View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19556_low_41 (Length: 229)

Name: NF19556_low_41
Description: NF19556
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19556_low_41
NF19556_low_41
[»] chr1 (36 HSPs)
chr1 (15-141)||(23569807-23569935)
chr1 (10-143)||(26441635-26441770)
chr1 (10-124)||(16265052-16265166)
chr1 (10-124)||(16266181-16266295)
chr1 (16-141)||(3529176-3529303)
chr1 (55-143)||(43680067-43680157)
chr1 (10-124)||(24982370-24982484)
chr1 (10-143)||(3898699-3898834)
chr1 (10-142)||(25531777-25531911)
chr1 (10-141)||(16751581-16751714)
chr1 (54-141)||(50539260-50539349)
chr1 (54-141)||(52378989-52379078)
chr1 (10-126)||(31971515-31971631)
chr1 (10-121)||(38738106-38738217)
chr1 (58-124)||(47222233-47222299)
chr1 (54-141)||(48219814-48219903)
chr1 (54-127)||(29161858-29161931)
chr1 (54-148)||(48264983-48265079)
chr1 (54-126)||(39354436-39354508)
chr1 (58-121)||(4605020-4605083)
chr1 (55-126)||(32988522-32988593)
chr1 (57-141)||(48376158-48376244)
chr1 (10-141)||(30529178-30529311)
chr1 (10-141)||(32565746-32565879)
chr1 (54-149)||(50876356-50876453)
chr1 (54-127)||(38458745-38458818)
chr1 (10-115)||(45234973-45235078)
chr1 (58-140)||(49805428-49805512)
chr1 (54-126)||(42708521-42708593)
chr1 (55-115)||(50481306-50481366)
chr1 (54-101)||(41501780-41501827)
chr1 (10-121)||(14075757-14075867)
chr1 (55-121)||(21034703-21034769)
chr1 (16-121)||(23330474-23330579)
chr1 (10-127)||(37281108-37281225)
chr1 (58-126)||(1849716-1849784)
[»] chr6 (17 HSPs)
chr6 (10-141)||(33121542-33121675)
chr6 (54-141)||(25435412-25435500)
chr6 (56-124)||(25163183-25163251)
chr6 (10-141)||(643559-643692)
chr6 (55-145)||(31854814-31854906)
chr6 (10-121)||(13207081-13207192)
chr6 (54-143)||(7098045-7098132)
chr6 (55-126)||(22020293-22020364)
chr6 (54-145)||(11114561-11114654)
chr6 (54-141)||(24150741-24150830)
chr6 (54-141)||(18991904-18991993)
chr6 (54-116)||(29986330-29986392)
chr6 (54-126)||(8796067-8796139)
chr6 (54-126)||(29403661-29403733)
chr6 (54-141)||(30237165-30237255)
chr6 (54-115)||(19068940-19069001)
chr6 (54-126)||(20662231-20662303)
[»] chr3 (41 HSPs)
chr3 (10-127)||(49057872-49057989)
chr3 (10-143)||(4238748-4238883)
chr3 (10-124)||(17052883-17052997)
chr3 (10-124)||(10435153-10435267)
chr3 (54-141)||(43137851-43137940)
chr3 (10-143)||(32951264-32951399)
chr3 (55-141)||(18659052-18659140)
chr3 (55-143)||(21906994-21907084)
chr3 (10-148)||(25097315-25097455)
chr3 (54-127)||(46483567-46483640)
chr3 (54-126)||(7459992-7460064)
chr3 (10-143)||(29728226-29728361)
chr3 (56-141)||(34827322-34827409)
chr3 (55-144)||(45167296-45167387)
chr3 (10-121)||(3547549-3547659)
chr3 (10-121)||(9145524-9145635)
chr3 (142-197)||(44545030-44545085)
chr3 (54-141)||(1327311-1327400)
chr3 (54-141)||(38492052-38492141)
chr3 (10-104)||(47638094-47638188)
chr3 (55-112)||(36665050-36665107)
chr3 (56-121)||(45093742-45093807)
chr3 (54-126)||(8559177-8559249)
chr3 (54-143)||(27848950-27849041)
chr3 (54-126)||(38833681-38833753)
chr3 (54-126)||(51062407-51062479)
chr3 (54-126)||(51392464-51392536)
chr3 (58-126)||(54840304-54840372)
chr3 (54-125)||(10571316-10571387)
chr3 (54-121)||(28690538-28690605)
chr3 (10-121)||(35717983-35718094)
chr3 (54-142)||(37832899-37832989)
chr3 (10-92)||(7671441-7671523)
chr3 (15-141)||(15503025-15503151)
chr3 (54-116)||(32285348-32285410)
chr3 (54-142)||(48707015-48707105)
chr3 (57-141)||(52668660-52668746)
chr3 (10-115)||(10437310-10437415)
chr3 (55-116)||(53066401-53066462)
chr3 (63-115)||(52550797-52550849)
chr3 (66-124)||(48143784-48143842)
[»] chr2 (36 HSPs)
chr2 (10-141)||(32776028-32776161)
chr2 (55-143)||(40598126-40598216)
chr2 (16-127)||(41463651-41463762)
chr2 (10-141)||(38963519-38963652)
chr2 (10-126)||(30708745-30708861)
chr2 (54-121)||(40898662-40898729)
chr2 (10-141)||(7443019-7443152)
chr2 (15-121)||(38137664-38137769)
chr2 (55-141)||(34826912-34827000)
chr2 (54-126)||(16941983-16942055)
chr2 (54-126)||(17012648-17012720)
chr2 (54-126)||(36199123-36199195)
chr2 (10-121)||(39418148-39418259)
chr2 (54-141)||(3987404-3987493)
chr2 (54-141)||(14372077-14372166)
chr2 (54-141)||(23671376-23671465)
chr2 (10-147)||(4045361-4045500)
chr2 (55-106)||(43925254-43925305)
chr2 (55-126)||(44330401-44330472)
chr2 (54-141)||(18718239-18718328)
chr2 (68-126)||(38588075-38588133)
chr2 (54-141)||(40425421-40425510)
chr2 (54-141)||(42038523-42038612)
chr2 (15-121)||(42951362-42951468)
chr2 (54-127)||(24283130-24283203)
chr2 (55-141)||(27559575-27559663)
chr2 (58-126)||(14707710-14707778)
chr2 (10-141)||(4045850-4045983)
chr2 (10-92)||(30776321-30776403)
chr2 (54-141)||(41172929-41173018)
chr2 (16-126)||(44283413-44283523)
chr2 (10-101)||(332318-332410)
chr2 (54-126)||(20517436-20517508)
chr2 (54-141)||(9877255-9877344)
chr2 (15-94)||(7106327-7106406)
chr2 (54-115)||(13399277-13399338)
[»] chr7 (28 HSPs)
chr7 (55-143)||(37231737-37231827)
chr7 (10-143)||(35500875-35501010)
chr7 (10-116)||(34478139-34478245)
chr7 (55-124)||(36643181-36643250)
chr7 (10-143)||(10464243-10464378)
chr7 (10-127)||(21392034-21392151)
chr7 (10-127)||(47537939-47538056)
chr7 (10-141)||(31466486-31466619)
chr7 (54-141)||(36819696-36819785)
chr7 (54-143)||(19072767-19072858)
chr7 (54-143)||(36905524-36905615)
chr7 (54-126)||(42086810-42086882)
chr7 (10-126)||(42834420-42834536)
chr7 (10-101)||(18795268-18795359)
chr7 (15-126)||(23474102-23474213)
chr7 (10-92)||(31110673-31110755)
chr7 (10-116)||(31497832-31497937)
chr7 (54-141)||(36859380-36859469)
chr7 (10-137)||(48531326-48531455)
chr7 (54-126)||(37951117-37951189)
chr7 (54-126)||(44479892-44479964)
chr7 (54-142)||(47080979-47081069)
chr7 (54-141)||(2400285-2400374)
chr7 (54-141)||(28185580-28185669)
chr7 (54-141)||(47713674-47713763)
chr7 (10-119)||(29770602-29770711)
chr7 (54-141)||(32619114-32619203)
chr7 (55-93)||(39982287-39982325)
[»] chr4 (47 HSPs)
chr4 (10-124)||(6923068-6923182)
chr4 (10-124)||(25644378-25644492)
chr4 (10-124)||(19525842-19525956)
chr4 (10-127)||(19170667-19170784)
chr4 (10-126)||(7738947-7739063)
chr4 (15-115)||(50033048-50033148)
chr4 (54-141)||(28166274-28166363)
chr4 (54-141)||(45198512-45198601)
chr4 (15-121)||(50035561-50035667)
chr4 (55-141)||(5735271-5735359)
chr4 (54-143)||(4209361-4209452)
chr4 (55-126)||(19634021-19634092)
chr4 (10-121)||(19731294-19731404)
chr4 (54-141)||(3901311-3901400)
chr4 (54-141)||(26205876-26205965)
chr4 (54-141)||(46212522-46212611)
chr4 (54-141)||(46803631-46803720)
chr4 (10-116)||(55014289-55014395)
chr4 (54-127)||(19652427-19652500)
chr4 (54-144)||(39786528-39786620)
chr4 (10-126)||(3443515-3443631)
chr4 (54-126)||(37688205-37688277)
chr4 (55-143)||(4264132-4264222)
chr4 (54-141)||(3442516-3442605)
chr4 (54-141)||(18360145-18360234)
chr4 (54-141)||(21859091-21859180)
chr4 (54-141)||(21914954-21915043)
chr4 (54-141)||(36602694-36602783)
chr4 (54-141)||(47579287-47579376)
chr4 (54-127)||(1377048-1377121)
chr4 (55-112)||(19631339-19631396)
chr4 (15-115)||(5123290-5123390)
chr4 (54-126)||(20678759-20678831)
chr4 (54-126)||(28152008-28152080)
chr4 (54-142)||(23255934-23256024)
chr4 (59-113)||(51737130-51737184)
chr4 (10-116)||(53568381-53568487)
chr4 (55-141)||(5744256-5744344)
chr4 (54-144)||(6494585-6494677)
chr4 (54-127)||(39260303-39260376)
chr4 (10-127)||(42187107-42187224)
chr4 (10-111)||(55997146-55997247)
chr4 (15-115)||(23603780-23603880)
chr4 (55-127)||(55190887-55190959)
chr4 (54-92)||(49768496-49768534)
chr4 (10-121)||(26659862-26659972)
chr4 (56-93)||(27976744-27976781)
[»] chr5 (34 HSPs)
chr5 (55-124)||(4300005-4300074)
chr5 (55-123)||(16048103-16048171)
chr5 (55-143)||(39405762-39405852)
chr5 (10-124)||(970157-970271)
chr5 (58-124)||(43067248-43067314)
chr5 (54-142)||(37516143-37516233)
chr5 (10-141)||(41411285-41411419)
chr5 (54-142)||(42148306-42148396)
chr5 (54-116)||(19889681-19889743)
chr5 (10-124)||(22613837-22613951)
chr5 (10-127)||(37843703-37843820)
chr5 (10-142)||(1830653-1830788)
chr5 (54-126)||(14475406-14475478)
chr5 (15-143)||(30779879-30780008)
chr5 (10-141)||(40316121-40316255)
chr5 (54-121)||(42421707-42421774)
chr5 (10-141)||(4924966-4925099)
chr5 (10-141)||(5213050-5213183)
chr5 (10-141)||(35290286-35290419)
chr5 (54-141)||(35448169-35448258)
chr5 (10-115)||(19868814-19868918)
chr5 (54-127)||(43517232-43517305)
chr5 (54-142)||(23988578-23988668)
chr5 (54-141)||(29627268-29627357)
chr5 (54-141)||(38697963-38698052)
chr5 (54-141)||(39894781-39894870)
chr5 (54-141)||(40512852-40512941)
chr5 (54-140)||(5364421-5364509)
chr5 (57-126)||(32334815-32334884)
chr5 (10-115)||(39036438-39036543)
chr5 (54-126)||(32002186-32002258)
chr5 (10-121)||(25563522-25563633)
chr5 (55-121)||(15268132-15268198)
chr5 (10-141)||(2863954-2864087)
[»] chr8 (30 HSPs)
chr8 (10-124)||(31127933-31128047)
chr8 (10-127)||(13138260-13138377)
chr8 (55-124)||(18809295-18809364)
chr8 (10-142)||(29790941-29791075)
chr8 (10-141)||(8351008-8351141)
chr8 (15-121)||(44123695-44123801)
chr8 (10-115)||(12893559-12893664)
chr8 (10-142)||(1580893-1581027)
chr8 (55-143)||(11854522-11854612)
chr8 (54-141)||(3293274-3293363)
chr8 (54-141)||(40013651-40013740)
chr8 (10-127)||(6470861-6470978)
chr8 (55-141)||(38845200-38845288)
chr8 (10-126)||(45253766-45253882)
chr8 (15-127)||(14522396-14522508)
chr8 (54-125)||(23764623-23764695)
chr8 (54-143)||(45081810-45081901)
chr8 (54-141)||(30289924-30290013)
chr8 (54-141)||(30380530-30380619)
chr8 (58-126)||(43066144-43066212)
chr8 (54-113)||(886239-886298)
chr8 (55-126)||(38739674-38739745)
chr8 (54-141)||(2805648-2805737)
chr8 (54-124)||(25256353-25256423)
chr8 (55-141)||(37709899-37709987)
chr8 (54-92)||(23248828-23248866)
chr8 (54-115)||(10658006-10658067)
chr8 (54-126)||(2986356-2986427)
chr8 (54-141)||(39361128-39361214)
chr8 (58-121)||(14847232-14847295)
[»] scaffold0366 (2 HSPs)
scaffold0366 (54-143)||(14057-14148)
scaffold0366 (54-143)||(10391-10482)
[»] scaffold0051 (1 HSPs)
scaffold0051 (54-144)||(41389-41481)
[»] scaffold0459 (1 HSPs)
scaffold0459 (54-143)||(12750-12841)
[»] scaffold0111 (1 HSPs)
scaffold0111 (10-121)||(38488-38599)
[»] scaffold0092 (1 HSPs)
scaffold0092 (54-141)||(44280-44369)
[»] scaffold0340 (1 HSPs)
scaffold0340 (58-127)||(14361-14430)
[»] scaffold0027 (1 HSPs)
scaffold0027 (60-142)||(117320-117404)


