View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1955_low_15 (Length: 230)

Name: NF1955_low_15
Description: NF1955
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1955_low_15
NF1955_low_15
[»] chr6 (8 HSPs)
chr6 (75-230)||(23998197-23998352)
chr6 (75-230)||(16380550-16380705)
chr6 (75-230)||(16648146-16648301)
chr6 (75-230)||(1646991-1647146)
chr6 (75-230)||(14130418-14130573)
chr6 (75-224)||(16099958-16100113)
chr6 (146-230)||(23025923-23026007)
chr6 (88-230)||(14643664-14643803)
[»] scaffold0225 (1 HSPs)
scaffold0225 (75-230)||(25510-25665)
[»] scaffold0162 (2 HSPs)
scaffold0162 (75-230)||(15024-15179)
scaffold0162 (75-230)||(11209-11364)
[»] chr8 (11 HSPs)
chr8 (75-230)||(16875570-16875725)
chr8 (75-230)||(21848812-21848967)
chr8 (83-230)||(20650830-20650977)
chr8 (75-230)||(22436454-22436609)
chr8 (83-228)||(23902323-23902468)
chr8 (75-230)||(23155517-23155670)
chr8 (75-230)||(21195015-21195169)
chr8 (135-218)||(16414302-16414385)
chr8 (97-220)||(19869866-19869989)
chr8 (110-198)||(24631173-24631261)
chr8 (111-185)||(23887215-23887289)
[»] chr7 (13 HSPs)
chr7 (75-230)||(7825974-7826129)
chr7 (75-230)||(27105815-27105970)
chr7 (75-230)||(27172355-27172510)
chr7 (75-230)||(17925724-17925879)
chr7 (85-230)||(13378969-13379112)
chr7 (75-230)||(4442002-4442157)
chr7 (75-230)||(13458109-13458264)
chr7 (86-224)||(15716950-15717088)
chr7 (88-193)||(17143354-17143459)
chr7 (97-229)||(39188-39320)
chr7 (88-145)||(12204904-12204961)
chr7 (88-145)||(14262349-14262406)
chr7 (93-185)||(48813338-48813430)
[»] chr5 (5 HSPs)
chr5 (75-230)||(23507683-23507838)
chr5 (75-230)||(24583209-24583364)
chr5 (75-230)||(21935402-21935557)
chr5 (88-219)||(20250509-20250640)
chr5 (111-143)||(21337595-21337627)
[»] chr3 (8 HSPs)
chr3 (75-230)||(8272670-8272825)
chr3 (75-230)||(30139520-30139675)
chr3 (75-230)||(30149071-30149226)
chr3 (75-230)||(13965623-13965778)
chr3 (75-230)||(15611817-15611972)
chr3 (75-230)||(15948741-15948896)
chr3 (75-230)||(6151124-6151279)
chr3 (75-215)||(25768032-25768172)
[»] chr1 (7 HSPs)
chr1 (75-230)||(20829496-20829651)
chr1 (75-230)||(20927154-20927309)
chr1 (75-230)||(20527153-20527308)
chr1 (83-230)||(41215960-41216107)
chr1 (127-230)||(22133860-22133963)
chr1 (90-215)||(21200998-21201123)
chr1 (172-230)||(35930929-35930987)
[»] scaffold0076 (1 HSPs)
scaffold0076 (75-230)||(42374-42529)
[»] chr2 (8 HSPs)
chr2 (75-230)||(24829760-24829915)
chr2 (75-230)||(22279821-22279976)
chr2 (75-230)||(24568240-24568395)
chr2 (75-230)||(25130325-25130480)
chr2 (75-230)||(22760141-22760296)
chr2 (88-207)||(10037927-10038046)
chr2 (88-207)||(10098312-10098431)
chr2 (88-145)||(23112465-23112522)
[»] scaffold0302 (2 HSPs)
scaffold0302 (75-230)||(327-482)
scaffold0302 (75-230)||(7269-7424)
[»] chr4 (5 HSPs)
chr4 (75-230)||(15291190-15291345)
chr4 (76-215)||(12340912-12341051)
chr4 (88-145)||(15323315-15323372)
chr4 (112-185)||(14696235-14696308)
chr4 (88-145)||(15072457-15072514)
[»] scaffold0266 (1 HSPs)
scaffold0266 (83-230)||(7896-8043)
[»] scaffold0124 (1 HSPs)
scaffold0124 (75-230)||(5841-5998)
[»] scaffold0022 (1 HSPs)
scaffold0022 (78-227)||(8864-9013)
[»] scaffold0218 (2 HSPs)
scaffold0218 (75-230)||(1987-2142)
scaffold0218 (75-230)||(26443-26598)
[»] scaffold0170 (1 HSPs)
scaffold0170 (75-230)||(34201-34356)
[»] scaffold0077 (1 HSPs)
scaffold0077 (75-230)||(26301-26456)
[»] scaffold0008 (2 HSPs)
scaffold0008 (75-230)||(132524-132679)
scaffold0008 (130-230)||(25938-26038)
[»] scaffold1488 (1 HSPs)
scaffold1488 (75-230)||(838-993)
[»] scaffold0692 (1 HSPs)
scaffold0692 (75-230)||(1919-2074)
[»] scaffold0561 (1 HSPs)
scaffold0561 (75-230)||(7040-7195)
[»] scaffold0369 (1 HSPs)
scaffold0369 (103-230)||(6888-7015)
[»] scaffold0120 (1 HSPs)
scaffold0120 (75-230)||(24292-24447)
[»] scaffold0387 (1 HSPs)
scaffold0387 (75-221)||(16174-16320)
[»] scaffold0610 (1 HSPs)
scaffold0610 (83-230)||(6964-7111)
[»] scaffold0467 (1 HSPs)
scaffold0467 (75-230)||(1656-1811)
[»] scaffold0092 (1 HSPs)
scaffold0092 (75-230)||(223-378)
[»] scaffold0021 (3 HSPs)
scaffold0021 (75-230)||(21882-22037)
scaffold0021 (75-230)||(31458-31613)
scaffold0021 (75-183)||(7330-7438)
[»] scaffold0876 (1 HSPs)
scaffold0876 (83-230)||(981-1128)
[»] scaffold0462 (1 HSPs)
scaffold0462 (137-230)||(2117-2210)
[»] scaffold0635 (1 HSPs)
scaffold0635 (88-207)||(9024-9143)
[»] scaffold0719 (1 HSPs)
scaffold0719 (157-219)||(4785-4847)
[»] scaffold0585 (1 HSPs)
scaffold0585 (88-145)||(5209-5266)
[»] scaffold0058 (1 HSPs)
scaffold0058 (166-229)||(76630-76693)
[»] scaffold0465 (1 HSPs)
scaffold0465 (183-217)||(13673-13707)
[»] scaffold0083 (1 HSPs)
scaffold0083 (111-185)||(9114-9188)
[»] scaffold0827 (1 HSPs)
scaffold0827 (112-185)||(5259-5332)
[»] scaffold0730 (1 HSPs)
scaffold0730 (88-145)||(121-178)
[»] scaffold0029 (1 HSPs)
scaffold0029 (88-145)||(114688-114745)
[»] scaffold0026 (1 HSPs)
scaffold0026 (88-145)||(50939-50996)
[»] scaffold0016 (1 HSPs)
scaffold0016 (88-145)||(176464-176521)
[»] scaffold0270 (2 HSPs)
scaffold0270 (111-143)||(6023-6055)
scaffold0270 (111-143)||(13153-13185)


Alignment Details
Target: chr6 (Bit Score: 152; Significance: 1e-80; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 75 - 230
Target Start/End: Original strand, 23998197 - 23998352
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23998197 caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 23998296  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23998297 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 23998352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 75 - 230
Target Start/End: Complemental strand, 16380705 - 16380550
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16380705 caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggtgcattagatactccaaatggcatcacagaatactca 16380606  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16380605 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 16380550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 75 - 230
Target Start/End: Complemental strand, 16648301 - 16648146
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16648301 caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 16648202  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16648201 tagtgtccatacctcgttcggaacgcagttttggatatatcttctgcctttactct 16648146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 75 - 230
Target Start/End: Complemental strand, 1647146 - 1646991
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1647146 caccacaaaacggtccagataaggatgaaatattctattcatatattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 1647047  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1647046 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgccttcactct 1646991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 75 - 230
Target Start/End: Original strand, 14130418 - 14130573
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| ||||||||| ||||||||||||| |||||||||| |||||||| ||||||||| || |||| |||| |||||||| ||||||| ||||||||    
