View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19563_high_38 (Length: 281)
Name: NF19563_high_38
Description: NF19563
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19563_high_38 |
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Alignment Details
Target: chr7 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 19 - 265
Target Start/End: Original strand, 9195787 - 9196035
Alignment:
| Q |
19 |
ttatgatcccgagagcaaaagaactagaaggaaaaaccgacggcaagcaaagtaacgaagacaatcgttgcaaaaaacaacaagaagcatggccaataat |
118 |
Q |
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|||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
9195787 |
ttatgatcccgagagcgaaaggactagaaggaaaaaccgacggcaagcaaagaaacgaagacagtcgttgcaaaaaacaacaagaagcatggccaataat |
9195886 |
T |
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| Q |
119 |
gcagaaacaacgacattgacgatgaacaacaa--gtctaaggagatacgcctgatcatccaagcctaaaaacaatcagcgacaaatggagatcaagacaa |
216 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9195887 |
gcagaaacaacgacattgacgatgaacaacaactgtctaaggagatacgcctgatcatccaagcctaaaaacaatcagcgacaaatggagatcaagacaa |
9195986 |
T |
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| Q |
217 |
aagttattccacttctgcgtgtaaattcgttcactgaaatggatcatga |
265 |
Q |
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||||||||| |||||||| |||||||||||||| |||||||||||||| |
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| T |
9195987 |
aagttattcaacttctgctcgtaaattcgttcaccgaaatggatcatga |
9196035 |
T |
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