Alignment Details
Target: chr1 (Bit Score: 74; Significance: 4e-34; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 15 - 141
Target Start/End: Original strand, 23569807 - 23569935
Alignment:
Q  15 gaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaact 114  Q
    |||||||||||| |||||||||||||||||        |||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||    
T  23569807 gaatatttttaaaatattaaattttcataattttttttggtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaact 23569906  T
Q  115 agatcatttatt--ggaacggagggagta 141  Q
    ||||||||||||  || ||||||||||||    
T  23569907 agatcatttattgagggacggagggagta 23569935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 143
Target Start/End: Complemental strand, 26441770 - 26441635
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| ||||||| |||||||||          |||||||||||| ||||||||||||||||||||||||| |||||||| |||||||    
T  26441770 tcgatgaatatttttaaaatattaagttttcataattttttttaatagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagt 26441671  T
Q  110 caactagatcattta--ttggaacggagggagtaat 143  Q
    |||||||||||||||   ||||||||||||||||||    
T  26441670 caactagatcatttaatatggaacggagggagtaat 26441635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 16265166 - 16265052
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| ||||||| |||||||||          |||||||||||| ||||||||||||||||||||||||| |||||||| |||||||    
T  16265166 tcgatgaatatttttaaaatattaagttttcataattttttttaatagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagt 16265067  T
Q  110 caactagatcattta 124  Q
    |||||||||||||||    
T  16265066 caactagatcattta 16265052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 16266295 - 16266181
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| ||||||| |||||||||          |||||||||||| ||||||||||||||||||||||||| |||||||| |||||||    
T  16266295 tcgatgaatatttttaaaatattaagttttcataaatttttttaatagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagt 16266196  T
Q  110 caactagatcattta 124  Q
    |||||||||||||||    
T  16266195 caactagatcattta 16266181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 16 - 141
Target Start/End: Complemental strand, 3529303 - 3529176
Alignment:
Q  16 aatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaacta 115  Q
    ||||||||||| |||||||||||||||||         ||||||||||||| ||||||||||||||||||||||||| |||||||| ||  |||||||||    
T  3529303 aatatttttaaaatattaaattttcataaattgttttagtagagaattgaatatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaacta 3529204  T
Q  116 gatcatttatt--ggaacggagggagta 141  Q
    ||||||| |||  || ||||||||||||    
T  3529203 gatcattaattaagggacggagggagta 3529176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 55 - 143
Target Start/End: Complemental strand, 43680157 - 43680067
Alignment:
Q  55 tagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcattta--ttggaacggagggagtaat 143  Q
    |||||||||||| ||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||   ||| ||||||||||||||    
T  43680157 tagagaattgaagatatcaaagataaaacatatgcattggtacgcgtgtcgaagtcaactagatcatttaatatgggacggagggagtaat 43680067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 24982484 - 24982370
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| ||||||| |||||||||          |||||||||||| |||||||| |||||||||||||||| |||||||| |||||||    
T  24982484 tcgatgaatatttttaaaatattaagttttcataattttttttaatagagaattgaagatatcaaatataaaacatatgcattggtacgtgtgtcgaagt 24982385  T
Q  110 caactagatcattta 124  Q
    |||||||||||||||    
T  24982384 caactagatcattta 24982370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 10 - 143
Target Start/End: Original strand, 3898699 - 3898834
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| ||||||| |||||||||          |||| ||||||| ||||||||||||||||||||||||| |||||| | |||||||    
T  3898699 tcgatgaatatttttaaaatattaagttttcataattttttttaatagaaaattgaagatatcaaagataaaacatatgcattggtacgtctgtcgaagt 3898798  T
Q  110 caactagatcattta--ttggaacggagggagtaat 143  Q
    |||||||||||||||   ||| ||||||||||||||    
T  3898799 caactagatcatttaatatgggacggagggagtaat 3898834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 10 - 142
Target Start/End: Complemental strand, 25531911 - 25531777
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||| ||||         ||||||||||||| ||||||||||||||||||||||||| ||| |||| ||  |||    
T  25531911 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagt 25531812  T
Q  110 caactagatcatttatt--ggaacggagggagtaa 142  Q
    ||||||| |||||||||  || |||||||||||||    
T  25531811 caactaggtcatttatttagggacggagggagtaa 25531777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 141
Target Start/End: Original strand, 16751581 - 16751714
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||||||||         | |||||||| || ||||||||||||||||||||||||| |||||||| ||| |||    
T  16751581 tcgatgaatatttttaaaatattaaattttcataattgtgtttagaagagaattaaagatatcaaagataaaacatatgcattggtacgtgtgtcggagt 16751680  T
Q  110 caactagatcattta--ttggaacggagggagta 141  Q
    ||||||| |||| ||   ||||||||||||||||    
T  16751681 caactaggtcatctaatatggaacggagggagta 16751714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 50539349 - 50539260
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| ||  ||||||||||||||||||||  || ||||||||||||    
T  50539349 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttatttagggacggagggagta 50539260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 52379078 - 52378989
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| ||  ||||||||||||||||||||  || ||||||||||||    
T  52379078 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttatttagggacggagggagta 52378989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 126
Target Start/End: Original strand, 31971515 - 31971631
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||||||||         ||||||| ||||| ||||||||||||||||||||||||| |||| ||| ||  |||    
T  31971515 tcgatgaatatttttaaaatattaaattttcataattttttttagtagagagttgaatatatcaaagataaaacatatgcattggtacatgtgtcagagt 31971614  T
Q  110 caactagatcatttatt 126  Q
    |||||||||||| ||||    
T  31971615 caactagatcatctatt 31971631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 38738106 - 38738217
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||||||||          | |||||||||| ||||||||||||||||||||||||| |||||||| ||| |||    
T  38738106 tcgatgaatatttttaaaatattaaattttcataattttttttacttgagaattgaacatatcaaagataaaacatatgcattggtacgtgtgtcggagt 38738205  T
Q  110 caactagatcat 121  Q
    ||||||| ||||    
T  38738206 caactaggtcat 38738217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 58 - 124
Target Start/End: Complemental strand, 47222299 - 47222233
Alignment:
Q  58 agaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcattta 124  Q
    ||||||||| ||||||||||||||||||||||||| |||||||| ||| |||||||||| |||||||    
T  47222299 agaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaactaggtcattta 47222233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 54 - 141
Target Start/End: Original strand, 48219814 - 48219903
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| ||  |||||||||| |||||||||  || ||||||||||||    
T  48219814 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 48219903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 29161931 - 29161858
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttattg 127  Q
    ||||| ||||||| ||||||||||||||||||||| ||| |||||||| ||  |||||||||||||||||||||    
T  29161931 gtagaaaattgaagatatcaaagataaaacatatgaattggtacgtgtgtcagagtcaactagatcatttattg 29161858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 148
Target Start/End: Original strand, 48264983 - 48265079
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagtaattaata 148  Q
    ||||||||||||| |||| |||||||||||||||||||| ||| |||| ||  |||||||||| |||||||||  || |||||||||||||| ||||    
T  48264983 gtagagaattgaagatattaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtaatcaata 48265079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 39354436 - 39354508
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt 126  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| ||  |||||||||| |||||||||    
T  39354436 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatt 39354508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 58 - 121
Target Start/End: Complemental strand, 4605083 - 4605020
Alignment:
Q  58 agaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcat 121  Q
    |||||| || ||||||||||||||||||||||||| |||||||| ||| |||||||||||||||    
T  4605083 agaattaaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaactagatcat 4605020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 32988522 - 32988593
Alignment:
Q  55 tagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt 126  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||| ||  |||||||||| |||||||||    
T  32988522 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatt 32988593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 57 - 141
Target Start/End: Complemental strand, 48376244 - 48376158
Alignment:
Q  57 gagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttattg--gaacggagggagta 141  Q
    |||||||||| ||||||||||||||||||||||||| |||||||| || |||| |||||| |||| |||||  |||| |||||||||    
T  48376244 gagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcaaagttaactaggtcatctattgaagaacagagggagta 48376158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 141
Target Start/End: Original strand, 30529178 - 30529311
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||| ||||         ||||| ||||||| ||||| ||||||||||||||||||| |||| ||| ||  |||    
T  30529178 tcgatgaatatttttaaaatattaaatttttataattttttttagtagaaaattgaagatatctaagataaaacatatgcattggtacttgtgtcagagt 30529277  T
Q  110 caactagatcatttatt--ggaacggagggagta 141  Q
    ||||||| |||||||||  || ||||||||||||    
T  30529278 caactaggtcatttattgagggacggagggagta 30529311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 141
Target Start/End: Complemental strand, 32565879 - 32565746
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||| ||||         ||||||||||||| |||||||||| |||||||||||||| |||||||| ||  |||    
T  32565879 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagagaaaacatatgcattggtacgtgtgtcagagt 32565780  T
Q  110 caactagatcatttattg--gaacggagggagta 141  Q
    ||||||  |||| |||||  | ||||||||||||    
T  32565779 caactaagtcatctattgaaggacggagggagta 32565746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 149
Target Start/End: Complemental strand, 50876453 - 50876356
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagtaattaatat 149  Q
    ||||||||||||| ||||||||||||||||||||||||| |||  ||| |   |||||||||| |||||||||  || ||||||||||||||| ||||    
T  50876453 gtagagaattgaagatatcaaagataaaacatatgcattggtatatgtgttagagtcaactaggtcatttatttagggacggagggagtaatttatat 50876356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 38458818 - 38458745
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttattg 127  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| ||  | |||||||| ||||||||||    
T  38458818 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagaatcaactaggtcatttattg 38458745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 10 - 115
Target Start/End: Original strand, 45234973 - 45235078
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||| ||||         ||| ||||||||| ||||||||||||||||||||||||| |||||||| ||  |||    
T  45234973 tcgatgaatatttttaaaatattaaatttttataattttttttagtaaagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 45235072  T
Q  110 caacta 115  Q
    ||||||    
T  45235073 caacta 45235078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 58 - 140
Target Start/End: Original strand, 49805428 - 49805512
Alignment:
Q  58 agaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagt 140  Q
    ||||||||| ||||||||||||||||||||||||| ||| || | ||  ||||||||||||||||||||  || |||||||||||    
T  49805428 agaattgaagatatcaaagataaaacatatgcattggtatgtttgtcagagtcaactagatcatttatttagggacggagggagt 49805512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 42708593 - 42708521
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt 126  Q
    ||||||||||||| |||||||| |||||||||||||||| ||| |||| ||  ||||||||| ||||||||||    
T  42708593 gtagagaattgaagatatcaaatataaaacatatgcattggtatgtgtgtcagagtcaactaaatcatttatt 42708521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 115
Target Start/End: Complemental strand, 50481366 - 50481306
Alignment:
Q  55 tagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaacta 115  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||| ||| | |||||||    
T  50481366 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcggaatcaacta 50481306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 54 - 101
Target Start/End: Original strand, 41501780 - 41501827
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgt 101  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  41501780 gtagagaattgaatatatcaaagataaaacatatgcattggtacgtgt 41501827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 14075867 - 14075757
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||||||||        | || | ||||||| |||||||| |||||||||||||||| ||| |||| ||| |||    
T  14075867 tcgatgaatatttttaaaatattaaattttcataatttttttag-taaataattgaagatatcaaatataaaacatatgcattggtatgtgtgtcggagt 14075769  T
Q  110 caactagatcat 121  Q
    ||||| ||||||    
T  14075768 caactcgatcat 14075757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 121
Target Start/End: Original strand, 21034703 - 21034769
Alignment:
Q  55 tagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcat 121  Q
    ||||||||| || |||||||||||||||||||| | ||||||| ||| || |||||||| |||||||    
T  21034703 tagagaattaaagatatcaaagataaaacatataccttagtacatgtgtcaaagtcaaccagatcat 21034769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 23330579 - 23330474
Alignment:
Q  16 aatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaacta 115  Q
    ||||||||||| |||||||||||||||||          |||||||||||| |||| ||||||||||||||||||||  ||| | | ||| | |||||||    
T  23330579 aatatttttaaaatattaaattttcataattttttttaatagagaattgaagatatgaaagataaaacatatgcattgatacatatgtcggaatcaacta 23330480  T
Q  116 gatcat 121  Q
    ||||||    
T  23330479 gatcat 23330474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 127
Target Start/End: Complemental strand, 37281225 - 37281108
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||| ||||         ||||||||||||| |||| |||||||||||| ||||||| ||| || | ||  |||    
T  37281225 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatataaaagataaaacacatgcatttgtatgtttgtcagagt 37281126  T
Q  110 caactagatcatttattg 127  Q
    ||||||| |||| |||||    
T  37281125 caactaggtcatctattg 37281108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 126
Target Start/End: Complemental strand, 1849784 - 1849716
Alignment:
Q  58 agaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt 126  Q
    ||||||||| ||||||||||||||||||||||||| |||  ||| |   |||||||||||||| |||||    
T  1849784 agaattgaagatatcaaagataaaacatatgcattggtatatgtgttagagtcaactagatcacttatt 1849716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 3e-32; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 141
Target Start/End: Complemental strand, 33121675 - 33121542
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||||||||        |||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||    
T  33121675 tcgatgaatatttttaaaatattaaattttcataattttttttggtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagt 33121576  T
Q  110 caactagatcatttatt--ggaacggagggagta 141  Q
    ||||||| |||||||||  || ||||||||||||    
T  33121575 caactaggtcatttattaagggacggagggagta 33121542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 25435500 - 25435412
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| || |||||||||||||||||||||  |||||||||||||||    
T  25435500 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtc-aagtcaactagatcatttattgaggaacggagggagta 25435412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 25163251 - 25163183
Alignment:
Q  56 agagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcattta 124  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||    
T  25163251 agagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaaatcaactagatcattta 25163183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 141
Target Start/End: Original strand, 643559 - 643692
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||| ||||         ||||||||||||| ||||||||||||||||||||||||| ||| |||| ||  |||    
T  643559 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagt 643658  T
Q  110 caactagatcatttatt--ggaacggagggagta 141  Q
    ||||||| |||||||||  || ||||||||||||    
T  643659 caactaggtcatttatttagggacggagggagta 643692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 55 - 145
Target Start/End: Complemental strand, 31854906 - 31854814
Alignment:
Q  55 tagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagtaatta 145  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||  |||||||| | |||||||||  || ||||||||||||||||    
T  31854906 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtatcagagtcaactgggtcatttatttagggacggagggagtaatta 31854814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 13207081 - 13207192
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||| ||||||||||||         ||||||||||||| ||||||||||||||||||||||||| |||||||| ||  |||    
T  13207081 tcgatgaatatttttaaaatataaaattttcataatttttttttgtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 13207180  T
Q  110 caactagatcat 121  Q
    ||||||| ||||    
T  13207181 caactaggtcat 13207192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 54 - 143
Target Start/End: Original strand, 7098045 - 7098132
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttattggaacggagggagtaat 143  Q
    ||||| ||||||| ||||||||||||||||||||||||| ||| |||| ||  ||||||||||||||||||  || ||||||||||||||    
T  7098045 gtagaaaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcattta--gggacggagggagtaat 7098132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 22020364 - 22020293
Alignment:
Q  55 tagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt 126  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||| ||  |||||||||| |||||||||    
T  22020364 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatt 22020293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 145
Target Start/End: Complemental strand, 11114654 - 11114561
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagtaatta 145  Q
    ||||||||| ||| ||||||||||||||||||||||||| ||| |||| ||  | |||||||| |||||||||  || ||||||||||||||||    
T  11114654 gtagagaatcgaagatatcaaagataaaacatatgcattggtatgtgtgtcagaatcaactaggtcatttattgagggacggagggagtaatta 11114561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 24150830 - 24150741
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||||| ||||||||||||||| ||||||||| ||| |||| ||  |||||||||| |||||||||  |||||||| ||||||    
T  24150830 gtagagaattgaagatatcaaagataaaatatatgcattggtatgtgtgtcagagtcaactaggtcatttatttaggaacggatggagta 24150741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 18991993 - 18991904
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||| ||||||| |||||||| |||||||||||||||| |||||||| ||  |||||||||| ||| |||||  || ||||||||||||    
T  18991993 gtagaaaattgaagatatcaaaaataaaacatatgcattggtacgtgtgtcagagtcaactaggtcacttattcagggacggagggagta 18991904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 29986330 - 29986392
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactag 116  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| ||  ||||||||||    
T  29986330 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactag 29986392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 8796139 - 8796067
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt 126  Q
    |||||||||| || |||||||||||||||||||| |||| ||| |||| ||  |||||||||||| |||||||    
T  8796139 gtagagaattaaagatatcaaagataaaacatatacattggtatgtgtgtcagagtcaactagatgatttatt 8796067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 29403733 - 29403661
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt 126  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||| |||| ||  |||||||||  |||||||||    
T  29403733 gtagagaattgaagatatcaaagataaaacatacgcattggtatgtgtgtcagagtcaactaagtcatttatt 29403661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 30237255 - 30237165
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaa-catatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||| ||| ||||||||||||||| |||||||||| |||||||| ||  |||||||||| |||| ||||  || ||||||||||||    
T  30237255 gtagagaatcgaagatatcaaagataaaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacggagggagta 30237165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 19068940 - 19069001
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaacta 115  Q
    |||||||| |||| ||||||||||||||| ||||| ||| |||||||||||| ||| |||||    
T  19068940 gtagagaactgaagatatcaaagataaaatatatgtattggtacgtgtatcggagttaacta 19069001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 20662231 - 20662303
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt 126  Q
    ||||||||||||| |||| |||||||||||||||||||| ||| || | ||  || ||||||| |||||||||    
T  20662231 gtagagaattgaagatattaaagataaaacatatgcattggtatgtatgtcagaggcaactaggtcatttatt 20662303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 1e-31; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 127
Target Start/End: Complemental strand, 49057989 - 49057872
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||||||||        |||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||    
T  49057989 tcgatgaatatttttaaaatattaaattttcataattttttttggtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagt 49057890  T
Q  110 caactagatcatttattg 127  Q
    ||||||| ||||||||||    
T  49057889 caactaggtcatttattg 49057872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 143
Target Start/End: Original strand, 4238748 - 4238883
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| ||||||| |||||||||          |||||||||||| |||| |||||||||||||||||||| |||||||| |||||||    
T  4238748 tcgatgaatatttttaaaatattaagttttcataattttttttaatagagaattgaagatattaaagataaaacatatgcattggtacgtgtgtcgaagt 4238847  T
Q  110 caactagatcattta--ttggaacggagggagtaat 143  Q
    |||||||||||||||   ||||||||||||||||||    
T  4238848 caactagatcatttaatatggaacggagggagtaat 4238883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 17052997 - 17052883
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||||||||          |||| ||||||| ||||||||||||||||||||||||| |||||||| |||||||    
T  17052997 tcgatgaatatttttaaaatattaaattttcataattttttttaatagaaaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagt 17052898  T
Q  110 caactagatcattta 124  Q
    |||||||||||||||    
T  17052897 caactagatcattta 17052883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 10435267 - 10435153
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| ||||||| |||||||||          |||||||||||| |||| |||||||||||||||||||| |||||||| |||||||    
T  10435267 tcgatgaatatttttaaaatattaagttttcataattttttttaatagagaattgaagatattaaagataaaacatatgcattggtacgtgtgtcgaagt 10435168  T
Q  110 caactagatcattta 124  Q
    |||||||||||||||    
T  10435167 caactagatcattta 10435153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 43137940 - 43137851
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||| ||  ||||||||||||||||||||  || ||||||||||||    
T  43137940 gtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttatttagggacggagggagta 43137851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 10 - 143
Target Start/End: Original strand, 32951264 - 32951399
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| ||||||| |||||||||          |||||||||||| ||| ||||||||||||||||||||| ||| |||| |||||||    
T  32951264 tcgatgaatatttttaaaatattaagttttcataattttttttaatagagaattgaagataccaaagataaaacatatgcattggtatgtgtgtcgaagt 32951363  T
Q  110 caactagatcattta--ttggaacggagggagtaat 143  Q
    |||||||||||||||   ||| ||||||||||||||    
T  32951364 caactagatcatttaatatgggacggagggagtaat 32951399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 55 - 141
Target Start/End: Complemental strand, 18659140 - 18659052
Alignment:
Q  55 tagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||| ||  ||||||||||||||||||||  || ||||||||||||    
T  18659140 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttatttagggacggagggagta 18659052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 55 - 143
Target Start/End: Complemental strand, 21907084 - 21906994
Alignment:
Q  55 tagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagtaat 143  Q
    |||| ||||||| ||||||||||||||||||||||||| ||| |||| ||  ||||||||||||||||||||  || ||||||||||||||    
T  21907084 tagataattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttattgagggacggagggagtaat 21906994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 148
Target Start/End: Original strand, 25097315 - 25097455
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||| ||||         ||||||||||||| ||||||||||||||||||||||||| |||||||| |   |||    
T  25097315 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgttagagt 25097414  T
Q  110 caactagatcatttatt--ggaacggagggagtaattaata 148  Q
    ||||||  |||| ||||  || ||||||||||||| |||||    
T  25097415 caactaagtcatctattgaggtacggagggagtaactaata 25097455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 46483640 - 46483567
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttattg 127  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||| ||  |||||||||| |||| |||||    
T  46483640 gtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattg 46483567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 7459992 - 7460064
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt 126  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| ||  |||||||||| |||||||||    
T  7459992 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatt 7460064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 143
Target Start/End: Original strand, 29728226 - 29728361
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||| ||||         ||||| ||||||| ||||| ||||||||||||||||||| |||| ||| ||  |||    
T  29728226 tcgatgaatatttttaaaatattaaatttttataattttttttagtagaaaattgaagatatctaagataaaacatatgcattggtacttgtgtcagagt 29728325  T
Q  110 caactagatcatttatt--ggaacggagggagtaat 143  Q
    ||||||| |||||||||  || ||||||||||||||    
T  29728326 caactaggtcatttattgagggacggagggagtaat 29728361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 56 - 141
Target Start/End: Complemental strand, 34827409 - 34827322
Alignment:
Q  56 agagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||| ||  |||||||||| ||| |||||  || ||||||||||||    
T  34827409 agagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcacttattcagggacggagggagta 34827322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 55 - 144
Target Start/End: Complemental strand, 45167387 - 45167296
Alignment:
Q  55 tagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagtaatt 144  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||| ||  |||||||||| |||||||||   ||||||| |||||||||    
T  45167387 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttaagaacggatggagtaatt 45167296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 3547549 - 3547659
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||||||||        | |||| ||||||| ||||||||||||||||||||||||| |||||||| ||| |||    
T  3547549 tcgatgaatatttttaaaatattaaattttcataatttttttag-tagataattgaagatatcaaagataaaacatatgcattggtacgtgtgtcggagt 3547647  T
Q  110 caactagatcat 121  Q
    ||| ||| ||||    
T  3547648 caattaggtcat 3547659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 9145635 - 9145524
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| ||||||||| |||||||         ||||| |||| || ||||||||||||||||||||||||| |||||||| ||| |||    
T  9145635 tcgatgaatatttttaaaatattaaatcttcataattttttttagtagaaaattcaagatatcaaagataaaacatatgcattggtacgtgtgtcggagt 9145536  T
Q  110 caactagatcat 121  Q
    ||||||| ||||    
T  9145535 caactaggtcat 9145524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 44545030 - 44545085
Alignment:
Q  142 attaatatcagtgttacctcaaattctcaaaaggtttatattcccggtgtgggaag 197  Q
    |||||| || |||||||||||||| |||||||||||||||||||||||||||||||    
T  44545030 attaatctccgtgttacctcaaatcctcaaaaggtttatattcccggtgtgggaag 44545085  T

