View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19563_high_19 (Length: 399)

Name: NF19563_high_19
Description: NF19563
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19563_high_19
NF19563_high_19
[»] chr7 (41 HSPs)
chr7 (59-204)||(32884179-32884324)
chr7 (59-175)||(8675739-8675856)
chr7 (59-172)||(29893380-29893493)
chr7 (59-172)||(37972561-37972674)
chr7 (59-175)||(12740778-12740894)
chr7 (59-163)||(41827736-41827840)
chr7 (59-172)||(18838818-18838931)
chr7 (59-172)||(33891918-33892031)
chr7 (59-172)||(37328315-37328428)
chr7 (59-172)||(23101699-23101812)
chr7 (59-172)||(29614479-29614592)
chr7 (59-160)||(33383082-33383183)
chr7 (59-172)||(44256439-44256552)
chr7 (59-165)||(43172115-43172221)
chr7 (59-172)||(510054-510167)
chr7 (59-172)||(7993565-7993678)
chr7 (59-172)||(28034532-28034645)
chr7 (59-172)||(28342719-28342832)
chr7 (59-172)||(29585922-29586035)
chr7 (63-172)||(40460398-40460507)
chr7 (59-158)||(39028495-39028594)
chr7 (59-169)||(44121620-44121730)
chr7 (56-175)||(16709393-16709510)
chr7 (56-175)||(17683629-17683746)
chr7 (60-175)||(42610579-42610694)
chr7 (59-172)||(39784515-39784628)
chr7 (94-175)||(48136909-48136990)
chr7 (59-172)||(3023342-3023455)
chr7 (59-175)||(26201813-26201929)
chr7 (57-164)||(4639908-4640015)
chr7 (57-163)||(27148804-27148910)
chr7 (96-173)||(11735215-11735292)
chr7 (99-208)||(37915886-37915995)
chr7 (59-175)||(14741387-14741503)
chr7 (169-234)||(21486222-21486287)
chr7 (99-175)||(21024067-21024143)
chr7 (100-175)||(14732318-14732393)
chr7 (121-171)||(30823108-30823158)
chr7 (60-127)||(5772106-5772171)
chr7 (99-175)||(33497116-33497192)
chr7 (59-87)||(47067167-47067195)
[»] chr8 (32 HSPs)
chr8 (60-175)||(12522531-12522646)
chr8 (59-172)||(10295017-10295130)
chr8 (59-172)||(31625718-31625831)
chr8 (59-172)||(9288172-9288285)
chr8 (59-172)||(19717552-19717665)
chr8 (59-175)||(43166351-43166467)
chr8 (57-175)||(8029864-8029982)
chr8 (59-172)||(18305654-18305767)
chr8 (59-172)||(18958405-18958518)
chr8 (67-172)||(32497959-32498064)
chr8 (58-237)||(6388074-6388266)
chr8 (59-172)||(26856515-26856628)
chr8 (59-172)||(42305282-42305395)
chr8 (59-172)||(16364116-16364229)
chr8 (59-204)||(24082173-24082318)
chr8 (59-172)||(39467196-39467309)
chr8 (62-172)||(43308186-43308296)
chr8 (59-172)||(14781810-14781923)
chr8 (59-172)||(44725469-44725582)
chr8 (100-175)||(41393958-41394033)
chr8 (99-164)||(24067107-24067172)
chr8 (59-175)||(19484176-19484292)
chr8 (60-175)||(17234676-17234791)
chr8 (104-233)||(27878591-27878729)
chr8 (104-233)||(28018772-28018910)
chr8 (60-144)||(7760770-7760854)
chr8 (87-162)||(7466759-7466834)
chr8 (89-135)||(12522485-12522531)
chr8 (102-233)||(27915535-27915675)
chr8 (102-233)||(27961954-27962094)
chr8 (99-163)||(37131322-37131386)
chr8 (99-175)||(26620369-26620445)
[»] chr1 (47 HSPs)
chr1 (59-174)||(5494772-5494887)
chr1 (59-175)||(45272976-45273092)
chr1 (59-172)||(46328395-46328508)
chr1 (59-203)||(9322153-9322297)
chr1 (58-233)||(47371531-47371715)
chr1 (60-175)||(3583579-3583694)
chr1 (59-162)||(8140919-8141022)
chr1 (60-175)||(28403969-28404084)
chr1 (59-172)||(6312985-6313098)
chr1 (59-172)||(15834710-15834823)
chr1 (59-172)||(25612501-25612614)
chr1 (59-172)||(29396110-29396223)
chr1 (59-175)||(48966514-48966630)
chr1 (59-164)||(38535830-38535935)
chr1 (59-164)||(38558048-38558153)
chr1 (59-172)||(51702004-51702117)
chr1 (59-135)||(25830962-25831038)
chr1 (60-167)||(49971627-49971734)
chr1 (59-172)||(48177118-48177232)
chr1 (59-175)||(49453083-49453200)
chr1 (56-175)||(49236989-49237108)
chr1 (58-164)||(32760133-32760230)
chr1 (56-175)||(52182305-52182424)
chr1 (59-172)||(18798866-18798974)
chr1 (70-175)||(25253486-25253591)
chr1 (59-175)||(35177233-35177350)
chr1 (59-175)||(4005049-4005165)
chr1 (59-163)||(5209403-5209507)
chr1 (59-175)||(26757597-26757713)
chr1 (70-175)||(27257881-27257986)
chr1 (99-172)||(49231456-49231529)
chr1 (59-175)||(1243329-1243445)
chr1 (59-175)||(8147299-8147415)
chr1 (59-163)||(9192006-9192110)
chr1 (59-175)||(41353403-41353519)
chr1 (59-175)||(51106874-51106990)
chr1 (59-124)||(28387141-28387206)
chr1 (59-175)||(3593237-3593344)
chr1 (99-183)||(18954487-18954571)
chr1 (99-175)||(7798522-7798598)
chr1 (97-175)||(1108372-1108450)
chr1 (105-175)||(33886883-33886953)
chr1 (105-175)||(33957297-33957367)
chr1 (99-163)||(2293411-2293475)
chr1 (99-183)||(8122211-8122294)
chr1 (99-175)||(11579123-11579199)
chr1 (112-172)||(42304526-42304586)
[»] chr4 (43 HSPs)
chr4 (59-172)||(49501211-49501324)
chr4 (59-172)||(49507276-49507389)
chr4 (53-175)||(32889851-32889973)
chr4 (59-169)||(32322476-32322586)
chr4 (59-175)||(29510092-29510208)
chr4 (59-172)||(30967021-30967134)
chr4 (59-172)||(5800374-5800487)
chr4 (59-172)||(23987607-23987719)
chr4 (59-172)||(27768474-27768587)
chr4 (60-172)||(28484306-28484419)
chr4 (59-172)||(41725523-41725636)
chr4 (59-172)||(49834512-49834625)
chr4 (59-172)||(50018602-50018715)
chr4 (59-172)||(54341552-54341665)
chr4 (60-183)||(33138771-33138885)
chr4 (59-172)||(48261488-48261601)
chr4 (59-172)||(51321266-51321379)
chr4 (59-175)||(23671400-23671516)
chr4 (59-172)||(5441812-5441925)
chr4 (59-172)||(29855926-29856039)
chr4 (59-172)||(37828108-37828221)
chr4 (59-162)||(54853164-54853267)
chr4 (70-175)||(871782-871886)
chr4 (58-175)||(46286678-46286786)
chr4 (59-175)||(50517163-50517270)
chr4 (59-163)||(55165486-55165590)
chr4 (97-175)||(26491149-26491227)
chr4 (59-132)||(32683746-32683818)
chr4 (59-135)||(37916211-37916287)
chr4 (56-175)||(29469121-29469240)
chr4 (60-173)||(24966547-24966651)
chr4 (59-175)||(8084170-8084286)
chr4 (99-175)||(51967278-51967354)
chr4 (98-175)||(42937437-42937514)
chr4 (103-183)||(41470344-41470424)
chr4 (99-175)||(46862941-46863017)
chr4 (99-175)||(6487344-6487420)
chr4 (97-157)||(40487703-40487763)
chr4 (99-174)||(56424002-56424077)
chr4 (97-183)||(2326680-2326765)
chr4 (60-97)||(12754489-12754526)
chr4 (141-194)||(12754539-12754592)
chr4 (99-164)||(14334395-14334460)
[»] scaffold0110 (1 HSPs)
scaffold0110 (67-175)||(39311-39419)
[»] scaffold1128 (1 HSPs)
scaffold1128 (56-174)||(929-1047)
[»] scaffold0042 (1 HSPs)
scaffold0042 (59-172)||(57743-57856)
[»] chr3 (38 HSPs)
chr3 (59-172)||(52810766-52810879)
chr3 (64-172)||(20833310-20833418)
chr3 (59-175)||(21386508-21386624)
chr3 (59-213)||(48379558-48379721)
chr3 (59-172)||(37455255-37455368)
chr3 (59-172)||(52617651-52617764)
chr3 (61-172)||(17946638-17946749)
chr3 (59-162)||(18750051-18750154)
chr3 (60-170)||(7437600-7437710)
chr3 (59-172)||(31645940-31646053)
chr3 (59-172)||(51737366-51737479)
chr3 (59-172)||(54629259-54629372)
chr3 (59-163)||(44905543-44905647)
chr3 (59-172)||(23753068-23753181)
chr3 (59-172)||(26107737-26107850)
chr3 (59-172)||(39038498-39038611)
chr3 (68-242)||(33693226-33693409)
chr3 (59-172)||(40897539-40897652)
chr3 (59-144)||(50761807-50761892)
chr3 (59-172)||(50902988-50903101)
chr3 (102-243)||(16155168-16155318)
chr3 (60-174)||(43172889-43173003)
chr3 (58-175)||(4962755-4962872)
chr3 (59-164)||(7665552-7665657)
chr3 (71-175)||(45602441-45602545)
chr3 (59-135)||(45863231-45863307)
chr3 (59-172)||(36673831-36673944)
chr3 (59-175)||(49296077-49296193)
chr3 (59-175)||(8598620-8598736)
chr3 (60-160)||(21718452-21718552)
chr3 (99-174)||(25049872-25049947)
chr3 (99-235)||(49458359-49458504)
chr3 (59-175)||(42736268-42736384)
chr3 (99-172)||(22489511-22489584)
chr3 (59-175)||(53835923-53836039)
chr3 (97-175)||(53645337-53645415)
chr3 (99-175)||(9818588-9818664)
chr3 (99-175)||(40064279-40064355)
[»] chr2 (36 HSPs)
chr2 (59-163)||(214945-215049)
chr2 (59-172)||(6224256-6224369)
chr2 (58-175)||(15224190-15224307)
chr2 (59-172)||(28739973-28740086)
chr2 (59-172)||(7027313-7027426)
chr2 (59-172)||(25288573-25288686)
chr2 (59-175)||(34342199-34342315)
chr2 (60-175)||(40829596-40829713)
chr2 (59-172)||(10657840-10657953)
chr2 (59-172)||(28844995-28845108)
chr2 (59-163)||(13833107-13833211)
chr2 (59-169)||(379340-379450)
chr2 (70-239)||(2308665-2308843)
chr2 (59-172)||(33136028-33136139)
chr2 (59-172)||(3575251-3575364)
chr2 (59-172)||(26789195-26789308)
chr2 (58-237)||(31847171-31847360)
chr2 (59-162)||(18177681-18177784)
chr2 (58-175)||(18899952-18900069)
chr2 (60-124)||(3464051-3464115)
chr2 (99-175)||(35404343-35404419)
chr2 (114-242)||(18727595-18727732)
chr2 (99-175)||(3991774-3991850)
chr2 (99-183)||(12877687-12877771)
chr2 (99-175)||(15926379-15926455)
chr2 (102-165)||(11153384-11153447)
chr2 (99-175)||(19948539-19948615)
chr2 (99-175)||(33262854-33262930)
chr2 (99-175)||(38413478-38413554)
chr2 (97-175)||(13898475-13898553)
chr2 (97-175)||(14039092-14039170)
chr2 (97-163)||(32242242-32242308)
chr2 (97-175)||(32293912-32293989)
chr2 (70-175)||(3858446-3858551)
chr2 (60-135)||(43305035-43305111)
chr2 (59-87)||(43825299-43825327)
[»] chr6 (23 HSPs)
chr6 (57-175)||(16438665-16438783)
chr6 (59-237)||(2606856-2607043)
chr6 (59-172)||(7497507-7497620)
chr6 (59-172)||(30384743-30384856)
chr6 (59-175)||(31975675-31975791)
chr6 (59-172)||(31067841-31067954)
chr6 (59-172)||(14262115-14262228)
chr6 (59-172)||(34758758-34758871)
chr6 (59-172)||(4200130-4200243)
chr6 (59-172)||(31896046-31896159)
chr6 (62-194)||(28900842-28900965)
chr6 (60-164)||(3000202-3000306)
chr6 (59-175)||(1463694-1463810)
chr6 (59-175)||(6788061-6788177)
chr6 (57-175)||(10113803-10113921)
chr6 (110-200)||(33641286-33641376)
chr6 (99-175)||(31535083-31535159)
chr6 (99-183)||(7835379-7835463)
chr6 (97-163)||(13461372-13461438)
chr6 (59-125)||(34773807-34773872)
chr6 (99-175)||(8779604-8779680)
chr6 (99-175)||(31996271-31996347)
chr6 (100-175)||(21199556-21199631)
[»] chr5 (22 HSPs)
chr5 (59-169)||(1460828-1460938)
chr5 (59-172)||(4240145-4240258)
chr5 (59-172)||(4549937-4550050)
chr5 (59-172)||(13926341-13926454)
chr5 (59-172)||(37014264-37014377)
chr5 (59-213)||(34218430-34218584)
chr5 (56-175)||(16548869-16548988)
chr5 (59-172)||(5949522-5949634)
chr5 (60-172)||(40013384-40013496)
chr5 (70-175)||(29716815-29716920)
chr5 (59-172)||(39852780-39852893)
chr5 (59-175)||(5651211-5651327)
chr5 (61-177)||(15672703-15672819)
chr5 (59-172)||(13999773-13999886)
chr5 (59-175)||(7125189-7125305)
chr5 (55-175)||(37798144-37798263)
chr5 (60-163)||(21489862-21489965)
chr5 (99-180)||(25868800-25868881)
chr5 (99-175)||(2675098-2675174)
chr5 (59-175)||(28623191-28623307)
chr5 (102-175)||(21238783-21238856)
chr5 (99-135)||(29758707-29758743)
[»] scaffold1504 (1 HSPs)
scaffold1504 (59-172)||(1276-1389)
[»] scaffold0543 (1 HSPs)
scaffold0543 (59-172)||(10934-11047)
[»] scaffold0013 (1 HSPs)
scaffold0013 (59-242)||(89241-89424)
[»] scaffold0573 (1 HSPs)
scaffold0573 (62-194)||(8829-8952)
[»] scaffold0383 (1 HSPs)
scaffold0383 (126-172)||(16708-16754)
[»] scaffold0152 (2 HSPs)
scaffold0152 (126-172)||(20944-20990)
scaffold0152 (126-172)||(28811-28857)
[»] scaffold0246 (1 HSPs)
scaffold0246 (97-157)||(25642-25702)


