View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19563_low_33 (Length: 318)
Name: NF19563_low_33
Description: NF19563
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19563_low_33 |
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Alignment Details
Target: chr4 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 16 - 296
Target Start/End: Complemental strand, 40126278 - 40125998
Alignment:
| Q |
16 |
atggggctactatcgaaggtgacacgagtatttcatgagaatggattatccataacaagaattgagtttggagtagagggtgaagcagcaataggatcat |
115 |
Q |
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| T |
40126278 |
atggggctactatcgaaggtgacacaagtaattcatgagaatggattatccataacaagaattgagtttggagtagagggtgaagcagcaataggatcac |
40126179 |
T |
|
| Q |
116 |
tctatgttacaggttgttcaggtcaagatgtgaatgaaaatatagtagagttgataaaaagagaaattggtgggtcaattgttttggctcaaagttctcc |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40126178 |
tctatgttacaggttgttcaggtcaagatgtgaatgaaaatatagtagagttgataaaaagagaaattggtgggtcaattgttttggctcaaagttctcc |
40126079 |
T |
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| Q |
216 |
atacagggactctcaatcctcatcatccagtaacaatagtagagatgttataccaacattttcttttggaagcatgattcg |
296 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
40126078 |
atacagggactctcaatcctcatcatccagtaacaatagtagagatgttataccaacattttcttttggaggcatgattcg |
40125998 |
T |
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