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Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 1327400 - 1327311
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| || | |   ||||||||||||||||||||  || ||||||||||||    
T  1327400 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtatgtaagagtcaactagatcatttatttagggacggagggagta 1327311  T

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Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 38492141 - 38492052
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||||| |||| |||||||||||||||||||| |||||||| ||  |||||||||| ||| |||||  || ||||||||||||    
T  38492141 gtagagaattgaagatattaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcacttattcagggacggagggagta 38492052  T

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Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 104
Target Start/End: Complemental strand, 47638188 - 47638094
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatc 104  Q
    |||| |||||||||||| |||||||||||| ||||         ||||||||||||| |||| |||||||||||||||||||| |||||||||||    
T  47638188 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatattaaagataaaacatatgcattggtacgtgtatc 47638094  T

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Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 55 - 112
Target Start/End: Complemental strand, 36665107 - 36665050
Alignment:
Q  55 tagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaa 112  Q
    ||||||| |||| ||||||||||||||||||||||||| |||||||||||| ||||||    
T  36665107 tagagaaatgaagatatcaaagataaaacatatgcattggtacgtgtatcggagtcaa 36665050  T

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Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 45093807 - 45093742
Alignment:
Q  56 agagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcat 121  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||| ||  ||||||||| |||||    
T  45093807 agagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaaatcat 45093742  T

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Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 8559177 - 8559249
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt 126  Q
    ||||||||||||| |||| |||||||||||||||||||| ||| |||| ||  |||||||||| |||||||||    
T  8559177 gtagagaattgaagatattaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatt 8559249  T

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Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 143
Target Start/End: Complemental strand, 27849041 - 27848950
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagtaat 143  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| || | || ||||||||||| |||| || |  || ||||||||||||||    
T  27849041 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtatgtcaaagtcaactaggtcatctaatgagggacggagggagtaat 27848950  T

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Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 38833753 - 38833681
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt 126  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| ||  |||||||||| ||| |||||    
T  38833753 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcacttatt 38833681  T

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Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 51062479 - 51062407
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt 126  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| ||  |||||||||| ||| |||||    
T  51062479 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcacttatt 51062407  T

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Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 51392464 - 51392536
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt 126  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| |   |||||||||| |||||||||    
T  51392464 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtaagagtcaactaggtcatttatt 51392536  T

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Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 126
Target Start/End: Original strand, 54840304 - 54840372
Alignment:
Q  58 agaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt 126  Q
    ||||||||| ||||||||||||||||||||||||| ||| |||| ||  |||||||||| |||||||||    
T  54840304 agaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatt 54840372  T