Alignment Details
Target: chr7 (Bit Score: 94; Significance: 9e-46; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 59 - 204
Target Start/End: Original strand, 32884179 - 32884324
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||| ||||||||  |||||||||| ||||||||||    
T  32884179 caatgttccgtaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgagttaactctgaggtaaactctgtttctggta 32884278  T
Q  159 aaatcgaaaggtttgaccgagttaaaactcgataaattcgtgtaaa 204  Q
    |||||| |||||||||| ||||||| ||||| |||| |||||||||    
T  32884279 aaatcggaaggtttgactgagttaacactcggtaaactcgtgtaaa 32884324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 8675739 - 8675856
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggt- 157  Q
    ||||||| |||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||  |||||||||| |||||||||     
T  8675739 caatgtttcgcaaatcgagtgttaactctccgagattaccgagttaacgtttttaggtaccaaaatcgtgttaactctaaggtaaactcggtttctggta 8675838  T
Q  158 aaaatcgaaaggtttgac 175  Q
    ||||||||||||||||||    
T  8675839 aaaatcgaaaggtttgac 8675856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 29893380 - 29893493
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||| |||||| |||| ||||||||||||||||  ||||||||||||||||||||     
T  29893380 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaagtacaaaaatcgtgttaactctgaggtaaactcagtttctggtg 29893479  T
Q  159 aaatcgaaaggttt 172  Q
    ||||||||||||||    
T  29893480 aaatcgaaaggttt 29893493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 37972674 - 37972561
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||||||||||||||||||||| || ||| |||| |||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||    
T  37972674 caatgttccgcaaatcgagtgttaactttctgagattaccgagtttacgtttttaggtaccaaaatcgtgttaactctgagataaactcagtttctggta 37972575  T
Q  159 aaatcgaaaggttt 172  Q
    |||||| |||||||    
T  37972574 aaatcggaaggttt 37972561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 12740778 - 12740894
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||  |||||||||| || |||||||    
T  12740778 caatgttacgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtaccaaaatcgtgttaactctgaggtaaactcggtgtctggta 12740877  T
Q  159 aaatcgaaaggtttgac 175  Q
    |||| | ||||||||||    
T  12740878 aaattggaaggtttgac 12740894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 59 - 163
Target Start/End: Original strand, 41827736 - 41827840
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||||||||| |||||||||||||| ||| ||| ||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||    
T  41827736 caatgttccgcaaattgagtgttaactctctgagattattgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcagtttctggta 41827835  T
Q  159 aaatc 163  Q
    |||||    
T  41827836 aaatc 41827840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 18838818 - 18838931
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  18838818 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 18838917  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  18838918 aaattggaaggttt 18838931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 33892031 - 33891918
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  33892031 caatgttccgcaaatcgagtgttaactctccgagattaccaagtttacgtttttaggtacaaaaatcgtgttaactctaaggtaaaatcggtttctggta 33891932  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  33891931 aaattggaaggttt 33891918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 37328315 - 37328428
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||||||||||||||||| |||||||||| |||  |||||||||||||||||||| ||||||||||||||||  ||||||||||  |||||||||    
T  37328315 caatgttccgcaaatcgagtgttgactctccgagattatcgagtttacgtttttaggtacaaaaatcgtgttaactctaaggtaaactcgatttctggta 37328414  T
Q  159 aaatcgaaaggttt 172  Q
    |||||| |||||||    
T  37328415 aaatcggaaggttt 37328428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 23101699 - 23101812
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||||||||||||||||||| |||||||| |||  |||||||| ||||||||||| ||||||||||||||||  ||||||| |||||||||||||    
T  23101699 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctaaggtaaaatcagtttctggta 23101798  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  23101799 aaattggaaggttt 23101812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 29614592 - 29614479
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||||||||||||||||||| |||||||| |||  |||||||| ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  29614592 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 29614493  T
Q  159 aaatcgaaaggttt 172  Q
    |||| |||||||||    
T  29614492 aaattgaaaggttt 29614479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 59 - 160
Target Start/End: Original strand, 33383082 - 33383183
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||  || ||||||| ||||||| ||    
T  33383082 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtaccaaaatcgtggtaactctgagataaactcggtttctgata 33383181  T
Q  159 aa 160  Q
    ||    
T  33383182 aa 33383183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 44256552 - 44256439
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||| ||||||||||||||||||||||||||| |||  |||||||||||||||| ||| ||||||||||||||||  ||||||||||  |||||||||    
T  44256552 caatgtcccgcaaatcgagtgttaactctccgagattatcgagtttacgtttttagatacaaaaatcgtgttaactctgaggtaaactcgatttctggta 44256453  T
Q  159 aaatcgaaaggttt 172  Q
    |||||| |||||||    
T  44256452 aaatcggaaggttt 44256439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 59 - 165
Target Start/End: Original strand, 43172115 - 43172221
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||||||||| ||| |||| |||||||| |||||||||| ||||||| |||||||||  ||||||||||  |||||||||    
T  43172115 caatgttccgcaaatcgagtgttaactctctgagtttaccgagtttacatttttaggtatcaaaatcatgttaactcggaggtaaactcgatttctggta 43172214  T
Q  159 aaatcga 165  Q
    |||||||    
T  43172215 aaatcga 43172221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 510054 - 510167
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||||||||||||||||||| |||||||| |||  |||||||| ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  510054 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 510153  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  510154 aaattggaaggttt 510167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 7993565 - 7993678
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||||||||||||| |||| |||| ||  |||||| |||| |||||||||||||||   |||||||||| ||||||||||    
T  7993565 caatgttccgcaaatcgagtgttaactctccgagattaccgagtatatatttttaagtacaaaaatcgtgttaactatgaggtaaactcggtttctggta 7993664  T
Q  159 aaatcgaaaggttt 172  Q
    |||||| |||||||    
T  7993665 aaatcggaaggttt 7993678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 28034645 - 28034532
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||||||||| ||| |||| ||||||||||||||| |||| ||||||||||||||||  | ||||| || ||||||||||    
T  28034645 caatgttccgcaaatcgagtgttaactctctgagattaccgagtttacgtttttatgtacaaaaatcgtgttaactctgatgtaaaatcggtttctggta 28034546  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  28034545 aaattggaaggttt 28034532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 28342719 - 28342832
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||||||||||||||||||| |||||||| |||  |||||||| ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  28342719 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 28342818  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  28342819 aaattggaaggttt 28342832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 29585922 - 29586035
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||| || |||||||||||||| ||| |||| |||||||||||||||||||| ||||||||||||||||  ||||||| || ||||| ||||    
T  29585922 caatgttccgcagattgagtgttaactctctgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaagtcggtttcgggta 29586021  T
Q  159 aaatcgaaaggttt 172  Q
    |||||| |||||||    
T  29586022 aaatcggaaggttt 29586035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 63 - 172
Target Start/End: Complemental strand, 40460507 - 40460398
Alignment:
Q  63 gttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaat 162  Q
    ||||||||||||||||||||||||| |||| |||| ||||||||| |||||||||| ||||||||||||||||  ||||||| || ||||||||||||||    
T  40460507 gttccgcaaatcgagtgttaactcttcgagattaccgagtttacgcttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaat 40460408  T
Q  163 cgaaaggttt 172  Q
     | |||||||    
T  40460407 tggaaggttt 40460398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 59 - 158
Target Start/End: Original strand, 39028495 - 39028594
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||| |||| |||||  ||||||| || ||||||||||    
T  39028495 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaattgtgtaaactctgaggtaaaatcggtttctggta 39028594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 59 - 169
Target Start/End: Complemental strand, 44121730 - 44121620
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||| ||||||||||||||||||||||||| ||| |||| || ||||||||||||||||| |||||||||||||||   ||||||| || ||||||||||    
T  44121730 caatattccgcaaatcgagtgttaactctctgagattaccgaatttacgtttttaggtacaaaaatcgtgttaactatgaggtaaattcggtttctggta 44121631  T
Q  159 aaatcgaaagg 169  Q
    |||||| ||||    
T  44121630 aaatcggaagg 44121620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 56 - 175
Target Start/End: Original strand, 16709393 - 16709510
Alignment:
Q  56 aagcaatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctg 155  Q
    ||||||||||||||||||| |||||||||  |  ||| |||| |||||||||||||||||||||||||||||| ||||||  ||||||||||||||  ||    
T  16709393 aagcaatgttccgcaaatcaagtgttaacattatgagtttaccgagtttacgtttttaggtaccaaaatcgtggtaactctgaggtaaactcagtt--tg 16709490  T
Q  156 gtaaaatcgaaaggtttgac 175  Q
    ||||| ||| ||||||||||    
T  16709491 gtaaactcggaaggtttgac 16709510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 56 - 175
Target Start/End: Original strand, 17683629 - 17683746
Alignment:
Q  56 aagcaatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctg 155  Q
    ||||||||||||||||||| |||||||||  |  ||| |||| |||||||||||||||||||||||||||||| ||||||  ||||||||||||||  ||    
T  17683629 aagcaatgttccgcaaatcaagtgttaacattatgagtttaccgagtttacgtttttaggtaccaaaatcgtggtaactctgaggtaaactcagtt--tg 17683726  T
Q  156 gtaaaatcgaaaggtttgac 175  Q
    ||||| ||| ||||||||||    
T  17683727 gtaaactcggaaggtttgac 17683746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 60 - 175
Target Start/End: Original strand, 42610579 - 42610694
Alignment:
Q  60 aatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaa 159  Q
    |||||||||||||| |||||||||||||| ||| |||| || ||||||| ||||||||||||||||||||||| |   |||||||||  |||||||||||    
T  42610579 aatgttccgcaaattgagtgttaactctctgagtttaccgaatttacgtgtttaggtaccaaaatcgtgttaaatttgaggtaaacttggtttctggtaa 42610678  T
Q  160 aatcgaaaggtttgac 175  Q
    ||||  ||||||||||    
T  42610679 aatcagaaggtttgac 42610694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 39784515 - 39784628
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||| |||||||||||||| ||| |||| |||  |||||||| ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  39784515 caatgttccgtaaatcgagtgttaaatcttcgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 39784614  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  39784615 aaattggaaggttt 39784628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 94 - 175
Target Start/End: Complemental strand, 48136990 - 48136909
Alignment:
Q  94 ttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 175  Q
    |||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||   ||||||||||    
T  48136990 ttaccgagtttacgtttttaggtaccaaaatcgtgttaactctgaggtaaactcagtttctggtaaaattagaaggtttgac 48136909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 3023342 - 3023455
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||| |||||||||||||||||||||||||||| |||  ||||||| |||||||||||| |||||| ||||||||   ||||||| || ||||||| ||    
T  3023342 caatgatccgcaaatcgagtgttaactctccgagattatcgagtttatgtttttaggtacaaaaatcatgttaactttgaggtaaaatcggtttctgata 3023441  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  3023442 aaattggaaggttt 3023455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 26201929 - 26201813
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||| |||||||||||||||||  ||||| |||| || ||||| |||||||||||||||||||||| |||||  ||||||||||| ||  || ||    
T  26201929 caatgttccacaaatcgagtgttaacttgccgagtttaccgaatttacatttttaggtaccaaaatcgtgtaaactcggaggtaaactcaattattgcta 26201830  T
Q  159 aaatcgaaaggtttgac 175  Q
    |||||| || |||||||    
T  26201829 aaatcggaatgtttgac 26201813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 57 - 164
Target Start/End: Complemental strand, 4640015 - 4639908
Alignment:
Q  57 agcaatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctgg 156  Q
    ||||||||||| ||||||| |||| |||||  |||| |||| |||||||||| ||||||| | |||| |||||||||||  ||||||||||  |||||||    
T  4640015 agcaatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactctatttctgg 4639916  T
Q  157 taaaatcg 164  Q
    ||||||||    
T  4639915 taaaatcg 4639908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 57 - 163
Target Start/End: Original strand, 27148804 - 27148910
Alignment:
Q  57 agcaatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctgg 156  Q
    ||||||||||| |||||||||||||||||| |  || |||  ||||||||||||||||||| |||||||||||||| ||  |||||| |||| |||| |     
T  27148804 agcaatgttccacaaatcgagtgttaactcgcaaagtttatcgagtttacgtttttaggtatcaaaatcgtgttaaatcggaggtaacctcaatttcagc 27148903  T
Q  157 taaaatc 163  Q
    |||||||    
T  27148904 taaaatc 27148910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 96 - 173
Target Start/End: Complemental strand, 11735292 - 11735215
Alignment:
Q  96 actgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttg 173  Q
    |||||||||||| |||||||| ||||||||||||||||||  ||||||||||  ||||||||||||||| || |||||    
T  11735292 actgagtttacgattttaggtcccaaaatcgtgttaactcggaggtaaactcgatttctggtaaaatcggaatgtttg 11735215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 99 - 208
Target Start/End: Complemental strand, 37915995 - 37915886
Alignment:
Q  99 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgaccgagttaaaactcgataaattcg 198  Q
    |||||||||| ||||||| | |||| ||| |||||||| ||||||||||  ||| |||||||||||||  ||||||||||||||| ||||  |||| |||    
T  37915995 gagtttacgtgtttaggtgctaaaagcgttttaactcagaggtaaactcgatttatggtaaaatcgaacagtttgaccgagttaacactcagtaaactcg 37915896  T
Q  199 tgtaaaattg 208  Q
    ||| ||||||    
T  37915895 tgtgaaattg 37915886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 14741387 - 14741503
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||| ||||||| |||| |||||  |||| |||| |||||||||| ||||||| | |||| |||||||||||  ||||||||||  ||||| |||    
T  14741387 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 14741486  T
Q  159 aaatcgaaaggtttgac 175  Q
    |||||| || |||||||    
T  14741487 aaatcggaaagtttgac 14741503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 21486222 - 21486287
Alignment:
Q  169 gtttgaccgagttaaaactcgataaattcgtgtaaaattgaccgaattttacgagtttacatctaa 234  Q
    |||||| |||||||| ||||| |||| ||||||||| | ||||||| |||||||||||||||||||    
T  21486222 gtttgatcgagttaacactcggtaaactcgtgtaaactcgaccgaaatttacgagtttacatctaa 21486287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 21024067 - 21024143
Alignment:
Q  99 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 175  Q
    ||||||||| ||||||||  ||||| |||||||||||  |||||||||| |||| |||| |||||| || |||||||    
T  21024067 gagtttacgattttaggtgacaaaaacgtgttaactcgaaggtaaactcggtttttggtgaaatcggaaagtttgac 21024143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 100 - 175
Target Start/End: Complemental strand, 14732393 - 14732318
Alignment:
Q  100 agtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 175  Q
    |||||||||||||||||  ||||| |||||||||||  |||||||||  |||| |||| |||||| || |||||||    
T  14732393 agtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaacttggtttttggtgaaatcggaaagtttgac 14732318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 171
Target Start/End: Original strand, 30823108 - 30823158
Alignment:
Q  121 aaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtt 171  Q
    |||||||||||||||  |||||||||| |||||| ||||||||| ||||||    
T  30823108 aaatcgtgttaactctgaggtaaactcggtttctagtaaaatcggaaggtt 30823158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 60 - 127
Target Start/End: Complemental strand, 5772171 - 5772106
Alignment:
Q  60 aatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgt 127  Q
    |||||| || |||||||||||  ||||  |||| ||||||||||||| |||||| |||||||||||||    
T  5772171 aatgtttcgtaaatcgagtgt--actcgtcgagtttactgagtttacatttttatgtaccaaaatcgt 5772106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 33497192 - 33497116
Alignment:
Q  99 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 175  Q
    |||||||| |||||| ||| ||||||||||| |||||  ||||||||||  |||||| |||||| | || |||||||    
T  33497192 gagtttacatttttaagtatcaaaatcgtgtcaactcggaggtaaactcgatttctgataaaattggaatgtttgac 33497116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 47067167 - 47067195
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactct 87  Q
    |||||||||||||||||||||||||||||    
T  47067167 caatgttccgcaaatcgagtgttaactct 47067195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 3e-42; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 12522646 - 12522531
Alignment:
Q  60 aatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaa 159  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  12522646 aatgttccgcaaatcgagtgttaactctccgagtttactaagtttgcatttttaggtaccaaaatcgtgttaactcagaggtaaactcggtttctggtaa 12522547  T
Q  160 aatcgaaaggtttgac 175  Q
    ||||| ||||||||||    
T  12522546 aatcggaaggtttgac 12522531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 10295130 - 10295017
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||| | ||||||||||||||  |||||||||| ||||||||||    
T  10295130 caatgttccgtaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaacaatcgtgttaactctgaggtaaactcggtttctggta 10295031  T
Q  159 aaatcgaaaggttt 172  Q
    |||||| |||||||    
T  10295030 aaatcggaaggttt 10295017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 31625718 - 31625831
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||| ||||| ||||||||||  |||||||||| ||||||||||    
T  31625718 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaattgtgttaactctgaggtaaactcggtttctggta 31625817  T
Q  159 aaatcgaaaggttt 172  Q
    |||||| |||||||    
T  31625818 aaatcggaaggttt 31625831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 9288285 - 9288172
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  9288285 caatgttccgcaaatcgagtgttaactcttcgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 9288186  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  9288185 aaattggaaggttt 9288172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 19717665 - 19717552
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  19717665 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 19717566  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  19717565 aaattggaaggttt 19717552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 43166467 - 43166351
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||||||||||||||||||| | | |||| |||| |||||||||||||||||||| ||||||||||||||||  ||||||| | |||||||||||    
T  43166467 caatgttccgcaaatcgagtgttaatttttcgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaataagtttctggta 43166368  T
Q  159 aaatcgaaaggtttgac 175  Q
    |||| ||||||||||||    
T  43166367 aaattgaaaggtttgac 43166351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 8029982 - 8029864
Alignment:
Q  57 agcaatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctgg 156  Q
    |||||||||||| |||||||||||||||||| |||| |||  |||||||||| ||||||||||||||||||||||||||  || |||||||  |||||||    
T  8029982 agcaatgttccgtaaatcgagtgttaactcttcgagtttatcgagtttacgtgtttaggtaccaaaatcgtgttaactctgagataaactcgatttctgg 8029883  T
Q  157 taaaatcgaaaggtttgac 175  Q
    |||||||| ||||||||||    
T  8029882 taaaatcggaaggtttgac 8029864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 18305767 - 18305654
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||| |||||||||||||||||||||||||| |||| ||| |||||||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  18305767 caatgttacgcaaatcgagtgttaactctccgagattaccgagcttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 18305668  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  18305667 aaattggaaggttt 18305654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 18958518 - 18958405
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||| ||||||||||||||||  ||||||| |  ||||||||||    
T  18958518 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaattggtttctggta 18958419  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  18958418 aaattggaaggttt 18958405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 67 - 172
Target Start/End: Original strand, 32497959 - 32498064
Alignment:
Q  67 cgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaa 166  Q
    ||||||| |||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||  |||||||||| |||||| ||||||||| |    
T  32497959 cgcaaattgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctagtaaaatcgga 32498058  T
Q  167 aggttt 172  Q
    ||||||    
T  32498059 aggttt 32498064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 58 - 237