T  14130418 caccacaaaacggtccaaataaggatgaaatgttctattcatatattccatgaagacacctagcacattggataatccaaatgacatcacataatactca 14130517  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||| ||||||||||||||| ||||| ||||||||||||||||||||||| |||||    
T  14130518 tagtatccatacctcgttcgaaacgcggttttggatatatcttccgccttcactct 14130573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 75 - 224
Target Start/End: Original strand, 16099958 - 16100113
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataa------agacacctggcgcattagatactccaaatggcatcacagaa 168  Q
    ||||||| ||||||||| ||| |||||||||||||||||||| || |||||||      ||||||||||| ||||||| |||||||||||||| ||| ||    
T  16099958 caccacaaaacggtccaaatatggatgaaatattctattcatatactccataaagataaagacacctggcacattagacactccaaatggcattacataa 16100057  T
Q  169 tactcatagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctt 224  Q
    |||||||||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  16100058 tactcatagtgtccatacctcgttcgtaacgatgttttggatatatcttccgcctt 16100113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 23026007 - 23025923
Alignment:
Q  146 atactccaaatggcatcacagaatactcatagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||| |||||    
T  23026007 atactccaaatggcatcacagaatactcatagtgtccatacctcgttcgagacgtagttttggatatatcttccgccttcactct 23025923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 88 - 230
Target Start/End: Complemental strand, 14643803 - 14643664
Alignment:
Q  88 tccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtccatacc 187  Q
    |||| ||||||||| || ||||||||||| |||||||| ||||||||  |||||| ||  || |||||||||||||||||||| ||  |||||||||| |    
T  14643803 tccaaataaggatggaagattctattcatatattccatgaagacaccatgcgcatcagtaacaccaaatggcatcacagaata-tc--agtgtccatatc 14643707  T
Q  188 tcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    | |||||||| ||||| ||||| ||||| |||| ||| |||||    
T  14643706 tagttcggaatgcagtcttggaaatatcctccgtcttcactct 14643664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 75 - 230
Target Start/End: Original strand, 25510 - 25665
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25510 caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggtgcattagatactccaaatggcatcacagaatactca 25609  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25610 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 25665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 148; Significance: 3e-78; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 75 - 230
Target Start/End: Original strand, 15024 - 15179
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15024 caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggtgcattagatactccaaatggcatcacagaatactca 15123  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15124 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 15179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 75 - 230
Target Start/End: Complemental strand, 11364 - 11209
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  11364 caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagacactccaaatggcatcaaagaatactca 11265  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||||||||||||| |||||||| || ||||||||||||||||||||||| |||||    
T  11264 tagtgtccataccttgttcggaatgcggttttggatatatcttccgccttcactct 11209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 148; Significance: 3e-78; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 75 - 230
Target Start/End: Complemental strand, 16875725 - 16875570
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16875725 caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 16875626  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16875625 tagtgtccatacctcgttcggaacgcagttttggatatatcttctgcctttactct 16875570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 75 - 230
Target Start/End: Complemental strand, 21848967 - 21848812
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21848967 caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 21848868  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  21848867 tagtgtccataccttgttcggaacgcagttttggatatatctttcgcctttactct 21848812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 83 - 230
Target Start/End: Complemental strand, 20650977 - 20650830
Alignment:
Q  83 aacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtcc 182  Q
    |||||||||||||||||| ||||||||||||||| || || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20650977 aacggtccagataaggataaaatattctattcatatactctatgaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtcc 20650878  T
Q  183 atacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||    
T  20650877 atacctcgttcggaacgctgttttggatatatcttctgcctttactct 20650830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 75 - 230
Target Start/End: Original strand, 22436454 - 22436609
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  22436454 caccacaaaacggtccagataaggatgaaatattctattcatttattccattaagacacctggcgcattggatactccaaatggcatcacagaatactca 22436553  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    || ||||||||||| ||||||||||| |||||||||||||||||||| || |||||    
T  22436554 tactgtccataccttgttcggaacgcggttttggatatatcttccgctttcactct 22436609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 83 - 228
Target Start/End: Original strand, 23902323 - 23902468
Alignment:
Q  83 aacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtcc 182  Q
    ||||||||||| |||||||||||||||||||||| |||||||| ||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||    
T  23902323 aacggtccagaaaaggatgaaatattctattcatatattccatgaagacacctagtgcattggatactccaaatggcatcacagaatactcatagtgtcc 23902422  T
Q  183 atacctcgttcggaacgcagttttggatatatcttccgcctttact 228  Q
    || ||||||| ||||||| |||||||||||||||||| ||||||||    
T  23902423 atgcctcgtttggaacgcggttttggatatatcttccacctttact 23902468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 75 - 230
Target Start/End: Complemental strand, 23155670 - 23155517
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| ||||||||| |||||||||||||||||||||||| |||||||| ||||||||| ||||||| | | |||||||||||||||||||||||||     
T  23155670 caccacaaaacggtccaaataaggatgaaatattctattcatatattccatgaagacacctagcgcattgggtgctccaaatggcatcacagaatactc- 23155572  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
     ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  23155571 -agtgtccatacctcgttcggaacgcggttttggatatatcttccgccttcactct 23155517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 75 - 230
Target Start/End: Complemental strand, 21195169 - 21195015
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||| |||  ||||||| ||||| ||||||||||| |||||||| ||||||||    
T  21195169 caccacaaaacggtccagataaggatgaaatattctattcatatattccatgaagt-acctggcacattatatactccaaattgcatcacaaaatactca 21195071  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||||||||||||| ||||||||| | ||||||||||||||||||||||| |||||    
T  21195070 tagtgtccataccttgttcggaacacggttttggatatatcttccgccttcactct 21195015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 135 - 218