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Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 10571316 - 10571387
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttat 125  Q
    ||||||||||||| ||||||||||||||||||||| ||| ||| |||| ||  |||||||||| ||||||||    
T  10571316 gtagagaattgaagatatcaaagataaaacatatgtattggtatgtgtgtcagagtcaactaggtcatttat 10571387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 28690605 - 28690538
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcat 121  Q
    |||||| |||||| ||||||||||||||||||||||||| ||| |||| ||| |||||||||| ||||    
T  28690605 gtagagcattgaagatatcaaagataaaacatatgcattggtatgtgtgtcggagtcaactaggtcat 28690538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 35717983 - 35718094
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| ||||| |||||| |||||||||||||||||         ||||| ||||||| ||||||| ||||||||||||||||| |||||||| ||  |||    
T  35717983 tcgatgaatacttttaaaatattaaattttcataatattttttagtagaaaattgaagatatcaaggataaaacatatgcattggtacgtgtgtcagagt 35718082  T
Q  110 caactagatcat 121  Q
    |||||| |||||    
T  35718083 caactaaatcat 35718094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 54 - 142
Target Start/End: Complemental strand, 37832989 - 37832899
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagtaa 142  Q
    ||||||||||||| |||||||| |||||||||||||||| ||| |||| ||  |||||||||  |||||||||  || |||||||||||||    
T  37832989 gtagagaattgaagatatcaaaaataaaacatatgcattggtatgtgtgtcagagtcaactatgtcatttatttagggacggagggagtaa 37832899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 7671441 - 7671523
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcatt 92  Q
    |||| |||||||||||| |||||| ||||||||||         ||||||||||||| |||||||||||||||||||||||||    
T  7671441 tcgatgaatatttttaaaatattatattttcataattttttttagtagagaattgaagatatcaaagataaaacatatgcatt 7671523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 141
Target Start/End: Complemental strand, 15503151 - 15503025
Alignment:
Q  15 gaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaact 114  Q
    |||||||||||| |||||||||||||||||          |||||||||||| |||||||||||||||||||||||||  ||||| | ||| |||||| |    
T  15503151 gaatatttttaaaatattaaattttcataatttttttt--tagagaattgaatatatcaaagataaaacatatgcattgatacgtatgtcggagtcaatt 15503054  T
Q  115 agatcatttatt--ggaacggagggagta 141  Q
    || |||| ||||  || ||||||||||||    
T  15503053 aggtcatctattgagggacggagggagta 15503025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 32285348 - 32285410
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactag 116  Q
    ||||||||||||| ||||||||||||||||||||| ||| |||||||| ||  ||||||||||    
T  32285348 gtagagaattgaagatatcaaagataaaacatatgtattggtacgtgtgtcagagtcaactag 32285410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 142
Target Start/End: Original strand, 48707015 - 48707105
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagtaa 142  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| || | ||  | ||||||| |||| |||||  || |||||||||||||    
T  48707015 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtatgtcagaatcaactaaatcacttatttagggacggagggagtaa 48707105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 141
Target Start/End: Original strand, 52668660 - 52668746
Alignment:
Q  57 gagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    |||||||||||||||||||||||||| |||||||||  || |||| ||  || ||||||| |||||||||  || ||||||||||||    
T  52668660 gagaattgaaaatatcaaagataaaatatatgcattgatatgtgtgtcagagccaactaggtcatttatttagggacggagggagta 52668746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 115
Target Start/End: Complemental strand, 10437415 - 10437310
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||| ||||         ||| ||||||||| ||||||||||||||||||||  ||| |||||||| ||  |||    
T  10437415 tcgatgaatatttttaaaatattaaatttttataagtttttttagtaaagaattgaagatatcaaagataaaacatataaattggtacgtgtgtcagagt 10437316  T
Q  110 caacta 115  Q
    ||||||    
T  10437315 caacta 10437310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 53066462 - 53066401
Alignment:
Q  55 tagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactag 116  Q
    |||| ||||||| ||||||||||||||||||||||||| ||| |||| ||  ||||||||||    
T  53066462 tagataattgaagatatcaaagataaaacatatgcattggtaagtgtgtcagagtcaactag 53066401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 52550797 - 52550849
Alignment:
Q  63 tgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaacta 115  Q
    |||| ||||| |||||||||||||||||||||||||| | ||| |||||||||    
T  52550797 tgaagatatcgaagataaaacatatgcattagtacgtatgtcggagtcaacta 52550849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 124
Target Start/End: Complemental strand, 48143842 - 48143784
Alignment:
Q  66 aaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcattta 124  Q
    |||||||||||||||| |||||| ||| ||| | || ||| ||||||||||||||||||    
T  48143842 aaatatcaaagataaaccatatgtattggtatgagtgtcggagtcaactagatcattta 48143784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 141
Target Start/End: Original strand, 32776028 - 32776161
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||||||||         ||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||    
T  32776028 tcgatgaatatttttaaaatattaaattttcataatttatttttgtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtatcggagt 32776127  T
Q  110 caactagatcatttatt--ggaacggagggagta 141  Q
    ||||||| |||| ||||  || ||||||||||||    
T  32776128 caactaggtcatctattaagggacggagggagta 32776161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 55 - 143
Target Start/End: Complemental strand, 40598216 - 40598126
Alignment:
Q  55 tagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcattta--ttggaacggagggagtaat 143  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||   ||| ||||||||||||||    
T  40598216 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatatgggacggagggagtaat 40598126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 127
Target Start/End: Original strand, 41463651 - 41463762
Alignment:
Q  16 aatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaacta 115  Q
    ||||||||||| |||||||||||||||||         ||||||||||||| ||||||||||||||||||||||||| |||||||| ||| |||||||||    
T  41463651 aatatttttaaaatattaaattttcataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaacta 41463750  T
Q  116 gatcatttattg 127  Q
    | ||||||||||    
T  41463751 ggtcatttattg 41463762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 141
Target Start/End: Complemental strand, 38963652 - 38963519
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||||||||         ||||||||||||| | ||||||||||||||||||||||| |||||||| |||||||    
T  38963652 tcgatgaatatttttaaaatattaaattttcataatttttttttgtagagaattgaagaaatcaaagataaaacatatgcattggtacgtgtgtcgaagt 38963553  T
Q  110 caactagatcatttatt--ggaacggagggagta 141  Q
     |||||| |||| ||||  |||||||||||||||    
T  38963552 taactaggtcatctattaaggaacggagggagta 38963519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 10 - 126
Target Start/End: Complemental strand, 30708861 - 30708745
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||| ||||         ||||||||||||| ||||||||||||||||||||||||| |||||||| || ||||    
T  30708861 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcaaagt 30708762  T
Q  110 caactagatcatttatt 126  Q
    ||||||| ||| |||||    
T  30708761 caactaggtcacttatt 30708745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 40898729 - 40898662
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcat 121  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||| ||| |||||||||||||||    
T  40898729 gtagagaattgaagatatcaaagataaaacatatacattagtacgtgtgtcggagtcaactagatcat 40898662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 141
Target Start/End: Original strand, 7443019 - 7443152
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||| ||||         ||||||||||||| ||||||||||||||||||||||||| |||||||| ||  |||    
T  7443019 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 7443118  T
Q  110 caactagatcatttatt--ggaacggagggagta 141  Q
    ||||||| ||| |||||  || ||||||||||||    
T  7443119 caactaggtcacttattcagggacggagggagta 7443152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 121
Target Start/End: Original strand, 38137664 - 38137769
Alignment:
Q  15 gaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaact 114  Q
    |||||||||||| |||||||||||||||||         |||| |||||||| ||||||||||||||||||||||||| |||||||| ||| ||||||||    
T  38137664 gaatatttttaa-atattaaattttcataaaaaattttagtagggaattgaagatatcaaagataaaacatatgcatttgtacgtgtgtcggagtcaact 38137762  T
Q  115 agatcat 121  Q
    |||||||    
T  38137763 agatcat 38137769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 55 - 141
Target Start/End: Complemental strand, 34827000 - 34826912
Alignment:
Q  55 tagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||| ||  |||||||||| |||||||||  || ||||||||||||    
T  34827000 tagagaattgaagatatcaaagataaaacatatgcattagtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 34826912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 16941983 - 16942055
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt 126  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| ||  ||||||||||||||||||||    
T  16941983 gtagagaattgaatatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttatt 16942055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 17012648 - 17012720
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt 126  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| ||  ||||||||||||||||||||    
T  17012648 gtagagaattgaatatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttatt 17012720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 36199123 - 36199195
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt 126  Q
    ||||||||| ||| ||||||||||||||||||||||||||||| |||| ||  ||||||||||||||||||||    
T  36199123 gtagagaatcgaagatatcaaagataaaacatatgcattagtatgtgtgtcagagtcaactagatcatttatt 36199195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 39418148 - 39418259
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||||||||         ||||| ||||||| ||||||||||||||| ||||| ||| ||| |||| |||||||    
T  39418148 tcgatgaatatttttaaaatattaaattttcataattttttttagtagataattgaagatatcaaagataaaatatatgtattggtaagtgtgtcgaagt 39418247  T
Q  110 caactagatcat 121  Q
    ||||||||||||    
T  39418248 caactagatcat 39418259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 54 - 141
Target Start/End: Original strand, 3987404 - 3987493
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||||| ||||||||||||||||||||| ||| ||| |||| ||  ||||||||||||||||||||  || ||||||||||||    
T  3987404 gtagagaattgaagatatcaaagataaaacatatgtattggtatgtgtgtcagagtcaactagatcatttatttagggacggagggagta 3987493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 14372166 - 14372077
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| ||  |||||||||| |||||||||  || ||||||||||||    
T  14372166 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 14372077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 23671465 - 23671376
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| ||  |||||||||| |||||||||  || ||||||||||||    
T  23671465 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 23671376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 147
Target Start/End: Original strand, 4045361 - 4045500
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||| ||||          |||||||||||| ||||||||||||||||||||||||| ||| |||| ||  |||    
T  4045361 tcgatgaatatttttaaaatattaaatttttataattttttttaatagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagt 4045460  T
Q  110 caactagatcatttatt--ggaacggagggagtaattaat 147  Q
    |||| | ||||||||||  || |||||||||||| |||||    
T  4045461 caaccaaatcatttatttagggacggagggagtatttaat 4045500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 55 - 106
Target Start/End: Original strand, 43925254 - 43925305
Alignment:
Q  55 tagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcga 106  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  43925254 tagagaattgaagatatcaaagataaaacatatgcattagttcgtgtatcga 43925305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 44330472 - 44330401
Alignment:
Q  55 tagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt 126  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||| ||  |||||||||| |||||||||    
T  44330472 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatt 44330401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 18718328 - 18718239
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||||| |||||||||||||||||||||||||  || |||| ||  |||||||||| |||||||||  || ||||||||||||    
T  18718328 gtagagaattgaagatatcaaagataaaacatatgcattgatatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 18718239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 126
Target Start/End: Original strand, 38588075 - 38588133
Alignment:
Q  68 atatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt 126  Q
    ||||||||||||||||||||||||| ||| |||||||  ||||||||||||||||||||    
T  38588075 atatcaaagataaaacatatgcattggtatgtgtatcagagtcaactagatcatttatt 38588133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 141
Target Start/End: Original strand, 40425421 - 40425510
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| ||  | |||||||| |||||||||  || ||||||||||||    
T  40425421 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagaatcaactaggtcatttatttagggacggagggagta 40425510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 42038612 - 42038523
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| ||  |||||||||| ||| |||||  || ||||||||||||    
T  42038612 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcacttatttagggacggagggagta 42038523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 42951468 - 42951362
Alignment:
Q  15 gaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaact 114  Q
    |||||||||||| |||||||||||||||||         ||| ||||| |||||||||||| ||||||||||| ||||  ||||||| ||| ||||||||    
T  42951468 gaatatttttaaaatattaaattttcataatttttattagtaaagaatagaaaatatcaaaaataaaacatatacattgatacgtgtgtcggagtcaact 42951369  T
Q  115 agatcat 121  Q
    |||||||    
T  42951368 agatcat 42951362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 24283130 - 24283203
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttattg 127  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||| ||| |  ||||||| |||| |||||    
T  24283130 gtagagaattgaagatatcaaagataaaacatatgcatcagtacgtgtgtcggaaacaactaggtcatctattg 24283203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 55 - 141
Target Start/End: Complemental strand, 27559663 - 27559575
Alignment:
Q  55 tagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    |||||||||||| |||||||||||||||||||| ||||  || |||| ||  ||||||||||||||||||||  || ||||||||||||    
T  27559663 tagagaattgaagatatcaaagataaaacatatacattgatatgtgtgtcagagtcaactagatcatttatttagggacggagggagta 27559575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 126
Target Start/End: Original strand, 14707710 - 14707778
Alignment:
Q  58 agaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt 126  Q
    ||||||||| ||||||||||||||||||||||||| ||| |||| ||  |||||||||| |||||||||    
T  14707710 agaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatt 14707778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 141
Target Start/End: Complemental strand, 4045983 - 4045850
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||| ||||         ||||| |||| || |||||||||||||||||||||||||||||||| | ||  | |    
T  4045983 tcgatgaatatttttaaaatattaaatttttataattttttttagtagaaaattaaagatatcaaagataaaacatatgcattagtacgtatgtcagaat 4045884  T
Q  110 caactagatcatttatt--ggaacggagggagta 141  Q
    |||||| ||||| ||||  |||| ||||||||||    
T  4045883 caactaaatcatctattgaggaatggagggagta 4045850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 30776321 - 30776403
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcatt 92  Q
    |||| |||||||||||| |||||||||||| ||||         ||||||||||||| |||||||||||||||||||||||||    
T  30776321 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcatt 30776403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 141
Target Start/End: Original strand, 41172929 - 41173018
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||| ||||||| ||||||||||||||||||||||||| ||| |||| ||  |||||| ||| |||||||||  || ||||||||||||    
T  41172929 gtagaaaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaagtaggtcatttatttagggacggagggagta 41173018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 44283413 - 44283523
Alignment:
Q  16 aatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaacta 115  Q
    ||||||||||| |||||||||||| ||||         ||||||||||||| ||||||||||||||| ||||||||| ||| |||| ||  | |||||||    
T  44283413 aatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaatatatgcattggtatgtgtgtcagaatcaacta 44283512  T
Q  116 gatcatttatt 126  Q
    | |||||||||    
T  44283513 ggtcatttatt 44283523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 332410 - 332318
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnng-gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgt 101  Q
    |||| |||||||||||| |||||||||||||||||          ||||||||||||| |||||||||||||||||||||| || ||||||||    
T  332410 tcgatgaatatttttaaaatattaaattttcataatttttttttagtagagaattgaagatatcaaagataaaacatatgcgttggtacgtgt 332318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 20517508 - 20517436
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt 126  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| ||  |||||| ||  |||||||||    
T  20517508 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaattatgtcatttatt 20517436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 141
Target Start/End: Original strand, 9877255 - 9877344
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    |||||||||| || |||||||||||||||||||||||||   |||||| ||  |||||||||| |||| ||||  || ||||||||||||    
T  9877255 gtagagaattaaagatatcaaagataaaacatatgcattcacacgtgtgtcagagtcaactaggtcatctattgagggacggagggagta 9877344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 7106406 - 7106327
Alignment:
Q  15 gaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattag 94  Q
    |||||||||||  |||||||||||||||||         ||||| ||||||| ||| |||||||||||||||||||||||    
T  7106406 gaatatttttagaatattaaattttcataatattttttagtagataattgaagatagcaaagataaaacatatgcattag 7106327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 13399277 - 13399338
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaacta 115  Q
    ||||||||||||| |||| ||| ||||||| |||||||| |||| ||||||  |||||||||    
T  13399277 gtagagaattgaagatataaaaaataaaacgtatgcattggtacatgtatcagagtcaacta 13399338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 1e-25; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 55 - 143
Target Start/End: Original strand, 37231737 - 37231827
Alignment:
Q  55 tagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcattta--ttggaacggagggagtaat 143  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||   ||| ||||||||||||||    
T  37231737 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatatgggacggagggagtaat 37231827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 10 - 143
Target Start/End: Original strand, 35500875 - 35501010
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| ||||||| |||||||||          |||||||||||| ||||||||||||||||||||||||| |||||||| |||||||    
T  35500875 tcgatgaatatttttaaaatattaagttttcataattttttttaatagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagt 35500974  T
Q  110 caactagatcattta--ttggaacggagggagtaat 143  Q
     ||||||||||||||   ||| ||||||||||||||    
T  35500975 taactagatcatttaatatgggacggagggagtaat 35501010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 10 - 116
Target Start/End: Original strand, 34478139 - 34478245
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| ||||||| |||||||||         ||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||    
T  34478139 tcgatgaatatttttaaaatattaagttttcataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagt 34478238  T
Q  110 caactag 116  Q
    |||||||    
T  34478239 caactag 34478245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 36643250 - 36643181
Alignment:
Q  55 tagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcattta 124  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||| |||||||||||    
T  36643250 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaattagatcattta 36643181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 10 - 143
Target Start/End: Original strand, 10464243 - 10464378
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| ||||||| |||||||||          |||||||||||| ||||||||||||||||||||||||| |||||||| || ||||    
T  10464243 tcgatgaatatttttaaaatattaagttttcataattttttttaatagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcaaagt 10464342  T
Q  110 caactagatcattta--ttggaacggagggagtaat 143  Q
    |||||| ||||||||   ||| ||||||||||||||    
T  10464343 caactatatcatttaatatgggacggagggagtaat 10464378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 10 - 127
Target Start/End: Complemental strand, 21392151 - 21392034
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||| ||||         |||||||||| || ||||||||||||||||||||||||| |||||||| ||  |||    
T  21392151 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattaaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 21392052  T
Q  110 caactagatcatttattg 127  Q
    |||||||||||| |||||    
T  21392051 caactagatcatctattg 21392034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 10 - 127
Target Start/End: Complemental strand, 47538056 - 47537939
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||| ||||         ||||||||||||| ||||||||||||||||||||||||| |||||| ||||  | |    
T  47538056 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtacgtatatcagaat 47537957  T
Q  110 caactagatcatttattg 127  Q
    ||| ||||||||||||||    
T  47537956 caattagatcatttattg 47537939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 141
Target Start/End: Original strand, 31466486 - 31466619
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||| ||||         ||| ||||||||| ||||||||||||||||||||||||| |||||||| ||  |||    
T  31466486 tcgatgaatatttttaaaatattaaatttttataattttttttagtatagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 31466585  T
Q  110 caactagatcatttatt--ggaacggagggagta 141  Q
    ||||||| ||| |||||  || ||||||||||||    
T  31466586 caactaggtcacttatttagggacggagggagta 31466619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 36819785 - 36819696
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| ||  |||||||||| |||||||||  || ||||||||||||    
T  36819785 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 36819696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 143
Target Start/End: Complemental strand, 19072858 - 19072767
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagtaat 143  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| ||  | |||||||| |||||||||  || ||||||||||||||    
T  19072858 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagaatcaactaggtcatttatttagggacggagggagtaat 19072767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 143
Target Start/End: Complemental strand, 36905615 - 36905524
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagtaat 143  Q
    ||||||||||||| ||||||||||||||||||||| ||| ||| |||| ||  ||||||||| ||||||||||  || ||||||||||||||    
T  36905615 gtagagaattgaagatatcaaagataaaacatatgtattggtatgtgtgtcagagtcaactaaatcatttatttagggacggagggagtaat 36905524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 42086810 - 42086882
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt 126  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| ||  |||||||||| |||||||||    
T  42086810 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatt 42086882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 126
Target Start/End: Original strand, 42834420 - 42834536
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||| ||||         ||| ||||||||| |||||||||||||||||||| |||| ||| ||||||| ||||    
T  42834420 tcgatgaatatttttaaaatattaaatttttataattttttttagtaaagaattgaagatatcaaagataaaacatatacattggtatgtgtatcaaagt 42834519  T
Q  110 caactagatcatttatt 126  Q
    ||| ||| |||||||||    
T  42834520 caaataggtcatttatt 42834536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 18795268 - 18795359
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgt 101  Q
    |||| |||||||||||| |||||||||||||||||         |||||||||| || |||||||||||||||||||| |||||||||||||    
T  18795268 tcgatgaatatttttaaaatattaaattttcataattttttttagtagagaatttaagatatcaaagataaaacatatacattagtacgtgt 18795359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 126
Target Start/End: Original strand, 23474102 - 23474213
Alignment:
Q  15 gaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaact 114  Q
    |||||||||||| |||||||||||| ||||         ||||||||||||| |||||||||||||||||||||||||  ||||||| ||  ||||||||    
T  23474102 gaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattgatacgtgtgtcagagtcaact 23474201  T
Q  115 agatcatttatt 126  Q
    || ||| |||||    
T  23474202 aggtcacttatt 23474213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 31110755 - 31110673
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcatt 92  Q
    |||| |||||||||||| |||||||||||| ||||         |||||||||||||||||||||||||||||||||||||||    
T  31110755 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaaaatatcaaagataaaacatatgcatt 31110673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 116
Target Start/End: Original strand, 31497832 - 31497937
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||||||||        | |||| ||||||| ||||||||||||||||||||| ||||||| |||| ||| |||    
T  31497832 tcgatgaatatttttaaaatattaaattttcataacttttttag-tagataattgaagatatcaaagataaaacatatgtattagtatgtgtgtcggagt 31497930  T
Q  110 caactag 116  Q
    |||||||    
T  31497931 caactag 31497937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 141
Target Start/End: Original strand, 36859380 - 36859469
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| |   |||||| ||| |||||||||  |||||||||||||||    
T  36859380 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgttagagtcaattaggtcatttatttaggaacggagggagta 36859469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 137
Target Start/End: Complemental strand, 48531455 - 48531326
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||| ||||         ||||||||||||| ||||||||||||||| |||||||||  ||||||| ||  |||    
T  48531455 tcgatgaatatttttaaaatattaaatttttataatattttttagtagagaattgaagatatcaaagataaaatatatgcattgatacgtgtgtcagagt 48531356  T
Q  110 caactagatcatttatt--ggaacggaggg 137  Q
    |||||| ||||| ||||  |||||||||||    
T  48531355 caactaaatcatctattgaggaacggaggg 48531326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 37951117 - 37951189
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt 126  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||  ||  |||||||||| |||||||||    
T  37951117 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtgcgtcagagtcaactaggtcatttatt 37951189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 44479892 - 44479964
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt 126  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| ||  |||||||||| ||| |||||    
T  44479892 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcacttatt 44479964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 54 - 142
Target Start/End: Complemental strand, 47081069 - 47080979
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagtaa 142  Q
    |||||||||| || ||||||||||||||||||||||||| ||| |||| ||  |||||||||| ||||| |||  || |||||||||||||    
T  47081069 gtagagaatttaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcattcatttagggacggagggagtaa 47080979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 2400374 - 2400285
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||| ||| ||||||||||||||||||||||||| |||  ||| ||  |||||||||| |||||||||  || ||||||||||||    
T  2400374 gtagagaatggaagatatcaaagataaaacatatgcattggtatatgtgtcagagtcaactaggtcatttatttagggacggagggagta 2400285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 141
Target Start/End: Original strand, 28185580 - 28185669
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    |||||||||| || ||||||||||||||||||||| ||| ||| |||| ||  |||||||||| |||||||||  || ||||||||||||    
T  28185580 gtagagaattaaagatatcaaagataaaacatatgtattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 28185669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 141
Target Start/End: Original strand, 47713674 - 47713763
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||| ||||||| ||||||||||||||||||||||||| ||| |||| ||  |||||||||| ||| |||||  || ||||||||||||    
T  47713674 gtagaaaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcacttatttagggacggagggagta 47713763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 119
Target Start/End: Original strand, 29770602 - 29770711
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||||||||          ||||| |||||| |||||||| |||||| ||||||||  |||||| | |||||||    
T  29770602 tcgatgaatatttttaaaatattaaattttcataattttttttaatagagcattgaagatatcaaaaataaaaaatatgcatcggtacgtatgtcgaagt 29770701  T
Q  110 caactagatc 119  Q
    ||||||||||    
T  29770702 caactagatc 29770711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 141
Target Start/End: Original strand, 32619114 - 32619203
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||||| |||||||| ||||||||||||||||  || |||| ||  |||||||||  |||||||||  || ||||||||||||    
T  32619114 gtagagaattgaagatatcaaaaataaaacatatgcattgatatgtgtgtcagagtcaactaagtcatttatttagggacggagggagta 32619203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 93
Target Start/End: Original strand, 39982287 - 39982325
Alignment:
Q  55 tagagaattgaaaatatcaaagataaaacatatgcatta 93  Q
    |||||||||||| |||| |||||||||||||||||||||    
T  39982287 tagagaattgaagatattaaagataaaacatatgcatta 39982325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 4e-25; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 6923068 - 6923182
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| ||||||||||||||| |          |||||||||||| ||||||||||||||||||||||||| |||||||| |||||||    
T  6923068 tcgatgaatatttttaaaatattaaattttcattatttttttttatagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagt 6923167  T
Q  110 caactagatcattta 124  Q
    |||||||||||||||    
T  6923168 caactagatcattta 6923182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 25644492 - 25644378
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| ||| |||||||||||||          |||||||||||| ||||||||||||||||||||||||| |||||||| |||||||    
T  25644492 tcgatgaatatttttaaaatagtaaattttcataattttttttaatagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagt 25644393  T
Q  110 caactagatcattta 124  Q
    |||||||||||||||    
T  25644392 caactagatcattta 25644378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 19525842 - 19525956
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| ||||||| |||||||||         ||| ||||||||| ||||||||||||||||||||||||| |||||||| |||||||    
T  19525842 tcgatgaatatttttaaaatattaagttttcataattttttttagtaaagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagt 19525941  T
Q  110 caactagatcattta 124  Q
    ||||||| |||||||    
T  19525942 caactaggtcattta 19525956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 10 - 127
Target Start/End: Original strand, 19170667 - 19170784
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||||||||        |||||||||||||| |||| |||||||||| ||||||||| |||| ||| |||||||    
T  19170667 tcgatgaatatttttaaaatattaaattttcataattttttttggtagagaattgaagatattaaagataaaatatatgcattggtacatgtgtcgaagt 19170766  T
Q  110 caactagatcatttattg 127  Q
    ||||||| |||| |||||    
T  19170767 caactaggtcatctattg 19170784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 10 - 126
Target Start/End: Original strand, 7738947 - 7739063
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||| ||||         ||||||||||||| |||||||||||||||||||||||||  ||||||| ||| |||    
T  7738947 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaatatatcaaagataaaacatatgcattgatacgtgtgtcggagt 7739046  T
Q  110 caactagatcatttatt 126  Q
    ||||||| |||||||||    
T  7739047 caactaggtcatttatt 7739063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 15 - 115
Target Start/End: Complemental strand, 50033148 - 50033048
Alignment:
Q  15 gaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaact 114  Q
    |||||||||||| |||||||||||||||||         ||||||||||||| ||||||||||||||||||||||||| |||||||| ||| ||||||||    
T  50033148 gaatatttttaaaatattaaattttcataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaact 50033049  T
Q  115 a 115  Q
    |    
T  50033048 a 50033048  T