Target Start/End: Complemental strand, 6388266 - 6388074
Alignment:
Q  58 gcaatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggt 157  Q
    |||||||||||||||| ||||| |||||| ||||| |||  || |||| |||||||||||||||||||||||||||||  |||||||||| |||| ||||    
T  6388266 gcaatgttccgcaaattgagtggtaactcgccgagtttatcgaatttatgtttttaggtaccaaaatcgtgttaactcggaggtaaactctgtttatggt 6388167  T
Q  158 aaaatc-gaaag--------gtttgaccgagtta----aaactcgataaattcgtgtaaaattgaccgaattttacgagtttacatctaaaaa 237  Q
    |||||| |||||        |||||||| |||||    | |||||||||| ||||||||| |||||||| ||||||||||||| |||||||||    
T  6388166 aaaatcggaaagtttgacaagtttgaccaagttaacgtacactcgataaactcgtgtaaacttgaccgagttttacgagtttaaatctaaaaa 6388074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 26856515 - 26856628
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||| | |||||||||||||||||||||||| |||| ||||||| |||| ||||||| ||||||||||||||||  |||||||||| ||||||||||    
T  26856515 caatgttacacaaatcgagtgttaactctccgagattaccgagtttatgtttataggtacaaaaatcgtgttaactctgaggtaaactcggtttctggta 26856614  T
Q  159 aaatcgaaaggttt 172  Q
    |||||  |||||||    
T  26856615 aaatcagaaggttt 26856628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 42305395 - 42305282
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||| |||||||||||||||||||||||| |||| |||||||| ||||||||||  ||||||||||||||||  ||||||| || ||||||||||    
T  42305395 caatgttccacaaatcgagtgttaactctccgagattaccgagtttacctttttaggtataaaaatcgtgttaactctgaggtaaaatcggtttctggta 42305296  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  42305295 aaattggaaggttt 42305282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 16364116 - 16364229
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||||||||  ||| |||  || ||||||||||||||||| ||||||||||||||||  ||||||| || |||||| |||    
T  16364116 caatgttccgcaaatcgagtgttaactctatgagattatcgaatttacgtttttaggtacaaaaatcgtgttaactctaaggtaaattcggtttctagta 16364215  T
Q  159 aaatcgaaaggttt 172  Q
    |||||| |||||||    
T  16364216 aaatcggaaggttt 16364229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 59 - 204
Target Start/End: Original strand, 24082173 - 24082318
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||  ||||| ||||||||||||  |||| ||||| |||||| | |||||||||||||||| |||||||  |  ||||||| || ||||||||||    
T  24082173 caatgttctacaaattgagtgttaactcgacgagtttactaagtttatgattttaggtaccaaaattgtgttaatactgaggtaaattcggtttctggta 24082272  T
Q  159 aaatcgaaaggtttgaccgagttaaaactcgataaattcgtgtaaa 204  Q
    |||||||||||||||||| |||||| ||||| |||| |||| ||||    
T  24082273 aaatcgaaaggtttgaccaagttaacactcggtaaactcgtataaa 24082318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 39467309 - 39467196
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||| |||||||| |||||||  ||||||| |   |||||||||    
T  39467309 caatgttccgcaaatcgagtgttaactctccgagattaccgcgtttacgtttttaggtacaaaaatcgtattaactctaaggtaaaattgatttctggta 39467210  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  39467209 aaattggaaggttt 39467196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 62 - 172
Target Start/End: Complemental strand, 43308296 - 43308186
Alignment:
Q  62 tgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaa 161  Q
    |||||||||||||||||||||||||| |||| |||  |||||| ||||||||||||||||||||||||||||||  |  |||| || |||||||||||||    
T  43308296 tgttccgcaaatcgagtgttaactcttcgagattatcgagtttgcgtttttaggtaccaaaatcgtgttaactctgatataaaatcggtttctggtaaaa 43308197  T
Q  162 tcgaaaggttt 172  Q
    | | |||||||    
T  43308196 ttggaaggttt 43308186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 14781923 - 14781810
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||||||||||||||||||| |||||||| |||  ||||| || ||||||||||  ||||||||||||||||  ||||||| || ||||||||||    
T  14781923 caatgttccgcaaatcgagtgttaaatctccgagattatcgagttgacatttttaggtataaaaatcgtgttaactctgaggtaaaatcggtttctggta 14781824  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  14781823 aaattggaaggttt 14781810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 44725582 - 44725469
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||||||||||||||||||| |||| ||| |||  ||| |||| ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  44725582 caatgttccgcaaatcgagtgttaaatctcagagattatcgagattacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 44725483  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  44725482 aaattggaaggttt 44725469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 100 - 175
Target Start/End: Original strand, 41393958 - 41394033
Alignment:
Q  100 agtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 175  Q
    |||||||||||||||||| |||||||||||||| ||  |||||||||||||||||| |||||||||||||||||||    
T  41393958 agtttacgtttttaggtatcaaaatcgtgttaattcggaggtaaactcagtttctgataaaatcgaaaggtttgac 41394033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 24067107 - 24067172
Alignment:
Q  99 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcg 164  Q
    ||||||||||||||||||||||||||||||| |||||  |||| |||||| |||||||||||||||    
T  24067107 gagtttacgtttttaggtaccaaaatcgtgtcaactcggaggtgaactcaatttctggtaaaatcg 24067172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 19484176 - 19484292
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||| ||||||| |||| |||||  |||| |||| ||||||| || ||||||| | |||| |||||||||||  ||||||||||  |||||||||    
T  19484176 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttatgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 19484275  T
Q  159 aaatcgaaaggtttgac 175  Q
    |||||| || |||||||    
T  19484276 aaatcggaaagtttgac 19484292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 60 - 175
Target Start/End: Original strand, 17234676 - 17234791
Alignment:
Q  60 aatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaa 159  Q
    |||||||  |||||||| ||||||||| | ||| ||||  ||||| |||||||||||||||||||| | | |||||  ||||||||||  ||||||||||    
T  17234676 aatgttcaacaaatcgaatgttaactcgctgagtttaccaagtttgcgtttttaggtaccaaaatcctatcaactcggaggtaaactcgatttctggtaa 17234775  T
Q  160 aatcgaaaggtttgac 175  Q
    ||||| || |||||||    
T  17234776 aatcggaatgtttgac 17234791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 233
Target Start/End: Complemental strand, 27878729 - 27878591
Alignment:
Q  104 tacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac---------cgagttaaaactcgataaa 194  Q
    ||||| ||||||||||||||||||||||||||  | ||||| || ||||||||||||||||  |||||||||          ||||||| ||||||| ||    
T  27878729 tacgtgtttaggtaccaaaatcgtgttaactcggatgtaaattcggtttctggtaaaatcggtaggtttgacgagtttgatagagttaacactcgatgaa 27878630  T
Q  195 ttcgtgtaaaattgaccgaattttacgagtttacatcta 233  Q
     ||||||||| | |||||| |||||| ||||||||||||    
T  27878629 ctcgtgtaaactcgaccgagttttacaagtttacatcta 27878591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 233
Target Start/End: Complemental strand, 28018910 - 28018772
Alignment:
Q  104 tacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac---------cgagttaaaactcgataaa 194  Q
    ||||| ||||||||||||||||||||||||||  | ||||| || ||||||||||||||||  |||||||||          ||||||| ||||||| ||    
T  28018910 tacgtgtttaggtaccaaaatcgtgttaactcggatgtaaattcggtttctggtaaaatcggtaggtttgacgagtttgatagagttaacactcgatgaa 28018811  T
Q  195 ttcgtgtaaaattgaccgaattttacgagtttacatcta 233  Q
     ||||||||| | |||||| |||||| ||||||||||||    
T  28018810 ctcgtgtaaactcgaccgagttttacaagtttacatcta 28018772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 60 - 144
Target Start/End: Original strand, 7760770 - 7760854
Alignment:
Q  60 aatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaa 144  Q
    |||||||| |||||||||||||||||   |||| ||||||||||||  |||||||||| ||||||||||| |||||  |||||||    
T  7760770 aatgttccacaaatcgagtgttaacttatcgagtttactgagtttatatttttaggtatcaaaatcgtgtcaactcgaaggtaaa 7760854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 87 - 162
Target Start/End: Original strand, 7466759 - 7466834
Alignment:
Q  87 tccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaat 162  Q
    |||||| |||| ||||||| ||||||| |||| ||||||||||||||||  ||||||| |||||||||| ||||||    
T  7466759 tccgagattaccgagtttatgtttttaagtacaaaaatcgtgttaactctgaggtaaaatcagtttctgataaaat 7466834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 12522531 - 12522485
Alignment:
Q  89 cgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactc 135  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||    
T  12522531 cgagcttaccaagtttacgtttttaggtaccaaaatcgtgttaactc 12522485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 102 - 233
Target Start/End: Complemental strand, 27915675 - 27915535
Alignment:
Q  102 tttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaag---------gtttgaccgagttaaaactcgata 192  Q
    ||||||| |||| |||||||||||||||||||||| |  |||| ||  |||||| ||||||||  ||         ||||||||||||||| |||||||     
T  27915675 tttacgtgtttatgtaccaaaatcgtgttaactcagatttaaattcgatttctgataaaatcggtaggtttgacgagtttgaccgagttaacactcgatg 27915576  T
Q  193 aattcgtgtaaaattgaccgaattttacgagtttacatcta 233  Q
    || ||||||||| | |||||| |||||| ||||||||||||    
T  27915575 aactcgtgtaaactcgaccgagttttacaagtttacatcta 27915535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 102 - 233
Target Start/End: Complemental strand, 27962094 - 27961954
Alignment:
Q  102 tttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaag---------gtttgaccgagttaaaactcgata 192  Q
    ||||||| |||| |||||||||||||||||||||| |  |||| ||  |||||| ||||||||  ||         ||||||||||||||| |||||||     
T  27962094 tttacgtgtttatgtaccaaaatcgtgttaactcagatttaaattcgatttctgataaaatcggtaggtttgacgagtttgaccgagttaacactcgatg 27961995  T
Q  193 aattcgtgtaaaattgaccgaattttacgagtttacatcta 233  Q
    || ||||||||| | |||||| |||||| ||||||||||||    
T  27961994 aactcgtgtaaactcgaccgagttttacaagtttacatcta 27961954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 37131386 - 37131322
Alignment:
Q  99 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatc 163  Q
    |||||||| |||||||||||||||||||||| |||||  ||||||||||   |||||||||||||    
T  37131386 gagtttacatttttaggtaccaaaatcgtgtcaactcggaggtaaactcgacttctggtaaaatc 37131322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 26620445 - 26620369
Alignment:
Q  99 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 175  Q
    |||||||  ||||||| || | ||||||||||||||    |||||| |||||||||| ||||||||||| |||||||    
T  26620445 gagtttatatttttagatatcgaaatcgtgttaacttggtggtaaattcagtttctgataaaatcgaaaagtttgac 26620369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 8e-40; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 59 - 174
Target Start/End: Complemental strand, 5494887 - 5494772
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||    
T  5494887 caatgttccgcaaattgagtgttaactctccgagattaccgagtttacgtttttaggtaccaaaatcgtgttaactctgaggtaaactcggtttctggta 5494788  T
Q  159 aaatcgaaaggtttga 174  Q
    |||||  |||||||||    
T  5494787 aaatcagaaggtttga 5494772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 45272976 - 45273092
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||| ||||| ||||||||||  |||||||||| ||||||||||    
T  45272976 caatgttccgcaaatcgagtgttaactctccgagattatcgagtttacgtttttaggtacaaaaattgtgttaactctgaggtaaactcggtttctggta 45273075  T
Q  159 aaatcgaaaggtttgac 175  Q
    |||||| ||||||||||    
T  45273076 aaatcggaaggtttgac 45273092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 46328395 - 46328508
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||| ||||||||||||||||  |||||||||| ||||||| ||    
T  46328395 caatgttccgcaaatcgagtgttaattctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctgtta 46328494  T
Q  159 aaatcgaaaggttt 172  Q
    |||||| |||||||    
T  46328495 aaatcggaaggttt 46328508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 59 - 203
Target Start/End: Complemental strand, 9322297 - 9322153
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||| |||||||||||||| |||||||| |||  |||||||| ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  9322297 caatgttccgtaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 9322198  T
Q  159 aaatcgaaaggtttgaccgagttaaaactcgataaattcgtgtaa 203  Q
    |||| | |||||||||| ||||||| ||||| |||| ||||||||    
T  9322197 aaattggaaggtttgactgagttaacactcggtaaactcgtgtaa 9322153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 58 - 233
Target Start/End: Complemental strand, 47371715 - 47371531
Alignment:
Q  58 gcaatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggt 157  Q
    |||||||| |||||||||||||||||| ||| ||| |||  ||||||||||  |||||||||||||||||||||||||  ||||||||||  ||||||||    
T  47371715 gcaatgtttcgcaaatcgagtgttaacactctgagtttatcgagtttacgtacttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggt 47371616  T
Q  158 aaaatcgaaag---------gtttgaccgagttaaaactcgataaattcgtgtaaaattgaccgaattttacgagtttacatcta 233  Q
    ||||||| |||         ||||||||||||||| ||||| |||| ||||||||| | |||||| |||||||||||||||||||    
T  47371615 aaaatcggaaggtttgccgagtttgaccgagttaacactcggtaaactcgtgtaaactcgaccgagttttacgagtttacatcta 47371531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 3583694 - 3583579
Alignment:
Q  60 aatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaa 159  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||| | | |||||||| |||||| ||||    
T  3583694 aatgttccgcaaatcgagtgttaactctccgagtttaccgagtttacgtttttaggtaccgaaatcgtgttaacttagaagtaaactcggtttctagtaa 3583595  T
Q  160 aatcgaaaggtttgac 175  Q
    ||||| || |||||||    
T  3583594 aatcggaaagtttgac 3583579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 59 - 162
Target Start/End: Complemental strand, 8141022 - 8140919
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||| ||||||||||||||||  ||||||| ||  |||||||||    
T  8141022 caatgttccgcaaatcgagtgttaactctccgagattatcgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcgatttctggta 8140923  T
Q  159 aaat 162  Q
    ||||    
T  8140922 aaat 8140919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 28404084 - 28403969
Alignment:
Q  60 aatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaa 159  Q
    |||||||||||||||||||||||||||| |||  ||||||||||||| |||||||||||||||||||||||||||   ||||||| || ||||||  |||    
T  28404084 aatgttccgcaaatcgagtgttaactcttcgaatttactgagtttacatttttaggtaccaaaatcgtgttaacttgaaggtaaattcggtttctaataa 28403985  T
Q  160 aatcgaaaggtttgac 175  Q
    |||||||| |||||||    
T  28403984 aatcgaaatgtttgac 28403969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 6312985 - 6313098
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||||||||||||||||||| |||||||| |||  |||||||| ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  6312985 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 6313084  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  6313085 aaattggaaggttt 6313098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 15834823 - 15834710
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||| ||||||||||||||||  ||||||| ||  ||| |||||    
T  15834823 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaattcgatttttggta 15834724  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  15834723 aaattggaaggttt 15834710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 25612501 - 25612614
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||||||||||||||||||| |||||||| |||  |||||||| ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  25612501 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 25612600  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  25612601 aaattggaaggttt 25612614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 29396223 - 29396110
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||||||||||||||||||| |||||||| |||  |||||||| ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  29396223 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 29396124  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  29396123 aaattggaaggttt 29396110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 48966630 - 48966514
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||||||||||||| ||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||  |||||||||   |||||| |     
T  48966630 caatgttccgcaaatcgagggttaactcttcgagtttactgagtttacgtgtttaggtaccaaaatcgtgttaactctgaggtaaacttgatttctgatg 48966531  T
Q  159 aaatcgaaaggtttgac 175  Q
    |||| | ||||||||||    
T  48966530 aaattggaaggtttgac 48966514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 59 - 164
Target Start/End: Complemental strand, 38535935 - 38535830
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||| |||||||||| || |||| |||||||||||||||| ||| ||||| ||||||||||  |||||||||  ||||||||||    
T  38535935 caatgttccgcaaatcgagttttaactctccaagattaccgagtttacgtttttagttacaaaaattgtgttaactctgaggtaaactgggtttctggta 38535836  T
Q  159 aaatcg 164  Q
    ||||||    
T  38535835 aaatcg 38535830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 59 - 164
Target Start/End: Complemental strand, 38558153 - 38558048
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||| |||||||||| || |||| |||||||||||||||| ||| ||||| ||||||||||  |||||||||  ||||||||||    
T  38558153 caatgttccgcaaatcgagttttaactctccaagattaccgagtttacgtttttagttacaaaaattgtgttaactctgaggtaaactgggtttctggta 38558054  T
Q  159 aaatcg 164  Q
    ||||||    
T  38558053 aaatcg 38558048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 51702004 - 51702117
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||||||||||||||||||| |||||||| |||  |||||||| ||||||||||| ||||| ||||||||||  ||||||| || ||||||||||    
T  51702004 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaattgtgttaactctgaggtaaaatcggtttctggta 51702103  T
Q  159 aaatcgaaaggttt 172  Q
    ||||  ||||||||    
T  51702104 aaattaaaaggttt 51702117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 59 - 135
Target Start/End: Complemental strand, 25831038 - 25830962
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactc 135  Q
    ||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||    
T  25831038 caatgttccacaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactc 25830962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 60 - 167
Target Start/End: Complemental strand, 49971734 - 49971627
Alignment:
Q  60 aatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaa 159  Q
    |||||||| |||||||| ||||||||  | ||| |||| ||||||||||||||||||||||||||||||| |||||  ||||||||||  ||||||||||    
T  49971734 aatgttccacaaatcgaatgttaacttactgagtttaccgagtttacgtttttaggtaccaaaatcgtgtcaactcggaggtaaactcgttttctggtaa 49971635  T
Q  160 aatcgaaa 167  Q
    ||||||||    
T  49971634 aatcgaaa 49971627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 48177232 - 48177118
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcag-tttctggt 157  Q
    ||||||| |||||||||||| ||||||||| ||| ||||||||||||||||||||||||  ||||||||||||||||  ||||||| || | ||||||||    
T  48177232 caatgtttcgcaaatcgagtattaactctctgagattactgagtttacgtttttaggtagaaaaatcgtgttaactctgaggtaaaatcggttttctggt 48177133  T
Q  158 aaaatcgaaaggttt 172  Q
    ||||| | |||||||    
T  48177132 aaaattggaaggttt 48177118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 49453200 - 49453083
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtacc-aaaatcgtgttaactcataggtaaactcagtttctggt 157  Q
    ||||||||||||||||||||||||||| |||||| ||||  |||||| || |||||||||| ||||||||||||||||  ||||||||||  |||||||     
T  49453200 caatgttccgcaaatcgagtgttaactgtccgagtttacctagtttatgtgtttaggtaccaaaaatcgtgttaactctgaggtaaactcgatttctgga 49453101  T
Q  158 aaaatcgaaaggtttgac 175  Q
    ||||||  ||||||||||    
T  49453100 aaaatcataaggtttgac 49453083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 56 - 175
Target Start/End: Complemental strand, 49237108 - 49236989
Alignment:
Q  56 aagcaatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctg 155  Q
    ||||||||||||| ||||||||||||||  || |||| |||  ||||||| || |||||||||||||| |||||||| ||  || ||| ||| |||||||    
T  49237108 aagcaatgttccgtaaatcgagtgttaatacttcgagtttatcgagtttatgtgtttaggtaccaaaaccgtgttaattcggagttaagctcggtttctg 49237009  T
Q  156 gtaaaatcgaaaggtttgac 175  Q
    ||||||||||||||||||||    
T  49237008 gtaaaatcgaaaggtttgac 49236989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 58 - 164
Target Start/End: Complemental strand, 32760230 - 32760133
Alignment:
Q  58 gcaatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggt 157  Q
    ||||||||||||||||||||||||||| |||         ||||||||||||||||||||||||||||||||||||||  |||||||||| |||||| ||    
T  32760230 gcaatgttccgcaaatcgagtgttaacactc---------tgagtttacgtttttaggtaccaaaatcgtgttaactctgaggtaaactcggtttctagt 32760140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 56 - 175
Target Start/End: Original strand, 52182305 - 52182424
Alignment:
Q  56 aagcaatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctg 155  Q
    ||||| |||| | |||||||||||||||||| ||||| |||  ||||||||||||||||||||  ||||||||| || ||  ||||||| ||  ||||||    
T  52182305 aagcactgtttcacaaatcgagtgttaactcgccgagtttatcgagtttacgtttttaggtactgaaatcgtgtcaattcggaggtaaattcgatttctg 52182404  T
Q  156 gtaaaatcgaaaggtttgac 175  Q
    |||||||||||| |||||||    
T  52182405 gtaaaatcgaaatgtttgac 52182424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 18798866 - 18798974
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||| |||||| |||||||||||     ||| |||||||| ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  18798866 caatgttccgcagatcgagcgttaactctcc-----taccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 18798960  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  18798961 aaattggaaggttt 18798974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 70 - 175
