View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19556_low_22 (Length: 319)

Name: NF19556_low_22
Description: NF19556
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19556_low_22
NF19556_low_22
[»] chr4 (41 HSPs)
chr4 (86-303)||(10167423-10167639)
chr4 (86-199)||(10168788-10168901)
chr4 (80-198)||(54866637-54866754)
chr4 (82-199)||(13165490-13165606)
chr4 (83-200)||(23203957-23204074)
chr4 (86-197)||(33231387-33231498)
chr4 (90-201)||(50546908-50547019)
chr4 (89-199)||(7707589-7707699)
chr4 (86-200)||(23201844-23201958)
chr4 (81-200)||(7708792-7708913)
chr4 (84-209)||(50548218-50548339)
chr4 (86-169)||(4714017-4714100)
chr4 (92-198)||(54865109-54865214)
chr4 (90-213)||(53204363-53204486)
chr4 (116-198)||(33232703-33232785)
chr4 (86-197)||(52241162-52241273)
chr4 (113-199)||(2310948-2311034)
chr4 (102-203)||(1831264-1831365)
chr4 (114-199)||(53205488-53205573)
chr4 (84-201)||(53432058-53432175)
chr4 (86-198)||(2312488-2312600)
chr4 (114-201)||(4871367-4871454)
chr4 (113-200)||(40792776-40792863)
chr4 (104-199)||(42810208-42810303)
chr4 (80-200)||(393642-393762)
chr4 (114-197)||(1829779-1829862)
chr4 (114-197)||(11968537-11968620)
chr4 (83-210)||(44501513-44501640)
chr4 (101-199)||(390230-390328)
chr4 (114-200)||(1188869-1188955)
chr4 (114-200)||(4129019-4129105)
chr4 (113-199)||(42871120-42871206)
chr4 (101-210)||(1190186-1190295)
chr4 (114-198)||(37882860-37882944)
chr4 (86-197)||(1588096-1588207)
chr4 (114-197)||(6348181-6348264)
chr4 (100-199)||(53435758-53435857)
chr4 (114-152)||(6349605-6349643)
chr4 (114-152)||(27850984-27851022)
chr4 (124-210)||(42872293-42872379)
chr4 (83-136)||(13531140-13531193)
[»] chr2 (33 HSPs)
chr2 (87-254)||(34468957-34469124)
chr2 (86-200)||(29219383-29219497)
chr2 (86-200)||(29332682-29332796)
chr2 (81-209)||(44192441-44192569)
chr2 (86-213)||(6030603-6030729)
chr2 (81-200)||(18617010-18617129)
chr2 (84-200)||(29220880-29220996)
chr2 (84-200)||(29334179-29334295)
chr2 (86-198)||(1085394-1085504)
chr2 (87-200)||(18615515-18615628)
chr2 (80-200)||(1082980-1083100)
chr2 (82-199)||(6032319-6032436)
chr2 (85-201)||(44191133-44191249)
chr2 (80-200)||(32470579-32470699)
chr2 (80-199)||(249016-249135)
chr2 (86-199)||(12359684-12359797)
chr2 (101-200)||(11315946-11316045)
chr2 (82-200)||(17460688-17460806)
chr2 (86-197)||(17459251-17459362)
chr2 (105-199)||(43033099-43033193)
chr2 (77-199)||(28562814-28562936)
chr2 (81-215)||(33995941-33996074)
chr2 (83-152)||(35903503-35903572)
chr2 (157-210)||(36011636-36011689)
chr2 (86-169)||(35061351-35061433)
chr2 (54-84)||(6231946-6231976)
chr2 (114-152)||(7437813-7437851)
chr2 (101-199)||(11547672-11547770)
chr2 (100-198)||(34512826-34512924)
chr2 (101-197)||(21664816-21664911)
chr2 (80-136)||(36010569-36010625)
chr2 (100-152)||(37956961-37957013)
chr2 (114-198)||(43034477-43034561)
[»] chr6 (24 HSPs)
chr6 (100-254)||(2687242-2687396)
chr6 (86-200)||(17839143-17839257)
chr6 (83-198)||(6701375-6701490)
chr6 (80-199)||(17837608-17837727)
chr6 (86-200)||(23397358-23397472)
chr6 (86-199)||(2687929-2688042)
chr6 (85-199)||(6702876-6702989)
chr6 (81-199)||(23392207-23392325)
chr6 (84-200)||(29380187-29380303)
chr6 (86-199)||(5187627-5187740)
chr6 (86-199)||(29381735-29381848)
chr6 (89-198)||(29722664-29722773)
chr6 (86-199)||(32507031-32507144)
chr6 (80-200)||(5186560-5186680)
chr6 (86-199)||(18346755-18346868)
chr6 (86-171)||(12256617-12256702)
chr6 (77-200)||(232165-232286)
chr6 (86-199)||(6452516-6452629)
chr6 (94-151)||(12256557-12256614)
chr6 (86-177)||(233591-233682)
chr6 (114-199)||(6452310-6452395)
chr6 (105-213)||(27080941-27081049)
chr6 (86-153)||(15730081-15730148)
chr6 (114-152)||(34023912-34023950)
[»] chr1 (26 HSPs)
chr1 (81-200)||(15234045-15234164)
chr1 (86-200)||(49802899-49803013)
chr1 (86-198)||(15232750-15232862)
chr1 (86-197)||(16963832-16963943)
chr1 (80-199)||(49801609-49801728)
chr1 (103-197)||(16965134-16965228)
chr1 (114-201)||(16123313-16123400)
chr1 (101-197)||(51042350-51042445)
chr1 (101-223)||(15071355-15071477)
chr1 (113-210)||(44278343-44278440)
chr1 (85-198)||(52628879-52628992)
chr1 (113-199)||(15072795-15072881)
chr1 (101-199)||(24499660-24499758)
chr1 (123-199)||(30535674-30535750)
chr1 (102-200)||(46111492-46111590)
chr1 (114-199)||(14470882-14470967)
chr1 (113-201)||(46467171-46467259)
chr1 (86-201)||(23091349-23091464)
chr1 (138-201)||(44999465-44999527)
chr1 (114-153)||(52627541-52627580)
chr1 (85-199)||(14477796-14477910)
chr1 (82-152)||(42244625-42244695)
chr1 (86-152)||(42245939-42246005)
chr1 (114-199)||(45585014-45585099)
chr1 (114-199)||(50444703-50444788)
chr1 (104-152)||(34352008-34352056)
[»] chr8 (32 HSPs)
chr8 (86-198)||(17338039-17338151)
chr8 (86-200)||(13116328-13116442)
chr8 (86-200)||(13117637-13117751)
chr8 (86-200)||(42100110-42100224)
chr8 (86-199)||(17339554-17339667)
chr8 (86-199)||(42098561-42098674)
chr8 (87-213)||(211594-211720)
chr8 (87-213)||(240536-240662)
chr8 (87-213)||(725217-725343)
chr8 (87-213)||(793891-794017)
chr8 (86-198)||(28420180-28420292)
chr8 (114-198)||(6397809-6397893)
chr8 (84-213)||(8570114-8570243)
chr8 (82-195)||(32797132-32797245)
chr8 (114-199)||(32798537-32798622)
chr8 (86-198)||(28418804-28418916)
chr8 (124-198)||(6398503-6398577)
chr8 (102-210)||(26696546-26696654)
chr8 (81-198)||(212718-212835)
chr8 (81-198)||(239419-239536)
chr8 (81-198)||(726341-726458)
chr8 (81-198)||(792774-792891)
chr8 (81-198)||(798842-798959)
chr8 (113-200)||(32693855-32693942)
chr8 (113-198)||(14840905-14840990)
chr8 (81-201)||(8571620-8571740)
chr8 (84-171)||(23702953-23703040)
chr8 (114-169)||(42870839-42870894)
chr8 (86-201)||(45437485-45437600)
chr8 (14-81)||(32099937-32100004)
chr8 (114-200)||(45281193-45281278)
chr8 (86-171)||(23708782-23708867)
[»] chr7 (44 HSPs)
chr7 (85-198)||(22538854-22538967)
chr7 (85-200)||(22335976-22336091)
chr7 (86-200)||(13564243-13564357)
chr7 (80-201)||(3413524-3413645)
chr7 (86-200)||(13562820-13562934)
chr7 (84-213)||(3414825-3414954)
chr7 (83-200)||(11501175-11501292)
chr7 (86-200)||(40812617-40812731)
chr7 (86-199)||(22337376-22337488)
chr7 (82-213)||(40738829-40738961)
chr7 (86-200)||(11502426-11502540)
chr7 (89-199)||(24844262-24844372)
chr7 (81-199)||(22537552-22537670)
chr7 (85-198)||(43459452-43459565)
chr7 (114-210)||(32602959-32603055)
chr7 (89-203)||(24281075-24281190)
chr7 (97-155)||(24844399-24844457)
chr7 (114-199)||(24282981-24283065)
chr7 (101-198)||(30333298-30333395)
chr7 (102-199)||(45454052-45454149)
chr7 (105-192)||(534078-534165)
chr7 (105-192)||(537331-537418)
chr7 (114-198)||(4300054-4300138)
chr7 (104-200)||(30310137-30310233)
chr7 (102-198)||(45455378-45455474)
chr7 (80-199)||(47059100-47059219)
chr7 (81-200)||(47454330-47454449)
chr7 (114-198)||(11344533-11344614)
chr7 (83-200)||(32254984-32255101)
chr7 (114-199)||(40508404-40508489)
chr7 (114-170)||(33779118-33779174)
chr7 (114-198)||(40509740-40509824)
chr7 (123-199)||(43460828-43460904)
chr7 (114-198)||(47456381-47456465)
chr7 (84-199)||(30311474-30311589)
chr7 (114-152)||(22115216-22115254)
chr7 (86-152)||(30334689-30334755)
chr7 (77-215)||(35664270-35664408)
chr7 (86-152)||(38539669-38539735)
chr7 (83-136)||(9660116-9660169)
chr7 (114-199)||(33096895-33096980)
chr7 (80-153)||(41078748-41078821)
chr7 (100-152)||(25533200-25533252)
chr7 (85-197)||(32256402-32256514)
[»] chr5 (23 HSPs)
chr5 (86-198)||(30910739-30910851)
chr5 (84-200)||(30912166-30912282)
chr5 (86-199)||(33173965-33174078)
chr5 (86-199)||(22308804-22308917)
chr5 (81-213)||(22307501-22307633)
chr5 (102-199)||(22047746-22047843)
chr5 (113-199)||(39605474-39605560)
chr5 (114-198)||(39603879-39603963)
chr5 (114-200)||(325189-325275)
chr5 (114-195)||(30859181-30859262)
chr5 (100-200)||(8521267-8521367)
chr5 (81-201)||(22049139-22049259)
chr5 (86-200)||(1010368-1010482)
chr5 (113-198)||(30857825-30857910)
chr5 (86-215)||(34894147-34894276)
chr5 (84-152)||(9169582-9169650)
chr5 (114-197)||(27705323-27705406)
chr5 (86-152)||(8523798-8523864)
chr5 (86-131)||(15941409-15941454)
chr5 (100-153)||(20538065-20538118)
chr5 (84-152)||(1009180-1009248)
chr5 (139-199)||(33172604-33172664)
chr5 (86-153)||(34899002-34899069)
[»] chr3 (39 HSPs)
chr3 (89-199)||(27837921-27838031)
chr3 (86-199)||(53614278-53614391)
chr3 (77-197)||(26887562-26887682)
chr3 (86-194)||(35370911-35371019)
chr3 (80-199)||(35372163-35372285)
chr3 (86-197)||(10732136-10732247)
chr3 (81-200)||(53612864-53612983)
chr3 (86-200)||(41263636-41263750)
chr3 (84-198)||(41264659-41264773)
chr3 (81-200)||(10730878-10730997)
chr3 (86-199)||(26886270-26886383)
chr3 (83-211)||(3817256-3817384)
chr3 (86-213)||(42686136-42686263)
chr3 (114-198)||(18458663-18458747)
chr3 (86-198)||(50810840-50810952)
chr3 (86-198)||(50864912-50865024)
chr3 (80-210)||(37735298-37735428)
chr3 (82-171)||(3811521-3811610)
chr3 (104-196)||(37736089-37736181)
chr3 (86-198)||(50809419-50809531)
chr3 (86-198)||(50866331-50866443)
chr3 (80-201)||(53420311-53420429)
chr3 (86-195)||(40244185-40244294)
chr3 (86-200)||(38240904-38241018)
chr3 (114-199)||(18197173-18197258)
chr3 (114-199)||(40364345-40364430)
chr3 (113-213)||(53421752-53421852)
chr3 (113-200)||(34818111-34818198)
chr3 (113-152)||(36176559-36176598)
chr3 (114-199)||(42684902-42684987)
chr3 (13-85)||(51990461-51990534)
chr3 (124-199)||(3208520-3208595)
chr3 (114-177)||(18442278-18442341)
chr3 (114-177)||(19487352-19487415)
chr3 (131-197)||(27841717-27841783)
chr3 (14-85)||(51952083-51952154)
chr3 (101-210)||(41544675-41544784)
chr3 (114-199)||(53194875-53194960)
chr3 (104-152)||(12108035-12108083)
[»] scaffold0019 (2 HSPs)
scaffold0019 (86-213)||(61849-61976)
scaffold0019 (80-201)||(63134-63255)
[»] scaffold0472 (1 HSPs)
scaffold0472 (89-199)||(750-858)
[»] scaffold0078 (1 HSPs)
scaffold0078 (114-210)||(18838-18934)
[»] scaffold0077 (2 HSPs)
scaffold0077 (86-198)||(54191-54303)
scaffold0077 (113-200)||(52617-52704)
[»] scaffold0031 (2 HSPs)
scaffold0031 (80-199)||(123961-124080)
scaffold0031 (114-199)||(125238-125323)
[»] scaffold0011 (2 HSPs)
scaffold0011 (86-201)||(127431-127546)
scaffold0011 (86-210)||(128585-128709)
[»] scaffold1152 (1 HSPs)
scaffold1152 (86-153)||(2527-2593)
[»] scaffold0034 (1 HSPs)
scaffold0034 (102-152)||(109797-109847)


Alignment Details
Target: chr4 (Bit Score: 155; Significance: 3e-82; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 86 - 303
Target Start/End: Original strand, 10167423 - 10167639
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||    
T  10167423 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaattgcattttagtccctcatattttcctccgtt 10167522  T
Q  186 tgtcaaataaatcccttccgtcaaataaatctcttttctattagtagcccatgtggcaagtataaaaaaggannnnnnnnnnagaaacctagcattatgg 285  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||| |          ||||||||||||||||||    
T  10167523 tgtcaaataaatcccttccgtcaaataaatctcttttccgttagtagcccacgtggcaagtataaaaaagca-tttttttttagaaacctagcattatgg 10167621  T
Q  286 ttcctcatcttcaacctg 303  Q
    ||||||||||||||||||    
T  10167622 ttcctcatcttcaacctg 10167639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 86 - 199
Target Start/End: Complemental strand, 10168901 - 10168788
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||    
T  10168901 ggcttattagatcgtttggtccattatttaatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcacattttcctccgtt 10168802  T
Q  186 tgtcaaataaatcc 199  Q
    || |||||||||||    
T  10168801 tgccaaataaatcc 10168788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 80 - 198
Target Start/End: Complemental strand, 54866754 - 54866637
Alignment:
Q  80 ttttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttac 179  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||| |  |||| |    
T  54866754 ttttttggcttattagatcgtttggtcccttatttaatttcatattttcattttggt-ccacaattaataaaaatggtgttttagtcccttacgttttcc 54866656  T
Q  180 tccgtttgtcaaataaatc 198  Q
    |||||||| ||||||||||    
T  54866655 tccgtttgccaaataaatc 54866637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 82 - 199
Target Start/End: Original strand, 13165490 - 13165606
Alignment:
Q  82 ttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactc 181  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||  ||||||||||||||||||||| |||| |||| |||| |||    
T  13165490 ttttggcttattagatcgtttggtccattatttaatttcatgttttcattttggt-ccctaattaataaaaatggcgttttcgtccttcatcttttcctc 13165588  T
Q  182 cgtttgtcaaataaatcc 199  Q
    ||||||||||||||||||    
T  13165589 cgtttgtcaaataaatcc 13165606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 83 - 200
Target Start/End: Complemental strand, 23204074 - 23203957
Alignment:
Q  83 tttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactcc 182  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||| |||| |||| |||| ||||    
T  23204074 tttggcttattagatcgtttggtcccttatttaatttcatattttcattttggtcccacatttaataaaaatggcgttttggtccgtcatctttttctcc 23203975  T
Q  183 gtttgtcaaataaatccc 200  Q
    ||||| ||| ||||||||    
T  23203974 gtttgccaattaaatccc 23203957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 86 - 197
Target Start/End: Original strand, 33231387 - 33231498
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| |||| | |||||    
T  33231387 ggcttattagatcatttggtcccttatttaatttcatgttttcattttagtcccacaattaataaaaatggtgttttagtccctcatctttttcaccgtt 33231486  T
Q  186 tgtcaaataaat 197  Q
    || |||||||||    
T  33231487 tgccaaataaat 33231498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 90 - 201
Target Start/End: Original strand, 50546908 - 50547019
Alignment:
Q  90 tattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtc 189  Q
    ||||||||| ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||| |||| | ||||||| |    
T  50546908 tattagatcatttggtcccttatttaatttcatgtcttcattttagtcccacaattaataaaaatggcgttttagtccctcatcttttccaccgtttgcc 50547007  T
Q  190 aaataaatccct 201  Q
    ||||||||||||    
T  50547008 aaataaatccct 50547019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 89 - 199
Target Start/End: Original strand, 7707589 - 7707699
Alignment:
Q  89 ttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgt 188  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||| ||||| ||| |||||     
T  7707589 ttattagatcttttagtcccttatttaatttcatgttttcattttggtcccacaattaataaaaatgacgttttagtccatcacattttcctctgtttgc 7707688  T
Q  189 caaataaatcc 199  Q
    |||||||||||    
T  7707689 caaataaatcc 7707699  T

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Target: chr4; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 86 - 200
Target Start/End: Original strand, 23201844 - 23201958
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||| |||| ||||||||  |||| |||||||    
T  23201844 ggcttattagattgtttggtcccttatttaatttcatgtttttattttggtcccacatttaataaaaatggcattttggtccctcaccttttcctccgtt 23201943  T
Q  186 tgtcaaataaatccc 200  Q
    || ||||||||||||    
T  23201944 tgccaaataaatccc 23201958  T

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Target: chr4; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 81 - 200
Target Start/End: Complemental strand, 7708913 - 7708792
Alignment:
Q  81 tttttggcttattagatcgtttggtcccttatttaatttcatgt--tttcattttggtaccacaattaataaaaatggcgttttagtccctcatatttta 178  Q
    |||| |||||||||||||||||||||||||||||||||| ||||  |||||||||||| | ||||||||||||| ||||||||||||||||||  ||||     
T  7708913 ttttaggcttattagatcgtttggtcccttatttaattttatgtgttttcattttggttctacaattaataaaagtggcgttttagtccctcaccttttt 7708814  T
Q  179 ctccgtttgtcaaataaatccc 200  Q
    ||| ||||| ||||||||||||    
T  7708813 ctctgtttgccaaataaatccc 7708792  T

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Target: chr4; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 84 - 209
Target Start/End: Complemental strand, 50548339 - 50548218
Alignment:
Q  84 ttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccg 183  Q
    |||| ||||||||||||||||||||||||||    |||||||||||||||||| ||||||||||||| |||  ||||||||||||||| ||||| ||| |    
T  50548339 ttggtttattagatcgtttggtcccttattt----tcatgttttcattttggtcccacaattaataagaataacgttttagtccctcacattttcctctg 50548244  T
Q  184 tttgtcaaataaatcccttccgtcaa 209  Q
    |||| ||||||||||| |||||||||    
T  50548243 tttgccaaataaatcctttccgtcaa 50548218  T

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Target: chr4; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 86 - 169
Target Start/End: Original strand, 4714017 - 4714100
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccct 169  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||| |||||    
T  4714017 ggcttattagatcgtttggtcccttatttaatttcatatttttattttggtcccacaattaataaaaatggcgttttaatccct 4714100  T

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Target: chr4; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 92 - 198