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Target: chr4; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 28166363 - 28166274
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| ||  ||||||||||||||||||||  || ||||||||||||    
T  28166363 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttatttagggacggagggagta 28166274  T

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Target: chr4; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 54 - 141
Target Start/End: Original strand, 45198512 - 45198601
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| ||  ||||||||||||||||||||  || ||||||||||||    
T  45198512 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttatttagggacggagggagta 45198601  T

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Target: chr4; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 50035667 - 50035561
Alignment:
Q  15 gaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaact 114  Q
    |||||||||||| |||||||||||||||||         ||||||||||||| || ||||||||||||||||||||||  ||||||| ||| ||||||||    
T  50035667 gaatatttttaaaatattaaattttcataattttttttagtagagaattgaagatttcaaagataaaacatatgcattgatacgtgtgtcggagtcaact 50035568  T
Q  115 agatcat 121  Q
    |||||||    
T  50035567 agatcat 50035561  T

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Target: chr4; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 55 - 141
Target Start/End: Complemental strand, 5735359 - 5735271
Alignment:
Q  55 tagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||| ||  ||||||||||||||||||||  || ||||||||||||    
T  5735359 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttatttagggacggagggagta 5735271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 143
Target Start/End: Complemental strand, 4209452 - 4209361
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagtaat 143  Q
    ||||||||||||| ||||||||||||||||||||| ||| |||||||| ||  ||||||||||||||| ||||  || ||||||||||||||    
T  4209452 gtagagaattgaagatatcaaagataaaacatatgtattggtacgtgtgtcagagtcaactagatcatctattgagggacggagggagtaat 4209361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 19634021 - 19634092
Alignment:
Q  55 tagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt 126  Q
    |||||||||||| ||||||||||||||||||||| ||| |||||||| ||| ||||||||||||||| ||||    
T  19634021 tagagaattgaagatatcaaagataaaacatatgaattggtacgtgtgtcggagtcaactagatcatctatt 19634092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 19731294 - 19731404
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||||||||        | ||||| |||||| ||||||||||||||||||||||||| |||||||| ||| |||    
T  19731294 tcgatgaatatttttaaaatattaaattttcataattgttttag-tagagcattgaagatatcaaagataaaacatatgcattggtacgtgtgtcggagt 19731392  T
Q  110 caactagatcat 121  Q
    ||||||| ||||    
T  19731393 caactaggtcat 19731404  T