Target Start/End: Original strand, 16414302 - 16414385
Alignment:
Q  135 tggcgcattagatactccaaatggcatcacagaatactcatagtgtccatacctcgttcggaacgcagttttggatatatcttc 218  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||    
T  16414302 tggcgcattggatattccaaatggcatcacagaatactcatagtgtccataccttgttcggaatgcggttttggatatatcttc 16414385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 97 - 220
Target Start/End: Original strand, 19869866 - 19869989
Alignment:
Q  97 ggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtccatacctcgttcgga 196  Q
    ||||| || ||||| ||||| || |||||||| || |||||||| || || |||||||| |||||||| ||||||||||| || ||||| |  |||| ||    
T  19869866 ggatggaaaattctgttcatatactccataaacactcctggcgcgttggacactccaaaaggcatcactgaatactcataatgaccataacgggttctga 19869965  T
Q  197 acgcagttttggatatatcttccg 220  Q
    | ||||| || |||||||||||||    
T  19869966 aggcagtcttcgatatatcttccg 19869989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 198
Target Start/End: Complemental strand, 24631261 - 24631173
Alignment:
Q  110 tattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtccatacctcgttcggaac 198  Q
    ||||||||||||||||||| |  ||| || ||||||  || ||||||| ||| ||||||||||||||||| | |||||| |||| ||||    
T  24631261 tattcatgtattccataaataatcctagcacattagtcacaccaaatgacattacagaatactcatagtgactatacctagttcagaac 24631173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 23887215 - 23887289
Alignment:
Q  111 attcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtccata 185  Q
    ||||||||| |||||||| ||| ||||||||||||  || || || |||||||| |||||||| || ||||||||    
T  23887215 attcatgtactccataaacacatctggcgcattagtaacaccgaaaggcatcactgaatactcgtaatgtccata 23887289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 148; Significance: 3e-78; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 75 - 230
Target Start/End: Original strand, 7825974 - 7826129
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  7825974 caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggtgcattagatactccaaatggcatcacagaatactca 7826073  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7826074 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 7826129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 75 - 230
Target Start/End: Complemental strand, 27105970 - 27105815
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27105970 caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggtgcattagatactccaaatggcatcacagaatactca 27105871  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27105870 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 27105815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 75 - 230
Target Start/End: Original strand, 27172355 - 27172510
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27172355 caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggtgcattagatactccaaatggcatcacagaatactca 27172454  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27172455 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 27172510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 75 - 230
Target Start/End: Original strand, 17925724 - 17925879
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| ||||||| ||| |||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17925724 caccacaaaacggtctagaaaaggatgaaatattctattcatatattccatgaagacacctggcgcattggatactccaaatggcatcacagaatactca 17925823  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    ||||||||||||||| |||| ||||| ||||||||||||||||||| ||| |||||    
T  17925824 tagtgtccatacctcattcgaaacgcggttttggatatatcttccgtcttcactct 17925879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 85 - 230
Target Start/End: Original strand, 13378969 - 13379112
Alignment:
Q  85 cggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtccat 184  Q
    |||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||    
T  13378969 cggtccagataaggatgaaatattctattcatatatttcatgaagacacctggcgcattggatactccaaatggcatcacagaatactc--agtgtccat 13379066  T
Q  185 acctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||    
T  13379067 acctcgttcggaacgcggttttggatatatcttccgccttcactct 13379112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 75 - 230
Target Start/End: Original strand, 4442002 - 4442157
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| ||||||||||| ||||||| |||||| ||||||| |||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||     
T  4442002 caccacaaaacggtccagaaaaggatggaatattatattcatatattccatgaagacacctggcgcattggatactccgaatggcatcacagaatactct 4442101  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||||| |||||||||  |||||||| |||||||||||||||||||||||||||||    
T  4442102 tagtgttcatacctcgaccggaacgcggttttggatatatcttccgcctttactct 4442157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 75 - 230
Target Start/End: Original strand, 13458109 - 13458264
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| |||| ||| || ||||||| ||| |||||||||| |||||||| ||||||||||||||||| ||||||||||||| ||||||| ||||||||    
T  13458109 caccacaaaacgatcctgaaaaggatggaatgttctattcatatattccatgaagacacctggcgcattggatactccaaatgacatcacaaaatactca 13458208  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||||||||||||| ||||||||| | |||| ||||||||||| |||||| |||||    
T  13458209 tagtgtccataccttgttcggaacacggtttcggatatatctttcgccttcactct 13458264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 86 - 224
Target Start/End: Complemental strand, 15717088 - 15716950
Alignment:
Q  86 ggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtccata 185  Q
    |||||||| ||||||| |||||||||||||| |||||||| |||||||  ||| |||||| ||  ||||||||||| |||||||| |||||||| |||||    
T  15717088 ggtccagaaaaggatggaatattctattcatatattccatgaagacactaggcacattagttagaccaaatggcattacagaatattcatagtgaccata 15716989  T
Q  186 cctcgttcggaacgcagttttggatatatcttccgcctt 224  Q
     || |||||||||||||||||||||||||| ||||||||    
T  15716988 tctagttcggaacgcagttttggatatatcctccgcctt 15716950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 88 - 193
Target Start/End: Complemental strand, 17143459 - 17143354
Alignment:
Q  88 tccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtccatacc 187  Q
    |||| ||||||||| || ||||||||||| |||||||| |||||||| |||| |||||  || ||||||| |||| ||||||| ||||||||||||||||    
T  17143459 tccaaataaggatggaagattctattcatatattccatgaagacaccgggcgtattagtcacaccaaatgacatcgcagaatattcatagtgtccatacc 17143360  T
Q  188 tcgttc 193  Q
    ||||||    
T  17143359 tcgttc 17143354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 97 - 229
Target Start/End: Complemental strand, 39320 - 39188
Alignment:
Q  97 ggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtccatacctcgttcgga 196  Q
    ||||| || ||||| ||||| || |||||||| || |||||||| || || |||||||| |||||||| ||||||||||| || ||||| |  |||| ||    
T  39320 ggatggaaaattctgttcatatactccataaaaactcctggcgcgttggacactccaaaaggcatcaccgaatactcataatgaccataacgggttctga 39221  T
Q  197 acgcagttttggatatatcttccgcctttactc 229  Q
    | ||||| ||  |||||||||||| ||| ||||    