Target Start/End: Original strand, 54865109 - 54865214
Alignment:
Q  92 ttagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaa 191  Q
    |||||| ||||||||||||||||||||| |||||||||||||||| ||| ||||||| ||||| | |||||||||||||| ||||| |||||||||||||    
T  54865109 ttagattgtttggtcccttatttaattttatgttttcattttggtcccataattaat-aaaattgtgttttagtccctcacattttcctccgtttgtcaa 54865207  T
Q  192 ataaatc 198  Q
    |||||||    
T  54865208 ataaatc 54865214  T

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Target: chr4; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 90 - 213
Target Start/End: Original strand, 53204363 - 53204486
Alignment:
Q  90 tattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtc 189  Q
    ||||||||| |||| |||||||  |||||| |||||||||||||| |  ||||||||||||||  ||||||||||| |||||  |||| ||||||||| |    
T  53204363 tattagatcatttgatcccttaaataatttaatgttttcattttgatctcacaattaataaaacaggcgttttagttcctcaattttttctccgtttgcc 53204462  T
Q  190 aaataaatcccttccgtcaaataa 213  Q
    |||||||||||||| |||||||||    
T  53204463 aaataaatcccttctgtcaaataa 53204486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 116 - 198
Target Start/End: Complemental strand, 33232785 - 33232703
Alignment:
Q  116 atttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatc 198  Q
    ||||||| |||| |||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||    
T  33232785 atttcatatttttattttggtcccacaattaataaaaatggcgttttagtccctcacattttcctccgtttgccaaataaatc 33232703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 86 - 197
Target Start/End: Complemental strand, 52241273 - 52241162
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    |||| |||| |||||||| |||||||||||||||||||||||||||||| | |||||||||||||||    ||||||  | |||||| |||| |||||||    
T  52241273 ggctcattacatcgtttgatcccttatttaatttcatgttttcattttgattccacaattaataaaacgtacgttttgattcctcatcttttcctccgtt 52241174  T
Q  186 tgtcaaataaat 197  Q
    || |||||||||    
T  52241173 tgccaaataaat 52241162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 113 - 199
Target Start/End: Original strand, 2310948 - 2311034
Alignment:
Q  113 ttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatcc 199  Q
    ||||||||| |||||||||||||| |||||||||||||||    |||||| |||||||| ||||| ||||| ||| |||||||||||    
T  2310948 ttaatttcaagttttcattttggtcccacaattaataaaacgtacgttttggtccctcagattttcctccgattgccaaataaatcc 2311034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 102 - 203
Target Start/End: Complemental strand, 1831365 - 1831264
Alignment:
Q  102 tggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatccct 201  Q
    |||||||| | ||||||||| ||||||||||| || |||||||||||||||    | |||| ||||||||| |||| |||| ||| ||||||||||||||    
T  1831365 tggtccctcaattaatttcaagttttcattttagtcccacaattaataaaacgtacattttggtccctcattttttcctccatttttcaaataaatccct 1831266  T
Q  202 tc 203  Q
    ||    
T  1831265 tc 1831264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 114 - 199
Target Start/End: Complemental strand, 53205573 - 53205488
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatcc 199  Q
    ||||||||  |||||||||| || |||||||||| ||||  |||||||||||||||||  |||| ||||||||| |||||||||||    
T  53205573 taatttcagattttcattttcgtcccacaattaaaaaaataggcgttttagtccctcactttttcctccgtttgccaaataaatcc 53205488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 84 - 201
Target Start/End: Original strand, 53432058 - 53432175
Alignment:
Q  84 ttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccg 183  Q
    |||||||| ||| ||||||| ||||||| ||||||||| |||||||||||||| ||| || |||||||| |   ||||| ||||||||  |||  || ||    
T  53432058 ttggcttaataggtcgtttgatcccttaattaatttcaagttttcattttggtcccataagtaataaaacttatgttttggtccctcaagtttgccttcg 53432157  T
Q  184 tttgtcaaataaatccct 201  Q
    || |||||||||||||||    
T  53432158 ttggtcaaataaatccct 53432175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 198
Target Start/End: Complemental strand, 2312600 - 2312488
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    |||||||| ||||  |||||||||||  |||||||| |||| |||||| || |||||||||||||||    ||||| |||||||||  |||| |||||||    
T  2312600 ggcttatttgatccattggtcccttagataatttcaagtttccattttagtcccacaattaataaaacgtacgtttaagtccctcactttttcctccgtt 2312501  T
Q  186 tgtcaaataaatc 198  Q
    || ||||||||||    
T  2312500 tgccaaataaatc 2312488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 201
Target Start/End: Complemental strand, 4871454 - 4871367
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatccct 201  Q
    ||||||||||||||||||||||| | |||||||||||||     |||| |||||| ||  |||| |||||||||||||||||||||||    
T  4871454 taatttcatgttttcattttggttctacaattaataaaacgtatgtttaagtcccccacgtttttctccgtttgtcaaataaatccct 4871367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 113 - 200
Target Start/End: Original strand, 40792776 - 40792863
Alignment:
Q  113 ttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatccc 200  Q
    ||||||| | |||||||||||||| |||||||||||||||    | |||| |||||||| ||||| ||||||||| ||||||||||||    
T  40792776 ttaattttaagttttcattttggtcccacaattaataaaacatacattttggtccctcagatttttctccgtttgccaaataaatccc 40792863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 199
Target Start/End: Complemental strand, 42810303 - 42810208
Alignment:
Q  104 gtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatcc 199  Q
    ||||||||  ||||||||  ||||||||||||| |||||||||||||||    | ||| ||||||||| ||||| ||||||||| |||||||||||    
T  42810303 gtcccttaaataatttcaacttttcattttggtcccacaattaataaaacgtacttttaagtccctcacattttcctccgtttgccaaataaatcc 42810208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 80 - 200
Target Start/End: Complemental strand, 393762 - 393642
Alignment:
Q  80 ttttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttac 179  Q
    |||||||||||||| ||||    ||||||| |  ||||||||  ||||||||||||| ||||||||||||||||     |||| ||||||||  |||| |    
T  393762 ttttttggcttatttgatccaacggtccctcaaataatttcaaattttcattttggtcccacaattaataaaaagtatcttttggtccctcacttttttc 393663  T
Q  180 tccgtttgtcaaataaatccc 200  Q
    |||||||| ||||||||||||    
T  393662 tccgtttgccaaataaatccc 393642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 197
Target Start/End: Original strand, 1829779 - 1829862
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaat 197  Q
    |||||||| |||||||||||||| |||||||||||||||      |||||||||||||  |||| || ||||||||||||||||    
T  1829779 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttagtccctcactttttcctacgtttgtcaaataaat 1829862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 197
Target Start/End: Original strand, 11968537 - 11968620
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaat 197  Q
    |||||||| ||||||||||||||  ||||||||||||||    | |||| |||||||| ||||| |||||||||| ||||||||    
T  11968537 taatttcaagttttcattttggtctcacaattaataaaacatactttttggtccctcagattttgctccgtttgtaaaataaat 11968620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 210
Target Start/End: Original strand, 44501513 - 44501640
Alignment:
Q  83 tttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactcc 182  Q
    ||||||||||| || |  ||||||||| |  |||||||| ||||||||| |||| ||| |||||||||||    ||||| |||||||||  |||| |||     
T  44501513 tttggcttatttgaaccattggtccctcaaataatttcaagttttcattctggtcccataattaataaaacgtacgtttaagtccctcacttttttctct 44501612  T
Q  183 gtttgtcaaataaatcccttccgtcaaa 210  Q
    ||||| |||||||||| | |||||||||    
T  44501613 gtttgccaaataaatctcatccgtcaaa 44501640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 199
Target Start/End: Original strand, 390230 - 390328
Alignment:
Q  101 ttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatcc 199  Q
    |||||||| ||  |||||||| |||||||||||||| |||||||||||||||      |||| ||||||||| | || ||||||||| |||||||||||    
T  390230 ttggtcccctaaataatttcaagttttcattttggtcccacaattaataaaacgtatattttggtccctcatttcttcctccgtttgccaaataaatcc 390328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 200
Target Start/End: Original strand, 1188869 - 1188955
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatccc 200  Q
    |||||||| ||||| |||||||| |||||||||||||||    | |||| ||||||||  |||| ||||||||| ||||||||||||    
T  1188869 taatttcaagtttttattttggtcccacaattaataaaacgtacattttggtccctcactttttcctccgtttgccaaataaatccc 1188955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 200
Target Start/End: Original strand, 4129019 - 4129105
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatccc 200  Q
    |||||||| |||||||||||||| |||||||||||||||    | |||| |||||| |  |||| ||||||||| ||||||||||||    
T  4129019 taatttcaagttttcattttggtcccacaattaataaaatgtacattttggtcccttacttttttctccgtttgccaaataaatccc 4129105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 199
Target Start/End: Original strand, 42871120 - 42871206
Alignment:
Q  113 ttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatcc 199  Q
    |||||||||  ||||||||||| | |||||||||||||||    |||||| ||||||||  |||| ||||||||| |||||||||||    
T  42871120 ttaatttcaaattttcattttgatcccacaattaataaaacgtacgttttggtccctcactttttcctccgtttgccaaataaatcc 42871206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 101 - 210
Target Start/End: Complemental strand, 1190295 - 1190186
Alignment:
Q  101 ttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatccc 200  Q
    ||||||||| |  |||||| | |||||||||||||| ||| |||||||||||    ||||| ||| |||||  |||| ||| ||||| ||||||||||||    
T  1190295 ttggtccctcaaataattttaagttttcattttggtcccataattaataaaacgtacgtttaagtacctcacttttttctctgtttgccaaataaatccc 1190196  T
Q  201 ttccgtcaaa 210  Q
     |||||||||    
T  1190195 atccgtcaaa 1190186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 198
Target Start/End: Original strand, 37882860 - 37882944
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatc 198  Q
    |||||||| ||||||||||| || |||||||||||||||    | |||| ||||||||  |||| ||||||||| ||||||||||    
T  37882860 taatttcaagttttcattttagtcccacaattaataaaacgtaccttttggtccctcaccttttcctccgtttgccaaataaatc 37882944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 197
Target Start/End: Complemental strand, 1588207 - 1588096
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    |||||||| |||| |||||||||| |  |||||| | ||||||||||| || |||||||||||||||    ||||| | |||||||  |||| |||||||    
T  1588207 ggcttatttgatcttttggtccctcaaataattttaagttttcattttagtcccacaattaataaaatgtacgtttaaatccctcactttttcctccgtt 1588108  T
Q  186 tgtcaaataaat 197  Q
    |  |||||||||    
T  1588107 taccaaataaat 1588096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 197
Target Start/End: Original strand, 6348181 - 6348264
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaat 197  Q
    |||||||| |||||||||||||| |||||||||||||||    | |||| || |||||  |||| ||| |||||||||||||||    
T  6348181 taatttcaagttttcattttggtcccacaattaataaaacgtaccttttggttcctcactttttcctctgtttgtcaaataaat 6348264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 199
Target Start/End: Complemental strand, 53435857 - 53435758
Alignment:
Q  100 tttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatcc 199  Q
    |||| ||||||| ||||||||| |||||||||||||| ||| || |||||||| |   ||||| | ||||||  |||  ||||||| |||||||||||||    
T  53435857 tttgatcccttaattaatttcaagttttcattttggtcccataagtaataaaactcatgttttggcccctcaagtttacctccgttggtcaaataaatcc 53435758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 152
Target Start/End: Complemental strand, 6349643 - 6349605
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaa 152  Q
    |||||||| |||||||||||||| |||||||||||||||    
T  6349643 taatttcaagttttcattttggtcccacaattaataaaa 6349605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 152
Target Start/End: Complemental strand, 27851022 - 27850984
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaa 152  Q
    |||||||| |||||||||||||| |||||||||||||||    
T  27851022 taatttcaagttttcattttggtcccacaattaataaaa 27850984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 210
Target Start/End: Complemental strand, 42872379 - 42872293
Alignment:
Q  124 ttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatcccttccgtcaaa 210  Q
    ||||||||||||| ||| |||||||||||    |||||| ||||||||  |||| ||||||||| ||||||| ||| ||| ||||||    
T  42872379 ttttcattttggtcccataattaataaaatgtacgttttggtccctcactttttcctccgtttgccaaataattcctttctgtcaaa 42872293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 13531140 - 13531193
Alignment:
Q  83 tttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggt 136  Q
    ||||||||| ||| || ||||| |||||| ||||||||| ||||||||||||||    
T  13531140 tttggcttaataggtcatttggacccttaattaatttcaagttttcattttggt 13531193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 112; Significance: 1e-56; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 87 - 254
Target Start/End: Original strand, 34468957 - 34469124
Alignment:
Q  87 gcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgttt 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||| |||||  || ||||    
T  34468957 gcttattagatcgtttggtcccttatttaatttcatgttttcattttggtcgcacaattaataaaaatgacgttttagtccctcacattttcttctgttt 34469056  T
Q  187 gtcaaataaatcccttccgtcaaataaatctcttttctattagtagcccatgtggcaagtataaaaaa 254  Q
    | |||||||||| ||||||||||||||||||||||||  ||||||| |||  ||||||||||||||||    
T  34469057 gccaaataaatctcttccgtcaaataaatctcttttcagttagtaggccacatggcaagtataaaaaa 34469124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 86 - 200
Target Start/End: Original strand, 29219383 - 29219497
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||| |||||||    
T  29219383 ggcttattagatcgtttggtcctttatttaatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccgtt 29219482  T
Q  186 tgtcaaataaatccc 200  Q
    || ||||||||||||    
T  29219483 tgccaaataaatccc 29219497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 86 - 200
Target Start/End: Original strand, 29332682 - 29332796
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||| |||||||    
T  29332682 ggcttattagatcgtttggtcctttatttaatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccgtt 29332781  T
Q  186 tgtcaaataaatccc 200  Q
    || ||||||||||||    
T  29332782 tgccaaataaatccc 29332796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 81 - 209
Target Start/End: Complemental strand, 44192569 - 44192441
Alignment:
Q  81 tttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttact 180  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||| ||||||||||||| ||||| ||    
T  44192569 ttttcggcttattagattgtttggtcccttatttaatttcatgttttcattttgatcccaaaattaataaaaatggcattttagtccctcacattttcct 44192470  T
Q  181 ccgtttgtcaaataaatcccttccgtcaa 209  Q
    ||||||||||||||||| | |||||||||    
T  44192469 ccgtttgtcaaataaattctttccgtcaa 44192441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 86 - 213
Target Start/End: Original strand, 6030603 - 6030729
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||| ||| || |||| |||||||    
T  6030603 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttagtcccacaattaataaaattggcgttttagttccttattttttcctccgtt 6030702  T
Q  186 tgtcaaataaatcccttccgtcaaataa 213  Q
    || |||||||||||||||| ||||||||    
T  6030703 tgccaaataaatcccttcc-tcaaataa 6030729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 81 - 200
Target Start/End: Complemental strand, 18617129 - 18617010
Alignment:
Q  81 tttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttact 180  Q
    |||| ||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||| ||    
T  18617129 ttttaggcttattagatcatttggtcctttatttaatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcct 18617030  T
Q  181 ccgtttgtcaaataaatccc 200  Q
    ||||||| ||||||||||||    
T  18617029 ccgtttgccaaataaatccc 18617010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 84 - 200
Target Start/End: Complemental strand, 29220996 - 29220880
Alignment:
Q  84 ttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccg 183  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||| | ||||| ||| |    
T  29220996 ttggcttattagatcgtttggtcccttatttaatttcatattttcattttggtcccacaattaataaaaatggctttttagtcccttacattttcctctg 29220897  T
Q  184 tttgtcaaataaatccc 200  Q
    |||| ||||| ||||||    
T  29220896 tttgccaaattaatccc 29220880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 84 - 200
Target Start/End: Complemental strand, 29334295 - 29334179
Alignment:
Q  84 ttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccg 183  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||| | ||||| ||| |    
T  29334295 ttggcttattagatcgtttggtcccttatttaatttcatattttcattttggtcccacaattaataaaaatggctttttagtcccttacattttcctctg 29334196  T
Q  184 tttgtcaaataaatccc 200  Q
    |||| ||||| ||||||    
T  29334195 tttgccaaattaatccc 29334179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 86 - 198
Target Start/End: Complemental strand, 1085504 - 1085394