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Target: chr4; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 54 - 141
Target Start/End: Original strand, 3901311 - 3901400
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| ||  |||||||||| |||||||||  || ||||||||||||    
T  3901311 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 3901400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 54 - 141
Target Start/End: Original strand, 26205876 - 26205965
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| |   ||||||||||||||||||||  || ||||||||||||    
T  26205876 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtaagagtcaactagatcatttatttagggacggagggagta 26205965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 54 - 141
Target Start/End: Original strand, 46212522 - 46212611
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| ||  |||||||||| |||||||||  || ||||||||||||    
T  46212522 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 46212611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 46803720 - 46803631
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| ||  |||||||||| |||||||||  || ||||||||||||    
T  46803720 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 46803631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 116
Target Start/End: Complemental strand, 55014395 - 55014289
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||||||||          || | ||||||| |||||||||||||||||||||||||||||||||| ||| |||    
T  55014395 tcgatgaatatttttaaaatattaaattttcataatttttcttaatacacaattgaatatatcaaagataaaacatatgcattagtacgtgtgtcggagt 55014296  T
Q  110 caactag 116  Q
    |||||||    
T  55014295 caactag 55014289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 19652427 - 19652500
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttattg 127  Q
    ||||||||||||| ||||||||||||||||||||| ||| |||||| | ||| ||||||||||||||| |||||    
T  19652427 gtagagaattgaagatatcaaagataaaacatatgaattggtacgtatgtcggagtcaactagatcatatattg 19652500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 144
Target Start/End: Original strand, 39786528 - 39786620
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagtaatt 144  Q
    ||||||||||||| |||||||||||||||||||||||||  ||||||| ||  |||||||||| |||| ||||  || |||||||||||||||    
T  39786528 gtagagaattgaagatatcaaagataaaacatatgcattgatacgtgtgtcagagtcaactaggtcatctattgagggacggagggagtaatt 39786620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 126
Target Start/End: Original strand, 3443515 - 3443631
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||| ||||         ||||||||||||| ||||||||||||||||||||||||| |||||||| ||  |||    
T  3443515 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcatttgtacgtgtgtcagagt 3443614  T
Q  110 caactagatcatttatt 126  Q
    ||| || |||| |||||    
T  3443615 caattaaatcacttatt 3443631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 37688205 - 37688277
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt 126  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| ||  ||||| ||||||||||||||    
T  37688205 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcatctagatcatttatt 37688277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 55 - 143
Target Start/End: Complemental strand, 4264222 - 4264132
Alignment:
Q  55 tagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagtaat 143  Q
    |||| ||||||| ||||||||||||||||||||||||| ||| |||| ||  |||||||||| |||||||||  || ||||||||||||||    
T  4264222 tagataattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttattgagggacggagggagtaat 4264132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 141
Target Start/End: Original strand, 3442516 - 3442605
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| ||  |||||||||  |||||||||  || ||||||||||||    
T  3442516 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactatgtcatttatttagggacggagggagta 3442605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 141
Target Start/End: Original strand, 18360145 - 18360234
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||  ||  |||||||||| |||| ||||  || ||||||||||||    
T  18360145 gtagagaattgaagatatcaaagataaaacatatgcattggtacgtgcgtcagagtcaactaggtcatctattgagggacggagggagta 18360234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 141
Target Start/End: Original strand, 21859091 - 21859180
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||||||||||||||||||||||||||| ||| ||| |||| ||  |||||||||| | |||||||  || ||||||||||||    
T  21859091 gtagagaattgaaaatatcaaagataaaacatatgtattggtatgtgtgtcagagtcaactaggttatttatttagggacggagggagta 21859180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 141
Target Start/End: Original strand, 21914954 - 21915043
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||||||||||||||||||||||||||| ||| ||| |||| ||  |||||||||| | |||||||  || ||||||||||||    
T  21914954 gtagagaattgaaaatatcaaagataaaacatatgtattggtatgtgtgtcagagtcaactaggttatttatttagggacggagggagta 21915043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 36602783 - 36602694
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||  ||  |||||||||| |||| ||||  || ||||||||||||    
T  36602783 gtagagaattgaagatatcaaagataaaacatatgcattggtacgtgcgtcagagtcaactaggtcatctattgagggacggagggagta 36602694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 47579376 - 47579287
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| |   |||||||||| |||||||||  || ||||||||||||    
T  47579376 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtaagagtcaactaggtcatttatttagggacggagggagta 47579287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 1377121 - 1377048
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttattg 127  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| ||  |||||||||  ||||||||||    
T  1377121 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcatagtcaactacgtcatttattg 1377048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 55 - 112
Target Start/End: Complemental strand, 19631396 - 19631339
Alignment:
Q  55 tagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaa 112  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||| ||| ||||||    
T  19631396 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaa 19631339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 115
Target Start/End: Original strand, 5123290 - 5123390
Alignment:
Q  15 gaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaact 114  Q
    |||||||||||| |||||||||||| ||||         ||||| ||||||| ||||||||||||||||||||||||| |||||||| ||  ||||||||    
T  5123290 gaatatttttaaaatattaaatttttataattttttttagtagataattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaact 5123389  T
Q  115 a 115  Q
    |    
T  5123390 a 5123390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 20678759 - 20678831
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt 126  Q
    ||||||||||||||||||||||||||||| |||||||||  ||  ||| ||  ||||||||||||||||||||    
T  20678759 gtagagaattgaaaatatcaaagataaaatatatgcattgatatatgtgtcagagtcaactagatcatttatt 20678831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 28152080 - 28152008
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt 126  Q
    ||||||||||||| |||||||| |||||||||||||||| ||| |||| ||  |||||||||| |||||||||    
T  28152080 gtagagaattgaagatatcaaatataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatt 28152008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 54 - 142
Target Start/End: Complemental strand, 23256024 - 23255934
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagtaa 142  Q
    ||||||||||||| |||||||| |||||| ||||||||| |||||||| ||  |||||||||| |||| ||||  || |||||||||||||    
T  23256024 gtagagaattgaagatatcaaatataaaatatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacggagggagtaa 23255934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 113
Target Start/End: Original strand, 51737130 - 51737184
Alignment:
Q  59 gaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaac 113  Q
    ||||||||||||| |||||||||||||||||||| |||||||| ||| |||||||    
T  51737130 gaattgaaaatataaaagataaaacatatgcattggtacgtgtgtcggagtcaac 51737184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 116
Target Start/End: Complemental strand, 53568487 - 53568381
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||| | |||||||||||||||||         ||| ||||||||| |||||||||||||||||||||||||  || |||| ||| |||    
T  53568487 tcgatgaatattttttaaatattaaattttcataaaattttttagtaaagaattgaagatatcaaagataaaacatatgcattgatatgtgtgtcggagt 53568388  T
Q  110 caactag 116  Q
    |||||||    
T  53568387 caactag 53568381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 141
Target Start/End: Original strand, 5744256 - 5744344
Alignment:
Q  55 tagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    |||||||||||| |||||||||||||||||||| ||||  || |||| ||  |||||||||| |||||||||  || ||||||||||||    
T  5744256 tagagaattgaagatatcaaagataaaacatatacattgatatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 5744344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 144
Target Start/End: Complemental strand, 6494677 - 6494585
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagtaatt 144  Q
    ||||||||||||| |||| ||||||||||||||||||||  || |||| ||  |||||||||| |||||||||  || ||||||| |||||||    
T  6494677 gtagagaattgaagatattaaagataaaacatatgcattgatatgtgtgtcagagtcaactaggtcatttatttagggacggaggaagtaatt 6494585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 39260303 - 39260376
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttattg 127  Q
    ||||||||||||| ||||||||||||||| ||||| ||| |||| ||| ||  ||||||||||||||| |||||    
T  39260303 gtagagaattgaagatatcaaagataaaatatatgtattggtacatgtgtcagagtcaactagatcatctattg 39260376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 127
Target Start/End: Original strand, 42187107 - 42187224
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||| ||||         |||||||||| || ||||||||||||||| ||||||||| |||||| | ||  |||    
T  42187107 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattaaagatatcaaagataaaatatatgcattggtacgtatgtcagagt 42187206  T
Q  110 caactagatcatttattg 127  Q
    |||||| ||||| |||||    
T  42187207 caactaaatcatctattg 42187224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 55997247 - 55997146
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||| ||||||||||||          |||||||||||| |||||||||||||||| |||||||| |||||||| ||| |||    
T  55997247 tcgatgaatatttttaaaatataaaattttcataattttttttaatagagaattgaagatatcaaagataaaacgtatgcattggtacgtgtgtcggagt 55997148  T
Q  110 ca 111  Q
    ||    
T  55997147 ca 55997146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 115
Target Start/End: Original strand, 23603780 - 23603880
Alignment:
Q  15 gaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaact 114  Q
    |||||||||||| |||||||||||||||||         ||| | ||||||| ||||||||||||||||| ||||||| |||||||| ||  ||||||||    
T  23603780 gaatatttttaaaatattaaattttcataattttttttcgtaaaaaattgaagatatcaaagataaaacagatgcattggtacgtgtgtcagagtcaact 23603879  T
Q  115 a 115  Q
    |    
T  23603880 a 23603880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 55 - 127
Target Start/End: Original strand, 55190887 - 55190959
Alignment:
Q  55 tagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttattg 127  Q
    |||| ||||||| ||||||||||||||||||||||||| ||| |||| ||  |||||||||| |||| |||||    
T  55190887 tagataattgaagatatcaaagataaaacatatgcattggtaagtgtgtcagagtcaactaggtcatctattg 55190959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 92
Target Start/End: Complemental strand, 49768534 - 49768496
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcatt 92  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  49768534 gtagagaattgaagatatcaaagataaaacatatgcatt 49768496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 26659972 - 26659862
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||||||||          |||||||||||| ||||||||| ||||||||||||| |  ||| ||| ||| |||    
T  26659972 tcgatgaatatttttaaaatattaaattttcataatttttttat-tagagaattgaagatatcaaagctaaaacatatgcagtgatacatgtgtcggagt 26659874  T
Q  110 caactagatcat 121  Q
    ||||||| ||||    
T  26659873 caactaggtcat 26659862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 27976744 - 27976781
Alignment:
Q  56 agagaattgaaaatatcaaagataaaacatatgcatta 93  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  27976744 agagaattgaagatattaaagataaaacatatgcatta 27976781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 4300005 - 4300074
Alignment:
Q  55 tagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcattta 124  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  4300005 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcattta 4300074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 16048171 - 16048103
Alignment:
Q  55 tagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcattt 123  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  16048171 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcattt 16048103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 55 - 143
Target Start/End: Complemental strand, 39405852 - 39405762
Alignment:
Q  55 tagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcattta--ttggaacggagggagtaat 143  Q
    |||||||||||| |||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||   ||| ||||||||||||||    
T  39405852 tagagaattgaagatattaaagataaaacatatgcattggtacgtgtctcgaagtcaactagatcatttaatatgggacggagggagtaat 39405762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 970271 - 970157
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| ||||||| |||||||||          |||||||||||| ||| ||||||||||||||||||||| |||||||| |||||||    
T  970271 tcgatgaatatttttaaaatattaagttttcataattttttttaatagagaattgaagataacaaagataaaacatatgcattggtacgtgtgtcgaagt 970172  T
Q  110 caactagatcattta 124  Q
    |||||||||||||||    
T  970171 caactagatcattta 970157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 58 - 124
Target Start/End: Complemental strand, 43067314 - 43067248
Alignment:
Q  58 agaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcattta 124  Q
    ||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  43067314 agaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcattta 43067248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 54 - 142
Target Start/End: Complemental strand, 37516233 - 37516143
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagtaa 142  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||| ||  ||||||||||||||| ||||  || |||||||||||||    
T  37516233 gtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagatcatctattgagggacggagggagtaa 37516143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 10 - 141
Target Start/End: Original strand, 41411285 - 41411419
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnng-gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaag 108  Q
    |||| |||||||||||| |||||||||||||||||          ||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||    
T  41411285 tcgatgaatatttttaaaatattaaattttcataattttttttttgtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaag 41411384  T
Q  109 tcaactagatcatttatt--ggaacggagggagta 141  Q
    |||||||  |||| ||||  || ||||||||||||    
T  41411385 tcaactaagtcatctattgagggacggagggagta 41411419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 54 - 142
Target Start/End: Complemental strand, 42148396 - 42148306
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagtaa 142  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| ||  ||||||||||||||||||||  || |||||||||||||    
T  42148396 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttatttagggacggagggagtaa 42148306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 19889743 - 19889681
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactag 116  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  19889743 gtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtatcggagtcaactag 19889681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 22613837 - 22613951
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| ||||||| |||||||||          |||| ||||||| ||||||||||||||||||||||||| |||||||| || ||||    
T  22613837 tcgatgaatatttttaaaatattaagttttcataattttttttaatagaaaattgaagatatcaaagataaaacatatgcattggtacgtgtgtctaagt 22613936  T
Q  110 caactagatcattta 124  Q
    |||||||||||||||    
T  22613937 caactagatcattta 22613951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 10 - 127
Target Start/End: Original strand, 37843703 - 37843820
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||||||||         ||||||||||||| |||||||| |||||||||||||||| |||||||| ||  |||    
T  37843703 tcgatgaatatttttaaaatattaaattttcataatttttttttgtagagaattgaagatatcaaatataaaacatatgcattggtacgtgtgtcagagt 37843802  T
Q  110 caactagatcatttattg 127  Q
    ||||||| |||| |||||    
T  37843803 caactaggtcatctattg 37843820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 142
Target Start/End: Complemental strand, 1830788 - 1830653
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnng-gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaag 108  Q