Target Start/End: Original strand, 25253486 - 25253591
Alignment:
Q  70 aaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaagg 169  Q
    |||||||||||||| |||| ||| |||| ||||||| ||||||||||||||||||||||||||  |  ||||||| || |||||||||||| ||| |||     
T  25253486 aaatcgagtgttaattctctgagtttaccgagtttatgtttttaggtaccaaaatcgtgttaatactgaggtaaattcggtttctggtaaactcggaaga 25253585  T
Q  170 tttgac 175  Q
    ||||||    
T  25253586 tttgac 25253591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 35177350 - 35177233
Alignment:
Q  59 caatgttccgcaaatcgagtgtt-aactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggt 157  Q
    ||||| ||||||||||||||||| ||| ||||||| |||   | |||| |||||||||||||||||||||||||| ||| ||||||||||  |||||| |    
T  35177350 caatggtccgcaaatcgagtgtttaacactccgagtttatcaaatttatgtttttaggtaccaaaatcgtgttaattcagaggtaaactcgatttctgat 35177251  T
Q  158 aaaatcgaaaggtttgac 175  Q
    ||||||| |||| |||||    
T  35177250 aaaatcggaaggattgac 35177233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 4005049 - 4005165
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||| ||||||| |||| |||||  |||| |||| |||||||||| ||||||| | |||| |||||||||||  ||||||||||  |||||||||    
T  4005049 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 4005148  T
Q  159 aaatcgaaaggtttgac 175  Q
    |||||| || |||||||    
T  4005149 aaatcggaaagtttgac 4005165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 59 - 163
Target Start/End: Complemental strand, 5209507 - 5209403
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||||| ||| ||| |||  |  ||||||| ||||||||||||||||||||||||||  |||| |||||  ||||||||     
T  5209507 caatgttccgcaaatcgagtgttaacactctgagtttatcgtttttacgtgtttaggtaccaaaatcgtgttaactcggaggtcaactcgatttctggtg 5209408  T
Q  159 aaatc 163  Q
    |||||    
T  5209407 aaatc 5209403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 26757597 - 26757713
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||| ||||||| |||| |||||  |||| |||| |||||||||| ||||||| | |||| || ||||||||| ||||||||||  |||||||||    
T  26757597 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgagttaactcagaggtaaactcgatttctggta 26757696  T
Q  159 aaatcgaaaggtttgac 175  Q
    |||||| || |||||||    
T  26757697 aaatcggaaagtttgac 26757713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 70 - 175
Target Start/End: Complemental strand, 27257986 - 27257881
Alignment:
Q  70 aaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaagg 169  Q
    ||||| ||||||||||| ||||| ||| ||| |||||||||||||||||||||||||||| |||||  |||||||||   |||  |||||||||| || |    
T  27257986 aaatctagtgttaactcgccgagtttaatgaatttacgtttttaggtaccaaaatcgtgtcaactccgaggtaaacttgattttcggtaaaatcggaatg 27257887  T
Q  170 tttgac 175  Q
    ||||||    
T  27257886 tttgac 27257881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 99 - 172
Target Start/End: Original strand, 49231456 - 49231529
Alignment:
Q  99 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggttt 172  Q
    ||||||| |||||||||||| ||||||||||||||||  |||||||||| |||||||||| ||||| |||||||    
T  49231456 gagtttatgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctggtataatcggaaggttt 49231529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 1243445 - 1243329
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||| ||||||| |||| |||||  |||| ||||  ||||||||| ||||||| | |||| |||||||||||  ||||||||||  |||||||||    
T  1243445 caatgttccacaaatcgcgtgtcaactcggcgagtttacctagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 1243346  T
Q  159 aaatcgaaaggtttgac 175  Q
    |||||| || |||||||    
T  1243345 aaatcggaaagtttgac 1243329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 8147299 - 8147415
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||| ||||||| |||| |||||  |||| |||| |||||||||| ||||||| | |||| |||||||||||  ||||||||||  |||||||||    
T  8147299 caatgttccacaaatcgcgtgtcaactcagcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 8147398  T
Q  159 aaatcgaaaggtttgac 175  Q
    |||| | || |||||||    
T  8147399 aaattgcaaagtttgac 8147415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 59 - 163
Target Start/End: Original strand, 9192006 - 9192110
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||| ||||||| |||| |||||  |||| |||| |||||||||| ||||||| | |||| |||||||||||  ||||||||||  |||||||||    
T  9192006 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 9192105  T
Q  159 aaatc 163  Q
    |||||    
T  9192106 aaatc 9192110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 41353403 - 41353519
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||| ||||||| |||| |||||  |||| |||| ||||||| || ||||||| | |||| |||||||||||  ||||||||||  |||||||||    
T  41353403 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttatgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 41353502  T
Q  159 aaatcgaaaggtttgac 175  Q
    |||||| || |||||||    
T  41353503 aaatcggaaagtttgac 41353519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 51106874 - 51106990
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||| ||||||| |||| |||||  |||| |||| |||||||||| ||||||| | |||| |||||||||||  ||| ||||||  |||||||||    
T  51106874 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggaaaactcgatttctggta 51106973  T
Q  159 aaatcgaaaggtttgac 175  Q
    |||||| || |||||||    
T  51106974 aaatcggaaagtttgac 51106990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 59 - 124
Target Start/End: Complemental strand, 28387206 - 28387141
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaat 124  Q
    ||||||||||||||||| |||||||||||||||| |||| |||||||| |||||| |||| |||||    
T  28387206 caatgttccgcaaatcgtgtgttaactctccgagattaccgagtttacatttttatgtacaaaaat 28387141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 3593237 - 3593344
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||||||||||         |||||||  |||||||||| |||||||||||||||||  ||||||| ||  |||||  ||    
T  3593237 caatgttccgcaaatcgagtgttaactctcc---------gagtttatatttttaggtatcaaaatcgtgttaactcggaggtaaattcgatttctaata 3593327  T
Q  159 aaatcgaaaggtttgac 175  Q
    |||||| ||||||||||    
T  3593328 aaatcggaaggtttgac 3593344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 99 - 183
Target Start/End: Original strand, 18954487 - 18954571
Alignment:
Q  99 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgaccgagttaa 183  Q
    ||||||||||||||||||  ||||| |||||||||||  | |||||||| |||| |||| |||||| || |||||||||||||||    
T  18954487 gagtttacgtttttaggtggcaaaaacgtgttaactcggacgtaaactcggtttttggtgaaatcggaaagtttgaccgagttaa 18954571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 7798522 - 7798598
Alignment:
Q  99 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 175  Q
    ||||||||||||||||||  ||||| |||||||||||  |||||||||| |||| |||| |||||| || |||||||    
T  7798522 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgac 7798598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 175
Target Start/End: Original strand, 1108372 - 1108450
Alignment:
Q  97 ctgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 175  Q
    ||||||||||||||||||||   |||| ||||| |||||  |||||||||| |||| |||| |||||| || |||||||    
T  1108372 ctgagtttacgtttttaggtggtaaaaacgtgtaaactcggaggtaaactcggtttttggtgaaatcggaaagtttgac 1108450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 105 - 175
Target Start/End: Complemental strand, 33886953 - 33886883
Alignment:
Q  105 acgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 175  Q
    ||||||||||||  ||||| |||||||||||  |||||||||| |||| |||| |||||| || |||||||    
T  33886953 acgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgac 33886883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 105 - 175
Target Start/End: Original strand, 33957297 - 33957367
Alignment:
Q  105 acgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 175  Q
    ||||||||||||  ||||| |||||||||||  |||||||||| |||| |||| |||||| || |||||||    
T  33957297 acgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgac 33957367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 2293475 - 2293411
Alignment:
Q  99 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatc 163  Q
    ||||||||||| |||||| |||||||||||| |||||  ||||| ||||| ||| || |||||||    
T  2293475 gagtttacgttgttaggtgccaaaatcgtgtaaactcgaaggtagactcattttttgataaaatc 2293411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 183
Target Start/End: Original strand, 8122211 - 8122294
Alignment:
Q  99 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgaccgagttaa 183  Q
    |||||||||||||||  |||||||||||||| |||||  |  |||||||  ||| ||||||||| |||| | |||||||||||||    
T  8122211 gagtttacgtttttaaataccaaaatcgtgtaaactcgaacttaaactcgttttttggtaaaattgaaaag-ttgaccgagttaa 8122294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 11579199 - 11579123
Alignment:
Q  99 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 175  Q
    |||||||||| ||||||| | |||| |||||||||||  ||||||| |   ||||||||||||||| || |||||||    
T  11579199 gagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaatttgatttctggtaaaatcggaaagtttgac 11579123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 112 - 172
Target Start/End: Complemental strand, 42304586 - 42304526
Alignment:
Q  112 taggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggttt 172  Q
    ||||| |||||||| |||||| ||  |||||||||| |||||||||||||| | |||||||    
T  42304586 taggtgccaaaatcatgttaattcggaggtaaactcggtttctggtaaaattggaaggttt 42304526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 1e-38; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 49501324 - 49501211
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||  |||||||||| ||||||||||    
T  49501324 caatgttctgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctggta 49501225  T
Q  159 aaatcgaaaggttt 172  Q
    |||||| |||||||    
T  49501224 aaatcggaaggttt 49501211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 49507389 - 49507276
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||  |||||||||| ||||||||||    
T  49507389 caatgttctgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctggta 49507290  T
Q  159 aaatcgaaaggttt 172  Q
    |||||| |||||||    
T  49507289 aaatcggaaggttt 49507276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 53 - 175
Target Start/End: Original strand, 32889851 - 32889973
Alignment:
Q  53 tcaaagcaatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagttt 152  Q
    |||||||||||||||||||||||||||||||||||||||  |||| |||||||||| |||||||||||||||||||||||||   | ||||||||| |||    
T  32889851 tcaaagcaatgttccgcaaatcgagtgttaactctccgaatttaccgagtttacgtgtttaggtaccaaaatcgtgttaactttgatgtaaactcaattt 32889950  T
Q  153 ctggtaaaatcgaaaggtttgac 175  Q
    |||||||||||  ||||||||||    
T  32889951 ctggtaaaatcagaaggtttgac 32889973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 59 - 169
Target Start/End: Original strand, 32322476 - 32322586
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||| ||  |||||||||| ||||||||||    
T  32322476 caatgttccgcaagtcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaattctgaggtaaactcggtttctggta 32322575  T
Q  159 aaatcgaaagg 169  Q
    |||||| ||||    
T  32322576 aaatcggaagg 32322586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 29510208 - 29510092
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||||||||||||| |||  |||||||||| |||||||| |||||||||||||||||  | ||||||||| |||||||||    
T  29510208 caatgttccgcaaatcgagtgttaactctccgagtttatcgagtttacgtgtttaggtatcaaaatcgtgttaactctgatgtaaactcaatttctggta 29510109  T
Q  159 aaatcgaaaggtttgac 175  Q
    |||||  ||||||||||    
T  29510108 aaatcagaaggtttgac 29510092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 30967134 - 30967021
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||  || |||| |  ||||||||||    
T  30967134 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgagataaaattggtttctggta 30967035  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  30967034 aaattggaaggttt 30967021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 5800374 - 5800487
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||||||||||||| |||  |||||||| ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  5800374 caatgttccgcaaatcgagtgttaactctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaattcggtttctggta 5800473  T
Q  159 aaatcgaaaggttt 172  Q
    | |||  |||||||    
T  5800474 acatcagaaggttt 5800487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 23987607 - 23987719
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||| ||||||||||||||||  ||||||| |  ||||||||||    
T  23987607 caatgttccgcaaatcgagtgttacctctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaa-ttggtttctggta 23987705  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  23987706 aaattggaaggttt 23987719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 27768474 - 27768587
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||||||||||||||||||| |||||||| |||  |||||||| ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  27768474 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 27768573  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  27768574 aaattggaaggttt 27768587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 60 - 172
Target Start/End: Original strand, 28484306 - 28484419
Alignment:
Q  60 aatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaa-tcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||| |||||||||||||| ||| |||| |||||||||||||||||||| |||| ||||||||||||  |||||||||| ||||||||||    
T  28484306 aatgttccgcaaattgagtgttaactctctgagattaccgagtttacgtttttaggtacaaaaagtcgtgttaactctgaggtaaactcggtttctggta 28484405  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  28484406 aaattggaaggttt 28484419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 41725523 - 41725636
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||  |||||||||||||||||||||| | ||||  ||||||||||||||||||| ||||||||||||||||  ||||||||||  |||||||||    
T  41725523 caatgttcttcaaatcgagtgttaactctccgtgattacctagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcgatttctggta 41725622  T
Q  159 aaatcgaaaggttt 172  Q
    |||||| |||||||    
T  41725623 aaatcggaaggttt 41725636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 49834625 - 49834512
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||| |||| ||||||||||||||  || |||| |||||||||||||||| ||| ||||||||||||||||  |||||||||| ||||||||||    
T  49834625 caatgttccgtaaattgagtgttaactctctaagattaccgagtttacgtttttagctacaaaaatcgtgttaactctgaggtaaactcggtttctggta 49834526  T
Q  159 aaatcgaaaggttt 172  Q
    |||||| |||||||    
T  49834525 aaatcggaaggttt 49834512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 50018602 - 50018715
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||| ||||||||||||||||||||||||| |||| |||||||| ||||||||||| |||||| |||||||||  ||||||| || ||||||||||    
T  50018602 caatgttctgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcatgttaactctgaggtaaaatcggtttctggta 50018701  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  50018702 aaattggaaggttt 50018715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 54341552 - 54341665
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||||||||||||||||||| |||||||| |||  |||||||| ||||||||||| |||||||||| |||||  ||||||| || ||||||||||    
T  54341552 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgtaaactctgaggtaaaatcggtttctggta 54341651  T
Q  159 aaatcgaaaggttt 172  Q
    |||| |||||||||    
T  54341652 aaattgaaaggttt 54341665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 60 - 183
Target Start/End: Original strand, 33138771 - 33138885
Alignment:
Q  60 aatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaa 159  Q
    |||||||||||||||||||||||||||||||||         ||||||| ||||||||||||||||||||||||||  ||||||||||  ||||||||||    
T  33138771 aatgttccgcaaatcgagtgttaactctccgag---------tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtaa 33138861  T
Q  160 aatcgaaaggtttgaccgagttaa 183  Q
    ||||| |||||||||| |||||||    
T  33138862 aatcggaaggtttgactgagttaa 33138885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 48261488 - 48261601
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||||||||||||||||||| |||||||| |||  ||||| || ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  48261488 caatgttccgcaaatcgagtgttaaatctccgagattatcgagttgacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 48261587  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  48261588 aaattggaaggttt 48261601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 51321266 - 51321379
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||||||||||||  |||  |||||||| ||||||||||| ||||||||||||||||  | ||||| || ||||||||||    
T  51321266 caatgttccgcaaatcgagtgttaactctccgatattatcgagtttacatttttaggtacaaaaatcgtgttaactctgacgtaaaatcggtttctggta 51321365  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  51321366 aaattggaaggttt 51321379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 23671516 - 23671400
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||| | ||| ||| |||| |  ||||||| ||||||||||||||||||||||||||  ||||||||||  ||||||||     
T  23671516 caatgttccgcaaatcgagtgttagcactctgagtttaccggttttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtg 23671417  T
Q  159 aaatcgaaaggtttgac 175  Q
    ||||||||| |||||||    
T  23671416 aaatcgaaaagtttgac 23671400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 5441812 - 5441925
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||| ||||||| |||||| |||||||| |||  |||||||| ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  5441812 caatgttccgtaaatcgaatgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 5441911  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  5441912 aaattggaaggttt 5441925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 29855926 - 29856039
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||  ||||||||| |||| |||||||| |||| ||||||||||||||| |||| ||||||||||||||||  ||||||||||  |||||||||    
T  29855926 caatgttccataaatcgagtattaattctccgagattaccgagtttacgtttttatgtacaaaaatcgtgttaactctgaggtaaactcgatttctggta 29856025  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  29856026 aaattggaaggttt 29856039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 37828221 - 37828108
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||| |||||| |||||||| |||  |||||||| ||||||| ||| ||||||||||||||||  ||||||| || ||||||||||    
T  37828221 caatgttccgcaaatcgaatgttaaatctccgagattatcgagtttacatttttagatacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 37828122  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  37828121 aaattggaaggttt 37828108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 59 - 162
Target Start/End: Complemental strand, 54853267 - 54853164
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||| |||||||||||||||||||||||| |||| |||||||| |||||| |||| ||||| ||||||||||  ||||||| || |||||| |||    
T  54853267 caatgttccacaaatcgagtgttaactctccgagattaccgagtttacctttttatgtacaaaaattgtgttaactctgaggtaaaatcggtttctcgta 54853168  T
Q  159 aaat 162  Q
    ||||    
T  54853167 aaat 54853164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 70 - 175
Target Start/End: Original strand, 871782 - 871886
Alignment:
Q  70 aaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaagg 169  Q
    |||||||||||||||||  |||| |||| ||||||||||||||||||||| ||||||||| |||||  ||||||||||  ||||||||||||||| || |    
T  871782 aaatcgagtgttaactcgtcgagtttaccgagtttacgtttttaggtacc-aaatcgtgtcaactcggaggtaaactcgatttctggtaaaatcggaatg 871880  T
Q  170 tttgac 175  Q
    ||||||    
T  871881 tttgac 871886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 58 - 175
Target Start/End: Original strand, 46286678 - 46286786
Alignment:
Q  58 gcaatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggt 157  Q
    |||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||| |  ||||||||||  ||||| ||    
T  46286678 gcaatgttccgcaaatcgagtgttaactctccgag---------tttacgtttttaggtaccaaaatcgtgttaacactaaggtaaactcgatttctagt 46286768  T
Q  158 aaaatcgaaaggtttgac 175  Q
    ||| ||| ||||||||||    
T  46286769 aaactcggaaggtttgac 46286786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 50517163 - 50517270
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||||||||||||||||||||||||||||         ||||||| |||||||||||||||||||||||||   ||||||||||  |||||||||    
T  50517163 caatgttccgcaaatcgagtgttaactctccgag---------tttacgtgtttaggtaccaaaatcgtgttaactttgaggtaaactcgatttctggta 50517253  T
Q  159 aaatcgaaaggtttgac 175  Q
    |||| | ||||||||||    
T  50517254 aaattggaaggtttgac 50517270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 59 - 163
Target Start/End: Original strand, 55165486 - 55165590
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||| ||||||||||| ||||||  |||| |||||||||||||||||||| ||||||||||||| ||||||   |||||||||   ||| |||||    
T  55165486 caatgttccacaaatcgagtgctaactcgtcgagtttactgagtttacgtttttacgtaccaaaatcgtattaacttggaggtaaacttgatttatggta 55165585  T
Q  159 aaatc 163  Q
    |||||    
T  55165586 aaatc 55165590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 97 - 175
Target Start/End: Complemental strand, 26491227 - 26491149
Alignment:
Q  97 ctgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 175  Q
    |||||||||||| ||||||||||||||||||||||| |   |||||||||| |||||||||||||||  ||||||||||    
T  26491227 ctgagtttacgtgtttaggtaccaaaatcgtgttaaatttgaggtaaactcggtttctggtaaaatcagaaggtttgac 26491149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 32683818 - 32683746
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaa 132  Q
    ||||||||| |||||||||||||||||||| ||| |||| ||| |||||||||||||||| |||||||||||||    