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||  ||||| |||||||    
T  1085504 ggcttattagattgtttggtcccttatttaatttcatgttttcattttggtaccacatttaataaaattggcgttttggtccctc--attttcctccgtt 1085407  T
Q  186 tgtcaaataaatc 198  Q
    || ||||||||||    
T  1085406 tgccaaataaatc 1085394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 18615515 - 18615628
Alignment:
Q  87 gcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgttt 186  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||| ||||||||||  | ||||| ||||||||    
T  18615515 gcttattagatcgtttggtcccttatttaatttcatattttcattttggtctcacaattaataaaaatggctttttagtcccctacattttcctccgttt 18615614  T
Q  187 gtcaaataaatccc 200  Q
    | ||||||||||||    
T  18615615 gccaaataaatccc 18615628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 80 - 200
Target Start/End: Original strand, 1082980 - 1083100
Alignment:
Q  80 ttttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttac 179  Q
    ||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||| ||||| |||| |||| |||| |    
T  1082980 tttttaggcttattatatcgtttggtcccttatttaatttcatattttcattttggtcccacatttaataaaaatggtgttttggtccgtcatctttttc 1083079  T
Q  180 tccgtttgtcaaataaatccc 200  Q
    |||||||| ||| ||||||||    
T  1083080 tccgtttgccaattaaatccc 1083100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 82 - 199
Target Start/End: Complemental strand, 6032436 - 6032319
Alignment:
Q  82 ttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactc 181  Q
    |||||||||||||||||||||| ||| ||||| ||||||||||||| |||||||| ||||||||||||||||||| |||||||||||  || |||| |||    
T  6032436 ttttggcttattagatcgtttgatcctttattcaatttcatgtttttattttggttccacaattaataaaaatggtgttttagtcccgtattttttcctc 6032337  T
Q  182 cgtttgtcaaataaatcc 199  Q
     ||||| |||||||||||    
T  6032336 tgtttgccaaataaatcc 6032319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 44191133 - 44191249
Alignment:
Q  85 tggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgt 184  Q
    |||||||| ||||  |||||||||||||||||||||||||||||||||| || ||||||||||||||||| || ||||||||||||||  ||| | | ||    
T  44191133 tggcttataagattatttggtcccttatttaatttcatgttttcattttagtcccacaattaataaaaattgcattttagtccctcatcgtttccactgt 44191232  T
Q  185 ttgtcaaataaatccct 201  Q
    |||||||||||||||||    
T  44191233 ttgtcaaataaatccct 44191249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 80 - 200
Target Start/End: Complemental strand, 32470699 - 32470579
Alignment:
Q  80 ttttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttac 179  Q
    |||||||||||||| ||||  || ||||| ||  |||||||| ||||| |||||||| |||||||||||||||    ||||| ||| |||||| |||| |    
T  32470699 ttttttggcttatttgatccattagtcccctaaataatttcaagtttttattttggtcccacaattaataaaacgtacgtttaagttcctcatgttttcc 32470600  T
Q  180 tccgtttgtcaaataaatccc 200  Q
    |||||||||||||||||||||    
T  32470599 tccgtttgtcaaataaatccc 32470579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 199
Target Start/End: Original strand, 249016 - 249135
Alignment:
Q  80 ttttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttac 179  Q
    ||||||||||||||||||| ||||||||||||  | ||||| | ||||||||||||| ||| | |||||||||||| ||  || |||||||| ||||| |    
T  249016 ttttttggcttattagatcatttggtcccttaagttatttcttattttcattttggtcccatatttaataaaaatgtcgaattggtccctcaaattttgc 249115  T
Q  180 tccgtttgtcaaataaatcc 199  Q
    || ||||| |||| ||||||    
T  249116 tctgtttgccaaaaaaatcc 249135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 199
Target Start/End: Complemental strand, 12359797 - 12359684
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    |||||||||||||   | ||||||||  ||||||||||||||| |||| || ||||||||||||||| ||||||||| ||||||||| |||| ||  |||    
T  12359797 ggcttattagatcaccttgtcccttaaataatttcatgttttcgttttagtcccacaattaataaaattggcgttttggtccctcattttttcctttgtt 12359698  T
Q  186 tgtcaaataaatcc 199  Q
     | |||||||||||    
T  12359697 cgccaaataaatcc 12359684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 101 - 200
Target Start/End: Original strand, 11315946 - 11316045
Alignment:
Q  101 ttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatccc 200  Q
    |||||||| ||  |||||||| |||||||||||||| |||||||||||||||    ||||| |||||||||  |||| ||||||||| ||||||||||||    
T  11315946 ttggtcccctaaataatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcaggttttcctccgtttgccaaataaatccc 11316045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 200
Target Start/End: Complemental strand, 17460806 - 17460688
Alignment:
Q  82 ttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactc 181  Q
    |||||||||||| ||||   ||||||  || ||||||||| |||||||||||| | |||||||||||||||    |||||| |||||||| ||||| |||    
T  17460806 ttttggcttatttgatccaatggtcctctaattaatttcaagttttcattttgatcccacaattaataaaacgtacgttttggtccctcaaattttcctc 17460707  T
Q  182 cgtttgtcaaataaatccc 200  Q
    |||||  ||||||||||||    
T  17460706 cgtttcccaaataaatccc 17460688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 86 - 197
Target Start/End: Original strand, 17459251 - 17459362
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    |||||||| ||||  || ||||||||  |||||||| ||||||||||||||  ||||||||||||||    ||||| |||||||||  |||| |||||||    
T  17459251 ggcttatttgatccattagtcccttaaataatttcaagttttcattttggtcacacaattaataaaacgtacgtttaagtccctcactttttcctccgtt 17459350  T
Q  186 tgtcaaataaat 197  Q
    || |||||||||    
T  17459351 tgccaaataaat 17459362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 105 - 199
Target Start/End: Original strand, 43033099 - 43033193
Alignment:
Q  105 tcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatcc 199  Q
    |||||||  |||||||| |||||||||||||| |||||||||||||||    | |||| ||||||||  |||| ||||||||| |||||||||||    
T  43033099 tcccttaaataatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcactttttcctccgtttgccaaataaatcc 43033193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 199
Target Start/End: Complemental strand, 28562936 - 28562814
Alignment:
Q  77 ttcttttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattt 176  Q
    |||||||| |||||||| |||    |||||||| |  ||||||||  ||||||||||||| ||| |||||||||||    | |||| ||||||||  |||    
T  28562936 ttctttttaggcttatttgattcaatggtccctcaaataatttcaaattttcattttggtcccataattaataaaacataccttttggtccctcactttt 28562837  T
Q  177 tactccgtttgtcaaataaatcc 199  Q
    | |||||||||||||||||||||    
T  28562836 tcctccgtttgtcaaataaatcc 28562814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 33995941 - 33996074
Alignment:
Q  81 tttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttact 180  Q
    |||||| |||| ||| || |||||||||||| ||||||| | ||||||||||| || ||| || |||||||| |   |||||||||||| |  |||  ||    
T  33995941 tttttgacttaataggtcatttggtcccttaattaattttaagttttcatttttgt-ccataactaataaaactcatgttttagtcccttaattttccct 33996039  T
Q  181 ccgtttgtcaaataaatcccttccgtcaaataaat 215  Q
    ||||  ||||||||||||||||| |||||| ||||    
T  33996040 ccgtcggtcaaataaatcccttctgtcaaaaaaat 33996074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 35903503 - 35903572
Alignment:
Q  83 tttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaa 152  Q
    ||||||||| ||| || |||||||| ||| ||||||||| |||||||||||||| ||| || ||||||||    
T  35903503 tttggcttaataggtcatttggtcctttaattaatttcaagttttcattttggtcccataactaataaaa 35903572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 36011689 - 36011636
Alignment:
Q  157 cgttttagtccctcatattttactccgtttgtcaaataaatcccttccgtcaaa 210  Q
    |||||||||||||||| ||||| |||||||| |||||||||| | |||||||||    
T  36011689 cgttttagtccctcattttttaatccgtttgccaaataaatctcatccgtcaaa 36011636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 169
Target Start/End: Complemental strand, 35061433 - 35061351
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccct 169  Q
    |||||| ||| || |||||||||||| ||||||| | |||||||||||||| ||| || |||||||| |  |||||||||||||    
T  35061433 ggcttaataggtcatttggtcccttaattaatttgaagttttcattttggt-ccataactaataaaactcacgttttagtccct 35061351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 84
Target Start/End: Original strand, 6231946 - 6231976
Alignment:
Q  54 gttggagaaaattattgtccttgttcttttt 84  Q
    |||||||||||||||||||||||||||||||    
T  6231946 gttggagaaaattattgtccttgttcttttt 6231976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 152
Target Start/End: Complemental strand, 7437851 - 7437813
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaa 152  Q
    |||||||| |||||||||||||| |||||||||||||||    
T  7437851 taatttcaagttttcattttggtcccacaattaataaaa 7437813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 199
Target Start/End: Original strand, 11547672 - 11547770
Alignment:
Q  101 ttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatcc 199  Q
    ||||||| |||  |||||||| ||||||||||||||  || |||||||||||     ||||||  ||||||| |||| || ||||||||||||||||||    
T  11547672 ttggtcctttaaataatttcaagttttcattttggtctcataattaataaaacacatgttttaacccctcattttttccttcgtttgtcaaataaatcc 11547770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 198
Target Start/End: Original strand, 34512826 - 34512924
Alignment:
Q  100 tttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatc 198  Q
    ||||||||| || |||||| |  |||||||||||||| ||| ||||||||||| |   |||||  ||||||| ||||  ||||||| ||||||||||||    
T  34512826 tttggtcccctaattaattaccagttttcattttggtcccataattaataaaactcatgttttgatccctcaaatttgcctccgttagtcaaataaatc 34512924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 197
Target Start/End: Original strand, 21664816 - 21664911
Alignment:
Q  101 ttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaat 197  Q
    ||||||| ||| ||||||||| ||||||||||||||  ||||||| |||||| |   |||||||| | |||| |||| |||| ||||| ||||||||    
T  21664816 ttggtcctttaattaatttcaagttttcattttggtcacacaattcataaaatttctgttttagt-cttcattttttcctccatttgttaaataaat 21664911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 36010569 - 36010625
Alignment:
Q  80 ttttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggt 136  Q
    |||||||| ||||| ||||  || ||||||||  |||||||||||||||||||||||    
T  36010569 ttttttggtttatttgatccattagtcccttaaataatttcatgttttcattttggt 36010625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 37956961 - 37957013
Alignment:
Q  100 tttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaa 152  Q
    |||||||||||| |||||||||  ||||||||||||| ||| || ||||||||    
T  37956961 tttggtcccttaattaatttcaaattttcattttggtcccataagtaataaaa 37957013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 198
Target Start/End: Complemental strand, 43034561 - 43034477
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatc 198  Q
    |||||||| |||||||||||  |  ||||||||||||||    | |||| ||||||||  |||| ||||||||||||||||||||    
T  43034561 taatttcaagttttcattttaatctcacaattaataaaacgtaccttttggtccctcactttttcctccgtttgtcaaataaatc 43034477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 1e-53; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 100 - 254
Target Start/End: Original strand, 2687242 - 2687396
Alignment:
Q  100 tttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatcc 199  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||| ||||| ||||||||| |||||||||||    
T  2687242 tttggtcccttatttaatttcatgttttcattttgatcccacaattaataaaaatggcgttttagtccttcacattttcctccgtttgccaaataaatcc 2687341  T
Q  200 cttccgtcaaataaatctcttttctattagtagcccatgtggcaagtataaaaaa 254  Q
    ||||||||||||||||||||||||  ||| ||| ||| ||||||| |||||||||    
T  2687342 cttccgtcaaataaatctcttttccgttaataggccacgtggcaattataaaaaa 2687396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 86 - 200
Target Start/End: Complemental strand, 17839257 - 17839143
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||  |||| |||||||    
T  17839257 ggcttattagatcgtttggtcccttatttaatttcttgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccgtt 17839158  T
Q  186 tgtcaaataaatccc 200  Q
    || ||||||||||||    
T  17839157 tgccaaataaatccc 17839143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 83 - 198
Target Start/End: Original strand, 6701375 - 6701490
Alignment:
Q  83 tttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactcc 182  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||  ||||||||||||| ||||| ||||    
T  6701375 tttggcttattagatcgtttggtcccttatttaatttcatattttcattttggtcccacaattaataaaaatggtattttagtccctcacattttcctcc 6701474  T
Q  183 gtttgtcaaataaatc 198  Q
    ||||| ||||||||||    
T  6701475 gtttgccaaataaatc 6701490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 80 - 199
Target Start/End: Original strand, 17837608 - 17837727
Alignment:
Q  80 ttttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttac 179  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||      
T  17837608 ttttttggcttattagatcgtttggtcccttatttaatttattgttttcattttggttccacaattaataaaaatggcgttttagtccctcatcttttct 17837707  T
Q  180 tccgtttgtcaaataaatcc 199  Q
    |||||||  |||||||||||    
T  17837708 tccgtttaccaaataaatcc 17837727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 86 - 200
Target Start/End: Complemental strand, 23397472 - 23397358
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||  |||| |||||||    
T  23397472 ggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccgtt 23397373  T
Q  186 tgtcaaataaatccc 200  Q
    || ||||||||||||    
T  23397372 tgccaaataaatccc 23397358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 86 - 199
Target Start/End: Complemental strand, 2688042 - 2687929
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||  ||||  ||||||    
T  2688042 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttagtcccacaattaataaaaatggcgttttagtccctcacctttttatccgtt 2687943  T
Q  186 tgtcaaataaatcc 199  Q
    || |||||||||||    
T  2687942 tgccaaataaatcc 2687929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 85 - 199
Target Start/End: Complemental strand, 6702989 - 6702876
Alignment:
Q  85 tggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgt 184  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||  |||| ||||||    
T  6702989 tggcttattagatcgtttggtcccttatttaatttcatattttcattttggtcccacaattaataaaaatggcgtttta-tccctcacgttttcctccgt 6702891  T
Q  185 ttgtcaaataaatcc 199  Q
    ||| |||||||||||    
T  6702890 ttgccaaataaatcc 6702876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 81 - 199
Target Start/End: Original strand, 23392207 - 23392325
Alignment:
Q  81 tttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttact 180  Q
    |||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||  |||| ||    
T  23392207 ttttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcct 23392306  T
Q  181 ccgtttgtcaaataaatcc 199  Q
    ||||||| |||||||||||    
T  23392307 ccgtttgccaaataaatcc 23392325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 84 - 200
Target Start/End: Original strand, 29380187 - 29380303
Alignment:
Q  84 ttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccg 183  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||  ||||  ||||    
T  29380187 ttggcttattagatcatttggtcccttatttaatttcttgttttcattttggtcccacaattaacaaaaatggcgttttagtccctcaccttttcttccg 29380286  T
Q  184 tttgtcaaataaatccc 200  Q
    |||| ||||||||||||    
T  29380287 tttgccaaataaatccc 29380303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 86 - 199
Target Start/End: Complemental strand, 5187740 - 5187627
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||| |  ||||  ||||||    
T  5187740 ggcttattagattgtttggtcccttatttaatttcatgttttcattttggtcccataattaataaaaatggcgttttagttccttacctttttgtccgtt 5187641  T
Q  186 tgtcaaataaatcc 199  Q
    || |||||||||||    
T  5187640 tgccaaataaatcc 5187627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 86 - 199
Target Start/End: Complemental strand, 29381848 - 29381735
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||| | |||||||||||||||||| ||||||||||| |||| |||| |||||||    
T  29381848 ggcttattagatcgtttggtcccttatttaatttcttattttcattttgatcccacaattaataaaaatgacgttttagtccttcatcttttcctccgtt 29381749  T
Q  186 tgtcaaataaatcc 199  Q
    |  |||||||||||    
T  29381748 taccaaataaatcc 29381735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 89 - 198
Target Start/End: Original strand, 29722664 - 29722773
Alignment:
Q  89 ttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgt 188  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||| ||||| |||| |||      
T  29722664 ttattagatcatttggtcccttatttaatttcatgttttcattttgatcccataattaataaaaatggcgttttagtccctcacattttcctccattttg 29722763  T
Q  189 caaataaatc 198  Q
    ||||||||||    
T  29722764 caaataaatc 29722773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 86 - 199
Target Start/End: Complemental strand, 32507144 - 32507031
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||| | ||||| ||||||||||||| |||||||||||||| ||||| ||| |||    
