 |
aatatacgagggtgactgggttgatggaaaaatgacagggaaagg |
57 |
Q |
| |
|
||||||||||||||| ||||||||||||| |||||| |||||||| |
|
|
| T |
32717128 |
aatatacgagggtgattgggttgatggaagaatgactgggaaagg |
32717172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 32717335 - 32717379
Alignment:
| Q |
13 |
aatatacgagggtgactgggttgatggaaaaatgacagggaaagg |
57 |
Q |
| |
|
||||||||||||||| ||||||||||||| || |||||||||||| |
|
|
| T |
32717335 |
aatatacgagggtgattgggttgatggaagaaggacagggaaagg |
32717379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 275 - 330
Target Start/End: Original strand, 32714079 - 32714134
Alignment:
| Q |
275 |
tggtcaaatggaacaatgtacgagggcgattgggttgatggacaaatgatagggaa |
330 |
Q |
| |
|
||||||||||||||||| || ||||| ||||||||||||||| ||| || |||||| |
|
|
| T |
32714079 |
tggtcaaatggaacaatatatgagggtgattgggttgatggaaaaaggacagggaa |
32714134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 275 - 330
Target Start/End: Original strand, 32716493 - 32716548
Alignment:
| Q |
275 |
tggtcaaatggaacaatgtacgagggcgattgggttgatggacaaatgatagggaa |
330 |
Q |
| |
|
||||||||||||||||| || ||||| ||||||||||||||| ||| || |||||| |
|
|
| T |
32716493 |
tggtcaaatggaacaatatatgagggtgattgggttgatggaaaaaggacagggaa |
32716548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 32716921 - 32716966
Alignment:
| Q |
13 |
aatatacgagggtgactgggttgatggaaaaatgacagggaaaggg |
58 |
Q |
| |
|
||||||||| ||||| ||||||||||||| || ||||||||||||| |
|
|
| T |
32716921 |
aatatacgatggtgattgggttgatggaagaaggacagggaaaggg |
32716966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 275 - 330
Target Start/End: Original strand, 2998210 - 2998265
Alignment:
| Q |
275 |
tggtcaaatggaacaatgtacgagggcgattgggttgatggacaaatgatagggaa |
330 |
Q |
| |
|
||||||||||||||||| || ||||| ||||||||||||| ||||| || |||||| |
|
|
| T |
2998210 |
tggtcaaatggaacaatatatgagggtgattgggttgatgaacaaaggacagggaa |
2998265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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