View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19563_low_41 (Length: 269)
Name: NF19563_low_41
Description: NF19563
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19563_low_41 |
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Alignment Details
Target: chr2 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 126 - 252
Target Start/End: Complemental strand, 2507553 - 2507427
Alignment:
| Q |
126 |
aaattttgtactgataccaccatatagaactgtatcccaagtgacaagataaatgacagaattcgtcagctactcttttgacatagaatccatgttatgc |
225 |
Q |
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| T |
2507553 |
aaattctgtacatataccaccatatagaactgtatcccaagtgacaagataaatgacagaattcgtcagctactcttttgacatagaatccatgttatgc |
2507454 |
T |
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| Q |
226 |
aatatactcagtctttgtggctccact |
252 |
Q |
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||||||||||||||| ||||||||||| |
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| T |
2507453 |
aatatactcagtcttcgtggctccact |
2507427 |
T |
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