T  32507144 ggcttattagattgtttggtcacttatttaatttcatgttttcattttgatcccacatttaataaaaatggtgttttagtccctcacatttttctcagtt 32507045  T
Q  186 tgtcaaataaatcc 199  Q
    || |||||||||||    
T  32507044 tgccaaataaatcc 32507031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 80 - 200
Target Start/End: Original strand, 5186560 - 5186680
Alignment:
Q  80 ttttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttac 179  Q
    ||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||  |||||||||||||| || ||||||| ||| |||| |||| |    
T  5186560 tttttaggcttattagatcatttgatcccttatttaatttcatgttttcattttggtcacacaattaataaaagtgacgttttaatccatcatcttttcc 5186659  T
Q  180 tccgtttgtcaaataaatccc 200  Q
    |||||||| ||||||||||||    
T  5186660 tccgtttgccaaataaatccc 5186680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 86 - 199
Target Start/End: Complemental strand, 18346868 - 18346755
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||  |||||||  |||  ||| |||    
T  18346868 ggcttattagatcatttggtcccttatttaatttcatattttcattttggtcccacaattaataaaaatggcgttttgatccctcacgtttgtctctgtt 18346769  T
Q  186 tgtcaaataaatcc 199  Q
    || |||||||||||    
T  18346768 tgccaaataaatcc 18346755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 86 - 171
Target Start/End: Complemental strand, 12256702 - 12256617
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctca 171  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||  |||||||||||||||| ||||||||||||||||    
T  12256702 ggcttattagattgtttggtcccttatttaatttcatgttttcgttttggtcgcacaattaataaaaatagcgttttagtccctca 12256617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 77 - 200
Target Start/End: Original strand, 232165 - 232286
Alignment:
Q  77 ttcttttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattt 176  Q
    |||||| |||||||| ||||||  |||||||||||  ||||||||  ||||||||||||| ||| |||||||||||    |||||||||||||||  |||    
T  232165 ttctttattggcttaatagatccattggtcccttaaataatttcaatttttcattttggtcccataattaataaaa--cacgttttagtccctcactttt 232262  T
Q  177 tactccgtttgtcaaataaatccc 200  Q
    | ||||||||| ||||||||||||    
T  232263 tcctccgtttgccaaataaatccc 232286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 199
Target Start/End: Complemental strand, 6452629 - 6452516
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    |||||||| ||||  |||||||| ||  |||||||| |||||||||||||| ||| |||||||||||    ||||| |||||||||| |||| |||||||    
T  6452629 ggcttatttgatccattggtcccctaaataatttcaagttttcattttggtcccataattaataaaacgtacgtttgagtccctcattttttcctccgtt 6452530  T
Q  186 tgtcaaataaatcc 199  Q
    || |||||||||||    
T  6452529 tgccaaataaatcc 6452516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 151
Target Start/End: Original strand, 12256557 - 12256614
Alignment:
Q  94 agatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaa 151  Q
    ||||||||||||||||||||||||||||| |||| |||||||| | | ||||||||||    
T  12256557 agatcgtttggtcccttatttaatttcatatttttattttggtcctaaaattaataaa 12256614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 233682 - 233591
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatatttt 177  Q
    |||||| ||||||  ||||||| |||  ||||||||  ||||||||||||| ||| ||||||||||||   |||||||||||||||| ||||    
T  233682 ggcttaatagatcaattggtcctttaaataatttcaatttttcattttggtcccataattaataaaaaacacgttttagtccctcatttttt 233591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 114 - 199
Target Start/End: Original strand, 6452310 - 6452395
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatcc 199  Q
    |||||||| |||||| ||||||| | | |||||||||||    |||||||||||||||  |||| ||||||||| |||||||||||    
T  6452310 taatttcaagttttcgttttggtcctataattaataaaaggtacgttttagtccctcactttttcctccgtttgccaaataaatcc 6452395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 213
Target Start/End: Original strand, 27080941 - 27081049
Alignment:
Q  105 tcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatcccttcc 204  Q
    |||||||  |||||||  ||||||||||||||   ||||||||||||| |  | ||| |||||||||  |||| |||||||||  ||||||||| | |||    
T  27080941 tcccttaaataatttcgagttttcattttggtcttacaattaataaaatttacatttaagtccctcacttttttctccgtttgcgaaataaatctcatcc 27081040  T
Q  205 gtcaaataa 213  Q
    |||||||||    
T  27081041 gtcaaataa 27081049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 153
Target Start/End: Complemental strand, 15730148 - 15730081
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaa 153  Q
    ||||||||||||   ||||||||| | ||||||||   ||||||||||||| ||||||||||||||||    
T  15730148 ggcttattagattcattggtccctcaattaatttccatttttcattttggtcccacaattaataaaaa 15730081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 152
Target Start/End: Original strand, 34023912 - 34023950
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaa 152  Q
    |||||| | ||||||||||||||||||||||||||||||    
T  34023912 taattttaagttttcattttggtaccacaattaataaaa 34023950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 8e-52; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 81 - 200
Target Start/End: Complemental strand, 15234164 - 15234045
Alignment:
Q  81 tttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttact 180  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||    
T  15234164 tttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcacattttcct 15234065  T
Q  181 ccgtttgtcaaataaatccc 200  Q
    ||||||| ||||||||||||    
T  15234064 ccgtttgccaaataaatccc 15234045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 86 - 200
Target Start/End: Complemental strand, 49803013 - 49802899
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||| |||||||    
T  49803013 ggcttgttagatcgtttggtcccttatttaatttcatgttttcattttggtcccacaattaataaaaatgacgttttagtccctcatctttttctccgtt 49802914  T
Q  186 tgtcaaataaatccc 200  Q
    || ||||||||||||    
T  49802913 tgccaaataaatccc 49802899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 86 - 198
Target Start/End: Original strand, 15232750 - 15232862
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||| ||| |||    
T  15232750 ggcttattagatcatttggtcccttatttaatttcatgttttcattttggtcccataattaataaaaatggcgttttagtccctcacattttcctctgtt 15232849  T
Q  186 tgtcaaataaatc 198  Q
    || ||||||||||    
T  15232850 tgccaaataaatc 15232862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 86 - 197
Target Start/End: Original strand, 16963832 - 16963943
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    |||||||||||||||||||||  ||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| |||||||    
T  16963832 ggcttattagatcgtttggtcttttaattaatttcatgttttcattttggtcccacaattaataaaaatggtgttttagtccctcatcttttcctccgtt 16963931  T
Q  186 tgtcaaataaat 197  Q
    || |||||||||    
T  16963932 tgccaaataaat 16963943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 80 - 199
Target Start/End: Original strand, 49801609 - 49801728
Alignment:
Q  80 ttttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttac 179  Q
    ||||| ||||||||||||| |||||||||||||||||||| || ||||||||||||| ||||||||||||||||||| |||||  |||||||  |||  |    
T  49801609 tttttaggcttattagatcatttggtcccttatttaattttatattttcattttggtcccacaattaataaaaatggtgttttgatccctcacgtttgtc 49801708  T
Q  180 tccgtttgtcaaataaatcc 199  Q
    || ||||| |||||||||||    
T  49801709 tctgtttgccaaataaatcc 49801728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 103 - 197
Target Start/End: Complemental strand, 16965228 - 16965134
Alignment:
Q  103 ggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaat 197  Q
    |||||||||||||||||| | ||||||||||||| |||||||||||||||||| ||||||||||||| | |||||  ||||||| ||||||||||    
T  16965228 ggtcccttatttaatttcttattttcattttggtcccacaattaataaaaatgacgttttagtcccttacattttcttccgtttatcaaataaat 16965134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 201
Target Start/End: Original strand, 16123313 - 16123400
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatccct 201  Q
    |||||| | |||||||||||||| ||||||||||||||| |  |||||||||||||||| ||||  |||||||| |||||||||||||    
T  16123313 taatttaaagttttcattttggttccacaattaataaaattcacgttttagtccctcattttttcttccgtttgccaaataaatccct 16123400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 101 - 197
Target Start/End: Complemental strand, 51042445 - 51042350
Alignment:
Q  101 ttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaat 197  Q
    ||||||||||| ||||||||   ||||||||||||| ||||||||||||||| |  |||||||||||||| | |||| ||||||||| |||||||||    
T  51042445 ttggtcccttaattaatttccaattttcattttggtcccacaattaataaaactcacgttttagtccctc-tttttttctccgtttgccaaataaat 51042350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 101 - 223
Target Start/End: Original strand, 15071355 - 15071477
Alignment:
Q  101 ttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatccc 200  Q
    |||||||| ||  |||||||| ||||||||||||||  || |||||||||||     ||||| ||||||||  |||| ||||||||  |||||||||||     
T  15071355 ttggtcccctaaataatttcaagttttcattttggtcacataattaataaaacgtatgttttggtccctcactttttcctccgtttaccaaataaatcca 15071454  T
Q  201 ttccgtcaaataaatctcttttc 223  Q
    ||||||||||||||||| |||||    
T  15071455 ttccgtcaaataaatctattttc 15071477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 113 - 210
Target Start/End: Complemental strand, 44278440 - 44278343
Alignment:
Q  113 ttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatcccttccgtcaaa 210  Q
    ||||||||| |||||||||||||| |||| ||||||||||    |||||| ||||||||| |||| ||||||||| |||||| |||| ||| ||||||    
T  44278440 ttaatttcaagttttcattttggtcccacgattaataaaacgtacgttttggtccctcatttttttctccgtttgccaaatagatcctttctgtcaaa 44278343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 85 - 198
Target Start/End: Complemental strand, 52628992 - 52628879
Alignment:
Q  85 tggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgt 184  Q
    ||||||||| ||||  | |||||||||  |||||||| ||||| |||||||| |||||||||||||||    | |||| ||||||||| |||| ||||||    
T  52628992 tggcttatttgatctatcggtcccttaaataatttcaagttttaattttggtcccacaattaataaaacgtaccttttggtccctcattttttcctccgt 52628893  T
Q  185 ttgtcaaataaatc 198  Q
    ||| ||||||||||    
T  52628892 ttgccaaataaatc 52628879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 113 - 199
Target Start/End: Complemental strand, 15072881 - 15072795
Alignment:
Q  113 ttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatcc 199  Q
    ||||||||| |||||||||||||| |||||||||||||||    | |||| |||||| || |||| ||||||||| |||||||||||    
T  15072881 ttaatttcaagttttcattttggtcccacaattaataaaacgtacattttggtcccttattttttcctccgtttgccaaataaatcc 15072795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 101 - 199
Target Start/End: Complemental strand, 24499758 - 24499660
Alignment:
Q  101 ttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatcc 199  Q
    |||||||| ||  |||||||| ||||||||||||||  |||||||||||||| |  |||||| ||||||||  |||| ||||||||  |||||||||||    
T  24499758 ttggtcccctaaataatttcaagttttcattttggtctcacaattaataaaactcacgttttggtccctcactttttcctccgtttaccaaataaatcc 24499660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 123 - 199
Target Start/End: Complemental strand, 30535750 - 30535674
Alignment:
Q  123 gttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatcc 199  Q
    |||||||||||||| ||| |||||||||||    ||||||||| ||||| || | ||||||||||||||||||||||    
T  30535750 gttttcattttggttccataattaataaaaccaacgttttagttcctcaaatctaactccgtttgtcaaataaatcc 30535674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 46111590 - 46111492
Alignment:
Q  102 tggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatccc 200  Q
    ||||||||||  |||||||| ||||| |||||||| |||||||||||||||    | |||| || |||||| |||| || |||||| ||||||||||||    
T  46111590 tggtcccttaaataatttcaagtttttattttggtcccacaattaataaaacgtaccttttggttcctcattttttccttcgtttgccaaataaatccc 46111492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 114 - 199
Target Start/End: Original strand, 14470882 - 14470967
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatcc 199  Q
    |||||||| |||||||||||||| |||||||||||||||    || || |||||||||  |||| || |||||| |||||||||||    
T  14470882 taatttcaagttttcattttggtcccacaattaataaaacgtacggttaagtccctcactttttccttcgtttgccaaataaatcc 14470967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 201
Target Start/End: Original strand, 46467171 - 46467259
Alignment:
Q  113 ttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatccct 201  Q
    ||||||||| |||||||||||||| ||| || |||||||| |   ||||  ||||||||  |||  |||||||||||||||||||||||    
T  46467171 ttaatttcaagttttcattttggtcccataactaataaaactcatgtttcggtccctcaggtttgcctccgtttgtcaaataaatccct 46467259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 201
Target Start/End: Original strand, 23091349 - 23091464
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    |||||||| ||||  |||||||| ||  ||||||||  |||||||||||||   |||||||||||||    |||||| ||| ||||  |||| |||||||    
T  23091349 ggcttatttgatctattggtcccctaactaatttcacattttcattttggttttacaattaataaaacgtacgttttggtcactcacttttttctccgtt 23091448  T
Q  186 tgtcaaataaatccct 201  Q
    || |||||||||||||    
T  23091449 tgccaaataaatccct 23091464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 138 - 201
Target Start/End: Complemental strand, 44999527 - 44999465
Alignment:
Q  138 ccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatccct 201  Q
    ||||||||||||||| ||||||||| || |||||| |||| ||| ||||| |||||||||||||    
T  44999527 ccacaattaataaaattggcgttttcgt-cctcattttttcctctgtttgccaaataaatccct 44999465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 153
Target Start/End: Original strand, 52627541 - 52627580
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaaa 153  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  52627541 taatttcaagttttcattttggtcccacaattaataaaaa 52627580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 199
Target Start/End: Complemental strand, 14477910 - 14477796
Alignment:
Q  85 tggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgt 184  Q
    ||||||||| ||||   ||||||| ||  |||||| | ||||||| |||| | |||||||||||||||    ||||| |||||||||  |||| ||||||    
T  14477910 tggcttatttgatccaatggtcccataaataattttaagttttcactttgatcccacaattaataaaacgtacgtttaagtccctcacttttttctccgt 14477811  T
Q  185 ttgtcaaataaatcc 199  Q
    ||| |||||||||||    
T  14477810 ttgccaaataaatcc 14477796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 152
Target Start/End: Original strand, 42244625 - 42244695
Alignment:
Q  82 ttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaa 152  Q
    |||||||||| ||| || |||||||| ||| |||||||||  ||||||||||| | ||| |||||||||||    
T  42244625 ttttggcttaataggtcatttggtcctttaattaatttcaaattttcattttgatcccataattaataaaa 42244695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 152
Target Start/End: Complemental strand, 42246005 - 42245939
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaa 152  Q
    |||||| |||||| |||  ||||||| ||||||||| ||||| |||||||| ||| |||||||||||    
T  42246005 ggcttaatagatcatttaatcccttaattaatttcaagtttttattttggttccataattaataaaa 42245939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 199
Target Start/End: Complemental strand, 45585099 - 45585014
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatcc 199  Q
    |||||||| ||||||||||||||  ||||||||||||||    | |||| |||| |||  |||| ||||||||| |||||||||||    
T  45585099 taatttcaagttttcattttggtctcacaattaataaaacgtaccttttggtccttcactttttcctccgtttgccaaataaatcc 45585014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 199
Target Start/End: Complemental strand, 50444788 - 50444703
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatcc 199  Q
    ||||||||  |||||||||| || |||||||||||||||    | |||| ||||||||| |||| ||||| ||| |||||||||||    
T  50444788 taatttcaaattttcattttagtcccacaattaataaaacgtacattttggtccctcattttttcctccgattgccaaataaatcc 50444703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 34352056 - 34352008
Alignment:
Q  104 gtcccttatttaatttcatgttttcattttggtaccacaattaataaaa 152  Q
    ||||||||  |||||| | |||||||||||||| |||||||||||||||    
T  34352056 gtcccttaaataattttaagttttcattttggtcccacaattaataaaa 34352008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 3e-45; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 86 - 198
Target Start/End: Original strand, 17338039 - 17338151
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||    
T  17338039 ggcttattaaatcgtttggtcccttatttaatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcacatttttctccgtt 17338138  T
Q  186 tgtcaaataaatc 198  Q
    || ||||||||||    
T  17338139 tgccaaataaatc 17338151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 86 - 200
Target Start/End: Original strand, 13116328 - 13116442
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||| ||||| |||||||    
T  13116328 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtcccacaattaataaaagtggcgttttagtccttcacattttcctccgtt 13116427  T