T  32683818 caatgttccacaaatcgagtgttaactctcagagattaccgag-ttacgtttttaggtacaaaaatcgtgttaa 32683746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 59 - 135
Target Start/End: Original strand, 37916211 - 37916287
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactc 135  Q
    ||||||||||||||| |||||||||||||||||| |||  |||||||| |||||| |||| ||||| ||||||||||    
T  37916211 caatgttccgcaaattgagtgttaactctccgagattatcgagtttacatttttatgtacaaaaattgtgttaactc 37916287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 56 - 175
Target Start/End: Original strand, 29469121 - 29469240
Alignment:
Q  56 aagcaatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctg 155  Q
    |||||||||| | ||||||| |||| || ||  |||| |||| |||||||||| ||||||| | |||| |||||||||||  ||||||||||  ||||||    
T  29469121 aagcaatgtttcacaaatcgcgtgtcaattcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctg 29469220  T
Q  156 gtaaaatcgaaaggtttgac 175  Q
    ||||||||| || |||||||    
T  29469221 gtaaaatcggaaagtttgac 29469240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 60 - 173
Target Start/End: Complemental strand, 24966651 - 24966547
Alignment:
Q  60 aatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaa 159  Q
    |||||| ||||||||||||||||||||||||||         ||||||| ||||||||||||||||||||||||||  | ||||| || |||| ||||||    
T  24966651 aatgtttcgcaaatcgagtgttaactctccgag---------tttacgtgtttaggtaccaaaatcgtgttaactcggaagtaaattcggtttttggtaa 24966561  T
Q  160 aatcgaaaggtttg 173  Q
    ||| | ||||||||    
T  24966560 aatgggaaggtttg 24966547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 8084170 - 8084286
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||| |||| || |||| |||||  |||| |||| |||||||||| ||||||| | |||| |||||||||||  ||||||||||  ||||| |||    
T  8084170 caatgttccacaaaccgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagta 8084269  T
Q  159 aaatcgaaaggtttgac 175  Q
    |||||| || |||||||    
T  8084270 aaatcggaaagtttgac 8084286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 51967278 - 51967354
Alignment:
Q  99 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 175  Q
    ||||||||||||||||||  ||||| |||||||||||  |||||||||| |||| |||| ||||||||| |||||||    
T  51967278 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcgaaaagtttgac 51967354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 42937514 - 42937437
Alignment:
Q  98 tgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 175  Q
    ||||||||||| ||||||| | |||| ||| |||||||  ||||||||||  |||||||||||||||||| |||||||    
T  42937514 tgagtttacgtatttaggtgctaaaagcgttttaactcggaggtaaactcgatttctggtaaaatcgaaaagtttgac 42937437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 103 - 183
Target Start/End: Complemental strand, 41470424 - 41470344
Alignment:
Q  103 ttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgaccgagttaa 183  Q
    ||||||||||||||  ||||| |||||||||||  |||||||||| |||| |||| |||| | || |||||||||||||||    
T  41470424 ttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaattggaaagtttgaccgagttaa 41470344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 46863017 - 46862941
Alignment:
Q  99 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 175  Q
    |||||||||| ||||||||| ||||| |||||||||   | ||||| ||  ||||||||||||||||||||||||||    
T  46863017 gagtttacgtgtttaggtactaaaattgtgttaactatgaagtaaattcgatttctggtaaaatcgaaaggtttgac 46862941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 6487420 - 6487344
Alignment:
Q  99 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 175  Q
    ||||||||||||||||||  ||||| |||||||||||  ||||||||||  ||| |||| |||||| || |||||||    
T  6487420 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcggaaagtttgac 6487344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 157
Target Start/End: Complemental strand, 40487763 - 40487703
Alignment:
Q  97 ctgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggt 157  Q
    ||||||||||||||||||||  ||||| |||||||||||  |||||||||| |||| ||||    
T  40487763 ctgagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggt 40487703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 56424077 - 56424002
Alignment:
Q  99 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttga 174  Q
    ||||||||||||||||||  ||||| |||||||||||  |||||||||| |||| | || |||||| || ||||||    
T  56424077 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttagtgaaatcggaaagtttga 56424002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 183
Target Start/End: Complemental strand, 2326765 - 2326680
Alignment:
Q  97 ctgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgaccgagttaa 183  Q
    |||| |||||||||||||||||||||||||||| ||||   | |||||||   ||||| ||||||| |||| | |||||||||||||    
T  2326765 ctgaatttacgtttttaggtaccaaaatcgtgtaaacttggatgtaaacttgttttctagtaaaattgaaaag-ttgaccgagttaa 2326680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 97
Target Start/End: Original strand, 12754489 - 12754526
Alignment:
Q  60 aatgttccgcaaatcgagtgttaactctccgagcttac 97  Q
    ||||||||||||||||||||||||||| ||||| ||||    
T  12754489 aatgttccgcaaatcgagtgttaactcgccgagtttac 12754526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 12754539 - 12754592
Alignment:
Q  141 taaactcagtttctggtaaaatcgaaaggtttgaccgagttaaaactcgataaa 194  Q
    ||||||| |||||||||||||||  || ||||||||||||||| ||||| ||||    
T  12754539 taaactctgtttctggtaaaatcagaaagtttgaccgagttaacactcggtaaa 12754592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 14334395 - 14334460
Alignment:
Q  99 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcg 164  Q
    |||||||||||||||||||||||||||| || |||||  | |||||||   ||| |||||||||||    
T  14334395 gagtttacgtttttaggtaccaaaatcgcgtaaactcggacgtaaacttgttttttggtaaaatcg 14334460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 67 - 175
Target Start/End: Complemental strand, 39419 - 39311
Alignment:
Q  67 cgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaa 166  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |  |||| ||||| ||||||||||||||||||    
T  39419 cgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtaccaaaatcgtgttaaccctgaggtcaactcggtttctggtaaaatcgaa 39320  T
Q  167 aggtttgac 175  Q
    |||||||||    
T  39319 aggtttgac 39311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1128 (Bit Score: 79; Significance: 8e-37; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 56 - 174
Target Start/End: Complemental strand, 1047 - 929
Alignment:
Q  56 aagcaatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctg 155  Q
    ||||||||||||||||||||||||||||| ||| ||| |||| |||||||||| ||||||||||||||||||||||||||  |||||||||| |||||||    
T  1047 aagcaatgttccgcaaatcgagtgttaacactctgagtttaccgagtttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcggtttctg 948  T
Q  156 gtaaaatcgaaaggtttga 174  Q
    ||||||||| || ||||||    
T  947 gtaaaatcggaaagtttga 929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 57856 - 57743
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||  |||||||||| |||||| |||    
T  57856 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctagta 57757  T
Q  159 aaatcgaaaggttt 172  Q
    |||||  |||||||    
T  57756 aaatcagaaggttt 57743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 3e-36; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 52810766 - 52810879
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||| ||||||||||  |||||||||| | ||||||||    
T  52810766 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaattgtgttaactctgaggtaaactcgggttctggta 52810865  T
Q  159 aaatcgaaaggttt 172  Q
    |||||| |||||||    
T  52810866 aaatcggaaggttt 52810879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 64 - 172
Target Start/End: Original strand, 20833310 - 20833418
Alignment:
Q  64 ttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatc 163  Q
    ||||||||||||||||||||||||| ||| |||  |||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||    
T  20833310 ttccgcaaatcgagtgttaactctctgagattatcgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcagtttctggtaaaatc 20833409  T
Q  164 gaaaggttt 172  Q
    | |||||||    
T  20833410 ggaaggttt 20833418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 21386624 - 21386508
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||| |||||||||||||||||||||||| |||| |||||||| |||||||||| |||||||||||||||| | ||||||||||  |||||||||    
T  21386624 caatgttccccaaatcgagtgttaactctccgagtttaccgagtttacatttttaggtatcaaaatcgtgttaacttagaggtaaactcgatttctggta 21386525  T
Q  159 aaatcgaaaggtttgac 175  Q
    ||||||||| |||||||    
T  21386524 aaatcgaaaagtttgac 21386508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 59 - 213
Target Start/End: Original strand, 48379558 - 48379721
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||| ||  ||||||||||  |||||||||    
T  48379558 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaattctgaggtaaactcgatttctggta 48379657  T
Q  159 aaatcgaaag---------gtttgaccgagttaaaactcgataaattcgtgtaaaattgaccga 213  Q
    |||||| |||         ||||||| ||||||| ||||| |||| ||||||||| ||||||||    
T  48379658 aaatcggaaggcttaacgagtttgactgagttaacactcggtaaactcgtgtaaacttgaccga 48379721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 37455255 - 37455368
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  37455255 caatgttccgcaaatcgagtgttaactctccgagattaccgagcttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 37455354  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  37455355 aaattggaaggttt 37455368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 52617764 - 52617651
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||||||||| ||| |||  || ||||||||||||||||| ||||||||||||||||  |||||||||| ||||||||||    
T  52617764 caatgttccgcaaatcgagtgttaactctctgagattatcgaatttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctggta 52617665  T
Q  159 aaatcgaaaggttt 172  Q
    |||||| |||||||    
T  52617664 aaatcggaaggttt 52617651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 61 - 172
Target Start/End: Original strand, 17946638 - 17946749
Alignment:
Q  61 atgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaa 160  Q
    ||||||||||||||||||||||| |||||||| |||  |||||||||||||||||||| |||||| |||||||||  |||||||||| ||||||||||||    
T  17946638 atgttccgcaaatcgagtgttaattctccgagattatcgagtttacgtttttaggtacaaaaatcatgttaactctgaggtaaactcggtttctggtaaa 17946737  T
Q  161 atcgaaaggttt 172  Q
    |||| |||||||    
T  17946738 atcggaaggttt 17946749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 59 - 162
Target Start/End: Original strand, 18750051 - 18750154
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||| |||||| |||||||||  |||||||||| ||||||||||    
T  18750051 caatgttccgcaaatcgagtgttaactctctgatattactgagtttacgtttttaggtacaaaaatcatgttaactctgaggtaaactcggtttctggta 18750150  T
Q  159 aaat 162  Q
    ||||    
T  18750151 aaat 18750154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 60 - 170
Target Start/End: Complemental strand, 7437710 - 7437600
Alignment:
Q  60 aatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaa 159  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||| |  || ||||||| |||| ||||||    
T  7437710 aatgttccgcaaatcgagtgttaactctccgagtttactgagtttacttgtttaggtaccaaaatcgtgttaacacggagataaactcggtttttggtaa 7437611  T
Q  160 aatcgaaaggt 170  Q
    ||||| |||||    
T  7437610 aatcggaaggt 7437600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 31646053 - 31645940
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||| |||||||||||||||||||||||||| |||| ||| |||||||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  31646053 caatgtttcgcaaatcgagtgttaactctccgagattaccgagcttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 31645954  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  31645953 aaattggaaggttt 31645940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 51737479 - 51737366
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||||||||| ||| |||  |||||||| ||||||||||| ||||||||||||||||  |||||||||| |||||| |||    
T  51737479 caatgttccgcaaatcgagtgttaactctctgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctagta 51737380  T
Q  159 aaatcgaaaggttt 172  Q
    |||||| |||||||    
T  51737379 aaatcggaaggttt 51737366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 54629259 - 54629372
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||||||||| |||||||||||||| ||| |||| |||||||||||||||||||| ||||||||||||||||  ||||||||||  |||||| ||    
T  54629259 caatgttccgcaaattgagtgttaactctctgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcgatttctgata 54629358  T
Q  159 aaatcgaaaggttt 172  Q
    ||| ||||||||||    
T  54629359 aaagcgaaaggttt 54629372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 59 - 163
Target Start/End: Complemental strand, 44905647 - 44905543
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||| ||||||||||||| ||  |||||| ||| ||||||||||    
T  44905647 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgttcttaggtacaaaaatcgtgttaattctgaggtaatctcggtttctggta 44905548  T
Q  159 aaatc 163  Q
    |||||    
T  44905547 aaatc 44905543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 23753181 - 23753068
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||| |||||||||||||||||||||||||| |||| |||||||| ||||||||||| ||||||||||||||||  ||||||| || |||| |||||    
T  23753181 caatgtttcgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttttggta 23753082  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  23753081 aaattggaaggttt 23753068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 26107737 - 26107850
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||||||||||||||| |||||||||||| |||  |||||||||||||||||||| |||||| |||||||||  ||||||||||  |||||||||    
T  26107737 caatgttccgcaaatcgagtgataactctccgagattaacgagtttacgtttttaggtacaaaaatcatgttaactctgaggtaaactcgatttctggta 26107836  T
Q  159 aaatcgaaaggttt 172  Q
     ||||| |||||||    
T  26107837 caatcggaaggttt 26107850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 39038498 - 39038611
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||| |||||||||||||||||||| ||| |||  || ||||||||||||||||| ||||| ||||||||||  |||||||||| ||||||||||    
T  39038498 caatgttccacaaatcgagtgttaactctctgagattatcgaatttacgtttttaggtacaaaaatggtgttaactctgaggtaaactcggtttctggta 39038597  T
Q  159 aaatcgaaaggttt 172  Q
    |||||| |||||||    
T  39038598 aaatcggaaggttt 39038611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 68 - 242
Target Start/End: Original strand, 33693226 - 33693409
Alignment:
Q  68 gcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaa 167  Q
    ||||||||| ||||||||||||||| |||| ||||||| | |||||  |||||||||||||||||||   ||||||||||  ||||||||||||||  ||    
T  33693226 gcaaatcgaatgttaactctccgagtttaccgagtttatgattttacataccaaaatcgtgttaacttggaggtaaactcgatttctggtaaaatcagaa 33693325  T
Q  168 g---------gtttgaccgagttaaaactcgataaattcgtgtaaaattgaccgaattttacgagtttacatctaaaaatataa 242  Q
    |         ||||||||||||||| ||||| |||| ||||||||| | |||||| ||||||| ||||||||||||||| ||||    
T  33693326 ggtttgacgagtttgaccgagttaacactcggtaaactcgtgtaaactcgaccgagttttacgtgtttacatctaaaaagataa 33693409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 40897539 - 40897652
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||| ||||||||||||||||||||| |||| || |||||| |||||||||| ||||||||||||||||  ||||||| || ||||||| ||    
T  40897539 caatgttccgcagatcgagtgttaactctccgagattaccgaatttacgattttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctgata 40897638  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  40897639 aaattggaaggttt 40897652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 59 - 144
Target Start/End: Complemental strand, 50761892 - 50761807
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaa 144  Q
    |||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||  |||||||    
T  50761892 caatgttcagcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaa 50761807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 50903101 - 50902988
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||| ||||| ||||||||||||||||||||  ||  ||||||||||||||| |||| ||||||||||||||||  |||||||||| ||||||||||    
T  50903101 caatgtttcgcaagtcgagtgttaactctccgagaatatcgagtttacgtttttatgtacaaaaatcgtgttaactctgaggtaaactcggtttctggta 50903002  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  50903001 aaattggaaggttt 50902988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 102 - 243
Target Start/End: Original strand, 16155168 - 16155318
Alignment:
Q  102 tttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaag---------gtttgaccgagttaaaactcgata 192  Q
    ||||||||||||||||||||||||||||||||||  |||||||||| |||| || |||||| | |||         ||||||||||||||| ||||  ||    
T  16155168 tttacgtttttaggtaccaaaatcgtgttaactctgaggtaaactcggtttttgataaaattggaaggtttgacgagtttgaccgagttaacactcagta 16155267  T
Q  193 aattcgtgtaaaattgaccgaattttacgagtttacatctaaaaatataat 243  Q
    || ||||||||| | |||||| ||||||||||||||||||||||| |||||    
T  16155268 aactcgtgtaaactcgaccgagttttacgagtttacatctaaaaaaataat 16155318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 60 - 174
Target Start/End: Original strand, 43172889 - 43173003
Alignment:
Q  60 aatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaa 159  Q
    ||||||||||||||||| ||||||||||   || |||  ||||||| || ||||||||||||||||||||| ||||  ||||||||||  ||||||||||    
T  43172889 aatgttccgcaaatcgaatgttaactctttaagtttatcgagtttatgtgtttaggtaccaaaatcgtgttgactcggaggtaaactcgatttctggtaa 43172988  T
Q  160 aatcgaaaggtttga 174  Q
    |||||||||||||||    
T  43172989 aatcgaaaggtttga 43173003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 58 - 175
Target Start/End: Complemental strand, 4962872 - 4962755
Alignment:
Q  58 gcaatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggt 157  Q
    |||||||||||||||| ||| ||||||||||  || |||  ||||||||||||||||||| ||||||||||||||||   ||||||||||  ||||  ||    
T  4962872 gcaatgttccgcaaattgagcgttaactctctaagtttatcgagtttacgtttttaggtatcaaaatcgtgttaacttggaggtaaactcgatttcaagt 4962773  T
Q  158 aaaatcgaaaggtttgac 175  Q
    ||||||||||||||||||    
T  4962772 aaaatcgaaaggtttgac 4962755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 59 - 164
Target Start/End: Original strand, 7665552 - 7665657
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||| |||||||||||||||||| ||||  ||||  ||||||||||||||| ||||||||||||||||||||  ||||||||||  ||| |||||    
T  7665552 caatgttccacaaatcgagtgttaactcgccgaatttacctagtttacgtttttagctaccaaaatcgtgttaactcggaggtaaactcgatttttggta 7665651  T
Q  159 aaatcg 164  Q
    ||||||    
T  7665652 aaatcg 7665657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 71 - 175
Target Start/End: Complemental strand, 45602545 - 45602441
Alignment:
Q  71 aatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggt 170  Q
    |||||||||||||||| ||||| |||| || ||||||||||| ||||  ||||| |||| ||||| |||||||||||| |||||||||||||||||| ||    
T  45602545 aatcgagtgttaactcgccgagtttaccgaatttacgtttttgggtattaaaattgtgtcaactcgtaggtaaactcaatttctggtaaaatcgaaatgt 45602446  T
Q  171 ttgac 175  Q
    |||||    
T  45602445 ttgac 45602441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 59 - 135
Target Start/End: Original strand, 45863231 - 45863307
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactc 135  Q
    |||||||||||||||||||||||||||||| ||| |||  |||||||||||||||||||| ||||||||||||||||    
T  45863231 caatgttccgcaaatcgagtgttaactctctgagattaaagagtttacgtttttaggtacaaaaatcgtgttaactc 45863307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 36673944 - 36673831
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||| |||||||||||||||| |||||||| |||  ||||| || |||||| |||| ||||||||||||||||  ||||||| || ||||||||||    
T  36673944 caatgttctgcaaatcgagtgttaaatctccgagattatcgagttgacatttttaagtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 36673845  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  36673844 aaattggaaggttt 36673831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 49296077 - 49296193
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||| ||||||| |||| |||||  |||| |||| |||||||||| ||||||| | |||| |||||||||||  ||||||||||  |||||||||    
T  49296077 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 49296176  T
Q  159 aaatcgaaaggtttgac 175  Q
    ||||||||| |||||||    
T  49296177 aaatcgaaaagtttgac 49296193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 8598620 - 8598736
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||| ||||||| |||| |||||  |||| |||| |||||||||| ||||||| | |||| |||||||||||  ||||||||||  |||||||||    
T  8598620 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 8598719  T
Q  159 aaatcgaaaggtttgac 175  Q
    |||||| || |||||||    
T  8598720 aaatcggaaagtttgac 8598736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 60 - 160
Target Start/End: Complemental strand, 21718552 - 21718452
Alignment:
Q  60 aatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaa 159  Q
    ||||||||  |||||||||||||||||  |||  |||||||||||||||||| || |||||||||||||| |||||| || |||||||  ||||| ||||    
T  21718552 aatgttccaaaaatcgagtgttaactcgtcgattttactgagtttacgttttaagataccaaaatcgtgtcaactcaaagataaactcgatttctagtaa 21718453  T
Q  160 a 160  Q
    |    
T  21718452 a 21718452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 25049872 - 25049947
Alignment:
Q  99 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttga 174  Q
    ||||||||||||||||||||||||||||||| |||||  ||||||||||  ||||| ||||||||| || ||||||    
T  25049872 gagtttacgtttttaggtaccaaaatcgtgtcaactcggaggtaaactcgatttctagtaaaatcggaatgtttga 25049947  T

