View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19555_low_55 (Length: 284)
Name: NF19555_low_55
Description: NF19555
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19555_low_55 |
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Alignment Details
Target: chr4 (Bit Score: 157; Significance: 2e-83; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 103 - 263
Target Start/End: Original strand, 36448120 - 36448280
Alignment:
| Q |
103 |
ccaaagcaagttagtggagataacattatttaacaaaggacattatcgtccatagataaaccacaagaaacaatcccttacacaaacatggaacaatggc |
202 |
Q |
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| T |
36448120 |
ccaaagcaagttagtggagataacattatttaacaaaggacattatcgtccatagataaaccacaagaaacaatcccttacacaaacatggaacaatggc |
36448219 |
T |
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| Q |
203 |
ggaactgaagtaaactagatagaaatcacaacctccatttccaaaaacctcataaacccac |
263 |
Q |
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| T |
36448220 |
ggaactgaagtaaactagatagaaatcacaacctccatttccataaacctcataaacccac |
36448280 |
T |
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