Q  186 tgtcaaataaatccc 200  Q
    || ||||||||||||    
T  13116428 tgccaaataaatccc 13116442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 86 - 200
Target Start/End: Complemental strand, 13117751 - 13117637
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||| ||| |||    
T  13117751 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtcccataattaataaaaatggcgttttagtccctcacattttcctctgtt 13117652  T
Q  186 tgtcaaataaatccc 200  Q
    || ||||||||||||    
T  13117651 tgccaaataaatccc 13117637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 86 - 200
Target Start/End: Complemental strand, 42100224 - 42100110
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||  ||||||||||||| |||||||    
T  42100224 ggcttattagatcgtttgatcccttatttaatttcatgttttcattttggtctcacaattaataaaaatggcgttttgatccctcatattttcctccgtt 42100125  T
Q  186 tgtcaaataaatccc 200  Q
    || ||||||| ||||    
T  42100124 tgccaaataattccc 42100110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 86 - 199
Target Start/End: Complemental strand, 17339667 - 17339554
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||| |||||||||||||  |||| |||||||    
T  17339667 ggcttattagatcgtttggtcccttatttaatttcatattttcattttggtccaacaattaataaaaatggcattttagtccctcacgttttcctccgtt 17339568  T
Q  186 tgtcaaataaatcc 199  Q
    || |||||||||||    
T  17339567 tgccaaataaatcc 17339554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 86 - 199
Target Start/End: Original strand, 42098561 - 42098674
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||  |||| ||  |||  |||||||    
T  42098561 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtcccacaattaataaaagtggcgttttgatcccccacgtttgtctccgtt 42098660  T
Q  186 tgtcaaataaatcc 199  Q
    || |||||||||||    
T  42098661 tgccaaataaatcc 42098674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 87 - 213
Target Start/End: Original strand, 211594 - 211720
Alignment:
Q  87 gcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgttt 186  Q
    |||||||||||| |||| |||||||  ||||||||||||||||||||||| |||||||||||||||  | ||||||||||||| |  |||| ||||||||    
T  211594 gcttattagatcatttgatcccttaaataatttcatgttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgttt 211693  T
Q  187 gtcaaataaatcccttccgtcaaataa 213  Q
      ||||||||||||||| |||||||||    
T  211694 accaaataaatcccttctgtcaaataa 211720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 87 - 213
Target Start/End: Complemental strand, 240662 - 240536
Alignment:
Q  87 gcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgttt 186  Q
    |||||||||||| |||| |||||||  ||||||||||||||||||||||| |||||||||||||||  | ||||||||||||| |  |||| ||||||||    
T  240662 gcttattagatcatttgatcccttaaataatttcatgttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgttt 240563  T
Q  187 gtcaaataaatcccttccgtcaaataa 213  Q
      ||||||||||||||| |||||||||    
T  240562 accaaataaatcccttctgtcaaataa 240536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 87 - 213
Target Start/End: Original strand, 725217 - 725343
Alignment:
Q  87 gcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgttt 186  Q
    |||||||||||| |||| |||||||  ||||||||||||||||||||||| |||||||||||||||  | ||||||||||||| |  |||| ||||||||    
T  725217 gcttattagatcatttgatcccttaaataatttcatgttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgttt 725316  T
Q  187 gtcaaataaatcccttccgtcaaataa 213  Q
      ||||||||||||||| |||||||||    
T  725317 accaaataaatcccttctgtcaaataa 725343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 87 - 213
Target Start/End: Complemental strand, 794017 - 793891
Alignment:
Q  87 gcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgttt 186  Q
    |||||||||||| |||| |||||||  ||||||||||||||||||||||| |||||||||||||||  | ||||||||||||| |  |||| ||||||||    
T  794017 gcttattagatcatttgatcccttaaataatttcatgttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgttt 793918  T
Q  187 gtcaaataaatcccttccgtcaaataa 213  Q
      ||||||||||||||| |||||||||    
T  793917 accaaataaatcccttctgtcaaataa 793891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 86 - 198
Target Start/End: Complemental strand, 28420292 - 28420180
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    |||||| ||||||  |||||||||||  ||||||||  ||||||||||||| ||| |||||||||||    |||||||||||||||| |||| |||||||    
T  28420292 ggcttaatagatccattggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcattttttcctccgtt 28420193  T
Q  186 tgtcaaataaatc 198  Q
    |||||||||||||    
T  28420192 tgtcaaataaatc 28420180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 114 - 198
Target Start/End: Original strand, 6397809 - 6397893
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatc 198  Q
    ||||||||| ||||||||||||| ||||||||||||||| |  | |||||||||||||| |||| ||||||||| ||||||||||    
T  6397809 taatttcatattttcattttggtcccacaattaataaaacttacattttagtccctcatttttttctccgtttgccaaataaatc 6397893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 84 - 213
Target Start/End: Original strand, 8570114 - 8570243
Alignment:
Q  84 ttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccg 183  Q
    |||||||||| ||||   ||||||| || ||||||||| |||||||||||||| | |||||||||||||    |||||| ||||||||  |||  ||| |    
T  8570114 ttggcttatttgatccaatggtcccctaattaatttcacgttttcattttggtcctacaattaataaaacgtacgttttggtccctcacttttgtctctg 8570213  T
Q  184 tttgtcaaataaatcccttccgtcaaataa 213  Q
    |||| ||||||||||||||| |||||||||    
T  8570214 tttgccaaataaatcccttctgtcaaataa 8570243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 82 - 195
Target Start/End: Original strand, 32797132 - 32797245
Alignment:
Q  82 ttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactc 181  Q
    |||||||||||| ||||  |||||||||||  |||||||| |||||||||||||| |||||||||||||||    ||||| |||||||||  |||| |||    
T  32797132 ttttggcttatttgatctattggtcccttaaataatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcaggttttcctc 32797231  T
Q  182 cgtttgtcaaataa 195  Q
    |||||  |||||||    
T  32797232 cgtttaccaaataa 32797245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 114 - 199
Target Start/End: Complemental strand, 32798622 - 32798537
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatcc 199  Q
    |||||||| |||||||||||||| |||||||||||||||    | |||||||||||||  |||| |||||||||||||||||||||    
T  32798622 taatttcaagttttcattttggtcccacaattaataaaacgtaccttttagtccctcaattttttctccgtttgtcaaataaatcc 32798537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 198
Target Start/End: Original strand, 28418804 - 28418916
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    |||||| ||||||  |||||||||||  ||||||||  ||||||||||||| ||| |||||||||||    |||||||||||||||  |||| |||||||    
T  28418804 ggcttaatagatccattggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcactttttcctccgtt 28418903  T
Q  186 tgtcaaataaatc 198  Q
    || ||||||||||    
T  28418904 tgccaaataaatc 28418916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 198
Target Start/End: Complemental strand, 6398577 - 6398503
Alignment:
Q  124 ttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatc 198  Q
    |||||||||||||  || |||||||||||   ||||||||||||||||| |||| ||||||||||||||||||||    
T  6398577 ttttcattttggtctcataattaataaaacaagcgttttagtccctcattttttcctccgtttgtcaaataaatc 6398503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 210
Target Start/End: Original strand, 26696546 - 26696654
Alignment:
Q  102 tggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatccct 201  Q
    ||||||| || ||||||||| |||||||||||||| |||||||||||||||    | |||| ||||||||  |||| |||| |||| ||||||||||| |    
T  26696546 tggtcccctaattaatttcaagttttcattttggtcccacaattaataaaacatacattttggtccctcactttttcctccatttgccaaataaatcctt 26696645  T
Q  202 tccgtcaaa 210  Q
    || ||||||    
T  26696646 tctgtcaaa 26696654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 198
Target Start/End: Complemental strand, 212835 - 212718
Alignment:
Q  81 tttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttact 180  Q
    ||||||||||||| ||||  || |||||  |  ||||||||  |||||||||| || |||||||||| ||||  || ||||||||||||||  |||| ||    
T  212835 tttttggcttatttgatccattagtcccccaaataatttcagattttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttcct 212736  T
Q  181 ccgtttgtcaaataaatc 198  Q
     |||||||||||||||||    
T  212735 tcgtttgtcaaataaatc 212718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 198
Target Start/End: Original strand, 239419 - 239536
Alignment:
Q  81 tttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttact 180  Q
    ||||||||||||| ||||  || |||||  |  ||||||||  |||||||||| || |||||||||| ||||  || ||||||||||||||  |||| ||    
T  239419 tttttggcttatttgatccattagtcccccaaataatttcagattttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttcct 239518  T
Q  181 ccgtttgtcaaataaatc 198  Q
     |||||||||||||||||    
T  239519 tcgtttgtcaaataaatc 239536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 198
Target Start/End: Complemental strand, 726458 - 726341
Alignment:
Q  81 tttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttact 180  Q
    ||||||||||||| ||||  || |||||  |  ||||||||  |||||||||| || |||||||||| ||||  || ||||||||||||||  |||| ||    
T  726458 tttttggcttatttgatccattagtcccccaaataatttcagattttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttcct 726359  T
Q  181 ccgtttgtcaaataaatc 198  Q
     |||||||||||||||||    
T  726358 tcgtttgtcaaataaatc 726341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 198
Target Start/End: Original strand, 792774 - 792891
Alignment:
Q  81 tttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttact 180  Q
    ||||||||||||| ||||  || |||||  |  ||||||||  |||||||||| || |||||||||| ||||  || ||||||||||||||  |||| ||    
T  792774 tttttggcttatttgatccattagtcccccaaataatttcagattttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttcct 792873  T
Q  181 ccgtttgtcaaataaatc 198  Q
     |||||||||||||||||    
T  792874 tcgtttgtcaaataaatc 792891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 198
Target Start/End: Complemental strand, 798959 - 798842
Alignment:
Q  81 tttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttact 180  Q
    ||||||||||||| ||||  || |||||  |  ||||||||  |||||||||| || |||||||||| ||||  || ||||||||||||||  |||| ||    
T  798959 tttttggcttatttgatccattagtcccccaaataatttcagattttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttcct 798860  T
Q  181 ccgtttgtcaaataaatc 198  Q
     |||||||||||||||||    
T  798859 tcgtttgtcaaataaatc 798842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 200
Target Start/End: Original strand, 32693855 - 32693942
Alignment:
Q  113 ttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatccc 200  Q
    ||||||| | |||||||||||||| |||||||||||||||    || ||| |||| ||| ||||| ||||||||| ||||||||||||    
T  32693855 ttaattttaagttttcattttggtcccacaattaataaaacatacgctttggtccttcagattttcctccgtttgccaaataaatccc 32693942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 113 - 198
Target Start/End: Complemental strand, 14840990 - 14840905
Alignment:
Q  113 ttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatc 198  Q
    |||||||||  ||||||||||||||||| || |||||||| |   ||||| |||||||||||||  |||||| | |||||||||||    
T  14840990 ttaatttcaaattttcattttggtaccataactaataaaattcatgttttggtccctcatatttgtctccgtctatcaaataaatc 14840905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 201
Target Start/End: Complemental strand, 8571740 - 8571620
Alignment:
Q  81 tttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttact 180  Q
    ||||||||||||| ||||  |||||| | ||  ||||||||  |||||||||||||   |||||||||||||    |||||| |||| |||| |||| ||    
T  8571740 tttttggcttatttgatctattggtctcctaactaatttcacattttcattttggtcatacaattaataaaacgtacgttttggtccttcatttttttct 8571641  T
Q  181 ccgtttgtcaaataaatccct 201  Q
    ||||||  |||||||||||||    
T  8571640 ccgtttaccaaataaatccct 8571620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 171
Target Start/End: Original strand, 23702953 - 23703040
Alignment:
Q  84 ttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctca 171  Q
    |||||||||||||||  |||||||| ||  ||||||  | ||||||||||||| ||| | ||||||||| |||||  |||||||||||    
T  23702953 ttggcttattagatccattggtcccctaactaatttgttattttcattttggtcccatatttaataaaagtggcgaattagtccctca 23703040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 169
Target Start/End: Original strand, 42870839 - 42870894
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccct 169  Q
    |||||||| |||||||||||||| |||||||||||||||    |||||||||||||    
T  42870839 taatttcaagttttcattttggtcccacaattaataaaacgtacgttttagtccct 42870894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 201
Target Start/End: Complemental strand, 45437600 - 45437485
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    |||||| ||| || |||| |||| || ||||||||| |||||||||||| | ||| ||||||||||| |   ||||| ||||||| | |||  ||||| |    
T  45437600 ggcttaataggtcatttgatcccctaattaatttcaagttttcattttgatcccataattaataaaactcatgttttggtccctcgtgtttgcctccgct 45437501  T
Q  186 tgtcaaataaatccct 201  Q
     |||||||||||||||    
T  45437500 agtcaaataaatccct 45437485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 32100004 - 32099937
Alignment:
Q  14 atatatatagtgaaggtaaaagtaatgttctcannnnnnngttggagaaaattattgtccttgttctt 81  Q
    ||||||||| |||| ||||| |||| |||||||       ||||||||||||||||||||||||||||    
T  32100004 atatatatattgaatgtaaacgtaacgttctcatttttttgttggagaaaattattgtccttgttctt 32099937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 200
Target Start/End: Complemental strand, 45281278 - 45281193
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatccc 200  Q
    |||||||| |||||||||||||| | |||||||||||||||   |||||  ||| ||| ||||| |||| |||| ||||||||||||    
T  45281278 taatttcaagttttcattttggtccaacaattaataaaaat-atgttttgatccttcagattttcctccatttgccaaataaatccc 45281193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 171
Target Start/End: Complemental strand, 23708867 - 23708782
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctca 171  Q
    |||||||||||||  |||||||| ||  ||||||  | ||||||||||||| ||| | ||||||||| |||||  |||||||||||    
T  23708867 ggcttattagatccattggtcccctaactaatttgttattttcattttggtcccatatttaataaaagtggcgaattagtccctca 23708782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 2e-43; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 85 - 198
Target Start/End: Complemental strand, 22538967 - 22538854
Alignment:
Q  85 tggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgt 184  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||| |||| ||||||    
T  22538967 tggcttattagatcgtttggtcccttatttaatttcatgttttctttttggtcccacaattaataaaaatgacgttttagtccctcatcttttcctccgt 22538868  T
Q  185 ttgtcaaataaatc 198  Q
    ||| ||||||||||    
T  22538867 ttgccaaataaatc 22538854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 85 - 200
Target Start/End: Original strand, 22335976 - 22336091
Alignment:
Q  85 tggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgt 184  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||  |||| ||| ||    
T  22335976 tggcttattagatcttttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctcagt 22336075  T
Q  185 ttgtcaaataaatccc 200  Q
    ||| ||||||||||||    
T  22336076 ttgccaaataaatccc 22336091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 86 - 200
Target Start/End: Complemental strand, 13564357 - 13564243
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    ||||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||| |||||||    
T  13564357 ggcttattagatcatttagtcccttatttaatttcttgttttcattttggtcccacaattaataaaactggcgttttagtccctcacattttcctccgtt 13564258  T
Q  186 tgtcaaataaatccc 200  Q
    || ||||||||||||    
T  13564257 tgccaaataaatccc 13564243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 80 - 201
Target Start/End: Original strand, 3413524 - 3413645
Alignment:
Q  80 ttttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttac 179  Q
    ||||||||||||||||||||||||||||  ||  ||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||  ||||||    
T  3413524 ttttttggcttattagatcgtttggtcctctaaataatttcgtgttttcattttggtcctacaattaataaaaatggcgttttagtccctcaccttttac 3413623  T
Q  180 tccgtttgtcaaataaatccct 201  Q
    || ||||| |||||||||||||    
T  3413624 tctgtttgccaaataaatccct 3413645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 86 - 200
Target Start/End: Original strand, 13562820 - 13562934
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    ||||||||||||||||| ||||||||||||||||| |||||| |||||||| |||||| ||||||||||||||||||||||||||| ||||| ||| |||    
T  13562820 ggcttattagatcgtttagtcccttatttaatttcttgtttttattttggtcccacaagtaataaaaatggcgttttagtccctcacatttttctctgtt 13562919  T
Q  186 tgtcaaataaatccc 200  Q
    |  ||||||||||||    
T  13562920 taccaaataaatccc 13562934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 84 - 213