T  39220 aggcagtcttcaatatatcttccgacttcactc 39188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 145
Target Start/End: Complemental strand, 12204961 - 12204904
Alignment:
Q  88 tccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattag 145  Q
    |||||||||| ||| || |||||||||||||| |||||||| ||||| ||||||||||    
T  12204961 tccagataagcatggaaaattctattcatgtactccataaacacaccaggcgcattag 12204904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 145
Target Start/End: Complemental strand, 14262406 - 14262349
Alignment:
Q  88 tccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattag 145  Q
    |||||||||| ||| || ||||||||||| || |||||||| ||||| ||||||||||    
T  14262406 tccagataagcatggaaaattctattcatatactccataaacacaccaggcgcattag 14262349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 185
Target Start/End: Complemental strand, 48813430 - 48813338
Alignment:
Q  93 ataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtccata 185  Q
    ||||| |||||| || | ||||||||| |||||||| |||| |||||||||||  || || || |||||||| ||||| || || ||||||||    
T  48813430 ataagcatgaaaaatacaattcatgtactccataaacacacttggcgcattagtaacaccgaaaggcatcactgaatattcgtaatgtccata 48813338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 148; Significance: 3e-78; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 75 - 230
Target Start/End: Original strand, 23507683 - 23507838
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23507683 caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggtgcattagatactccaaatggcatcacagaatactca 23507782  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23507783 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 23507838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 75 - 230
Target Start/End: Original strand, 24583209 - 24583364
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24583209 caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 24583308  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  24583309 tagtgtccatacctcgttcggaacgcagttttggatatatcttttgcctttactct 24583364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 75 - 230
Target Start/End: Complemental strand, 21935557 - 21935402
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  21935557 caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggtgcattagatactccaaatggcatcacagaatactca 21935458  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  21935457 tagtgtccataccttgttcggaacgcagttttggatatatcttctgcctttactct 21935402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 88 - 219
Target Start/End: Complemental strand, 20250640 - 20250509
Alignment:
Q  88 tccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtccatacc 187  Q
    |||| ||||||||| || || |||||||| ||||||||||||  ||||| | | |||| ||| ||||||||||| | | |||||||||| ||||||||||    
T  20250640 tccaaataaggatggaaaatcctattcatatattccataaagttacctgacacgttagttacaccaaatggcataataaaatactcataatgtccatacc 20250541  T
Q  188 tcgttcggaacgcagttttggatatatcttcc 219  Q
    | ||||| |||||||| || || |||||||||    
T  20250540 ttgttcgaaacgcagtcttagaaatatcttcc 20250509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 143
Target Start/End: Complemental strand, 21337627 - 21337595
Alignment:
Q  111 attcatgtattccataaagacacctggcgcatt 143  Q
    |||||||||||||||||| ||||||||||||||    
T  21337627 attcatgtattccataaacacacctggcgcatt 21337595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 148; Significance: 3e-78; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 75 - 230
Target Start/End: Complemental strand, 8272825 - 8272670
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8272825 caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 8272726  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  8272725 tagtgtccatacctcgttcggaacgcagttttggatatatcttctgcctttactct 8272670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 75 - 230
Target Start/End: Original strand, 30139520 - 30139675
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  30139520 caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggtgcattagatactccaaatggcatcacagaatactca 30139619  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30139620 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 30139675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 75 - 230
Target Start/End: Original strand, 30149071 - 30149226
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  30149071 caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggtgcattagatactccaaatggcatcacagaatactca 30149170  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30149171 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 30149226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 75 - 230
Target Start/End: Complemental strand, 13965778 - 13965623
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13965778 caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattggatactccaaatggcatcacagaatactca 13965679  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  13965678 tagtgtccatacctcgttcggaacgcagttttggatatatctaccgcctttactct 13965623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 75 - 230
Target Start/End: Original strand, 15611817 - 15611972
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15611817 caccacaaaacggtccagataaggatgaaatattctattcatatattccataaagacacctggtgcattagatactccaaatggcatcacagaatactca 15611916  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15611917 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgccttcactct 15611972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 75 - 230
Target Start/End: Complemental strand, 15948896 - 15948741
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| | ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  15948896 caccacaaatcggtccaaataaggatgaaatattctattcatatattccataaagacacctggcgcattggatactccaaatggcatcacggaatactca 15948797  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15948796 tagtgtccatacctcgttcggaacgcggttttggatatatcttccgcctttactct 15948741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 75 - 230
Target Start/End: Complemental strand, 6151279 - 6151124
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| ||||||| |||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6151279 caccacaaaacggtctagataaggatgaaatattttattcatatactccataaagacacctggcgcattagatactccaaatggcatcacaaaatactca 6151180  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||    
T  6151179 tagtgtccatacctcgttcggaacacagttttggatatatcttctgccttcactct 6151124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 75 - 215
Target Start/End: Original strand, 25768032 - 25768172
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||    
T  25768032 caccacaaaacggtccagataaggatgaaatattctattcatatattccatgaagacacctggcgaattagatactccgaatggcatcacagaatactca 25768131  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatc 215  Q
    |||||||||||||| ||| ||||||| ||||||||||||||    
T  25768132 tagtgtccataccttgtttggaacgcggttttggatatatc 25768172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 148; Significance: 3e-78; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 75 - 230
