View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19563_high_44 (Length: 259)
Name: NF19563_high_44
Description: NF19563
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19563_high_44 |
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Alignment Details
Target: chr6 (Bit Score: 180; Significance: 3e-97; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 21 - 241
Target Start/End: Complemental strand, 2777154 - 2776933
Alignment:
| Q |
21 |
ataacaacaaccaatacaagacattaaacatcaactcctagacatacaagttgttgagacctccaatcatacacattattgagaacaataatttaaacca |
120 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
2777154 |
ataacaacaaccaatacaagacattaaacatcaactcctaaacatacaagttgttgagaccattaatcatacacattattgagaacaataatttaaacca |
2777055 |
T |
|
| Q |
121 |
gtaaactaaatatcaatcccctattgcattaggaatatgaaagtatttcaagcttttcacat--accataagaaaaaccaaggaaaataattcacacttt |
218 |
Q |
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||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| || |
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| T |
2777054 |
gtaaactaaatatcaatcccctattgcattaagaatatgaaagtatttcaagcttttcatatagaccataagaaaaaccaaggaaaataattcacac-tt |
2776956 |
T |
|
| Q |
219 |
cataaataagttctaatagcaat |
241 |
Q |
| |
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||||||||||||||||||||||| |
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| T |
2776955 |
cataaataagttctaatagcaat |
2776933 |
T |
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