Target Start/End: Complemental strand, 3414954 - 3414825
Alignment:
Q  84 ttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccg 183  Q
    ||||||||||||| ||||| ||||| ||  ||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||  |||| ||||     
T  3414954 ttggcttattagaacgtttagtcccctaaataatttcatgttttcattttggtcccataattaataaaaatggcgttttagtccttcactttttcctcca 3414855  T
Q  184 tttgtcaaataaatcccttccgtcaaataa 213  Q
    |||| ||||||||||| ||| |||||||||    
T  3414854 tttgccaaataaatcctttctgtcaaataa 3414825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 83 - 200
Target Start/End: Original strand, 11501175 - 11501292
Alignment:
Q  83 tttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactcc 182  Q
    |||| |||||||||||||||||||| ||| |||||||||||||||||||||||| ||||| ||||||||||| || |||||||||||||  |||| ||||    
T  11501175 tttgacttattagatcgtttggtcctttaattaatttcatgttttcattttggtcccacagttaataaaaatagcattttagtccctcaccttttcctcc 11501274  T
Q  183 gtttgtcaaataaatccc 200  Q
     |||| ||||||||||||    
T  11501275 atttgccaaataaatccc 11501292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 86 - 200
Target Start/End: Complemental strand, 40812731 - 40812617
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||    ||||||  ||||||||||||| ||| |||    
T  40812731 ggcttattagatcgtttgatcccttatttaatttcatgttttcattttggttccataattaataaaacgtacgttttgctccctcatattttcctctgtt 40812632  T
Q  186 tgtcaaataaatccc 200  Q
    ||||||||| |||||    
T  40812631 tgtcaaatatatccc 40812617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 86 - 199
Target Start/End: Complemental strand, 22337488 - 22337376
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||  || ||||||| | ||||| |||||||    
T  22337488 ggcttattagattgtttggtcccttatttagtttcatgttttcattttgatcccacaattaataaaaatggc-attcagtcccttacattttcctccgtt 22337390  T
Q  186 tgtcaaataaatcc 199  Q
    || |||||||||||    
T  22337389 tgccaaataaatcc 22337376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 40738961 - 40738829
Alignment:
Q  82 ttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaa-tggcgttttagtccctcatattttact 180  Q
    ||||||||||||||||||||||||||| ||   ||||||||||||| |||||||| ||| ||||||||||||  |||||||||||||||||  |||| ||    
T  40738961 ttttggcttattagatcgtttggtcccctaaacaatttcatgtttttattttggtcccataattaataaaaacaggcgttttagtccctcactttttgct 40738862  T
Q  181 ccgtttgtcaaataaatcccttccgtcaaataa 213  Q
    | ||||| ||||||||||| ||| |||||||||    
T  40738861 ctgtttgccaaataaatccattctgtcaaataa 40738829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 86 - 200
Target Start/End: Complemental strand, 11502540 - 11502426
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    |||||||||||||||||||||| |||  ||||||||||||||||||||| | ||||| ||||||||||| |||  |||||||||||  |||| ||| |||    
T  11502540 ggcttattagatcgtttggtcctttaactaatttcatgttttcattttgatcccacatttaataaaaattgcgaattagtccctcaacttttgctctgtt 11502441  T
Q  186 tgtcaaataaatccc 200  Q
    || ||||||||||||    
T  11502440 tgccaaataaatccc 11502426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 89 - 199
Target Start/End: Original strand, 24844262 - 24844372
Alignment:
Q  89 ttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgt 188  Q
    ||||| ||||| ||| ||||||||||||||| ||||||| ||||| || | |||||||||| ||||||||||||||||||||| |||||  ||||||||     
T  24844262 ttattggatcgattgatcccttatttaattttatgtttttatttttgttctacaattaatacaaatggcgttttagtccctcacattttcttccgtttgc 24844361  T
Q  189 caaataaatcc 199  Q
    |||||||||||    
T  24844362 caaataaatcc 24844372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 199
Target Start/End: Original strand, 22537552 - 22537670
Alignment:
Q  81 tttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttact 180  Q
    |||| |||||||||||||||||| ||||||||||||||| || ||||||||||||| ||||||||| |||||||| | ||||  |||||||  |||  ||    
T  22537552 ttttaggcttattagatcgtttgctcccttatttaattttatattttcattttggtcccacaattactaaaaatgacattttgatccctcacgtttgtct 22537651  T
Q  181 ccgtttgtcaaataaatcc 199  Q
    | ||||| |||||||||||    
T  22537652 ctgtttgccaaataaatcc 22537670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 85 - 198
Target Start/End: Original strand, 43459452 - 43459565
Alignment:
Q  85 tggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgt 184  Q
    ||||||||| ||||  || ||||| ||  |||||||| |||||||||||||| |||||||||||||||   |||||| |||||||||| |||| ||||||    
T  43459452 tggcttatttgatccattagtcccctaaataatttcaagttttcattttggtcccacaattaataaaacgtgcgtttaagtccctcatgttttcctccgt 43459551  T
Q  185 ttgtcaaataaatc 198  Q
    ||| ||||||||||    
T  43459552 ttgccaaataaatc 43459565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 114 - 210
Target Start/End: Original strand, 32602959 - 32603055
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatcccttccgtcaaa 210  Q
    |||||||| ||||| |||||||| ||| |||||||||||    |||||||||||||||  |||||||||||||| |||||||||| | |||||||||    
T  32602959 taatttcaagtttttattttggtcccataattaataaaacgtacgttttagtccctcactttttactccgtttgccaaataaatctcatccgtcaaa 32603055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 89 - 203
Target Start/End: Original strand, 24281075 - 24281190
Alignment:
Q  89 ttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaa-tggcgttttagtccctcatattttactccgtttg 187  Q
    |||||||||| |||| |||  ||  |||||||||||||| |||||||| ||||||||||||||||   ||||||||||||||||  ||||  |||||| |    
T  24281075 ttattagatcatttgatcctctaaataatttcatgtttttattttggtcccacaattaataaaaacaagcgttttagtccctcaattttttatccgttcg 24281174  T
Q  188 tcaaataaatcccttc 203  Q
     |||||||||||||||    
T  24281175 ccaaataaatcccttc 24281190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 155
Target Start/End: Complemental strand, 24844457 - 24844399
Alignment:
Q  97 tcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatg 155  Q
    ||||||| |||||||||||||||||||||||||||||| | | ||||||||||||||||    
T  24844457 tcgtttgatcccttatttaatttcatgttttcattttgatcctacaattaataaaaatg 24844399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 114 - 199
Target Start/End: Complemental strand, 24283065 - 24282981
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatcc 199  Q
    ||||||||  ||||||||||||| |||||||||| ||| | |||| |||||||||||| ||||| ||||||||| |||||||||||    
T  24283065 taatttcagattttcattttggttccacaattaaaaaaca-ggcgctttagtccctcacattttcctccgtttgccaaataaatcc 24282981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 101 - 198
Target Start/End: Original strand, 30333298 - 30333395
Alignment:
Q  101 ttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatc 198  Q
    |||||||| ||  |||||||| |||||||||||||| |||||||||||||||      |||| ||||||||| |||| ||||||||||||||||||||    
T  30333298 ttggtcccctaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcatttttttctccgtttgtcaaataaatc 30333395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 45454052 - 45454149
Alignment:
Q  102 tggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatcc 199  Q
    ||||||| || ||||||||| ||||||||||||||  || |||||||||||    |||||||||||||||  |||| ||||||||| |||||||||||    
T  45454052 tggtcccctaattaatttcacgttttcattttggtctcataattaataaaacatacgttttagtccctcactttttcctccgtttgccaaataaatcc 45454149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 192
Target Start/End: Complemental strand, 534165 - 534078
Alignment:
Q  105 tcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaa 192  Q
    ||||||| |||||||||| |||||||||||||  |||| ||||||||||||| |  ||||||||||| |||||  | |||||||||||    
T  534165 tcccttaattaatttcatcttttcattttggtctcacatttaataaaaatggtgaattagtccctcaaattttgtttcgtttgtcaaa 534078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 192
Target Start/End: Original strand, 537331 - 537418
Alignment:
Q  105 tcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaa 192  Q
    ||||||| |||||||||| |||||||||||||  |||| ||||||||||||| |  ||||||||||| |||||  | |||||||||||    
T  537331 tcccttaattaatttcatcttttcattttggtctcacatttaataaaaatggtgaattagtccctcaaattttgtttcgtttgtcaaa 537418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 114 - 198
Target Start/End: Complemental strand, 4300138 - 4300054
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatc 198  Q
    |||||||| |||||||||||||| |||||||||||||||    ||||| |||||||||  |||| ||| ||||| ||||||||||    
T  4300138 taatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcactttttcctctgtttgccaaataaatc 4300054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 30310137 - 30310233
Alignment:
Q  104 gtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatccc 200  Q
    ||||||||  |||||||| ||||||||||| || |||||||||||||||    | ||| ||| |||||| |||| ||||||||| ||||||||||||    
T  30310137 gtcccttaaataatttcaagttttcatttttgtcccacaattaataaaacgtacatttgagttcctcattttttcctccgtttgccaaataaatccc 30310233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 198
Target Start/End: Complemental strand, 45455474 - 45455378
Alignment:
Q  102 tggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatc 198  Q
    |||||||||| |||||||||  ||||||||||||| |||||||||||||||    | ||||  |||||||  |||| ||||||||| ||||||||||    
T  45455474 tggtcccttaattaatttcaaattttcattttggtcccacaattaataaaacgtacattttgatccctcacttttttctccgtttgccaaataaatc 45455378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 80 - 199
Target Start/End: Original strand, 47059100 - 47059219
Alignment:
Q  80 ttttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttac 179  Q
    ||||| ||||||||||||    ||||||| || ||||||| | |||||||||||||| | |||||||||||||    ||||||  |||||||  |||| |    
T  47059100 tttttgggcttattagattcaatggtcccctaattaattttaagttttcattttggtcctacaattaataaaatgtacgttttgatccctcactttttcc 47059199  T
Q  180 tccgtttgtcaaataaatcc 199  Q
    |||||||| |||||||||||    
T  47059200 tccgtttgccaaataaatcc 47059219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 200
Target Start/End: Original strand, 47454330 - 47454449
Alignment:
Q  81 tttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttact 180  Q
    ||||||||||||| ||||   |||||||| |  |||||||| | |||||||||||| |||||||||||||||    | |||| ||||||||  |||| ||    
T  47454330 tttttggcttatttgatccagtggtccctcaaataatttcaagctttcattttggtcccacaattaataaaacgtacattttggtccctcaagtttttct 47454429  T
Q  181 ccgtttgtcaaataaatccc 200  Q
     |||||| ||||||||||||    
T  47454430 tcgtttgccaaataaatccc 47454449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 198
Target Start/End: Original strand, 11344533 - 11344614
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatc 198  Q
    |||||||| |||||||||||||| |||||||||||||||    ||||| ||||| |||   ||| ||||||||||||||||||||    
T  11344533 taatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccttca---ttttctccgtttgtcaaataaatc 11344614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 200
Target Start/End: Original strand, 32254984 - 32255101
Alignment:
Q  83 tttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactcc 182  Q
    |||||||||||| ||| |||||||||| |  ||||||||  |||| |||||||| ||| |||||||||||    | ||||  |||||||  |||| ||||    
T  32254984 tttggcttattaaatcatttggtccctcaaataatttcaaatttttattttggtcccataattaataaaacgtacattttgatccctcactttttcctcc 32255083  T
Q  183 gtttgtcaaataaatccc 200  Q
    ||||| ||||||||||||    
T  32255084 gtttgccaaataaatccc 32255101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 114 - 199
Target Start/End: Original strand, 40508404 - 40508489
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatcc 199  Q
    |||||||| ||||||||||| || |||||||||||||||    ||||| |||||||||  |||| ||||||| | |||||||||||    
T  40508404 taatttcaagttttcatttttgtcccacaattaataaaacgtacgtttaagtccctcactttttcctccgttagccaaataaatcc 40508489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 170
Target Start/End: Complemental strand, 33779174 - 33779118
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctc 170  Q
    |||||||| |||||||||||||  ||||||||||||||| |  ||||||||||||||    
T  33779174 taatttcaagttttcattttggccccacaattaataaaactcacgttttagtccctc 33779118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 198
Target Start/End: Complemental strand, 40509824 - 40509740
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatc 198  Q
    |||||||| |||||||||||||| |||||||||||||||    ||||| ||| |||||  |||| ||||||||  ||||||||||    
T  40509824 taatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagttcctcactttttcctccgtttaccaaataaatc 40509740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 199
Target Start/End: Complemental strand, 43460904 - 43460828
Alignment:
Q  123 gttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatcc 199  Q
    |||||||||||||| |||||||||||||||    | |||||||||||||  |||| |||| |||| |||||||||||    
T  43460904 gttttcattttggtcccacaattaataaaacgtacattttagtccctcactttttcctccatttgccaaataaatcc 43460828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 198
Target Start/End: Complemental strand, 47456465 - 47456381
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatc 198  Q
    |||||||| |||||||||||||| |||||||||||||||    | |||| ||||||||| ||||  || ||||| ||||||||||    
T  47456465 taatttcaagttttcattttggtcccacaattaataaaacgtactttttggtccctcattttttcttctgtttgccaaataaatc 47456381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 199
Target Start/End: Complemental strand, 30311589 - 30311474
Alignment:
Q  84 ttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccg 183  Q
    |||||||||| ||||  || ||||| ||  ||||||||  ||||||||||||| |||||||||||||||    ||||| |||||||||| |||| ||| |    
T  30311589 ttggcttatttgatccattagtcccctaaataatttcaaattttcattttggtcccacaattaataaaacatacgtttaagtccctcatttttttctctg 30311490  T
Q  184 tttgtcaaataaatcc 199  Q
    || | ||| |||||||    
T  30311489 ttagccaattaaatcc 30311474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 152
Target Start/End: Complemental strand, 22115254 - 22115216
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaa 152  Q
    |||||||| |||||||||||||| |||||||||||||||    
T  22115254 taatttcaagttttcattttggtcccacaattaataaaa 22115216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 152
Target Start/End: Complemental strand, 30334755 - 30334689
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaa 152  Q
    |||||| ||||||  |||||||| ||  |||||||| ||||||||||| || |||||||||||||||    
T  30334755 ggcttaatagatccattggtcccctaactaatttcaagttttcattttagtcccacaattaataaaa 30334689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 215
Target Start/End: Complemental strand, 35664408 - 35664270
Alignment:
Q  77 ttcttttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattt 176  Q
    |||||||| |||||||||||||  ||| ||||||| ||||||||   ||||||||||| | ||| || |||||||||   | |||| |||||| |  |||    
T  35664408 ttctttttaggcttattagatccattgatcccttaattaatttccatttttcattttgatcccataagtaataaaaaataccttttggtcccttagtttt 35664309  T
Q  177 tactccgtttgtcaaataaatcccttccgtcaaataaat 215  Q
      ||||||||| |||| ||||| | ||||||||| ||||    
T  35664308 atctccgtttgccaaaaaaatctcatccgtcaaaaaaat 35664270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 38539669 - 38539735
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaa 152  Q
    |||||| ||| || |||| ||||||| ||||||||| |||||||||||||| ||| || ||||||||    
T  38539669 ggcttaataggtcatttgatcccttaattaatttcaagttttcattttggtcccataaataataaaa 38539735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 9660116 - 9660169
Alignment:
Q  83 tttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggt 136  Q
    ||||||||| ||| || ||||| |||||| ||||||||| ||||||||||||||    
T  9660116 tttggcttaataggtcatttggacccttaattaatttcaagttttcattttggt 9660169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 199
Target Start/End: Original strand, 33096895 - 33096980
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatcc 199  Q
    |||||||| ||| ||||||| |  ||||||||||||||| |  | |||| ||||||||  |||| ||||||||| |||||||||||    
T  33096895 taatttcaagttctcattttaggcccacaattaataaaacttaccttttggtccctcactttttcctccgtttgccaaataaatcc 33096980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 41078748 - 41078821
Alignment:
Q  80 ttttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaa 153  Q
    ||||| |||||||||||||   |||||||| | ||||||||   ||||||||||||| |||||||| |||||||    
T  41078748 tttttaggcttattagatccgctggtccctcaattaatttccatttttcattttggtcccacaattgataaaaa 41078821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 25533200 - 25533252
Alignment:
Q  100 tttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaa 152  Q
    ||||||| |||| ||||||||| |||||||||||||| ||| || ||||||||    
T  25533200 tttggtctcttaattaatttcaagttttcattttggtcccataactaataaaa 25533252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 197
Target Start/End: Complemental strand, 32256514 - 32256402
Alignment:
Q  85 tggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgt 184  Q