Target Start/End: Complemental strand, 20829651 - 20829496
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20829651 caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggtgcattagatactccaaatggcatcacagaatactca 20829552  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20829551 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 20829496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 75 - 230
Target Start/End: Original strand, 20927154 - 20927309
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20927154 caccacaaaactgtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 20927253  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20927254 tagtgtccatacctcgttcggaacgcggttttggatatatcttccgcctttactct 20927309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 75 - 230
Target Start/End: Original strand, 20527153 - 20527308
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20527153 caccacaaaacggtccagataaggatgaaatattctattcatgtattctataaagacacctggtgcattagatactccaaatggcatcacagaatactca 20527252  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    ||||||||||||||||||||||| || ||||||||| ||||||| ||||| |||||    
T  20527253 tagtgtccatacctcgttcggaatgcggttttggatttatcttctgccttcactct 20527308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 83 - 230
Target Start/End: Complemental strand, 41216107 - 41215960
Alignment:
Q  83 aacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtcc 182  Q
    ||||||||||| |||||||||||||||||||||| |||| ||| || |||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  41216107 aacggtccagaaaaggatgaaatattctattcatatattgcatgaaaacacctggcgcattggatactccaaatggcatcacagaatactcatagtttcc 41216008  T
Q  183 atacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||||||||||||||||| |||||||||||||||| | |||| |||||    
T  41216007 atacctcgttcggaacgcggttttggatatatcttacaccttcactct 41215960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 127 - 230
Target Start/End: Complemental strand, 22133963 - 22133860
Alignment:
Q  127 aagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtccatacctcgttcggaacgcagttttggatatatcttccgccttta 226  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||| || ||||||||||||||||||||||    
T  22133963 aagacacctggcgcattggatactccaaatggcatcacagaatactcatagtgtccatacctcgttcataacgcggtcttggatatatcttccgccttta 22133864  T
Q  227 ctct 230  Q
    ||||    
T  22133863 ctct 22133860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 90 - 215
Target Start/End: Complemental strand, 21201123 - 21200998
Alignment:
Q  90 cagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtccatacctc 189  Q
    ||||||||||||||||||||||||||| |||||||| |||||||  |||| |||||  || | |||||||||||||||||| |||||||| ||||| |||    
T  21201123 cagataaggatgaaatattctattcatatattccatgaagacactcggcgtattagtcacactaaatggcatcacagaatattcatagtgaccatatctc 21201024  T
Q  190 gttcggaacgcagttttggatatatc 215  Q
    ||||||||||||||||||||||||||    
T  21201023 gttcggaacgcagttttggatatatc 21200998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 35930987 - 35930929
Alignment:
Q  172 tcatagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  35930987 tcatagtgtccatacctcgttcggaacgtggttttggatatatcttccgccttcactct 35930929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 144; Significance: 7e-76; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 75 - 230
Target Start/End: Original strand, 42374 - 42529
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  42374 caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctagcgcattagatactccaaatggcatcacaaaatactca 42473  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42474 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 42529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 144; Significance: 7e-76; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 75 - 230
Target Start/End: Complemental strand, 24829915 - 24829760
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24829915 caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 24829816  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  24829815 tagtgtccatacctcgttcgaaacgcggttttggatatatcttccgcctttactct 24829760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 75 - 230
Target Start/End: Original strand, 22279821 - 22279976
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22279821 caccacaaaacggtccagataaggataaaatattctattcatgtattccataaagacacatggcgcattagatactccaaatggcatcacagaatactca 22279920  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||||||||||||||||||||||||| ||||||||||||| ||| | |||||||||    
T  22279921 tagtgtccatacctcgttcggaacgctgttttggatatatattcagtctttactct 22279976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 75 - 230
Target Start/End: Complemental strand, 24568395 - 24568240
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| |||||||||||||||||||||||||||||||||| || ||||| ||||||||||  ||||||||||||||||||||||||||||||||||||    
T  24568395 caccacaaaacggtccagataaggatgaaatattctattcatatactccatgaagacacctgatgcattagatactccaaatggcatcacagaatactca 24568296  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||||||||||||| ||| ||||||  ||||||||||||||||||||||| |||||    
T  24568295 tagtgtccataccttgtttggaacgtggttttggatatatcttccgccttcactct 24568240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 75 - 230
Target Start/End: Original strand, 25130325 - 25130480
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| | ||||||||  |||||||||||||||||||||| |||||||  ||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  25130325 caccacaaagcggtccaggaaaggatgaaatattctattcatatattccaggaagacacctggcgcattggatactccaaatggcatcatagaatactca 25130424  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  25130425 tagtgtccatacctcgttcggaacgcggttttggatatatcttccgccttcactct 25130480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 75 - 230
Target Start/End: Complemental strand, 22760296 - 22760141
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| |||||||||| ||||||||||||||||||||||| || ||||| ||||||||| ||||||  ||||||||||||||||||||||||||||||    
T  22760296 caccacaaaacggtccaggtaaggatgaaatattctattcatatactccatgaagacacctagcgcatcggatactccaaatggcatcacagaatactca 22760197  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||||||||||||| |||  |||| | ||||||||||||||||||||||| |||||    
T  22760196 tagtgtccataccttgttttgaacacggttttggatatatcttccgccttcactct 22760141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 88 - 207
Target Start/End: Complemental strand, 10038046 - 10037927
Alignment:
Q  88 tccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtccatacc 187  Q
    |||| ||||||||| || |||||||||||||||||||| ||||||||  |||||||||  || ||||||| ||||||| | || |||||||| |||||||    
T  10038046 tccaaataaggatggaagattctattcatgtattccatgaagacaccaagcgcattagtcacaccaaatgacatcacaaagtattcatagtgcccatacc 10037947  T
Q  188 tcgttcggaacgcagttttg 207  Q
    ||||||| || |||||||||    
T  10037946 tcgttcgaaatgcagttttg 10037927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 88 - 207
Target Start/End: Complemental strand, 10098431 - 10098312
