View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19555_low_70 (Length: 239)
Name: NF19555_low_70
Description: NF19555
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19555_low_70 |
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Alignment Details
Target: chr7 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 45069786 - 45070011
Alignment:
| Q |
1 |
atattaggaataatcaattttgactatcactttttcacaagagaaaaaagtgttaacgaagactcattatcaagatcaagatatattacattttctgagc |
100 |
Q |
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||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45069786 |
atattaggaataaacaattttgactatcactttttcacaaaagaaaaaagtgttaacgaagactcattatcaagatcaagatatattacattttctgagc |
45069885 |
T |
|
| Q |
101 |
ttatctctggcagtctgttttcta-----actatcaagattaaaagttatcaaaggataaataataccctgaatataaaagtgaggcacataaattaaga |
195 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45069886 |
ttatctctggcagtctgttttctaactatactatcaagattaaaagttatcaaaggataaataataccctgaatataaaagtgaggcacataaattaaga |
45069985 |
T |
|
| Q |
196 |
aaggatagtagtacaccccatctacc |
221 |
Q |
| |
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|||||||||||||||||||||||||| |
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| T |
45069986 |
aaggatagtagtacaccccatctacc |
45070011 |
T |
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