    ||||||||| ||||   |||||||| |  |||||||| |||||||||||||| ||| |||||||||||    | |||| ||||||||  |||| |||| |    
T  32256514 tggcttatttgatccaatggtccctcaaataatttcaagttttcattttggtcccataattaataaaatgtaccttttggtccctcactttttcctccat 32256415  T
Q  185 ttgtcaaataaat 197  Q
    ||| |||||||||    
T  32256414 ttgccaaataaat 32256402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 7e-43; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 86 - 198
Target Start/End: Original strand, 30910739 - 30910851
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||| |||    
T  30910739 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcacattttcctctgtt 30910838  T
Q  186 tgtcaaataaatc 198  Q
    |  ||||||||||    
T  30910839 taccaaataaatc 30910851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 84 - 200
Target Start/End: Complemental strand, 30912282 - 30912166
Alignment:
Q  84 ttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccg 183  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||  |||| |||||    
T  30912282 ttggcttattagatcgtttagtcccttatttaatttcatgttttcattttggtcccacaattaataaaagtggcgttttagtccctcacctttttctccg 30912183  T
Q  184 tttgtcaaataaatccc 200  Q
    |||| ||||||||||||    
T  30912182 tttgccaaataaatccc 30912166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 86 - 199
Target Start/End: Complemental strand, 33174078 - 33173965
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||  |||| ||| |||    
T  33174078 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctctgtt 33173979  T
Q  186 tgtcaaataaatcc 199  Q
    || |||||||||||    
T  33173978 tgccaaataaatcc 33173965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 86 - 199
Target Start/End: Complemental strand, 22308917 - 22308804
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    ||||||||||||||||||||||| ||  ||||||||||||||||||||||| ||| |||||||||||  ||||||||||||||||| ||||| |||||||    
T  22308917 ggcttattagatcgtttggtcccctaaataatttcatgttttcattttggtcccataattaataaaacaggcgttttagtccctcacattttgctccgtt 22308818  T
Q  186 tgtcaaataaatcc 199  Q
    || |||||||||||    
T  22308817 tgccaaataaatcc 22308804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 81 - 213
Target Start/End: Original strand, 22307501 - 22307633
Alignment:
Q  81 tttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttact 180  Q
    |||||||||||||||||||||||||||| ||   |||||||||||||||||||||| ||| |||||||||||  || ||||||||||||||  |||| ||    
T  22307501 tttttggcttattagatcgtttggtcccctaaacaatttcatgttttcattttggttccataattaataaaacaggtgttttagtccctcactttttgct 22307600  T
Q  181 ccgtttgtcaaataaatcccttccgtcaaataa 213  Q
    | ||||| ||||||||||||||| |||||||||    
T  22307601 ctgtttgccaaataaatcccttctgtcaaataa 22307633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 22047746 - 22047843
Alignment:
Q  102 tggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatcc 199  Q
    |||||||||| ||||||||| |||||||||||||| |||||||||||||||    |||||| ||||||||| |||| ||||||||| |||||||||||    
T  22047746 tggtcccttaattaatttcaagttttcattttggtcccacaattaataaaacgtacgttttggtccctcattttttcctccgtttgccaaataaatcc 22047843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 113 - 199
Target Start/End: Complemental strand, 39605560 - 39605474
Alignment:
Q  113 ttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatcc 199  Q
    ||||||||| |||||||||||||| |||||||||||||||    |||||| |||||||| ||||| ||||||||| |||||||||||    
T  39605560 ttaatttcaagttttcattttggtcccacaattaataaaacatacgttttggtccctcagattttcctccgtttgccaaataaatcc 39605474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 114 - 198
Target Start/End: Original strand, 39603879 - 39603963
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatc 198  Q
    |||||||| |||||||||||| | |||||||||||||||    |||||| |||||||| ||||| ||||||||| ||||||||||    
T  39603879 taatttcaagttttcattttgatcccacaattaataaaacgtacgttttggtccctcaaattttcctccgtttgccaaataaatc 39603963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 114 - 200
Target Start/End: Complemental strand, 325275 - 325189
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatccc 200  Q
    |||||||| |||||||||||||| |||||||||||||||    | |||| ||||||||  |||| ||||||||| ||||||||||||    
T  325275 taatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcaagttttcctccgtttgccaaataaatccc 325189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 195
Target Start/End: Complemental strand, 30859262 - 30859181
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataa 195  Q
    |||||||| |||||||||||||| |||||||||||||||    ||||| ||||||||| ||||| ||| ||||| |||||||    
T  30859262 taatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcacattttcctctgtttgccaaataa 30859181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 100 - 200
Target Start/End: Original strand, 8521267 - 8521367
Alignment:
Q  100 tttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatcc 199  Q
    |||||||||||| ||||||||| |||||||||||||| ||| || |||||||| |   ||||| ||||||||  |||  ||||||  |||||||||||||    
T  8521267 tttggtcccttaattaatttcaagttttcattttggtcccataactaataaaactcatgttttggtccctcacgtttgtctccgtcagtcaaataaatcc 8521366  T
Q  200 c 200  Q
    |    
T  8521367 c 8521367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 81 - 201
Target Start/End: Complemental strand, 22049259 - 22049139
Alignment:
Q  81 tttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttact 180  Q
    ||||||||||||| || |  || ||||| ||  |||||||| |||||||||||||| ||| |||||||||||    |||||| ||||||||  |||| ||    
T  22049259 tttttggcttatttgaaccattagtcccctaaataatttcaagttttcattttggtcccataattaataaaacgtacgttttggtccctcactttttcct 22049160  T
Q  181 ccgtttgtcaaataaatccct 201  Q
    | ||||| |||||||||||||    
T  22049159 ctgtttggcaaataaatccct 22049139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 200
Target Start/End: Complemental strand, 1010482 - 1010368
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    |||||| ||| || |||||||||||| ||||||||| ||||| |||||||| ||| || |||||||| |   ||||| ||||||||  |||  ||||||     
T  1010482 ggcttaataggtcatttggtcccttaattaatttcaagtttttattttggtcccataactaataaaactcatgttttggtccctcacgtttgtctccgtc 1010383  T
Q  186 tgtcaaataaatccc 200  Q
     ||||||||||||||    
T  1010382 agtcaaataaatccc 1010368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 113 - 198
Target Start/End: Original strand, 30857825 - 30857910
Alignment:
Q  113 ttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatc 198  Q
    ||||||| | |||||||||||||| |||||||||||||||     ||||| |||| ||| ||||| |||| |||||||||||||||    
T  30857825 ttaattttaagttttcattttggtcccacaattaataaaacgtatgttttggtccttcagattttcctccttttgtcaaataaatc 30857910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 215
Target Start/End: Original strand, 34894147 - 34894276
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    |||||||||||||  ||||||||||| ||||||||   ||||||||||||| ||  || |||||||||   | |||| |||||| |  |||  |||||||    
T  34894147 ggcttattagatccattggtcccttaattaatttccatttttcattttggtcccgtaagtaataaaaagtaccttttggtcccttagttttgtctccgtt 34894246  T
Q  186 tgtcaaataaatcccttccgtcaaataaat 215  Q
    || |||| ||||||| ||||||||| ||||    
T  34894247 tgccaaaaaaatcccatccgtcaaaaaaat 34894276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 9169582 - 9169650
Alignment:
Q  84 ttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaa 152  Q
    |||||||| ||| || ||||| |||||| ||||||||| ||||||||||| || ||| |||||||||||    
T  9169582 ttggcttaataggtcatttggccccttaattaatttcaagttttcattttagtcccataattaataaaa 9169650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 197
Target Start/End: Complemental strand, 27705406 - 27705323
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaat 197  Q
    |||||||| ||||||||||||||   |||||||||||||    |||||| |||||||| ||||| |||| |||| |||||||||    
T  27705406 taatttcaagttttcattttggtcatacaattaataaaacgtacgttttggtccctcagattttcctccttttgccaaataaat 27705323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 152
Target Start/End: Complemental strand, 8523864 - 8523798
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaa 152  Q
    |||||| ||| || ||||||||| || ||||||||| |||||||||||||| ||| || ||||||||    
T  8523864 ggcttaataggtcatttggtcccctaattaatttcaagttttcattttggtcccataactaataaaa 8523798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 131
Target Start/End: Complemental strand, 15941454 - 15941409
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcatt 131  Q
    |||||||||||||||||||||||| |  |||||||| |||||||||    
T  15941454 ggcttattagatcgtttggtccctcaaataatttcaagttttcatt 15941409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 153
Target Start/End: Original strand, 20538065 - 20538118
Alignment:
Q  100 tttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaa 153  Q
    ||||||||| || |||||||||  ||||||||||||| ||| ||||||||||||    
T  20538065 tttggtcccctaattaatttcaaattttcattttggtcccataattaataaaaa 20538118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 1009180 - 1009248
Alignment:
Q  84 ttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaa 152  Q
    |||||||| ||| || |||||| || || ||||||||| |||||||||||||| ||| || ||||||||    
T  1009180 ttggcttaataggtcatttggttccctaattaatttcaagttttcattttggttccataactaataaaa 1009248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 33172604 - 33172664
Alignment:
Q  139 cacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatcc 199  Q
    |||| |||||||||| |  |||||||||| ||| ||||| ||||||||| |||||||||||    
T  33172604 cacatttaataaaaaagatgttttagtccttcacatttttctccgtttgccaaataaatcc 33172664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 153
Target Start/End: Complemental strand, 34899069 - 34899002
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaa-tttcatgttttcattttggtaccacaattaataaaaa 153  Q
    |||||||||||||  ||||||||||| |||| |||||| ||||||||||||| ||| || |||||||||    
T  34899069 ggcttattagatccattggtcccttaattaattttcat-ttttcattttggtcccataagtaataaaaa 34899002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 3e-39; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 89 - 199
Target Start/End: Original strand, 27837921 - 27838031
Alignment:
Q  89 ttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgt 188  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||  |||| |||||||||     
T  27837921 ttattagatcgtttgatcccttatttaatttcatgttttcattttggtcccacaattaataaatatggcgttttagtccctcaccttttcctccgtttgc 27838020  T
Q  189 caaataaatcc 199  Q
    |||||||||||    
T  27838021 caaataaatcc 27838031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 86 - 199
Target Start/End: Complemental strand, 53614391 - 53614278
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||| |||||||||||||||||| ||||| |||  ||    
T  53614391 ggcttattagatcgtttggtcccttatttaatttcttgtttttattttggtcccacaattaataaaactggcgttttagtccctcacattttcctctatt 53614292  T
Q  186 tgtcaaataaatcc 199  Q
    || |||||||||||    
T  53614291 tgccaaataaatcc 53614278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 77 - 197
Target Start/End: Complemental strand, 26887682 - 26887562
Alignment:
Q  77 ttcttttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattt 176  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||  ||||||||||||| |||    
T  26887682 ttcttgttaggcttattagatcgtttggtcccttatttaatttcatgttttcatttttgtcccacaattaataaaaatggcaatttagtccctcatcttt 26887583  T
Q  177 tactccgtttgtcaaataaat 197  Q
    | ||| ||||  |||||||||    
T  26887582 tcctctgtttcccaaataaat 26887562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 35370911 - 35371019
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||| |||  |||| ||| |||    
T  35370911 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacaattaataaaaatggtgttttagtccttcaccttttcctctgtt 35371010  T
Q  186 tgtcaaata 194  Q
    |||||||||    
T  35371011 tgtcaaata 35371019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 80 - 199
Target Start/End: Complemental strand, 35372285 - 35372163
Alignment:
Q  80 ttttttggcttattagatcgtttggtccc---ttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattt 176  Q
    |||||||||||||||||||||||||||||   || |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||  |||    
T  35372285 ttttttggcttattagatcgtttggtccccccttttttaatttcatgttttcattttggtctcacaattaataaaaatggcgttttagtccctcaccttt 35372186  T
Q  177 tactccgtttgtcaaataaatcc 199  Q
    | ||| ||||| |||||||||||    
T  35372185 tcctctgtttgccaaataaatcc 35372163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 86 - 197
Target Start/End: Complemental strand, 10732247 - 10732136
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    |||||||||||||||||| |||||||||||||||  ||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||| |||||||    
T  10732247 ggcttattagatcgtttgatcccttatttaatttattgttttcattttggtcccataattaataaaaatggcgttttagtccctcacattttcctccgtt 10732148  T
Q  186 tgtcaaataaat 197  Q
    |  |||||||||    
T  10732147 taccaaataaat 10732136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 81 - 200
Target Start/End: Original strand, 53612864 - 53612983
Alignment:
Q  81 tttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttact 180  Q
    |||||||||||||||| |||||  |||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||| ||||||| ||||| ||    
T  53612864 tttttggcttattagaacgtttaatcccttatttaatttcttgttttcattttggtcccataattaataaaaatggcgttttattccctcacattttcct 53612963  T
Q  181 ccgtttgtcaaataaatccc 200  Q
    | ||||| ||||||||||||    
T  53612964 ctgtttgccaaataaatccc 53612983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 86 - 200
Target Start/End: Original strand, 41263636 - 41263750
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||| |||||||||| |||| |||| |||| |||| |||||||    
T  41263636 ggcttattagatcgtttggtcccttatttaatttcatattttcattttggtcccacatttattaaaaatggcattttggtccgtcatctttttctccgtt 41263735  T
Q  186 tgtcaaataaatccc 200  Q
    |||||| ||||||||    
T  41263736 tgtcaattaaatccc 41263750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 84 - 198
Target Start/End: Complemental strand, 41264773 - 41264659
Alignment:
Q  84 ttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccg 183  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||  |||||||  |||| |||||    
T  41264773 ttggcttattagattgtttggtcccttatttaatttcatgttttcattttggtctcacatttaataaaaatggcgttttgatccctcacctttttctccg 41264674  T
Q  184 tttgtcaaataaatc 198  Q
    |||| ||||||||||    
T  41264673 tttgccaaataaatc 41264659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 81 - 200
Target Start/End: Original strand, 10730878 - 10730997
Alignment:
Q  81 tttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttact 180  Q
    |||| |||||||| ||||||||| ||||||||| |||||| ||||||||||||||| ||| |||||||||||||||| |||| |||| |||  |||| ||    
T  10730878 ttttaggcttattggatcgtttgatcccttattcaatttcttgttttcattttggtcccataattaataaaaatggcattttggtccttcacttttttct 10730977  T
Q  181 ccgtttgtcaaataaatccc 200  Q
    ||||||| ||||||||||||    
T  10730978 ccgtttgccaaataaatccc 10730997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 86 - 199
Target Start/End: Original strand, 26886270 - 26886383
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||   ||||||||||||||||| |||||  |||||||  |||  ||| |||    
T  26886270 ggcttattagattgtttggtcccttatttaatttcatattttcattttggtctaacaattaataaaaatggtgttttgatccctcacgtttgtctctgtt 26886369  T
Q  186 tgtcaaataaatcc 199  Q
    || |||||||||||    
T  26886370 tgccaaataaatcc 26886383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 83 - 211
Target Start/End: Complemental strand, 3817384 - 3817256
Alignment:
Q  83 tttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactcc 182  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||||||||| ||| | ||||||||| || ||  |||||||||||  |||| |  |    
T  3817384 tttggcttattagatcgtttggtcccctaactaatttcatgttttcattttggtcccatatttaataaaagtgtcgaattagtccctcaacttttgcgac 3817285  T
Q  183 gtttgtcaaataaatcccttccgtcaaat 211  Q
    ||||| |||| |||||| ||| |||||||    
T  3817284 gtttgccaaaaaaatcctttctgtcaaat 3817256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 86 - 213
Target Start/End: Complemental strand, 42686263 - 42686136
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    ||||||||||||| |||| |||||||  |||||  ||||||| |||||| | | |||||||||||||  ||| |||||||||||||  |||| ||| |||    
T  42686263 ggcttattagatcatttgatcccttaaataattctatgtttttattttgatcctacaattaataaaacaggcattttagtccctcacttttttctctgtt 42686164  T
Q  186 tgtcaaataaatcccttccgtcaaataa 213  Q
    ||||||||||||| |||| |||||||||    
T  42686163 tgtcaaataaatctcttcagtcaaataa 42686136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 114 - 198
Target Start/End: Complemental strand, 18458747 - 18458663
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatc 198  Q
    |||||||| ||||| |||||||| ||||||||||||||| | ||||||||||||||||  |||| ||||||||| ||||||||||    