Alignment:
Q  88 tccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtccatacc 187  Q
    |||| ||||||||| || |||||||||||||||||||| ||||||||  |||||||||  || ||||||| ||||||| | || |||||||| |||||||    
T  10098431 tccaaataaggatggaagattctattcatgtattccatgaagacaccaagcgcattagtcacaccaaatgacatcacaaagtattcatagtgcccatacc 10098332  T
Q  188 tcgttcggaacgcagttttg 207  Q
    ||||||| || |||||||||    
T  10098331 tcgttcgaaatgcagttttg 10098312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 145
Target Start/End: Original strand, 23112465 - 23112522
Alignment:
Q  88 tccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattag 145  Q
    |||||||||| ||| || |||||||||||||| |||||||| ||||  ||||||||||    
T  23112465 tccagataagcatggaaaattctattcatgtactccataaacacactaggcgcattag 23112522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 140; Significance: 2e-73; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 75 - 230
Target Start/End: Original strand, 327 - 482
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  327 caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaaaacacctggcgcattagatactccaaatgacatcacagaatactca 426  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  427 tagtgtccatacctcgttcggaacgcggttttggatatatcttccgcctttactct 482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 75 - 230
Target Start/End: Original strand, 7269 - 7424
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  7269 caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaaaacacctggcgcattagatactccaaatgacatcacagaatactca 7368  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  7369 tagtgtccatacctcgttcggaacgcggttttggatatatcttccgcctttactct 7424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 140; Significance: 2e-73; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 75 - 230
Target Start/End: Complemental strand, 15291345 - 15291190
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15291345 caccacaaaatggtccagataaggatgaaatattttattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 15291246  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15291245 tagtgtccatacctcgttcggaacgcagttttggatatatcttctgcctttactct 15291190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 76 - 215
Target Start/End: Complemental strand, 12341051 - 12340912
Alignment:
Q  76 accacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcat 175  Q
    |||||| ||| ||||||| ||||||| ||||| |||||||| |||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||    
T  12341051 accacaaaacagtccagaaaaggatggaatatcctattcatatattccatgaagacacctggcgcattagtcactccaaatggcatcacagaatactcat 12340952  T
Q  176 agtgtccatacctcgttcggaacgcagttttggatatatc 215  Q
    ||||||||| ||  ||||||||||| ||||||||||||||    
T  12340951 agtgtccattccctgttcggaacgcggttttggatatatc 12340912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 145
Target Start/End: Original strand, 15323315 - 15323372
Alignment:
Q  88 tccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattag 145  Q
    |||||||||| ||| || ||||||||||||||||||||||| ||||| ||||||||||    
T  15323315 tccagataagcatggaaaattctattcatgtattccataaacacaccaggcgcattag 15323372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 14696235 - 14696308
Alignment:
Q  112 ttcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtccata 185  Q
    |||||||| |||||||| |||||||||||||| |  || ||||| |||||||| ||||| | ||| ||||||||    
T  14696235 ttcatgtactccataaacacacctggcgcatttgtaacaccaaaaggcatcactgaatattaataatgtccata 14696308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 145
Target Start/End: Original strand, 15072457 - 15072514
Alignment:
Q  88 tccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattag 145  Q
    |||||||||| ||| || | |||||||||||| |||||||| ||||| ||||||||||    
T  15072457 tccagataagcatggaaaactctattcatgtactccataaacacaccaggcgcattag 15072514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 136; Significance: 4e-71; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 83 - 230
Target Start/End: Complemental strand, 8043 - 7896
Alignment:
Q  83 aacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtcc 182  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  8043 aacggtccagataaggatgaaatattctattcatgtattccataaagacacctggtgcattagatactccaaatggcatcacagaatactcatagtgtcc 7944  T
Q  183 atacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||    
T  7943 atacctcgttcggaacgcggttttggatatatctttcgcctttactct 7896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 75 - 230
Target Start/End: Complemental strand, 5998 - 5841
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattct-attcatgtattcca-taaagacacctggcgcattagatactccaaatggcatcacagaatact 172  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5998 caccacaaaacggtccagataaggatgaaatattcttattcatgtatttcaataaagacacctggcgcattagatactccaaatggcatcacagaatact 5899  T
Q  173 catagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5898 catagtgtccatacctcgttcggaacgcagttttggatatatcttctgcctttactct 5841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 78 - 227
Target Start/End: Complemental strand, 9013 - 8864
Alignment:
Q  78 cacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatag 177  Q
    |||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  9013 cacaaaacgatccagataaggatgaaatattctattcatgtatcccataaagacacctggtgcattagatactccaaatggcatcacagaatactcatag 8914  T
Q  178 tgtccatacctcgttcggaacgcagttttggatatatcttccgcctttac 227  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  8913 tgtccatacctcgttcgaaacgcggttttggatatatcttccgcctttac 8864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 124; Significance: 6e-64; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 75 - 230
Target Start/End: Complemental strand, 2142 - 1987
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2142 caccacaaaatggtccagataaggatgaaatattctattcatttattccataaagacacctggtgcattagatactccaaatggcatcacagaatactca 2043  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    ||||||| ||||||||||||||| || ||||||||||||||||||||||| |||||    
T  2042 tagtgtctatacctcgttcggaatgcggttttggatatatcttccgccttcactct 1987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 75 - 230
Target Start/End: Original strand, 26443 - 26598
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| ||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  26443 caccacaaaacggtccagaaaaggatgaaatattctattcatatattccatgaagacacctggcgcattagatactctaaatgacatcacagaatactca 26542  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||||||||||||| |||||||| || || |||||||||||||||||||| |||||    
T  26543 tagtgtccataccttgttcggaaagcggtattggatatatcttccgccttcactct 26598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 75 - 230
Target Start/End: Original strand, 34201 - 34356
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| |||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  34201 caccacaaaacggtccagataaggatgaaatattctattcatatactccatgaagacacctggcgcattggatactccaaatggcatcacagaatactca 34300  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||    