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Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 99 - 235
Target Start/End: Original strand, 49458359 - 49458504
Alignment:
Q  99 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaag---------gtttgaccgagttaaaactcg 189  Q
    |||||||||| |||||||| |||||| ||||||||||  | ||||||||  ||||||||||||||| |||         |||||||| | |||| ||||     
T  49458359 gagtttacgtgtttaggtatcaaaattgtgttaactctgaagtaaactcgatttctggtaaaatcggaaggtttgacgagtttgaccaaattaacactca 49458458  T
Q  190 ataaattcgtgtaaaattgaccgaattttacgagtttacatctaaa 235  Q
     |||| ||||||||| | |||||| |||||||||||||||||||||    
T  49458459 gtaaactcgtgtaaactcgaccgagttttacgagtttacatctaaa 49458504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 42736268 - 42736384
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||| ||||| |||||||| |   |||| |||  |||||| ||||||||| ||||||||||||||||||    || |||||| |||||||||||    
T  42736268 caatgttccgtaaatcaagtgttaatttgtcgagtttatcgagtttgcgtttttagataccaaaatcgtgttaacattgagataaacttagtttctggta 42736367  T
Q  159 aaatcgaaaggtttgac 175  Q
    ||||| ||| |||||||    
T  42736368 aaatcaaaaagtttgac 42736384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 22489584 - 22489511
Alignment:
Q  99 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggttt 172  Q
    |||||||||| ||||||| |||||| |||||||| ||| | ||||||||  ||||||||||||||| |||||||    
T  22489584 gagtttacgtgtttaggtgccaaaaacgtgttaaatcagatgtaaactcgatttctggtaaaatcggaaggttt 22489511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 53835923 - 53836039
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||| ||||||| |||| || ||  |||| |||| |||||||||| ||||||| | |||| ||||||||||   |||||||||   |||||||||    
T  53835923 caatgttccacaaatcgcgtgtcaattcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaacttggaggtaaacttgatttctggta 53836022  T
Q  159 aaatcgaaaggtttgac 175  Q
    |||||| || |||||||    
T  53836023 aaatcggaaagtttgac 53836039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 175
Target Start/End: Complemental strand, 53645415 - 53645337
Alignment:
Q  97 ctgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 175  Q
    ||||||| ||||||||||||  ||||| ||| | |||||| ||||||||||||||| |||| |||||| || |||||||    
T  53645415 ctgagttaacgtttttaggtggcaaaaacgtataaactcagaggtaaactcagtttttggtgaaatcggaaagtttgac 53645337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 9818664 - 9818588
Alignment:
Q  99 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 175  Q
    ||||||||||||||||||  ||||| |||||||||||  ||||||||||  ||| |||| |||||| || |||||||    
T  9818664 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcggaaagtttgac 9818588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 40064279 - 40064355
Alignment:
Q  99 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 175  Q
    ||||||||||||||||||  ||||| ||||| ||||   ||||||| | ||||| |||| ||||||||| |||||||    
T  40064279 gagtttacgtttttaggtggcaaaaacgtgtaaacttggaggtaaatttagtttttggtgaaatcgaaaagtttgac 40064355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 1e-35; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 59 - 163
Target Start/End: Complemental strand, 215049 - 214945
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||||||||| ||||||||||| |||||| |||| || ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  215049 caatgttccgcaaattgagtgttaactttccgagattaccgaatttacgtttttaggtaccaaaatcgtgttaactctaaggtaaactcagtttctggta 214950  T
Q  159 aaatc 163  Q
    |||||    
T  214949 aaatc 214945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 6224369 - 6224256
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||  ||||||||||||||| ||||| ||||| |||||| |||    
T  6224369 caatgttccgcaaatcgagtgttaactctccgagattatcgagtttacgtttttaggtacacaaatcgtgttaactcttaggtgaactcggtttctagta 6224270  T
Q  159 aaatcgaaaggttt 172  Q
    |||||| |||||||    
T  6224269 aaatcggaaggttt 6224256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 58 - 175
Target Start/End: Original strand, 15224190 - 15224307
Alignment:
Q  58 gcaatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggt 157  Q
    ||||||||||||||||||||||||||| ||||||| ||||  | ||||||| ||||||||||||||||||||||||||| ||||||||||  ||||||||    
T  15224190 gcaatgttccgcaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcagaggtaaactcgatttctggt 15224289  T
Q  158 aaaatcgaaaggtttgac 175  Q
     ||||||||| |||||||    
T  15224290 gaaatcgaaaagtttgac 15224307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 28740086 - 28739973
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  28740086 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttatgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 28739987  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  28739986 aaattggaaggttt 28739973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 7027313 - 7027426
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||||||||||||||||||| |||||||| |||  |||||||| ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  7027313 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 7027412  T
Q  159 aaatcgaaaggttt 172  Q
    |||| |||||||||    
T  7027413 aaattgaaaggttt 7027426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 25288573 - 25288686
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||| | ||||||||||||| |||| |||||||| ||||||||||| ||||||||||||||||  |||||||||| |||||| |||    
T  25288573 caatgttccgcaaatcgaatattaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctagta 25288672  T
Q  159 aaatcgaaaggttt 172  Q
    |||||| |||||||    
T  25288673 aaatcggaaggttt 25288686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 34342199 - 34342315
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||  | ||||| | |  |||||||||| ||||||||||    
T  34342199 caatgttccgcaaatcgagtgttaactctctgagtttaccgagtttacgtttttaggtaccaaatccatgttagcactaaggtaaactcggtttctggta 34342298  T
Q  159 aaatcgaaaggtttgac 175  Q
    || ||| ||||||||||    
T  34342299 aactcggaaggtttgac 34342315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 60 - 175
Target Start/End: Original strand, 40829596 - 40829713
Alignment:
Q  60 aatgttccgcaaatcgagtgttaactctccgagc--ttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggt 157  Q
    ||||||||| |||| ||||||||||||||||||   |||| |||| ||| |||||||||| |||||||||||||||||  |||||||||| |||||||||    
T  40829596 aatgttccgtaaattgagtgttaactctccgagagtttaccgagtctacatttttaggtatcaaaatcgtgttaactcggaggtaaactcggtttctggt 40829695  T
Q  158 aaaatcgaaaggtttgac 175  Q
    ||||| ||||||||||||    
T  40829696 aaaatagaaaggtttgac 40829713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 10657840 - 10657953
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||| ||||||||||||||||||| ||| |||| |||||||||||||||||||| ||||||||||||||||  ||||||| ||  ||| |||||    
T  10657840 caatgttccgtaaatcgagtgttaactctctgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcgatttttggta 10657939  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  10657940 aaattggaaggttt 10657953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 28844995 - 28845108
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||| |||||||||||||||||||||||||||| |||  ||||||| |||||||||||| ||||||||||||||||  ||||||| || ||||||| ||    
T  28844995 caatgatccgcaaatcgagtgttaactctccgagattatcgagtttatgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctgata 28845094  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  28845095 aaattggaaggttt 28845108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 59 - 163
Target Start/End: Complemental strand, 13833211 - 13833107
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||||||||| || |||||||||| |||| |||  |||||||||||||||||||| ||||||||||||||||  ||||||||||| ||||| |||    
T  13833211 caatgttccgcaaattgaatgttaactcttcgagattatcgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcaatttctagta 13833112  T
Q  159 aaatc 163  Q
    |||||    
T  13833111 aaatc 13833107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 59 - 169
Target Start/End: Original strand, 379340 - 379450
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||||||||  ||| |||| || ||||||||||||||||| ||||||||||||||||  ||||||| || |||| || ||    
T  379340 caatgttccgcaaatcgagtgttaactctttgagattaccgaatttacgtttttaggtacaaaaatcgtgttaactctgaggtaaattcggtttttgata 379439  T
Q  159 aaatcgaaagg 169  Q
    |||||| ||||    
T  379440 aaatcggaagg 379450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 70 - 239
Target Start/End: Complemental strand, 2308843 - 2308665
Alignment:
Q  70 aaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatc------ 163  Q
    ||||||||||||||||| ||||| ||| | | |||||||||||| |||||||||||||||||||||  ||||||| || |||| ||||||||||          
T  2308843 aaatcgagtgttaactcgccgagtttattaaatttacgtttttatgtaccaaaatcgtgttaactcggaggtaaattcggtttgtggtaaaatcaaaaag 2308744  T
Q  164 ---gaaaggtttgaccgagttaaaactcgataaattcgtgtaaaattgaccgaattttacgagtttacatctaaaaata 239  Q
       || | |||||||| |||||| ||||| |||| ||||||||| | || ||| |||||||||||||| ||||||||||    
T  2308743 tttgacaagtttgaccaagttaacactcggtaaaatcgtgtaaactcgatcgagttttacgagtttacttctaaaaata 2308665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 33136028 - 33136139
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||||||||| |||   || ||||||| |||||||||||| ||||||||||||||||  ||||||||||  |||||||||    
T  33136028 caatgttccgcaaatcgagtgttaactctctgaga--accgagtttatgtttttaggtacaaaaatcgtgttaactctgaggtaaactcgatttctggta 33136125  T
Q  159 aaatcgaaaggttt 172  Q
     ||||| |||||||    
T  33136126 taatcggaaggttt 33136139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 3575251 - 3575364
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||| || |||||||| | |||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||  ||||||| || ||||||||||    
T  3575251 caatgtccctcaaatcgaatattaactatccgagattactgagtttacgtttttaggtacaaaaatcatgttaactctgaggtaaaatcggtttctggta 3575350  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  3575351 aaattggaaggttt 3575364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 26789195 - 26789308
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||| |||||||||||||||| |||||||| |||  ||||| || ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  26789195 caatgttctgcaaatcgagtgttaaatctccgagattatcgagttgacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 26789294  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  26789295 aaattggaaggttt 26789308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 58 - 237
Target Start/End: Complemental strand, 31847360 - 31847171
Alignment:
Q  58 gcaatgttccgcaaatcgagtgttaactctccgagcttactgag-tttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctgg 156  Q
    |||||||||| |||||||||||||||||||||||| |||  ||| ||||||||||||||||  |||||| || ||||||  ||||||||||  ||||||     
T  31847360 gcaatgttcctcaaatcgagtgttaactctccgagtttatcgagttttacgtttttaggtattaaaatcatggtaactcggaggtaaactctatttctga 31847261  T
Q  157 taaaatcgaaaggttt---------gaccgagttaaaactcgataaattcgtgtaaaattgaccgaattttacgagtttacatctaaaaa 237  Q
    |||||||  |||||||         |||||| |||| ||||| |||| |||||||||  ||||||| ||||||||||||| |||||||||    
T  31847260 taaaatcagaaggtttgacgagttcgaccgaattaacactcggtaaactcgtgtaaacatgaccgagttttacgagtttaaatctaaaaa 31847171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 59 - 162
Target Start/End: Original strand, 18177681 - 18177784
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||| |||||||||||||| ||| |||| |||  |||||||| ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  18177681 caatgttccgtaaatcgagtgttaaatcttcgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 18177780  T
Q  159 aaat 162  Q
    ||||    
T  18177781 aaat 18177784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 58 - 175
Target Start/End: Complemental strand, 18900069 - 18899952
Alignment:
Q  58 gcaatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggt 157  Q
    |||||||||| ||||||| |||| |||||  |||| |||| |||||||||| ||||||| | |||| |||||||||||  ||||||||||  ||||| ||    
T  18900069 gcaatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagt 18899970  T
Q  158 aaaatcgaaaggtttgac 175  Q
    ||||||| || |||||||    
T  18899969 aaaatcggaaagtttgac 18899952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 60 - 124
Target Start/End: Original strand, 3464051 - 3464115
Alignment:
Q  60 aatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaat 124  Q
    |||||||||||||||| |||||||||||||||| |||| |||||||| ||||||||||| |||||    
T  3464051 aatgttccgcaaatcgtgtgttaactctccgagattaccgagtttacatttttaggtacaaaaat 3464115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 35404419 - 35404343
Alignment:
Q  99 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 175  Q
    ||||||||||||||||||||| |||||||||||||| | |||||||||| |||| ||||||||| | || |||||||    
T  35404419 gagtttacgtttttaggtaccgaaatcgtgttaacttagaggtaaactcggtttttggtaaaattggaaagtttgac 35404343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 242
Target Start/End: Complemental strand, 18727732 - 18727595
Alignment:
Q  114 ggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac---------cgagttaaaactcgataaattcgtgtaaa 204  Q
    |||||||||| |||||||||||  ||||||||||   ||||||||||||| ||| |||||||         |||||||| | |||||||| |||||||||    
T  18727732 ggtaccaaaaccgtgttaactcggaggtaaactcgaattctggtaaaatcaaaaagtttgacgagtttcaccgagttaacattcgataaactcgtgtaaa 18727633  T
Q  205 attgaccgaattttacgagtttacatctaaaaatataa 242  Q
     | |||||| ||||||||||||| ||||||||| ||||    
T  18727632 ctcgaccgagttttacgagtttatatctaaaaaaataa 18727595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 3991774 - 3991850
Alignment:
Q  99 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 175  Q
    ||||||||||||||||||  ||||| |||||||||||  |||||||||| |||| |||| ||||||||| |||||||    
T  3991774 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcgaaaagtttgac 3991850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 99 - 183
Target Start/End: Original strand, 12877687 - 12877771
Alignment:
Q  99 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgaccgagttaa 183  Q
    ||||||||||||||||||  ||||| |||||||||||  |||||||||| |||| || | |||||| || |||||||||||||||    
T  12877687 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttgatgaaatcggaaagtttgaccgagttaa 12877771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 15926379 - 15926455
Alignment:
Q  99 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 175  Q
    |||||||||||||| |||||||||||||||| |||||  |||| |||||  ||||||||||||||| || |||||||    
T  15926379 gagtttacgttttttggtaccaaaatcgtgtcaactcggaggttaactcgatttctggtaaaatcgcaatgtttgac 15926455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 165
Target Start/End: Complemental strand, 11153447 - 11153384
Alignment:
Q  102 tttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcga 165  Q
    ||||||||||||||| |  |||||||||||||||  |||||||||| |||||||||||||||||    
T  11153447 tttacgtttttaggtgctgaaatcgtgttaactcggaggtaaactcggtttctggtaaaatcga 11153384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 19948539 - 19948615
Alignment:
Q  99 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 175  Q
    |||||||| |||||||||  ||||| |||||||||||  ||||||||||||||| |||| |||||| || |||||||    
T  19948539 gagtttacatttttaggtggcaaaaacgtgttaactcggaggtaaactcagtttttggtgaaatcggaaagtttgac 19948615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 33262854 - 33262930
Alignment:
Q  99 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 175  Q
    ||||||||||||||||||  ||||| ||||| |||||  |||||||||| |||| |||| |||||| || |||||||    
T  33262854 gagtttacgtttttaggtggcaaaaacgtgtaaactcgaaggtaaactcggtttttggtgaaatcggaaagtttgac 33262930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 38413554 - 38413478
Alignment:
Q  99 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 175  Q
    ||||||||||||||||||  ||||| ||||| |||||  |||||||||| |||| |||| |||||| || |||||||    
T  38413554 gagtttacgtttttaggtggcaaaaacgtgtaaactcggaggtaaactcggtttttggtgaaatcggaaagtttgac 38413478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 175
Target Start/End: Original strand, 13898475 - 13898553
Alignment:
Q  97 ctgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 175  Q
    |||||||||||||||||||   ||||| |||||||||||  ||||||||||  ||| |||| |||||| || |||||||    
T  13898475 ctgagtttacgtttttaggcggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcggaaagtttgac 13898553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 175
Target Start/End: Original strand, 14039092 - 14039170
Alignment:
Q  97 ctgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 175  Q
    |||||||||||||||||||   ||||| |||||||||||  ||||||||||  ||| |||| |||||| || |||||||    
T  14039092 ctgagtttacgtttttaggcggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcggaaagtttgac 14039170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 163
Target Start/End: Complemental strand, 32242308 - 32242242
Alignment:
Q  97 ctgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatc 163  Q
    |||||||||| |||| || ||||||||||||||||||||  |||||||||   ||||| ||||||||    
T  32242308 ctgagtttacattttgagataccaaaatcgtgttaactctgaggtaaacttgatttcttgtaaaatc 32242242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 175
Target Start/End: Original strand, 32293912 - 32293989
Alignment:
Q  97 ctgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 175  Q
    |||||||||||||||| ||||||||||||||||||| ||  | |||||||   ||||| ||||||||| || |||||||    
T  32293912 ctgagtttacgttttt-ggtaccaaaatcgtgttaaatctgatgtaaactggatttcttgtaaaatcggaatgtttgac 32293989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 175
Target Start/End: Complemental strand, 3858551 - 3858446
Alignment:
Q  70 aaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaagg 169  Q
    |||| |||||||||||| ||||| | || || |||||||||||| ||  |||||| |||| ||||   ||||||||||  ||| ||||||||||| || |    
T  3858551 aaattgagtgttaactcgccgagttaaccgaatttacgtttttaagtgtcaaaattgtgtcaacttgaaggtaaactcgatttttggtaaaatcggaatg 3858452  T
Q  170 tttgac 175  Q
    ||||||    
T  3858451 tttgac 3858446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 60 - 135
Target Start/End: Complemental strand, 43305111 - 43305035
Alignment:
Q  60 aatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttt-taggtaccaaaatcgtgttaactc 135  Q
    |||||||| ||||||||||||||| ||  |||| |||| |||||| |||||| |||||| |||| | ||||||||||    
T  43305111 aatgttccacaaatcgagtgttaattcgtcgagtttaccgagttttcgttttataggtatcaaactagtgttaactc 43305035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 43825299 - 43825327
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactct 87  Q
    |||||||||||||||||||||||||||||    
T  43825299 caatgttccgcaaatcgagtgttaactct 43825327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 2e-34; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 16438665 - 16438783
Alignment:
Q  57 agcaatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctgg 156  Q
    |||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||| |||||||||||||||   ||||||||||   ||||||    
T  16438665 agcaatgttccgcaaatcgagtgttaactctccgagtttatcgagtttacgtttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctgg 16438764  T
Q  157 taaaatcgaaaggtttgac 175  Q
    |||||||| ||||||||||    
T  16438765 taaaatcggaaggtttgac 16438783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 59 - 237
Target Start/End: Original strand, 2606856 - 2607043
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||| ||||||||||  ||| ||||||||||||||| |||||| ||||||||||| |||||||  ||||||||||  |||||||||    
T  2606856 caatgttccgcaaatcgaatgttaactctttgagtttactgagtttacgtgtttaggcaccaaaatcgttttaactctgaggtaaactcgatttctggta 2606955  T
Q  159 aaatcgaaag---------gtttgaccgagttaaaactcgataaattcgtgtaaaattgaccgaattttacgagtttacatctaaaaa 237  Q
    |||||  |||         ||||||||||||||| |||| ||||| || | |||| | |||||| |||||||||||||||||||||||    
T  2606956 aaatcagaaggtttgatgagtttgaccgagttaacactcaataaactcttataaactcgaccgagttttacgagtttacatctaaaaa 2607043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 7497507 - 7497620
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||| ||||||||||||||| |||   ||||||||||||||||||| ||||||||||||||||  |||||||||| ||||||||||    
T  7497507 caatgttccgcaaatcgaatgttaactctccgagattatcaagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctggta 7497606  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  7497607 aaattggaaggttt 7497620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 30384856 - 30384743
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||| |||||||||||||||||||||||||||| |||| ||||||| |||||||||||| ||||||||||||||||  ||||||| |||||||||| ||    
T  30384856 caatgatccgcaaatcgagtgttaactctccgagattaccgagtttatgtttttaggtacaaaaatcgtgttaactctaaggtaaaatcagtttctgata 30384757  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  30384756 aaattggaaggttt 30384743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 31975791 - 31975675
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||| || ||||||| ||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||  ||||||||||  ||||| |||    
T  31975791 caatgctcggcaaatcaagtgttaactctccgagtttactgagtttatgtgtttaggtaccaaaatcgtgttaactctgaggtaaactcgatttcttgta 31975692  T
Q  159 aaatcgaaaggtttgac 175  Q
    |||||| ||||||||||    
T  31975691 aaatcggaaggtttgac 31975675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 31067841 - 31067954
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||||||||||||||||||| |||||||| |||  |||||||| ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  31067841 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 31067940  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  31067941 aaattggaaggttt 31067954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 14262228 - 14262115
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||||||||||||| |||   ||||||| ||||||||||| ||||||||||||||||  ||||||| ||  |||||||||    
T  14262228 caatgttccgcaaatcgagtgttaactctccgagattatctagtttacttttttaggtacaaaaatcgtgttaactctgaggtaaaatcgatttctggta 14262129  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  14262128 aaattggaaggttt 14262115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 34758871 - 34758758
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||||||||||||| |||||||||||||| |||   ||||||||||||||||||| ||||||||||||||||  ||||||| || ||||||| ||    
T  34758871 caatgttccgcaaatcgagcgttaactctccgagattatcaagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctgata 34758772  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  34758771 aaattggaaggttt 34758758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 4200243 - 4200130
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||||||||||||||||||| |||||||| |||  |||||||| |||||| |||| |||||| |||||||||  ||||||| || ||||||||||    
T  4200243 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaagtacaaaaatcatgttaactctgaggtaaaatcggtttctggta 4200144  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  4200143 aaattggaaggttt 4200130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 31896046 - 31896159
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||| |||||||||||||| |||||||| |||  |||| ||| ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  31896046 caatgttccgtaaatcgagtgttaaatctccgagattatcgagtatacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 31896145  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  31896146 aaattggaaggttt 31896159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 62 - 194
Target Start/End: Complemental strand, 28900965 - 28900842
Alignment:
Q  62 tgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaa 161  Q
    ||||||| |||||||||||||||||||||||         ||||| | ||||||||||||||||||||||||||  ||||||||||  ||||||||||||    
T  28900965 tgttccgtaaatcgagtgttaactctccgag---------tttacatgtttaggtaccaaaatcgtgttaactctgaggtaaactcgatttctggtaaaa 28900875  T
Q  162 tcgaaaggtttgaccgagttaaaactcgataaa 194  Q
    ||| |||||||| ||||||||| ||||| ||||    
T  28900874 tcggaaggtttggccgagttaacactcggtaaa 28900842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 60 - 164
Target Start/End: Original strand, 3000202 - 3000306
Alignment:
Q  60 aatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaa 159  Q
    |||||||| |||||| ||||||||||| ||||| ||||||| ||||||| ||||||||||||||||||||||||||   |||||| ||  ||| ||||||    
T  3000202 aatgttccacaaatcaagtgttaactcgccgagtttactgattttacgtgtttaggtaccaaaatcgtgttaactcgggggtaaattcgatttatggtaa 3000301  T
Q  160 aatcg 164  Q
    |||||    
T  3000302 aatcg 3000306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 1463810 - 1463694
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||| ||||||| |||| |||||  |||| |||| |||||||||| ||||||| | |||| |||||||||||  ||||||||||  |||||||||    
T  1463810 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 1463711  T
Q  159 aaatcgaaaggtttgac 175  Q
    |||||| || |||||||    
T  1463710 aaatcggaaagtttgac 1463694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 6788061 - 6788177
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||| ||||||| |||| |||||  |||| |||| |||||||||| ||||||| | |||| |||||||||||  ||||||||||  |||||||||    
T  6788061 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 6788160  T
Q  159 aaatcgaaaggtttgac 175  Q
    |||||| || |||||||    
T  6788161 aaatcggaaagtttgac 6788177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 10113921 - 10113803
Alignment:
Q  57 agcaatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctgg 156  Q
    ||||||||||| ||||||| |||| |||||  |||| |||| |||||||||| ||||||| | |||| |||||||||||  ||||||||||  ||| |||    
T  10113921 agcaatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtcctaaaaacgtgttaactcggaggtaaactcgttttttgg 10113822  T
Q  157 taaaatcgaaaggtttgac 175  Q
    |||||||| || |||||||    
T  10113821 taaaatcggaaagtttgac 10113803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 110 - 200
Target Start/End: Complemental strand, 33641376 - 33641286
Alignment:
Q  110 tttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgaccgagttaaaactcgataaattcgtg 200  Q
    |||||||| |||||||||||||||||  | ||||||||| ||  ||||||||||  |||||||||||||||||| |||||||||| |||||    
T  33641376 tttaggtatcaaaatcgtgttaactctgatgtaaactcaattaatggtaaaatcataaggtttgaccgagttaacactcgataaactcgtg 33641286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 31535159 - 31535083
Alignment:
Q  99 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 175  Q
    |||||||| |||||||||| |||||| ||||||||||  ||| ||||||  ||||||||||||||||||||||||||    
T  31535159 gagtttacatttttaggtatcaaaattgtgttaactctgaggcaaactcgatttctggtaaaatcgaaaggtttgac 31535083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 99 - 183
Target Start/End: Complemental strand, 7835463 - 7835379
Alignment:
Q  99 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgaccgagttaa 183  Q
    ||||||||||||||||||  ||||| |||||||| ||  |||||||||| |||| |||| |||||| || |||||||||||||||    
T  7835463 gagtttacgtttttaggtggcaaaaacgtgttaagtcggaggtaaactcggtttttggtgaaatcggaaagtttgaccgagttaa 7835379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 97 - 163
Target Start/End: Original strand, 13461372 - 13461438
Alignment:
Q  97 ctgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatc 163  Q
    ||||||||||||||||| ||| ||||||||||| |||||  |||||||||| |||| ||||||||||    
T  13461372 ctgagtttacgtttttatgtatcaaaatcgtgtcaactcggaggtaaactcggtttttggtaaaatc 13461438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 59 - 125
Target Start/End: Original strand, 34773807 - 34773872
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatc 125  Q
    ||||||||||||||||||||||||| |||||||| ||| |||||||||  |||||||||| ||||||    
T  34773807 caatgttccgcaaatcgagtgttaaatctccgagattattgagtttac-attttaggtacaaaaatc 34773872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 8779680 - 8779604
Alignment:
Q  99 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 175  Q
    ||||||||||||||||||  ||||| |||||||||||  |||||||||| |||| |||| |||||| || |||||||    
T  8779680 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgac 8779604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 31996347 - 31996271
Alignment:
Q  99 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 175  Q
    ||||||||||||||||||  ||||| |||||||||||  ||||||||||  ||| |||| |||||| || |||||||    
T  31996347 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcggaaagtttgac 31996271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 100 - 175
Target Start/End: Original strand, 21199556 - 21199631
Alignment:
Q  100 agtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 175  Q
    |||||||||||||||||  ||||| |||||||||||  ||||||||||  ||| |||| |||||| || |||||||    
T  21199556 agtttacgtttttaggtggcaaaaccgtgttaactccaaggtaaactcgatttttggtgaaatcggaaagtttgac 21199631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 2e-34; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 59 - 169
Target Start/End: Complemental strand, 1460938 - 1460828
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||||||||  ||| |||| |||||||||||||||||||| ||||| ||||||||||| |||||||||| ||||||||||    
T  1460938 caatgttccgcaaatcgagtgttaactctttgagattaccgagtttacgtttttaggtacaaaaattgtgttaactcagaggtaaactcggtttctggta 1460839  T
Q  159 aaatcgaaagg 169  Q
    |||||| ||||    
T  1460838 aaatcggaagg 1460828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 4240258 - 4240145
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||||||||| |||||||||||||| ||| |||| |||||||||||||||||| | ||||||||||||||||  |||||||||| ||||||||||    
T  4240258 caatgttccgcaaattgagtgttaactctctgagattaccgagtttacgtttttaggtgcaaaaatcgtgttaactctgaggtaaactccgtttctggta 4240159  T
Q  159 aaatcgaaaggttt 172  Q
    |||||| |||||||    
T  4240158 aaatcggaaggttt 4240145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 4550050 - 4549937
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  4550050 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgtgtttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 4549951  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  4549950 aaattggaaggttt 4549937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 13926341 - 13926454
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  13926341 caatgttccgcaaatcgagtgttaactctccgagattatcgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 13926440  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  13926441 aaattggaaggttt 13926454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 37014264 - 37014377
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||| |||||||||||||||||||||||||| |||| |||||||| ||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  37014264 caatgtttcgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 37014363  T
Q  159 aaatcgaaaggttt 172  Q
    |||| |||||||||    
T  37014364 aaattgaaaggttt 37014377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 59 - 213
Target Start/End: Original strand, 34218430 - 34218584
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||| |||||||||| |||||||||| ||| ||| ||||  ||||||||||||||| ||||||||||||||||| ||  ||||||| || ||||||| ||    
T  34218430 caatattccgcaaattgagtgttaacactctgagtttaccaagtttacgtttttagataccaaaatcgtgttaattcgaaggtaaattcggtttctgcta 34218529  T
Q  159 aaatcgaaaggtttgaccgagttaaaactcgataaattcgtgtaaaattgaccga 213  Q
    |||||  |||||||||||||||||| ||||  |||||||||||||| | ||||||    
T  34218530 aaatcagaaggtttgaccgagttaatactcagtaaattcgtgtaaactcgaccga 34218584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 56 - 175
Target Start/End: Complemental strand, 16548988 - 16548869
Alignment:
Q  56 aagcaatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctg 155  Q
    ||||||||||||  |||||||||||||||||   ||| |||  ||||||||||||||||||||||||||||||| |||||  ||||||||||| ||||||    
T  16548988 aagcaatgttccataaatcgagtgttaactcattgagtttatcgagtttacgtttttaggtaccaaaatcgtgtcaactcggaggtaaactcaatttctg 16548889  T
Q  156 gtaaaatcgaaaggtttgac 175  Q
    |||||||||||| |||||||    
T  16548888 gtaaaatcgaaatgtttgac 16548869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 5949522 - 5949634
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||| ||||||||||||| ||| | ||||||||||||||||||| ||||||||||||||||  ||||||| || ||||||||||    
T  5949522 caatgttccgcaaatcgagtattaactctccgagatta-tcagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 5949620  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  5949621 aaattggaaggttt 5949634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 60 - 172
Target Start/End: Complemental strand, 40013496 - 40013384
Alignment:
Q  60 aatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaa 159  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||| |||||| |||  ||||||||||||||||  ||||||| || |||||||||||    
T  40013496 aatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaagtataaaaatcgtgttaactctgaggtaaaatcggtttctggtaa 40013397  T
Q  160 aatcgaaaggttt 172  Q
    ||| | |||||||    
T  40013396 aattggaaggttt 40013384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 70 - 175
Target Start/End: Complemental strand, 29716920 - 29716815
Alignment:
Q  70 aaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaagg 169  Q
    |||||||||||||||||||| || |||| ||||||||||||||||||| |||||||||||||||||  |||||||||   ||||||||||||||  ||||    
T  29716920 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaacttgatttctggtaaaatcagaagg 29716821  T
Q  170 tttgac 175  Q
    ||||||    
T  29716820 tttgac 29716815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 39852780 - 39852893
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||||||||||||| |||  |||||||| ||||||||||| ||||||||||||||||  ||||||| ||  ||| |||||    
T  39852780 caatgttccgcaaatcgagtgttaactctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcgatttttggta 39852879  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  39852880 aaattggaaggttt 39852893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 5651327 - 5651211
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||||| || |||| |||  || ||||||| ||||||||||||||||||||||||||  ||||||||||  ||||||||     
T  5651327 caatgttccgcaaatcgagtgttaacacttcgagtttatcgattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtg 5651228  T
Q  159 aaatcgaaaggtttgac 175  Q
    |||| |||| |||||||    
T  5651227 aaattgaaaagtttgac 5651211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 61 - 177
Target Start/End: Complemental strand, 15672819 - 15672703
Alignment:
Q  61 atgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaa 160  Q
    ||||||| |||||| ||||||||||| ||||| |||||||||||| |||||||||||| |||||||||| |||||| || ||||||   ||| |||||||    
T  15672819 atgttccacaaatcaagtgttaactcgccgagtttactgagtttatgtttttaggtactaaaatcgtgtcaactcaaagataaacttgatttatggtaaa 15672720  T
Q  161 atcgaaaggtttgaccg 177  Q
    |||| || |||||||||    
T  15672719 atcggaatgtttgaccg 15672703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 13999886 - 13999773
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||||||||||||||||||| |||||||| |||  ||||| || ||||||||||| |||||||||||||||   || |||| || ||||||||||    
T  13999886 caatgttccgcaaatcgagtgttaaatctccgagattatggagttgacatttttaggtacaaaaatcgtgttaactttgagataaaatcggtttctggta 13999787  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  13999786 aaattggaaggttt 13999773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 7125305 - 7125189
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||| ||||||| |||| |||||  |||| |||| |||||||||| ||||||| | |||| |||||||||||  ||||||||||  |||||||||    
T  7125305 caatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggta 7125206  T
Q  159 aaatcgaaaggtttgac 175  Q
    |||||| || |||||||    
T  7125205 aaatcggaaagtttgac 7125189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 55 - 175
Target Start/End: Complemental strand, 37798263 - 37798144
Alignment:
Q  55 aaagcaatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttct 154  Q
    ||||||||||||| ||||||| |||| |||||  |||| |||| |||||||||| ||||  |   |||| |||||||||||| ||||||||||| |||||    
T  37798263 aaagcaatgttccacaaatcg-gtgtcaactcggcgagtttaccgagtttacgtgtttatctgttaaaaacgtgttaactcaaaggtaaactcaatttct 37798165  T
Q  155 ggtaaaatcgaaaggtttgac 175  Q
    ||||||||||||| |||||||    
T  37798164 ggtaaaatcgaaaagtttgac 37798144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 60 - 163
Target Start/End: Original strand, 21489862 - 21489965
Alignment:
Q  60 aatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaa 159  Q
    |||||||| ||||||||||||||||| | | || ||| ||| ||||| |||||||||||||||||||||| || ||  || ||||||   ||||||||||    
T  21489862 aatgttccacaaatcgagtgttaacttttcaagtttattgattttacatttttaggtaccaaaatcgtgtcaattcgaagataaacttgatttctggtaa 21489961  T
Q  160 aatc 163  Q
    ||||    
T  21489962 aatc 21489965  T