    |||| |||||||||||| |||||||||||||||||          ||||||||||||| ||||||||||||||||||||||||| |||| ||| ||||||    
T  1830788 tcgatgaatatttttaaaatattaaattttcataattttttttttgtagagaattgaagatatcaaagataaaacatatgcattggtacatgtgtcgaag 1830689  T
Q  109 tcaactagatcatttatt--ggaacggagggagtaa 142  Q
    |||||||  |||| ||||  || |||||||||||||    
T  1830688 tcaactaagtcatctattgagggacggagggagtaa 1830653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 14475406 - 14475478
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt 126  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||| ||| |||||||||| |||| ||||    
T  14475406 gtagagaattgaagatatcaaagataaaacatatgcatttgtacgtgtgtcggagtcaactaggtcatctatt 14475478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 143
Target Start/End: Original strand, 30779879 - 30780008
Alignment:
Q  15 gaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaact 114  Q
    |||||||||||| |||||||||||||||||        | ||| |||||||| |||| |||||||||||||||| ||| |||||||| ||| ||||||||    
T  30779879 gaatatttttaaaatattaaattttcataatttttttag-tagtgaattgaagatatgaaagataaaacatatgtattggtacgtgtgtcggagtcaact 30779977  T
Q  115 agatcatttatt--ggaacggagggagtaat 143  Q
    || |||| ||||  |||||||||||||||||    
T  30779978 aggtcatctattgaggaacggagggagtaat 30780008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 141
Target Start/End: Complemental strand, 40316255 - 40316121
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnng-gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaag 108  Q
    |||| |||||||||||| |||||||||||||||||          ||||||||||||| ||||||||||||||||||||||||| |||| ||| ||||||    
T  40316255 tcgatgaatatttttaaaatattaaattttcataattttttttttgtagagaattgaagatatcaaagataaaacatatgcattggtacatgtgtcgaag 40316156  T
Q  109 tcaactagatcatttatt--ggaacggagggagta 141  Q
    |||||||  |||| ||||  || ||||||||||||    
T  40316155 tcaactaagtcatctattgagggacggagggagta 40316121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 42421774 - 42421707
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcat 121  Q
    ||||||||||||| ||||||||||||||||||||||||  |||||||| ||| |||||||||||||||    
T  42421774 gtagagaattgaagatatcaaagataaaacatatgcataggtacgtgtgtcggagtcaactagatcat 42421707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 141
Target Start/End: Original strand, 4924966 - 4925099
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||| ||||         ||||||||||||| ||||||||||||||||||||||||| |||||||| ||   ||    
T  4924966 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagggt 4925065  T
Q  110 caactagatcatttatt--ggaacggagggagta 141  Q
    ||||||| |||| ||||  || ||||||||||||    
T  4925066 caactaggtcatctattgagggacggagggagta 4925099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 141
Target Start/End: Original strand, 5213050 - 5213183
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||| ||||         ||||||||||||| |||| |||||||||||||||||||| |||||||| ||  |||    
T  5213050 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatattaaagataaaacatatgcattggtacgtgtgtcagagt 5213149  T
Q  110 caactagatcatttatt--ggaacggagggagta 141  Q
    ||||||| ||| |||||  || ||||||||||||    
T  5213150 caactaggtcacttattcagggacggagggagta 5213183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 141
Target Start/End: Complemental strand, 35290419 - 35290286
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||| ||||         ||||||||||||| ||||||||||||||| ||||||||| |||||||| ||  |||    
T  35290419 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaatatatgcattggtacgtgtgtcagagt 35290320  T
Q  110 caactagatcatttatt--ggaacggagggagta 141  Q
    ||||||| |||| ||||  || ||||||||||||    
T  35290319 caactaggtcatctattgagggacggagggagta 35290286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 54 - 141
Target Start/End: Original strand, 35448169 - 35448258
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| ||  |||||||||| |||||||||  || ||||||||||||    
T  35448169 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 35448258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 115
Target Start/End: Original strand, 19868814 - 19868918
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||||||||        | |||| ||||||||||| ||||||||||||||||||||| |||||||| ||| |||    
T  19868814 tcgatgaatatttttaaaatattaaattttcataatatttttag-tagacaattgaaaatagcaaagataaaacatatgcattggtacgtgtgtcggagt 19868912  T
Q  110 caacta 115  Q
    ||||||    
T  19868913 caacta 19868918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 43517232 - 43517305
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttattg 127  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||| ||  |||||||||| |||| |||||    
T  43517232 gtagagaattgatgatatcaaagataaaacatatgcattagtacgtgtgtcagagtcaactaggtcatctattg 43517305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 54 - 142
Target Start/End: Complemental strand, 23988668 - 23988578
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagtaa 142  Q
    ||||| ||||||| ||||||||||||||||||||||||| ||| |||| ||  |||||||||| |||||||||  || |||||||||||||    
T  23988668 gtagataattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtaa 23988578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 29627357 - 29627268
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||||| |||||||||||||||||||||||||  || |||| ||  |||||||||| |||||||||  || ||||||||||||    
T  29627357 gtagagaattgaagatatcaaagataaaacatatgcattgatatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 29627268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 38698052 - 38697963
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| ||  |||||| ||| |||||||||  || ||||||||||||    
T  38698052 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaattaggtcatttatttagggacggagggagta 38697963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 39894870 - 39894781
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| || | ||  |||||||||||||| |||||  || ||||||||||||    
T  39894870 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtatgtcagagtcaactagatcacttatttagggacggagggagta 39894781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 141
Target Start/End: Original strand, 40512852 - 40512941
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| ||  |||||||||| ||| |||||  || ||||||||||||    
T  40512852 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcacttatttagggacggagggagta 40512941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 54 - 140
Target Start/End: Complemental strand, 5364509 - 5364421
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagt 140  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| ||  |||||||||| ||| |||||  || |||||||||||    
T  5364509 gtagagaattgaatatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcacttatttagggacggagggagt 5364421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 32334815 - 32334884
Alignment:
Q  57 gagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt 126  Q
    |||||||||| ||||||||||||||||||||||||| ||| |||| ||  |||||||||| |||||||||    
T  32334815 gagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatt 32334884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 10 - 115
Target Start/End: Complemental strand, 39036543 - 39036438
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||| ||||         ||||||||||||| |||||||||||||||||||| |||| |||||||| ||  |||    
T  39036543 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatacattggtacgtgtgtcagagt 39036444  T
Q  110 caacta 115  Q
    ||||||    
T  39036443 caacta 39036438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 32002186 - 32002258
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt 126  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| || | ||  |||||| |||||||||||||    
T  32002186 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtatgtcagagtcaagtagatcatttatt 32002258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 25563633 - 25563522
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||| ||||         ||| | ||||||| ||||||||||||||||||||||||| | |||||| | |||||    
T  25563633 tcgatgaatatttttaaaatattaaatttttataatttgttttagtataaaattgaagatatcaaagataaaacatatgcattggaacgtgtgttgaagt 25563534  T
Q  110 caactagatcat 121  Q
    ||||||| ||||    
T  25563533 caactaggtcat 25563522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 121
Target Start/End: Complemental strand, 15268198 - 15268132
Alignment:
Q  55 tagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcat 121  Q
    |||||||||||| |||| ||| ||||||||||||||||| ||||||| ||| ||||||||| |||||    
T  15268198 tagagaattgaagatattaaaaataaaacatatgcattaatacgtgtgtcggagtcaactaaatcat 15268132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 141
Target Start/End: Complemental strand, 2864087 - 2863954
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| ||||||| |||||||||         ||||||||||||| |||||||||||||| | |||  ||| |||| |||  || |||    
T  2864087 tcgatgaatatttttaaaatattaagttttcataattttttttagtagagaattgaagatatcaaagataaagcgtatatattggtacatgtgacggagt 2863988  T
Q  110 caactagatcatttat--tggaacggagggagta 141  Q
    |||||||||||| |||  |||||||||| |||||    
T  2863987 caactagatcatctattctggaacggagtgagta 2863954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 9e-23; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 31127933 - 31128047
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| ||||||| |||||||||          |||||||||||| ||||||||||||||||||||||||| |||||||| |||||||    
T  31127933 tcgatgaatatttttaaaatattaagttttcataattttttttaatagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagt 31128032  T
Q  110 caactagatcattta 124  Q
    |||||| ||||||||    
T  31128033 caactaaatcattta 31128047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 10 - 127
Target Start/End: Original strand, 13138260 - 13138377
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||| ||||         ||||||||||||| ||||||||||||||||||||||||| |||||||| ||  |||    
T  13138260 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagt 13138359  T
Q  110 caactagatcatttattg 127  Q
    ||||||| ||||||||||    
T  13138360 caactaggtcatttattg 13138377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 18809364 - 18809295
Alignment:
Q  55 tagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcattta 124  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||    
T  18809364 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaactcaactagatcattta 18809295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 10 - 142
Target Start/End: Complemental strand, 29791075 - 29790941
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||| ||||         ||||||||||||| ||||||||||||||||||||||||| ||| |||| ||  |||    
T  29791075 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagt 29790976  T
Q  110 caactagatcatttatt--ggaacggagggagtaa 142  Q
    ||||||| |||||||||  || |||||||||||||    
T  29790975 caactaggtcatttatttagggacggagggagtaa 29790941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 141
Target Start/End: Original strand, 8351008 - 8351141
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||| ||||         ||||||||||||| ||||||||||||||||||||||| | |||||||| ||  |||    
T  8351008 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcactggtacgtgtgtcagagt 8351107  T
Q  110 caactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||| |||||  || ||||||||||||    
T  8351108 caactagatcacttatttagggacggagggagta 8351141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 44123801 - 44123695
Alignment:
Q  15 gaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaact 114  Q
    |||||||||||| |||||||||||||||||         ||||||||||||| || ||||||||||||||||||||||  ||||||| ||| ||||||||    
T  44123801 gaatatttttaaaatattaaattttcataattttttttagtagagaattgaagatttcaaagataaaacatatgcattgatacgtgtgtcggagtcaact 44123702  T
Q  115 agatcat 121  Q
    |||||||    
T  44123701 agatcat 44123695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 10 - 115
Target Start/End: Complemental strand, 12893664 - 12893559
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||||||||         ||||||||||||| |||||||||||||||||||||||||  ||||||| ||| |||    
T  12893664 tcgatgaatatttttaaaatattaaattttcataattttttttagtagagaattgaagatatcaaagataaaacatatgcattgatacgtgtgtcggagt 12893565  T
Q  110 caacta 115  Q
    ||||||    
T  12893564 caacta 12893559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 142
Target Start/End: Original strand, 1580893 - 1581027
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||| ||||         ||||||||||||| ||||||||||||||| |||||||||  ||||||| ||  |||    
T  1580893 tcgatgaatatttttaaaatattaaatttttataaatttttttagtagagaattgaagatatcaaagataaaatatatgcattgatacgtgtgtcagagt 1580992  T
Q  110 caactagatcatttatt--ggaacggagggagtaa 142  Q
    ||||||| |||||||||  || |||||||||||||    
T  1580993 caactaggtcatttattcagggacggagggagtaa 1581027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 55 - 143
Target Start/End: Complemental strand, 11854612 - 11854522
Alignment:
Q  55 tagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcattta--ttggaacggagggagtaat 143  Q
    |||||||||||| |||||||| |||||| ||||||||| |||||||| ||||||||||||||||| ||||   ||| ||||||||||||||    
T  11854612 tagagaattgaagatatcaaaaataaaatatatgcattggtacgtgtgtcgaagtcaactagatcgtttaatatgggacggagggagtaat 11854522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 54 - 141
Target Start/End: Original strand, 3293274 - 3293363
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||||| ||||||||||||||||||||||||| |||  ||| ||  ||||||||||||||||||||  || ||||||||||||    
T  3293274 gtagagaattgaagatatcaaagataaaacatatgcattggtatatgtgtcagagtcaactagatcatttatttagggacggagggagta 3293363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 40013740 - 40013651
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| ||  |||||||||| |||||||||  || ||||||||||||    
T  40013740 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttattaagggacggagggagta 40013651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 127
Target Start/End: Complemental strand, 6470978 - 6470861
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| |||||||||||| ||||         ||||||||||||| |||||||||||||||||||||||||  ||||||| ||  |||    
T  6470978 tcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattgatacgtgtgtcagagt 6470879  T
Q  110 caactagatcatttattg 127  Q
    ||||||| |||| |||||    
T  6470878 caactaggtcatatattg 6470861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 141
Target Start/End: Complemental strand, 38845288 - 38845200
Alignment:
Q  55 tagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||| ||  |||||||||| |||||||||  || ||||||||||||    
T  38845288 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 38845200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 126
Target Start/End: Complemental strand, 45253882 - 45253766
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgt-atcgaag 108  Q
    |||| |||||||||||| |||||||||||||||||        | |||||||||||| |||||||| |||||||||||||||| ||||||||  ||| ||    
T  45253882 tcgatgaatatttttaaaatattaaattttcataattttttttg-tagagaattgaagatatcaaaaataaaacatatgcattggtacgtgtcgtcggag 45253784  T
Q  109 tcaactagatcatttatt 126  Q
    ||||||||||||| ||||    
T  45253783 tcaactagatcatctatt 45253766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 14522508 - 14522396
Alignment:
Q  15 gaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaact 114  Q
    |||||||||||| |||||||||||| ||||         ||||||||||||| |||||||||||||||||||||||||  ||||||| |  || ||||||    
T  14522508 gaatatttttaaaatattaaatttttataaatttttttagtagagaattgaagatatcaaagataaaacatatgcattgatacgtgtgttaaaatcaact 14522409  T
Q  115 agatcatttattg 127  Q
    ||||||| |||||    
T  14522408 agatcatctattg 14522396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 23764623 - 23764695
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacg-tgtatcgaagtcaactagatcatttat 125  Q
    ||||||||||||| |||||||| |||||||||||||||| ||||| ||| |||||||||||||||| ||||||    
T  23764623 gtagagaattgaatatatcaaatataaaacatatgcattggtacgttgtgtcgaagtcaactagattatttat 23764695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 143
Target Start/End: Complemental strand, 45081901 - 45081810
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagtaat 143  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| ||  |||||||||| | |||||||  || ||||||||||||||    
T  45081901 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggttatttatttagggacggagggagtaat 45081810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 30290013 - 30289924
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| || | ||  |||||||||| |||||||||  || ||||||||||||    
T  30290013 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtatgtcagagtcaactaggtcatttatttagggacggagggagta 30289924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 30380619 - 30380530
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| ||  |||||| ||||||| |||||  || ||||||||||||    
T  30380619 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaattagatcacttatttagggacggagggagta 30380530  T