T  34301 tagtgtccatacctcgttcgaaacgcggttttgggtatatcttccgcctttactct 34356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 75 - 230
Target Start/End: Complemental strand, 26456 - 26301
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| |||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  26456 caccacaaaacggtccagataaggatgaaatactctattcatgcattccagaaagacacctggcgcattagatactccaaatggcatcacaaaatactca 26357  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||    
T  26356 tagtgtccatacctcgttcggaacgcggttttggatatctcttccgccttcactct 26301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 120; Significance: 2e-61; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 75 - 230
Target Start/End: Complemental strand, 132679 - 132524
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  132679 caccacaaaacagtccagataaggataaaatattctattcatgtattccataaagacaccgggcgcattagatactccaaatggcatcacagagtactca 132580  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    ||||||||||| |||||||||||||| |||| |||||||||||| |||||||||||    
T  132579 tagtgtccatatctcgttcggaacgcggtttgggatatatcttcagcctttactct 132524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 130 - 230
Target Start/End: Original strand, 25938 - 26038
Alignment:
Q  130 acacctggcgcattagatactccaaatggcatcacagaatactcatagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactc 229  Q
    ||||||||||||||  |||||| |||||||||||||||||||||||||||||||||| ||||| ||||||| ||| ||||||||||||||||||| ||||    
T  25938 acacctggcgcattgcatactctaaatggcatcacagaatactcatagtgtccatacttcgtttggaacgcggttatggatatatcttccgccttcactc 26037  T
Q  230 t 230  Q
    |    
T  26038 t 26038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1488 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold1488
Description:

Target: scaffold1488; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 75 - 230
Target Start/End: Complemental strand, 993 - 838
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| || |||||| |||||||||||||||||||||||| |||||||| |||||| |||||||||| ||||||||||||||||||||||||||||||    
T  993 caccacaaaatggtccaaataaggatgaaatattctattcatatattccatgaagacaactggcgcattggatactccaaatggcatcacagaatactca 894  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  893 tagtgttcatacctcgttcggaacacagttttggatatatcttccgccttcactct 838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 75 - 230
Target Start/End: Complemental strand, 2074 - 1919
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| ||| |||||||||||||||||||||||||||||| || ||||| ||||||||||| |||||||||||||||||||||||||| |||||||||    
T  2074 caccacaaaacagtccagataaggatgaaatattctattcatatactccatgaagacacctggtgcattagatactccaaatggcatcaccgaatactca 1975  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||||||||||||||| || |||||| |||||||||||||||||||||||||||||    
T  1974 tagtgtccatacctcgatcagaacgcggttttggatatatcttccgcctttactct 1919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 75 - 230
Target Start/End: Complemental strand, 7195 - 7040
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| ||||||||| |||||||||||||||||||||||| |||||||| |||| |||||||||||| ||||||||||||||||||||||||||| ||    
T  7195 caccacaaaacggtccatataaggatgaaatattctattcatatattccatgaagatacctggcgcattggatactccaaatggcatcacagaataccca 7096  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||    
T  7095 tagtgtccatacctcgtttggaacgctgttttggatatatcttccgccttcactct 7040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 103 - 230
Target Start/End: Original strand, 6888 - 7015
Alignment:
Q  103 aatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtccatacctcgttcggaacgcag 202  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  6888 aatattctattcatgtattccataaagacacctggtgcattagatactccaaatggcatcacagaatactcatagtgtccatacctcgttcggaacgaag 6987  T
Q  203 ttttggatatatcttccgcctttactct 230  Q
    ||||| ||||||||||||||||||||||    
T  6988 ttttgaatatatcttccgcctttactct 7015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 75 - 230
Target Start/End: Original strand, 24292 - 24447
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| |||||||||||||||||||||||||||||||||| || |||| |||||||||| ||||||| |||||||||||||||||||||| |||||||    
T  24292 caccacaaaacggtccagataaggatgaaatattctattcatatactccacaaagacacctagcgcattcgatactccaaatggcatcacagcatactca 24391  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||    
T  24392 tagtgtccataccttgttcggaacgcggttttggatatatcttccgccttcactct 24447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 115; Significance: 1e-58; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 75 - 221
Target Start/End: Original strand, 16174 - 16320
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||| ||||||| ||||||||||||||||||||||    
T  16174 caccacaaaacggtccagataaggttgaaatattctattcatgtattccatgaagacacctgacgcattggatactcaaaatggcatcacagaatactca 16273  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgc 221  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||    
T  16274 tagtgtccatacctcgttcggaacgcggttttagatatatcttccgc 16320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 83 - 230
Target Start/End: Complemental strand, 7111 - 6964
Alignment:
Q  83 aacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtcc 182  Q
    |||||||||||||||||||||||||| ||||||| || || || ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  7111 aacggtccagataaggatgaaatattttattcatatactcaatgaagacacctggtgcattggatactccaaatggcatcacagaatactcatagtgtcc 7012  T
Q  183 atacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||    
T  7011 atacctcgttcggaacgctgttttggatatatcttccgccttcactct 6964  T

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Target: scaffold0467 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 75 - 230
Target Start/End: Complemental strand, 1811 - 1656
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| || |||||||||    
T  1811 caccacaaaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattggaaactccaaatggcattacggaatactca 1712  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||| ||||||||| ||||||||||| |||||||||| |||||| ||||| |||||    
T  1711 tagtttccataccttgttcggaacgcggttttggatacatcttctgccttcactct 1656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 75 - 230
Target Start/End: Original strand, 223 - 378
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| ||| || ||||||||||||||||||||||||||| || || || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  223 caccacaaaacagtacagataaggatgaaatattctattcatatactctatgaagacacctggcgcattagatactccaaatggcatcacagaatactca 322  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||||||||||||| |||||||||||  |||||||||||| ||||||||| |||||    
T  323 tagtgtccataccttgttcggaacgcgattttggatatatattccgccttcactct 378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 108; Significance: 2e-54; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 75 - 230
Target Start/End: Complemental strand, 22037 - 21882
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| ||| |||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||| ||||||  ||||||||||||| ||||||||    