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Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 180
Target Start/End: Original strand, 25868800 - 25868881
Alignment:
Q  99 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgaccgagt 180  Q
    ||||||| ||||||||||  ||||| |||||||||||  |||||||||| |||| |||| |||||| || ||||||||||||    
T  25868800 gagtttatgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgaccgagt 25868881  T

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Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 2675174 - 2675098
Alignment:
Q  99 gagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 175  Q
    ||||||||||||||||||  ||||| |||||||||||  ||||||||||  ||| |||| ||||||||| |||||||    
T  2675174 gagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcgaaaagtttgac 2675098  T

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Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 28623307 - 28623191
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||| ||||||| |||| |||||  |||| |||  |||||||||| ||||||| | |||| |||||||||||  || |||||||  |||||||||    
T  28623307 caatgttccacaaatcgcgtgtcaactcagcgagtttatcgagtttacgtgtttaggtgctaaaaacgtgttaactcggagataaactcgatttctggta 28623208  T
Q  159 aaatcgaaaggtttgac 175  Q
    |||| | || |||||||    
T  28623207 aaattgcaaagtttgac 28623191  T

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Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 21238856 - 21238783
Alignment:
Q  102 tttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaatcgaaaggtttgac 175  Q
    ||||||||||||| |  ||||| |||||||||||  |||||||||| |||| ||||||||||| || |||||||    
T  21238856 tttacgtttttagatggcaaaaacgtgttaactcggaggtaaactcggtttttggtaaaatcggaaagtttgac 21238783  T