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Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 126
Target Start/End: Complemental strand, 43066212 - 43066144
Alignment:
Q  58 agaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt 126  Q
    ||||||||| ||||||||||||||||||||||||| ||| |||| ||  |||||||||| |||||||||    
T  43066212 agaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatt 43066144  T

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Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 54 - 113
Target Start/End: Original strand, 886239 - 886298
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaac 113  Q
    |||||||||| || ||||||||||||||||||||||||| |||||||| ||| |||||||    
T  886239 gtagagaattaaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaac 886298  T

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Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 38739745 - 38739674
Alignment:
Q  55 tagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt 126  Q
    |||||||||||| |||| |||||||||||||||||||| ||| |||| ||  |||||||||| |||||||||    
T  38739745 tagagaattgaagatattaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatt 38739674  T

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Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 141
Target Start/End: Original strand, 2805648 - 2805737
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| || | ||  |||||||| | |||||||||  || ||||||||||||    
T  2805648 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtatgtcagagtcaactgggtcatttatttagggacggagggagta 2805737  T

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Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 25256423 - 25256353
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcattta 124  Q
    ||||||||||||| |||||||||||||||||| |||||| |||   || ||| ||||||||||||||||||    
T  25256423 gtagagaattgaagatatcaaagataaaacatttgcattggtataagtgtcggagtcaactagatcattta 25256353  T

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Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 141
Target Start/End: Complemental strand, 37709987 - 37709899
Alignment:
Q  55 tagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    |||||||||||| |||||||||||||||||||| |||| ||| |||| |   |||||||||| |||||||||  || ||||||||||||    
T  37709987 tagagaattgaagatatcaaagataaaacatatacattggtatgtgtgttagagtcaactaggtcatttatttagggacggagggagta 37709899  T

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Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 92
Target Start/End: Complemental strand, 23248866 - 23248828
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcatt 92  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  23248866 gtagagaattgaatatatcaaagataaaacatatgcatt 23248828  T

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Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 10658067 - 10658006
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaacta 115  Q
    ||||||||||||| |||||||||||||||||||||  || |||| ||| ||| |||||||||    
T  10658067 gtagagaattgaagatatcaaagataaaacatatgtgttggtacatgtgtcggagtcaacta 10658006  T

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Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 2986427 - 2986356
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt 126  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||| |||| ||  |||||||||| ||| |||||    
T  2986427 gtagagaattgaagatatcaa-gataaaacatatgcattggtatgtgtgtcagagtcaactaggtcacttatt 2986356  T

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Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 39361214 - 39361128
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||||| |||||||| |||||||||||||||| ||| |||| ||  |||   ||||||||||||||  ||||||||| |||||    
T  39361214 gtagagaattgaagatatcaaaaataaaacatatgcattggtatgtgtgtcagagt---ctagatcatttatttaggaacggagagagta 39361128  T

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Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 121
Target Start/End: Complemental strand, 14847295 - 14847232
Alignment:
Q  58 agaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcat 121  Q
    |||||| || ||||||||||||||||||||||||| || ||||| ||| | |||||||| ||||    
T  14847295 agaattaaagatatcaaagataaaacatatgcattggtgcgtgtgtcggaatcaactaggtcat 14847232  T

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Target: scaffold0366 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 54 - 143
Target Start/End: Complemental strand, 14148 - 14057
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagtaat 143  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||||  |||||||||| ||| |||||  || ||||||||||||||    
T  14148 gtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtatcagagtcaactaggtcacttatttagggacggagggagtaat 14057  T

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Target: scaffold0366; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 143
Target Start/End: Complemental strand, 10482 - 10391
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagtaat 143  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||| ||  |||||||||| ||| |||||  || ||||||||||||||    
T  10482 gtagagaattgaagatatcaaagataaaacatatgcattagtatgtgtgtcagagtcaactaggtcacttatttagggacggagggagtaat 10391  T

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Target: scaffold0051 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 54 - 144
Target Start/End: Original strand, 41389 - 41481
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagtaatt 144  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||| ||  |||||||||| |||||||||  || |||||||||||||||    
T  41389 gtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttattgagggacggagggagtaatt 41481  T

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Target: scaffold0459 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 143
Target Start/End: Complemental strand, 12841 - 12750
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagtaat 143  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||| ||  |||||||||| ||| |||||  || ||||||||||||||    
T  12841 gtagagaattgaagatatcaaagataaaacatatgcattagtatgtgtgtcagagtcaactaggtcacttatttagggacggagggagtaat 12750  T

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Target: scaffold0111 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 38488 - 38599
Alignment:
Q  10 tcgaagaatatttttaagatattaaattttcataannnnnnnnggtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagt 109  Q
    |||| |||||||||||| ||||||||||||||||          ||||| ||||||| ||||||||||||||||||||||||| |||||| | |||||||    
T  38488 tcgatgaatatttttaaaatattaaattttcatagttttttttagtagataattgaagatatcaaagataaaacatatgcattggtacgtatgtcgaagt 38587  T
Q  110 caactagatcat 121  Q
    |||||| |||||    
T  38588 caactaaatcat 38599  T

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Target: scaffold0092 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 141
Target Start/End: Original strand, 44280 - 44369
Alignment:
Q  54 gtagagaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagta 141  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| | || ||  |||||||||| |||||||||  || ||||||||||||    
T  44280 gtagagaattgaagatatcaaagataaaacatatgcattggtatgcgtgtcagagtcaactaggtcatttatttagggacggagggagta 44369  T

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Target: scaffold0340 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 127
Target Start/End: Complemental strand, 14430 - 14361
Alignment:
Q  58 agaattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttattg 127  Q
    ||||||||| ||||||||||||||||||||| ||||||| || | ||| | |||||||||| ||||||||    
T  14430 agaattgaagatatcaaagataaaacatatgtattagtaagtatgtcggaatcaactagattatttattg 14361  T

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Target: scaffold0027 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 142
Target Start/End: Complemental strand, 117404 - 117320
Alignment:
Q  60 aattgaaaatatcaaagataaaacatatgcattagtacgtgtatcgaagtcaactagatcatttatt--ggaacggagggagtaa 142  Q
    ||||||| |||| ||||||||||||||||||||  || |||| ||  ||||||||||||||||||||  || |||||||||||||    
T  117404 aattgaagatattaaagataaaacatatgcattgatatgtgtgtcagagtcaactagatcatttatttagggacggagggagtaa 117320  T

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