T  22037 caccacaaaacagtccagataaggatgaaatattctattcatatattccatgaagacacctggtgcattggatactttaaatggcatcacataatactca 21938  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||| |||||    
T  21937 tagtgtccatacctcgttcggaacgcggttttgaatatatcttccgccttcactct 21882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 75 - 230
Target Start/End: Complemental strand, 31613 - 31458
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| ||| |||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||| ||||||  ||||||||||||| ||||||||    
T  31613 caccacaaaacagtccagataaggatgaaatattctattcatatattccatgaagacacctggtgcattggatactttaaatggcatcacataatactca 31514  T
Q  175 tagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||| |||||    
T  31513 tagtgtccatacctcgttcggaacgcggttttgaatatatcttccgccttcactct 31458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 75 - 183
Target Start/End: Original strand, 7330 - 7438
Alignment:
Q  75 caccacagaacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactca 174  Q
    ||||||| |||||| ||||||||||||||||||| ||||||| || ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  7330 caccacaaaacggttcagataaggatgaaatattatattcatatactccatgaagacacctggcgcattagatactccaaatggcatcacataatactca 7429  T
Q  175 tagtgtcca 183  Q
    |||||||||    
T  7430 tagtgtcca 7438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 83 - 230
Target Start/End: Complemental strand, 1128 - 981
Alignment:
Q  83 aacggtccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtcc 182  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  1128 aacggtccagataaggatgaaatattctattcatatattccatgaagatacctggcgcattggatactgcaaatggcatcacagaatactcatagtgtcc 1029  T
Q  183 atacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    ||||||||||||||||   ||||| | ||||||||||||||| |||||    
T  1028 atacctcgttcggaacatggttttaggtatatcttccgccttcactct 981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 137 - 230
Target Start/End: Original strand, 2117 - 2210
Alignment:
Q  137 gcgcattagatactccaaatggcatcacagaatactcatagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactct 230  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  2117 gcgcattagatactccaaatggcatcacataatactcatagtgtccatacctcgttcggaacacagttttggatatatcttccgccttcactct 2210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 88 - 207
Target Start/End: Original strand, 9024 - 9143
Alignment:
Q  88 tccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtccatacc 187  Q
    |||| ||||||||| || |||||||||||||||||||| ||||||||  |||||||||  || ||||||| ||||||| | || |||||||| |||||||    
T  9024 tccaaataaggatggaagattctattcatgtattccatgaagacaccaagcgcattagtcacaccaaatgacatcacaaagtattcatagtgcccatacc 9123  T
Q  188 tcgttcggaacgcagttttg 207  Q
    ||||||| || |||||||||    
T  9124 tcgttcgaaatgcagttttg 9143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0719 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0719
Description:

Target: scaffold0719; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 157 - 219
Target Start/End: Original strand, 4785 - 4847
Alignment:
Q  157 ggcatcacagaatactcatagtgtccatacctcgttcggaacgcagttttggatatatcttcc 219  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  4785 ggcatcatagaatactcatagtgtccatacctcgttcggaacgcggttttggatatatcttcc 4847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 145
Target Start/End: Complemental strand, 5266 - 5209
Alignment:
Q  88 tccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattag 145  Q
    |||||||||| ||| || |||||||||||||| |||||||| ||||| ||||||||||    
T  5266 tccagataagcatggaaaattctattcatgtactccataaacacaccaggcgcattag 5209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 229
Target Start/End: Original strand, 76630 - 76693
Alignment:
Q  166 gaatactcatagtgtccatacctcgttcggaacgcagttttggatatatcttccgcctttactc 229  Q
    ||||| ||| |||||||||| || || ||||| ||||||||||||||||  |||||||||||||    
T  76630 gaatattcaaagtgtccatatctagtccggaatgcagttttggatatatactccgcctttactc 76693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 13707 - 13673
Alignment:
Q  183 atacctcgttcggaacgcagttttggatatatctt 217  Q
    |||||||||||||||||| ||||||||||||||||    
T  13707 atacctcgttcggaacgcggttttggatatatctt 13673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 185
Target Start/End: Complemental strand, 9188 - 9114
Alignment:
Q  111 attcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtccata 185  Q
    ||||||||| |||||||| |||||||||||||| |  || || || |||||||| ||||| ||||| ||||||||    
T  9188 attcatgtactccataaacacacctggcgcatttgtaacaccgaaaggcatcactgaatattcataatgtccata 9114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0827 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0827
Description:

Target: scaffold0827; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 5259 - 5332
Alignment:
Q  112 ttcatgtattccataaagacacctggcgcattagatactccaaatggcatcacagaatactcatagtgtccata 185  Q
    ||||| || |||||||| || |||||||| || || |||||||| |||||||| ||||||||||| || |||||    
T  5259 ttcatatactccataaacactcctggcgcgttggacactccaaaaggcatcaccgaatactcataatgaccata 5332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 145
Target Start/End: Complemental strand, 178 - 121
Alignment:
Q  88 tccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattag 145  Q
    |||||||||| |||||| ||||||||||| || ||||| || ||||| ||||||||||    
T  178 tccagataagcatgaaaaattctattcatatactccatgaacacaccaggcgcattag 121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 145
Target Start/End: Original strand, 114688 - 114745
Alignment:
Q  88 tccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattag 145  Q
    ||||| |||| |||||| ||||||||||| |||||||| || ||||| ||||||||||    
T  114688 tccaggtaagcatgaaaaattctattcatatattccatgaacacaccaggcgcattag 114745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 145
Target Start/End: Original strand, 50939 - 50996
Alignment:
Q  88 tccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattag 145  Q
    |||||||| | |||||| ||||||||||| || |||||||| ||||| ||||||||||    
T  50939 tccagataggcatgaaaaattctattcatatactccataaacacaccaggcgcattag 50996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 145
Target Start/End: Complemental strand, 176521 - 176464
Alignment:
Q  88 tccagataaggatgaaatattctattcatgtattccataaagacacctggcgcattag 145  Q
    |||| ||||| ||| || |||||||||||||| |||||||| ||||| ||||||||||    
T  176521 tccaaataagcatggaaaattctattcatgtactccataaacacaccaggcgcattag 176464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 143
Target Start/End: Original strand, 6023 - 6055
Alignment:
Q  111 attcatgtattccataaagacacctggcgcatt 143  Q
    |||||||||||||||||| ||||||||||||||    
T  6023 attcatgtattccataaacacacctggcgcatt 6055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 143
Target Start/End: Original strand, 13153 - 13185
Alignment:
Q  111 attcatgtattccataaagacacctggcgcatt 143  Q
    |||||||||||||||||| ||||||||||||||    
T  13153 attcatgtattccataaacacacctggcgcatt 13185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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