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Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 135
Target Start/End: Original strand, 29758707 - 29758743
Alignment:
Q  99 gagtttacgtttttaggtaccaaaatcgtgttaactc 135  Q
    ||||||||||||||||||| |||||||||||||||||    
T  29758707 gagtttacgtttttaggtatcaaaatcgtgttaactc 29758743  T

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Target: scaffold1504 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 1276 - 1389
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    ||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||  ||||||| || |||||| |||    
T  1276 caatgttccacaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttcttgta 1375  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  1376 aaattggaaggttt 1389  T

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Target: scaffold0543 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 10934 - 11047
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||| ||||||||||||||||  ||||||| ||  ||| |||||    
T  10934 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaattcgatttttggta 11033  T
Q  159 aaatcgaaaggttt 172  Q
    |||| | |||||||    
T  11034 aaattggaaggttt 11047  T

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Target: scaffold0013 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 59 - 242
Target Start/End: Original strand, 89241 - 89424
Alignment:
Q  59 caatgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggta 158  Q
    |||||||||| ||||||||||||||||||  ||| |||  ||||||| ||||||||||||||| ||||||||||||   ||||||||||  |||||||||    
T  89241 caatgttccgtaaatcgagtgttaactctgtgagtttatcgagtttaagtttttaggtaccaatatcgtgttaacttgaaggtaaactcgatttctggta 89340  T
Q  159 aaatcgaaaggtttgaccgagttaaaactcgataa-attcgtgtaaaattgaccgaattttacgagtttacatctaaaaatataa 242  Q
    |||| | ||||||||| ||||||  | |  | ||| | ||||||||| |  ||||| ||||||||||||||||||||||| ||||    
T  89341 aaattggaaggtttga-cgagtttgatcgagttaacactcgtgtaaactccaccgagttttacgagtttacatctaaaaacataa 89424  T

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Target: scaffold0573 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0573
Description:

Target: scaffold0573; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 62 - 194
Target Start/End: Original strand, 8829 - 8952
Alignment:
Q  62 tgttccgcaaatcgagtgttaactctccgagcttactgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggtaaaa 161  Q
    ||||||| |||||||||||||||||||||||         ||||| | ||||||||||||||||||||||||||  ||||||||||  ||||||||||||    
T  8829 tgttccgtaaatcgagtgttaactctccgag---------tttacatgtttaggtaccaaaatcgtgttaactctgaggtaaactcgatttctggtaaaa 8919  T
Q  162 tcgaaaggtttgaccgagttaaaactcgataaa 194  Q
    ||| |||||||| ||||||||| ||||| ||||    
T  8920 tcggaaggtttggccgagttaacactcggtaaa 8952  T

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Target: scaffold0383 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 16754 - 16708
Alignment:
Q  126 gtgttaactcataggtaaactcagtttctggtaaaatcgaaaggttt 172  Q
    ||||||||||  |||||||||| ||||||||||||||||||||||||    
T  16754 gtgttaactctgaggtaaactcggtttctggtaaaatcgaaaggttt 16708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 20990 - 20944
Alignment:
Q  126 gtgttaactcataggtaaactcagtttctggtaaaatcgaaaggttt 172  Q
    ||||||||||  |||||||||| ||||||||||||||||||||||||    
T  20990 gtgttaactctgaggtaaactcggtttctggtaaaatcgaaaggttt 20944  T

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Target: scaffold0152; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 28811 - 28857
Alignment:
Q  126 gtgttaactcataggtaaactcagtttctggtaaaatcgaaaggttt 172  Q
    ||||||||||  |||||||||| ||||||||||||||||||||||||    
T  28811 gtgttaactctgaggtaaactcggtttctggtaaaatcgaaaggttt 28857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 157
Target Start/End: Complemental strand, 25702 - 25642
Alignment:
Q  97 ctgagtttacgtttttaggtaccaaaatcgtgttaactcataggtaaactcagtttctggt 157  Q
    ||||||||||||||||||||  ||||| |||||||||||  |||||||||| |||| ||||    
T  25702 ctgagtttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggt 25642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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