View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19562_high_4 (Length: 364)
Name: NF19562_high_4
Description: NF19562
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19562_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 1 - 322
Target Start/End: Complemental strand, 25260885 - 25260566
Alignment:
| Q |
1 |
tcatttcgaatatgaacttttccatgaaaaaactaaatcagcaagctatcatcaaaagcttcatacggttcactaaaatgaaaactaatnnnnnnnnnnn |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25260885 |
tcatttcgaatatgaacttttccatgaaaaaactaaatcagcaagctatcatcaaaagcttcatacggttcactaaaatgaaaactaattatatatata- |
25260787 |
T |
|
| Q |
101 |
ncaaatacacacatcattttaattatatatattgaaataaactattttgtcatctaatatttttagttaattcaatatgtcatataatcaaaattgcaca |
200 |
Q |
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||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
25260786 |
-caaatacccacatcattttaattatatatattgaaataaactattttgtcatctaatatttttagttaattgaatatgtcatataatcaaaattgcaca |
25260688 |
T |
|
| Q |
201 |
tactgcacacaaatcattatctctcttcaatgtaaagctcaatctataaccttacctatcaattcataactaaatagaaaaatcctaaatatggatatac |
300 |
Q |
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|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
25260687 |
tactgcacacaaatcattatctctcttcaatgtagagctcaatctataaccttacctatcaattcataactaaatagaaaaatcctacatatggatatac |
25260588 |
T |
|
| Q |
301 |
atatttaaagtatagaagagta |
322 |
Q |
| |
|
|||||||||||||||| ||||| |
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| T |
25260587 |
atatttaaagtatagaggagta |
25260566 |
T |
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