T  18458747 taatttcaagtttttattttggtcccacaattaataaaacttgcgttttagtccctcactttttcctccgtttgccaaataaatc 18458663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 86 - 198
Target Start/End: Complemental strand, 50810952 - 50810840
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    |||||| ||||||  |||||||||||  ||||||||  ||||||||||||| ||| |||||||||||    |||||||||||||||| |||| |||||||    
T  50810952 ggcttaatagatccattggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcattttttcctccgtt 50810853  T
Q  186 tgtcaaataaatc 198  Q
    || ||||||||||    
T  50810852 tgccaaataaatc 50810840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 86 - 198
Target Start/End: Original strand, 50864912 - 50865024
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    |||||| ||||||  |||||||||||  ||||||||  ||||||||||||| ||| |||||||||||    |||||||||||||||| |||| |||||||    
T  50864912 ggcttaatagatccattggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcattttttcctccgtt 50865011  T
Q  186 tgtcaaataaatc 198  Q
    || ||||||||||    
T  50865012 tgccaaataaatc 50865024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 80 - 210
Target Start/End: Original strand, 37735298 - 37735428
Alignment:
Q  80 ttttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttac 179  Q
    ||||| |||||||| ||||  ||||||| |||  |||||| | |||||||||||||| ||| |||||||||||     ||||||||||||||| |||| |    
T  37735298 tttttaggcttatttgatccattggtcctttaaataattttaagttttcattttggtcccataattaataaaacgtatgttttagtccctcatttttttc 37735397  T
Q  180 tccgtttgtcaaataaatcccttccgtcaaa 210  Q
    | ||||||||||||||||| | |||||||||    
T  37735398 ttcgtttgtcaaataaatctcatccgtcaaa 37735428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 82 - 171
Target Start/End: Original strand, 3811521 - 3811610
Alignment:
Q  82 ttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctca 171  Q
    |||||||||||||||||||||||| || ||  ||||||||||||||||||||||| ||| | ||||||||| || ||  |||||||||||    
T  3811521 ttttggcttattagatcgtttggtaccctaactaatttcatgttttcattttggtcccatatttaataaaagtgtcgaattagtccctca 3811610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 104 - 196
Target Start/End: Complemental strand, 37736181 - 37736089
Alignment:
Q  104 gtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaa 196  Q
    ||||||||  |||||||||||||||||||||||  ||||||||||||||    |||||||||||||||  |||| ||||||||| ||||||||    
T  37736181 gtcccttaaataatttcatgttttcattttggtctcacaattaataaaacgtacgttttagtccctcacttttttctccgtttgccaaataaa 37736089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 198
Target Start/End: Original strand, 50809419 - 50809531
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    |||||| ||||||  |||||||||||  ||||||||  ||||||||||||| ||| |||||||||||    |||||||||||||||  |||| |||||||    
T  50809419 ggcttaatagatctattggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcactttttcctccgtt 50809518  T
Q  186 tgtcaaataaatc 198  Q
    || ||||||||||    
T  50809519 tgccaaataaatc 50809531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 198
Target Start/End: Complemental strand, 50866443 - 50866331
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    |||||| ||||||  |||||||||||  ||||||||  ||||||||||||| ||| |||||||||||    |||||||||||||||  |||| |||||||    
T  50866443 ggcttaatagatctattggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcactttttcctccgtt 50866344  T
Q  186 tgtcaaataaatc 198  Q
    || ||||||||||    
T  50866343 tgccaaataaatc 50866331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 80 - 201
Target Start/End: Original strand, 53420311 - 53420429
Alignment:
Q  80 ttttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttac 179  Q
    |||||||||||||| ||||   ||||||| ||  ||||||||| ||||||||||||| | |||||||||||||    |||||| ||||||||  |||| |    
T  53420311 ttttttggcttatttgatc---tggtcccctaactaatttcatattttcattttggtcctacaattaataaaacgtacgttttggtccctcacttttttc 53420407  T
Q  180 tccgtttgtcaaataaatccct 201  Q
    ||||||| ||||||||||||||    
T  53420408 tccgtttatcaaataaatccct 53420429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 86 - 195
Target Start/End: Original strand, 40244185 - 40244294
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    |||||||| ||||  |||||||||||  |||||||| ||||||||||||||  ||||||||||||||    | |||| |||||||| ||||| |||||||    
T  40244185 ggcttatttgatccattggtcccttaaataatttcaagttttcattttggtctcacaattaataaaacgtacattttggtccctcaaattttcctccgtt 40244284  T
Q  186 tgtcaaataa 195  Q
    || |||||||    
T  40244285 tgccaaataa 40244294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 86 - 200
Target Start/End: Original strand, 38240904 - 38241018
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    |||||||| ||||  ||||||||||   ||||||||  |||| |||||||| |||||||||||||||    ||||| ||||| ||| ||||| |||||||    
T  38240904 ggcttatttgatccattggtcccttgaataatttcaaatttttattttggtcccacaattaataaaacgtacgtttaagtccttcagattttcctccgtt 38241003  T
Q  186 tgtcaaataaatccc 200  Q
    || ||||||||||||    
T  38241004 tgccaaataaatccc 38241018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 199
Target Start/End: Original strand, 18197173 - 18197258
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatcc 199  Q
    ||||||||  ||||||||||||| |||||||||||||||    | |||| ||||||||| |||| ||||||||| |||||||||||    
T  18197173 taatttcaaattttcattttggtcccacaattaataaaacgtaccttttggtccctcattttttcctccgtttgccaaataaatcc 18197258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 199
Target Start/End: Original strand, 40364345 - 40364430
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatcc 199  Q
    |||||||| |||||||||||||| | | |||||||||||    ||||| |||||||||| |||| ||||||||| |||||||||||    
T  40364345 taatttcaagttttcattttggtcctaaaattaataaaatgtacgtttaagtccctcatttttttctccgtttgccaaataaatcc 40364430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 113 - 213
Target Start/End: Complemental strand, 53421852 - 53421752
Alignment:
Q  113 ttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatcccttccgtcaaata 212  Q
    ||||||| | ||||||||||| || | |||||||||||||    |||||| ||||||||  |||| ||| ||||| ||||||||||||||| ||||||||    
T  53421852 ttaattttacgttttcattttagtcctacaattaataaaacgtacgttttggtccctcacttttttctctgtttgccaaataaatcccttctgtcaaata 53421753  T
Q  213 a 213  Q
    |    
T  53421752 a 53421752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 200
Target Start/End: Original strand, 34818111 - 34818198
Alignment:
Q  113 ttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatccc 200  Q
    ||||||||| |||||||||||||| |||||||||||||||     | ||| |||||||| ||||| |||| |||| ||||||||||||    
T  34818111 ttaatttcaagttttcattttggtcccacaattaataaaacgtatgatttggtccctcagattttcctccatttgccaaataaatccc 34818198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 152
Target Start/End: Complemental strand, 36176598 - 36176559
Alignment:
Q  113 ttaatttcatgttttcattttggtaccacaattaataaaa 152  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  36176598 ttaatttcatgttttcattttggtcccacaattaataaaa 36176559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 114 - 199
Target Start/End: Original strand, 42684902 - 42684987
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatcc 199  Q
    |||||| | |||||||||||||| ||| ||| ||||||| || |||||||||||||||| |||| ||  ||||  |||||||||||    
T  42684902 taattttaagttttcattttggttccataatgaataaaactgacgttttagtccctcatttttttctatgtttaccaaataaatcc 42684987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 51990461 - 51990534
Alignment:
Q  13 aatatatatagtgaaggtaaaagtaatgttctcannnnnnn-gttggagaaaattattgtccttgttctttttt 85  Q
    |||||||||| |||||||||| |||| |||||||        ||||||||||||||||||||||||||||||||    
T  51990461 aatatatatattgaaggtaaacgtaacgttctcattttttttgttggagaaaattattgtccttgttctttttt 51990534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 199
Target Start/End: Original strand, 3208520 - 3208595
Alignment:
Q  124 ttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatcc 199  Q
    ||||||||||||| ||| |||||||||||    ||||||  ||||| || |||| |||||||||||||||||||||    
T  3208520 ttttcattttggtcccataattaataaaacgtacgttttgatcccttattttttcctccgtttgtcaaataaatcc 3208595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 177
Target Start/End: Original strand, 18442278 - 18442341
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatatttt 177  Q
    |||||||| |||||||||||||| |||||||||||||||    ||||||||||| |||| ||||    
T  18442278 taatttcaagttttcattttggtcccacaattaataaaacccacgttttagtccatcatttttt 18442341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 177
Target Start/End: Original strand, 19487352 - 19487415
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatatttt 177  Q
    |||||||| |||||||||||||| |||||||||||||||    ||||||||||| |||| ||||    
T  19487352 taatttcaagttttcattttggtcccacaattaataaaacccacgttttagtccatcatttttt 19487415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 27841783 - 27841717
Alignment:
Q  131 tttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaat 197  Q
    |||||| ||||||||||||||||| || ||||||||| |||  ||||  | ||||||||||||||||    
T  27841783 tttggtcccacaattaataaaaatagctttttagtccttcaccttttctttcgtttgtcaaataaat 27841717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 51952154 - 51952083
Alignment:
Q  14 atatatatagtgaaggtaaaagtaatgttctcannnnnnngttggagaaaattattgtccttgttctttttt 85  Q
    |||||||||||||| |||||  ||| |||||||       ||||||||||||||||||||||||||| ||||    
T  51952154 atatatatagtgaaagtaaacataacgttctcatttttttgttggagaaaattattgtccttgttctctttt 51952083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 210
Target Start/End: Original strand, 41544675 - 41544784
Alignment:
Q  101 ttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatccc 200  Q
    ||||||| |||  |||||||| |||||||||||||| | | |||||||| ||    ||||| |||||||||  |||| ||| ||||| |||||||||||     
T  41544675 ttggtccattaaataatttcaagttttcattttggtcctataattaatataacgtacgtttaagtccctcactttttcctctgtttgccaaataaatcca 41544774  T
Q  201 ttccgtcaaa 210  Q
     |||||||||    
T  41544775 atccgtcaaa 41544784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 199
Target Start/End: Complemental strand, 53194960 - 53194875
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatcc 199  Q
    |||||||| |||||||||||||| ||| |||||||||||    |||||| ||||||||  |||| |||  |||| |||||||||||    
T  53194960 taatttcaagttttcattttggtcccataattaataaaacgtacgttttggtccctcactttttcctctatttgccaaataaatcc 53194875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 12108083 - 12108035
Alignment:
Q  104 gtcccttatttaatttcatgttttcattttggtaccacaattaataaaa 152  Q
    ||||||||  |||||||| |||||||||||||| |||||| ||||||||    
T  12108083 gtcccttaaataatttcaagttttcattttggtcccacaactaataaaa 12108035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 72; Significance: 9e-33; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 86 - 213
Target Start/End: Original strand, 61849 - 61976
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    ||||||||||| ||||||||||| ||  |||||||||||||||||||||||  || ||||||||||||||||||||||||||||||| ||||  ||||||    
T  61849 ggcttattagaacgtttggtcccctaaataatttcatgttttcattttggtctcataattaataaaaatggcgttttagtccctcatcttttcttccgtt 61948  T
Q  186 tgtcaaataaatcccttccgtcaaataa 213  Q
    || ||||||||||  ||| |||||||||    
T  61949 tgccaaataaatcttttctgtcaaataa 61976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 80 - 201
Target Start/End: Complemental strand, 63255 - 63134
Alignment:
Q  80 ttttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttac 179  Q
    ||||| || |||||||||||||||||||   |  ||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||| |    
T  63255 tttttaggtttattagatcgtttggtcctccaaataatttcgtgttttcattttggtcccacaattaataaagatggcgttttagtccctcacatttttc 63156  T
Q  180 tccgtttgtcaaataaatccct 201  Q
    |||||||| |||||||||||||    
T  63155 tccgtttgccaaataaatccct 63134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 89 - 199
Target Start/End: Complemental strand, 858 - 750
Alignment:
Q  89 ttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgt 188  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||| || |||||||||||||||||||| ||| ||| || ||||| |||||||||     
T  858 ttattagatcgtttggtcctttatttaatttcatgtttttattttggtccctcaattaataaaaatggcgttatagaccc-ca-attttcctccgtttgc 761  T
Q  189 caaataaatcc 199  Q
    || ||||||||    
T  760 catataaatcc 750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 114 - 210
Target Start/End: Original strand, 18838 - 18934
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatcccttccgtcaaa 210  Q
    |||||| | |||||||||||||| ||| | ||||||||| |   ||||||||||||||  |||||||||||||| |||||||||||| |||||||||    
T  18838 taattttaagttttcattttggtcccatatttaataaaacttatgttttagtccctcactttttactccgtttgccaaataaatcccatccgtcaaa 18934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 198
Target Start/End: Complemental strand, 54303 - 54191
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    |||||||| ||||  ||||||||| |  |||||||| ||||| ||||||||  ||||||||||||||   ||||||| |||||||| ||||| |||||||    
T  54303 ggcttatttgatccattggtccctcaaataatttcaagttttaattttggtcgcacaattaataaaacgtgcgttttggtccctcaaattttcctccgtt 54204  T
Q  186 tgtcaaataaatc 198  Q
    || ||||||||||    
T  54203 tgccaaataaatc 54191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 113 - 200
Target Start/End: Original strand, 52617 - 52704
Alignment:
Q  113 ttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatccc 200  Q
    ||||||||| |||||||||||| | |||||||||||||||    |||||| |||||||| ||||| ||||||||| ||||||||||||    
T  52617 ttaatttcaagttttcattttgatcccacaattaataaaatgtacgttttggtccctcagatttttctccgtttgccaaataaatccc 52704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 80 - 199
Target Start/End: Original strand, 123961 - 124080
Alignment:
Q  80 ttttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttac 179  Q
    |||||||||||||| ||||   |||||| | |  |||||||| |||||||||||||| |||||||||||||||    | |||| ||||||||  |||| |    
T  123961 ttttttggcttatttgatccaatggtccttcaaataatttcaagttttcattttggtcccacaattaataaaacgtacattttggtccctcactttttcc 124060  T
Q  180 tccgtttgtcaaataaatcc 199  Q
    || ||||| |||||||||||    
T  124061 tctgtttgccaaataaatcc 124080  T

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Target: scaffold0031; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 114 - 199
Target Start/End: Complemental strand, 125323 - 125238
Alignment:
Q  114 taatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtttgtcaaataaatcc 199  Q
    ||||||||  ||||||||||||| |||||||||||||||    | |||| ||||||||  |||| ||||||||| |||||||||||    
T  125323 taatttcaaattttcattttggtcccacaattaataaaacgtaccttttggtccctcactttttcctccgtttgccaaataaatcc 125238  T

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Target: scaffold0011 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 201
Target Start/End: Original strand, 127431 - 127546
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    |||||| ||| || ||||||||| || ||||||||| |||||| ||||||| ||| || |||||||| |   ||||| ||||||||| |||  ||||||     
T  127431 ggcttaataggtcatttggtcccctaattaatttcaagttttcgttttggtcccataactaataaaactcatgttttggtccctcatgtttgcctccgtc 127530  T
Q  186 tgtcaaataaatccct 201  Q
     |||||||||||||||    
T  127531 ggtcaaataaatccct 127546  T

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Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 210
Target Start/End: Complemental strand, 128709 - 128585
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaatggcgttttagtccctcatattttactccgtt 185  Q
    |||||| ||| || |||||||||||| ||||||| | |||||||||||||| | |  | |||||||| |   ||||| |||||| | ||||  ||||||     
T  128709 ggcttaataggtcatttggtcccttaattaattttaagttttcattttggtcctattactaataaaactcatgttttggtcccttaaatttgtctccgtc 128610  T
Q  186 tgtcaaataaatcccttccgtcaaa 210  Q
     |||||| |||||| ||||||||||    
T  128609 ggtcaaaaaaatcctttccgtcaaa 128585  T

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Target: scaffold1152 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 153
Target Start/End: Complemental strand, 2593 - 2527
Alignment:
Q  86 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaa 153  Q
    |||||||||||||  ||||||||| | ||||||||   ||||||||||||| ||||||||||||||||    
T  2593 ggcttattagatcaattggtccctcaattaatttcca-ttttcattttggtcccacaattaataaaaa 2527  T

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Target: scaffold0034 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 109847 - 109797
Alignment:
Q  102 tggtcccttatttaatttcatgttttcattttggtaccacaattaataaaa 152  Q
    ||||||||||  |||||||| |||||||||||||| | |||||||||||||    
T  109847 tggtcccttaaataatttcaagttttcattttggtcctacaattaataaaa 109797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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